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ONTOLOGY REPORT - ANNOTATIONS


Term:nephron tubule epithelial cell differentiation
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Accession:GO:0072160 term browser browse the term
Definition:The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the cells of the nephron tubule as it progresses from its formation to the mature state.



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nephron tubule epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2c myocyte enhancer factor 2C involved_in IMP (MGI:4440396|PMID:20181743) UniProt PMID:20181743 MGI:4440396 NCBI chr13:83,504,017...83,667,079
Ensembl chr13:83,504,034...83,667,080
JBrowse link
G Mtss1 MTSS I-BAR domain containing 1 involved_in IMP (MGI:4440396|PMID:20181743) UniProt PMID:20181743 MGI:4440396 NCBI chr15:58,941,234...59,083,956
Ensembl chr15:58,941,234...59,082,005
JBrowse link
negative regulation of nephron tubule epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in IMP (MGI:3697513|PMID:16790474) UniProt PMID:16790474 MGI:3697513 NCBI chr12:9,574,442...9,581,500
Ensembl chr12:9,570,116...9,581,500
JBrowse link
positive regulation of nephron tubule epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd24a CD24a antigen involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:43,579,169...43,584,265
Ensembl chr10:43,578,284...43,584,265
JBrowse link
G Lhx1 LIM homeobox protein 1 involved_in IMP (MGI:3613206|PMID:16216236) UniProt PMID:16216236 MGI:3613206 NCBI chr11:84,517,975...84,525,534
Ensembl chr11:84,518,284...84,525,535
JBrowse link
G Prom1 prominin 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:43,993,621...44,102,047
Ensembl chr 5:43,993,620...44,102,032
JBrowse link
regulation of metanephric nephron tubule epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fat4 FAT atypical cadherin 4 acts_upstream_of_or_within IMP (MGI:5514437|PMID:23974041) MGI PMID:23974041 MGI:5514437 NCBI chr 3:38,884,667...39,011,992
Ensembl chr 3:38,886,940...39,011,985
JBrowse link
G Lif leukemia inhibitory factor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:4,257,568...4,272,514
Ensembl chr11:4,257,557...4,272,514
JBrowse link
G Pax2 paired box 2 involved_in IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr19:44,746,601...44,838,269
Ensembl chr19:44,756,045...44,837,871
JBrowse link
G Pax8 paired box 8 involved_in IMP (MGI:3704067|PMID:17314325) UniProt PMID:17314325 MGI:3704067 NCBI chr 2:24,420,551...24,475,599
Ensembl chr 2:24,420,560...24,475,599
JBrowse link
G Wwtr1 WW domain containing transcription regulator 1 acts_upstream_of_or_within IGI (MGI:5514437|PMID:23974041) MGI PMID:23974041 MGI:5514437 NCBI chr 3:57,455,644...57,575,910
Ensembl chr 3:57,455,649...57,575,910
JBrowse link
G Yap1 yes-associated protein 1 acts_upstream_of_or_within IGI (MGI:5514437|PMID:23974041) MGI PMID:23974041 MGI:5514437 NCBI chr 9:7,931,999...8,004,638
Ensembl chr 9:7,931,999...8,004,596
JBrowse link
regulation of nephron tubule epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin (cadherin associated protein), beta 1 involved_in IMP (MGI:3822373|PMID:19112489) UniProt PMID:19112489 MGI:3822373 NCBI chr 9:120,933,400...120,960,507
Ensembl chr 9:120,929,216...120,960,507
JBrowse link
G Gata3 GATA binding protein 3 involved_in IMP (MGI:3822373|PMID:19112489) UniProt PMID:19112489 MGI:3822373 NCBI chr 2:9,857,078...9,887,953
Ensembl chr 2:9,857,078...9,890,034
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28627
    developmental process 7102
      anatomical structure development 6486
        tube development 1262
          renal tubule development 111
            nephron tubule development 105
              nephron tubule epithelial cell differentiation 14
                mesonephric nephron tubule epithelial cell differentiation + 0
                metanephric nephron tubule epithelial cell differentiation + 6
                negative regulation of nephron tubule epithelial cell differentiation + 1
                positive regulation of nephron tubule epithelial cell differentiation 3
                pronephric nephron tubule epithelial cell differentiation 0
                regulation of nephron tubule epithelial cell differentiation + 12
Path 2
Term Annotations click to browse term
  biological_process 28627
    developmental process 7102
      anatomical structure development 6486
        multicellular organism development 5853
          system development 5484
            urogenital system development 443
              renal system development 395
                kidney development 381
                  kidney epithelium development 162
                    nephron epithelium development 125
                      nephron tubule development 105
                        nephron tubule epithelial cell differentiation 14
                          mesonephric nephron tubule epithelial cell differentiation + 0
                          metanephric nephron tubule epithelial cell differentiation + 6
                          negative regulation of nephron tubule epithelial cell differentiation + 1
                          positive regulation of nephron tubule epithelial cell differentiation 3
                          pronephric nephron tubule epithelial cell differentiation 0
                          regulation of nephron tubule epithelial cell differentiation + 12
paths to the root