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ONTOLOGY REPORT - ANNOTATIONS

Term:ureter development
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Accession:GO:0072189 term browser browse the term
Definition:The process whose specific outcome is the progression of the ureter over time, from its formation to the mature structure. The ureter is a muscular tube that transports urine from the kidney to the urinary bladder or from the Malpighian tubule to the hindgut.

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ureter development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxf1 forkhead box F1 involved_in ISO (PMID:19500772) DFLAT PMID:19500772 NCBI chrNW_004955541:1,341,715...1,345,397
Ensembl chrNW_004955541:1,317,114...1,346,590 		JBrowse link
G Nfia nuclear factor I A acts_upstream_of_or_within ISO (PMID:17530927) MGI PMID:17530927 NCBI chrNW_004955423:27,799,976...28,108,307
Ensembl chrNW_004955423:27,806,873...28,112,268 		JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO (PMID:18371931) BHF-UCL PMID:18371931 NCBI chrNW_004955501:5,799,879...5,837,022
Ensembl chrNW_004955501:5,799,879...5,837,022 		JBrowse link
G Pax2 paired box 2 involved_in ISO (MGI:3833510|PMID:17881463) UniProt PMID:17881463 MGI:3833510 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607 		JBrowse link
G Sox17 SRY-box transcription factor 17 involved_in ISO (PMID:20960469) BHF-UCL PMID:20960469 NCBI chrNW_004955454:13,689,403...13,690,019 JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:20881014) MGI PMID:20881014 NCBI chrNW_004955478:941,684...945,563
Ensembl chrNW_004955478:940,177...945,563 		JBrowse link
G Tbx18 T-box transcription factor 18 involved_in
acts_upstream_of_or_within		 ISO (PMID:26235987)
(PMID:20881014)		 UniProt
MGI		 PMID:20881014 PMID:26235987 NCBI chrNW_004955411:12,194,560...12,232,374
Ensembl chrNW_004955411:12,194,550...12,232,374 		JBrowse link
mesenchymal cell proliferation involved in ureter development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six1 SIX homeobox 1 acts_upstream_of ISO (PMID:20110314) MGI PMID:20110314 NCBI chrNW_004955466:8,961,597...8,966,069
Ensembl chrNW_004955466:8,961,597...8,966,069 		JBrowse link
G Tbx18 T-box transcription factor 18 acts_upstream_of ISO (PMID:20110314) MGI PMID:20110314 NCBI chrNW_004955411:12,194,560...12,232,374
Ensembl chrNW_004955411:12,194,550...12,232,374 		JBrowse link
negative regulation of mesenchymal cell proliferation involved in ureter development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO (PMID:12399320) UniProt PMID:12399320 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303 		JBrowse link
negative regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in ISO (MGI:2388350|PMID:12399320) UniProt PMID:12399320 MGI:2388350 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
positive regulation of mesenchymal cell proliferation involved in ureter development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in ISO (MGI:2388350|PMID:12399320) UniProt PMID:12399320 MGI:2388350 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO (PMID:20110314) MGI PMID:20110314 NCBI chrNW_004955466:8,961,597...8,966,069
Ensembl chrNW_004955466:8,961,597...8,966,069 		JBrowse link
G Tbx18 T-box transcription factor 18 acts_upstream_of_or_within ISO (PMID:20110314) MGI PMID:20110314 NCBI chrNW_004955411:12,194,560...12,232,374
Ensembl chrNW_004955411:12,194,550...12,232,374 		JBrowse link
positive regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in ISO (MGI:2388350|PMID:12399320) UniProt PMID:12399320 MGI:2388350 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
ureter maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within ISO (PMID:21521737) MGI PMID:21521737 NCBI chrNW_004955450:16,406,578...16,453,048
Ensembl chrNW_004955450:16,406,436...16,453,180 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO (PMID:21521737) MGI PMID:21521737 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744 		JBrowse link
