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ONTOLOGY REPORT - ANNOTATIONS


Term:epithelial cell fate commitment
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Accession:GO:0072148 term browser browse the term
Definition:The process in which the developmental fate of a cell becomes restricted such that it will develop into an epithelial cell.


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epithelial cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3803178 (MGI:5426506|PMID:22387004)
Ensembl
RGD
PMID:22387004 GO_REF:0000107 MGI:5426506 NCBI chr  X:62,363,757...62,376,139
Ensembl chr  X:62,363,757...62,376,143
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:1931521 (MGI:4352984|PMID:19407216) RGD PMID:19407216 MGI:4352984 NCBI chr14:82,272,322...82,287,739
Ensembl chr14:82,273,070...82,287,706
JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO MGI:3053826|MGI:3526854 (MGI:3696911|PMID:16940177) RGD PMID:16940177 MGI:3696911 NCBI chr15:46,386,703...46,458,679
Ensembl chr15:46,386,712...46,432,965
JBrowse link
arterial endothelial cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in ISO (MGI:3056004|PMID:15466160) RGD PMID:15466160 MGI:3056004 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
auditory receptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in NAS PMID:10878608 UniProt PMID:10878608 RGD:8553270 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
JBrowse link
G Jag2 jagged canonical Notch ligand 2 involved_in ISS
ISO
IEA
PMID:10080181
(MGI:1332721|PMID:10080181)
GO_REF:0000107
RGD
Ensembl
PMID:10080181, PMID:10080181 GO_REF:0000107 MGI:1332721, RGD:8553713 NCBI chr 6:137,711,144...137,733,331
Ensembl chr 6:137,711,155...137,733,026
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:3044585|MGI:3046196 (MGI:3833041|PMID:19154718) RGD PMID:19154718 MGI:3833041 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO MGI:3046196|MGI:3583755 (MGI:3833041|PMID:19154718) RGD PMID:19154718 MGI:3833041 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
auditory receptor cell fate determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:3611666|PMID:16407553) RGD PMID:16407553 MGI:3611666 NCBI chr 4:95,498,003...95,500,098
Ensembl chr 4:95,498,003...95,500,089
JBrowse link
auditory receptor cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atoh1 atonal bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:2155983 (MGI:1339217|PMID:10364557) RGD PMID:10364557 MGI:1339217 NCBI chr 4:95,498,003...95,500,098
Ensembl chr 4:95,498,003...95,500,089
JBrowse link
blood vessel endothelial cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in ISO UniProtKB:P52800 (MGI:3056004|PMID:15466160) RGD PMID:15466160 MGI:3056004 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
endocardial cushion cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in ISO
IEA
(PMID:19506109)
GO_REF:0000107
RGD
Ensembl
PMID:19506109 GO_REF:0000107 NCBI chr 3:44,432,476...44,539,680
Ensembl chr 3:44,432,471...44,522,930
JBrowse link
endothelial cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa13 homeo box A13 acts_upstream_of_or_within ISO MGI:2152356 (MGI:3797428|PMID:18483557) RGD PMID:18483557 MGI:3797428 NCBI chr 4:82,313,383...82,315,550
Ensembl chr 4:82,228,017...82,229,397
JBrowse link
endothelial tip cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:5466218|PMID:22282195)
Ensembl
UniProt
RGD
PMID:22282195 GO_REF:0000024 GO_REF:0000107 MGI:5466218 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
JBrowse link
lymphatic endothelial cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 involved_in ISO (PMID:18815287) RGD PMID:18815287 NCBI chr 1:131,447,671...131,465,749
Ensembl chr 1:131,448,447...131,460,473
JBrowse link
G Pdpn podoplanin involved_in ISS
ISO
GO_REF:0000024
(MGI:4453945|PMID:20110424)
UniProt
RGD
PMID:20110424 GO_REF:0000024 MGI:4453945 NCBI chr 5:161,947,137...161,981,441
Ensembl chr 5:161,947,137...161,981,441
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:18815287) RGD PMID:18815287 NCBI chr13:108,382,536...108,444,107
