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ONTOLOGY REPORT - ANNOTATIONS


Term:ureter development
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Accession:GO:0072189 term browser browse the term
Definition:The process whose specific outcome is the progression of the ureter over time, from its formation to the mature structure. The ureter is a muscular tube that transports urine from the kidney to the urinary bladder or from the Malpighian tubule to the hindgut.



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ureter development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxf1 forkhead box F1 involved_in ISO (PMID:19500772) RGD PMID:19500772 NCBI chr19:49,153,729...49,157,741
Ensembl chr19:49,153,699...49,157,738
JBrowse link
G Nfia nuclear factor I/A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2449024 (MGI:3715397|PMID:17530927)
Ensembl
RGD
PMID:17530927 GO_REF:0000107 MGI:3715397 NCBI chr 5:112,436,655...112,781,878
Ensembl chr 5:112,436,644...112,775,885
JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO (PMID:18371931) RGD PMID:18371931 NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383
JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3833510|PMID:17881463)
UniProt
RGD
PMID:17881463 GO_REF:0000024 MGI:3833510 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
JBrowse link
G Sox17 SRY-box transcription factor 17 involved_in ISO (PMID:20960469) RGD PMID:20960469 NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228
JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:1923615 (MGI:4848001|PMID:20881014) RGD PMID:20881014 MGI:4848001 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Tbx18 T-box transcription factor 18 involved_in
acts_upstream_of_or_within
ISO (PMID:26235987)
MGI:98371 (MGI:4848001|PMID:20881014)
RGD PMID:20881014 PMID:26235987 MGI:4848001 NCBI chr 8:88,652,054...88,680,081
Ensembl chr 8:88,652,054...88,680,058
JBrowse link
BMP signaling pathway involved in ureter morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:3710018|PMID:17442697)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:17442697 GO_REF:0000024 GO_REF:0000107 MGI:3710018 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
mesenchymal cell proliferation involved in ureter development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:17442697)
Ensembl
RGD
PMID:17442697 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
negative regulation of mesenchymal cell proliferation involved in ureter development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO
ISS
IEA
(PMID:12399320)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:12399320 GO_REF:0000024 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
negative regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:2388350|PMID:12399320)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12399320 GO_REF:0000024 GO_REF:0000107 MGI:2388350 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
positive regulation of mesenchymal cell proliferation involved in ureter development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:2388350|PMID:12399320)
UniProt
Ensembl
RGD
PMID:12399320 GO_REF:0000024 GO_REF:0000107 MGI:2388350 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:1923615 (MGI:4437379|PMID:20110314) RGD PMID:20110314 MGI:4437379 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
JBrowse link
G Tbx18 T-box transcription factor 18 acts_upstream_of_or_within ISO MGI:102780 (MGI:4437379|PMID:20110314) RGD PMID:20110314 MGI:4437379 NCBI chr 8:88,652,054...88,680,081
Ensembl chr 8:88,652,054...88,680,058
JBrowse link
positive regulation of ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:2388350|PMID:12399320)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:12399320 GO_REF:0000024 GO_REF:0000107 MGI:2388350 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
ureter epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3710018|PMID:17442697)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17442697 GO_REF:0000024 GO_REF:0000107 MGI:3710018 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
ureter maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO MGI:1857891 (MGI:4949948|PMID:21521737) RGD PMID:21521737 MGI:4949948 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107
JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO MGI:3719568 (MGI:4949948|PMID:21521737) RGD PMID:21521737 MGI:4949948 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
G Pax2 paired box 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3833510|PMID:17881463)
UniProt
RGD
PMID:17881463 GO_REF:0000024 MGI:3833510 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
JBrowse link
G Ret ret proto-oncogene acts_upstream_of_or_within ISO MGI:2136894 (MGI:4949948|PMID:21521737) RGD PMID:21521737 MGI:4949948 NCBI chr 4:151,325,969...151,368,176
Ensembl chr 4:151,326,431...151,368,176
JBrowse link
ureter morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO MGI:95457|MGI:95663|MGI:97486|MGI:99783 (MGI:5085923|PMID:21731775) RGD PMID:21731775 MGI:5085923 NCBI chr 1:258,626,584...258,633,594
Ensembl chr 1:258,626,584...258,633,594
JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO MGI:95388|MGI:95457|MGI:97486|MGI:99783 (MGI:5085923|PMID:21731775) RGD PMID:21731775 MGI:5085923 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
G Lhx1 LIM homeobox 1 acts_upstream_of_or_within ISO MGI:95388|MGI:95457|MGI:95663|MGI:97486 (MGI:5085923|PMID:21731775) RGD PMID:21731775 MGI:5085923 NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
JBrowse link
G Lzts2 leucine zipper tumor suppressor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5302222 (MGI:5297624|PMID:21949185)
Ensembl
RGD
PMID:21949185 GO_REF:0000107 MGI:5297624 NCBI chr 1:243,876,665...243,888,489
Ensembl chr 1:243,880,022...243,888,423
JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO MGI:95388|MGI:95663|MGI:97486|MGI:99783 (MGI:5085923|PMID:21731775) RGD PMID:21731775 MGI:5085923 NCBI chr 2:112,909,353...113,464,583
Ensembl chr 2:112,909,321...113,464,590
JBrowse link
G Pax2 paired box 2 acts_upstream_of_or_within ISO MGI:95388|MGI:95457|MGI:95663|MGI:99783 (MGI:5085923|PMID:21731775), (PMID:1723950) RGD PMID:1723950 PMID:21731775 MGI:5085923 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
JBrowse link
G Sox8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:98371 (MGI:4939090|PMID:21212101)
UniProt
RGD
PMID:21212101 GO_REF:0000024 MGI:4939090 NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818
JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:98370 (MGI:4939090|PMID:21212101) RGD PMID:21212101 MGI:4939090 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
ureter smooth muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3710018|PMID:17442697)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17442697 GO_REF:0000024 GO_REF:0000107 MGI:3710018 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Six1 SIX homeobox 1 acts_upstream_of_or_within ISO MGI:2655195 (MGI:4437379|PMID:20110314) RGD PMID:20110314 MGI:4437379 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:2176205|MGI:2385468 (MGI:4848001|PMID:20881014) RGD PMID:20881014 MGI:4848001 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 involved_in ISO (MGI:3806378|PMID:18776146) RGD PMID:18776146 MGI:3806378 NCBI chr 1:89,386,732...89,460,719
Ensembl chr 1:89,381,858...89,460,874
JBrowse link
ureter urothelium development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3826342|PMID:18835385)
UniProt
RGD
PMID:18835385 GO_REF:0000024 MGI:3826342 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817
JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO (PMID:21512138) RGD PMID:21512138 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19834
    developmental process 6965
      anatomical structure development 6376
        animal organ development 4194
          ureter development 20
            mesenchymal cell proliferation involved in ureter development + 4
            ureter maturation 4
            ureter morphogenesis + 9
            ureter smooth muscle development + 5
            ureter urothelium development + 3
Path 2
Term Annotations click to browse term
  biological_process 19834
    developmental process 6965
      anatomical structure development 6376
        multicellular organism development 5800
          system development 5439
            urogenital system development 445
              renal system development 397
                ureter development 20
                  mesenchymal cell proliferation involved in ureter development + 4
                  ureter maturation 4
                  ureter morphogenesis + 9
                  ureter smooth muscle development + 5
                  ureter urothelium development + 3
paths to the root