G Pax2 paired box 2 involved_in ISO (MGI:3833510|PMID:17881463) UniProt PMID:17881463 MGI:3833510 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607 		JBrowse link
G Ret ret proto-oncogene acts_upstream_of_or_within ISO (PMID:21521737) MGI PMID:21521737 NCBI chrNW_004955546:1,221,995...1,252,147
Ensembl chrNW_004955546:1,221,995...1,253,946 		JBrowse link
ureter morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO (MGI:3710018|PMID:17442697) UniProt PMID:17442697 MGI:3710018 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303 		JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO (PMID:21731775) MGI PMID:21731775 NCBI chrNW_004955431:22,192,446...22,199,141
Ensembl chrNW_004955431:22,192,446...22,199,279 		JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO (PMID:21731775) MGI PMID:21731775 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744 		JBrowse link
G Lhx1 LIM homeobox 1 acts_upstream_of_or_within ISO (PMID:21731775) MGI PMID:21731775 NCBI chrNW_004955451:1,037,936...1,048,501
Ensembl chrNW_004955451:1,037,825...1,048,501 		JBrowse link
G Lzts2 leucine zipper tumor suppressor 2 acts_upstream_of_or_within ISO (PMID:21949185) MGI PMID:21949185 NCBI chrNW_004955485:9,182,984...9,187,144
Ensembl chrNW_004955485:9,181,014...9,191,651 		JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO (PMID:21731775) MGI PMID:21731775 NCBI chrNW_004955448:18,259,847...18,542,085
Ensembl chrNW_004955448:18,259,083...18,439,646 		JBrowse link
G Pax2 paired box 2 involved_in
acts_upstream_of_or_within		 ISO (MGI:48612|PMID:1723950)
(PMID:21731775)		 UniProt
MGI		 PMID:1723950 PMID:21731775 MGI:48612 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607 		JBrowse link
G Sox8 SRY-box transcription factor 8 acts_upstream_of_or_within ISO (PMID:21212101) MGI PMID:21212101 NCBI chrNW_004955442:16,236,286...16,241,093
Ensembl chrNW_004955442:16,236,232...16,241,152 		JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:21212101) MGI PMID:21212101 NCBI chrNW_004955478:941,684...945,563
Ensembl chrNW_004955478:940,177...945,563 		JBrowse link
ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO (PMID:20110314) MGI PMID:20110314 NCBI chrNW_004955466:8,961,597...8,966,069
Ensembl chrNW_004955466:8,961,597...8,966,069 		JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:20881014) MGI PMID:20881014 NCBI chrNW_004955478:941,684...945,563
Ensembl chrNW_004955478:940,177...945,563 		JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 involved_in ISO (MGI:3806378|PMID:18776146) UniProt PMID:18776146 MGI:3806378 NCBI chrNW_004955468:6,448,167...6,669,706
Ensembl chrNW_004955468:6,448,167...6,519,391 		JBrowse link
ureter urothelium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISO (MGI:3826342|PMID:18835385) UniProt PMID:18835385 MGI:3826342 NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISO (MGI:5285125|PMID:21512138) UniProt PMID:21512138 MGI:5285125 NCBI chrNW_004955478:941,684...945,563
Ensembl chrNW_004955478:940,177...945,563 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12346
    multicellular organismal process 6182
      multicellular organism development 4550
        tube development 1151
          ureter development 20
            mesenchymal cell proliferation involved in ureter development + 4
            ureter maturation 4
            ureter morphogenesis + 9
            ureter smooth muscle development + 4
            ureter urothelium development + 2
Path 2
Term Annotations click to browse term
  biological_process 12346
    developmental process 5853
      anatomical structure development 5540
        multicellular organism development 4550
          system development 3953
            renal system development 380
              ureter development 20
                mesenchymal cell proliferation involved in ureter development + 4
                ureter maturation 4
                ureter morphogenesis + 9
                ureter smooth muscle development + 4
                ureter urothelium development + 2
paths to the root