Ensembl chr13:108,382,399...108,443,294
JBrowse link
Notch signaling pathway involved in arterial endothelial cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3847069|PMID:19144989)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:19144989 GO_REF:0000024 GO_REF:0000107 MGI:3847069 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
JBrowse link
pancreatic A cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neurod1 neuronal differentiation 1 acts_upstream_of_or_within ISO MGI:97347 (MGI:3768695|PMID:17988662) RGD PMID:17988662 MGI:3768695 NCBI chr 3:66,414,314...66,417,617
Ensembl chr 3:66,414,308...66,417,741
JBrowse link
G Nkx2-2 NK2 homeobox 2 acts_upstream_of_or_within ISO MGI:1339708|MGI:1932100 (MGI:3703458|PMID:17202186), (MGI:3768695|PMID:17988662) RGD PMID:17202186 PMID:17988662 MGI:3703458 MGI:3768695 NCBI chr 3:141,408,460...141,419,083
Ensembl chr 3:141,408,798...141,411,170
JBrowse link
pancreatic PP cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neurod1 neuronal differentiation 1 acts_upstream_of_or_within ISO MGI:97347 (MGI:3768695|PMID:17988662) RGD PMID:17988662 MGI:3768695 NCBI chr 3:66,414,314...66,417,617
Ensembl chr 3:66,414,308...66,417,741
JBrowse link
G Nkx2-2 NK2 homeobox 2 acts_upstream_of_or_within ISO MGI:1339708 (MGI:3768695|PMID:17988662) RGD PMID:17988662 MGI:3768695 NCBI chr 3:141,408,460...141,419,083
Ensembl chr 3:141,408,798...141,411,170
JBrowse link
regulation of inner ear auditory receptor cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esrp1 epithelial splicing regulatory protein 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5915403|PMID:29107558)
UniProt
RGD
PMID:29107558 GO_REF:0000024 MGI:5915403 NCBI chr 5:24,576,988...24,631,758
Ensembl chr 5:24,576,991...24,631,698
JBrowse link
Sertoli cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rara retinoic acid receptor, alpha involved_in ISO (MGI:5284770|PMID:17905941) RGD PMID:17905941 MGI:5284770 NCBI chr10:86,838,819...86,884,224
Ensembl chr10:86,860,685...86,884,210
JBrowse link
type B pancreatic cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx2-2 NK2 homeobox 2 acts_upstream_of_or_within ISO MGI:1932100 (MGI:3703458|PMID:17202186), (MGI:3768695|PMID:17988662) RGD PMID:17202186 PMID:17988662 MGI:3703458 MGI:3768695 NCBI chr 3:141,408,460...141,419,083
Ensembl chr 3:141,408,798...141,411,170
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19612
    cellular process 18457
      cellular developmental process 4461
        cell fate commitment 281
          epithelial cell fate commitment 17
            Sertoli cell fate commitment 1
            auditory receptor cell fate commitment + 6
            endothelial cell fate commitment + 7
            glomerular parietal epithelial cell fate commitment + 0
            glomerular visceral epithelial cell fate commitment + 0
            granulosa cell fate commitment 0
            leading edge cell fate commitment + 0
            pancreatic A cell fate commitment 2
            pancreatic D cell fate commitment 0
            pancreatic PP cell fate commitment 2
            type B pancreatic cell fate commitment 1
Path 2
Term Annotations click to browse term
  biological_process 19612
    developmental process 6792
      anatomical structure development 6265
        tissue development 2070
          epithelium development 1273
            epithelial cell differentiation 712
              epithelial cell fate commitment 17
                Sertoli cell fate commitment 1
                auditory receptor cell fate commitment + 6
                endothelial cell fate commitment + 7
                glomerular parietal epithelial cell fate commitment + 0
                glomerular visceral epithelial cell fate commitment + 0
                granulosa cell fate commitment 0
                leading edge cell fate commitment + 0
                pancreatic A cell fate commitment 2
                pancreatic D cell fate commitment 0
                pancreatic PP cell fate commitment 2
                type B pancreatic cell fate commitment 1
paths to the root