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ONTOLOGY REPORT - ANNOTATIONS


Term:epithelial cell fate commitment
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Accession:GO:0072148 term browser browse the term
Definition:The process in which the developmental fate of a cell becomes restricted such that it will develop into an epithelial cell.



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epithelial cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3803178 (PMID:22387004)
Ensembl
RGD
PMID:22387004 GO_REF:0000107 NCBI chr  X:58,016,233...58,028,149
Ensembl chr  X:58,016,233...58,028,142
JBrowse link
G Chrd chordin involved_in ISO (PMID:11969257) RGD PMID:11969257 NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:1931521 (PMID:19407216) RGD PMID:19407216 NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO MGI:3053826|MGI:3526854 (PMID:16940177) RGD PMID:16940177 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO MGI:2447212|MGI:2684314 (PMID:16107537) RGD PMID:16107537 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Sostdc1 sclerostin domain containing 1 acts_upstream_of ISO MGI:3604658 (PMID:22509524) RGD PMID:22509524 NCBI chr 6:53,051,336...53,055,510
Ensembl chr 6:53,051,354...53,055,579
JBrowse link
G Spdef SAM pointed domain containing ets transcription factor acts_upstream_of ISO MGI:4398888 (PMID:19759516) RGD PMID:19759516 NCBI chr20:5,771,440...5,785,893
Ensembl chr20:5,771,441...5,785,893
JBrowse link
arterial endothelial cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in ISO (MGI:3056004|PMID:15466160) RGD PMID:15466160 MGI:3056004 NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
JBrowse link
blood vessel endothelial cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in ISO UniProtKB:P52800 (MGI:3056004|PMID:15466160) RGD PMID:15466160 MGI:3056004 NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
JBrowse link
endocardial cushion cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in ISO
IEA
(PMID:19506109)
GO_REF:0000107
RGD
Ensembl
PMID:19506109 GO_REF:0000107 NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
JBrowse link
endothelial cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoxa13 homeo box A13 acts_upstream_of_or_within ISO MGI:2152356 (PMID:18483557) RGD PMID:18483557 NCBI chr 4:81,358,956...81,361,091
Ensembl chr 4:81,358,956...81,361,091
JBrowse link
endothelial tip cell fate specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:5466218|PMID:22282195)
Ensembl
UniProt
RGD
PMID:22282195 GO_REF:0000024 GO_REF:0000107 MGI:5466218 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
JBrowse link
G Flvcr2 FLVCR choline and putative heme transporter 2 acts_upstream_of_or_within ISO (PMID:32369453) RGD PMID:32369453 NCBI chr 6:105,408,355...105,472,355
Ensembl chr 6:105,408,339...105,472,353
JBrowse link
lymphatic endothelial cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr2f2 nuclear receptor subfamily 2, group F, member 2 involved_in ISO (PMID:18815287) RGD PMID:18815287 NCBI chr 1:124,008,282...124,022,521
Ensembl chr 1:124,009,181...124,022,031
JBrowse link
G Pdpn podoplanin involved_in ISS
ISO
GO_REF:0000024
(MGI:4453945|PMID:20110424)
UniProt
RGD
PMID:20110424 GO_REF:0000024 MGI:4453945 NCBI chr 5:155,601,691...155,635,656
Ensembl chr 5:155,601,691...155,635,656
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:18815287) RGD PMID:18815287 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
JBrowse link
Notch signaling pathway involved in arterial endothelial cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3847069|PMID:19144989)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:19144989 GO_REF:0000024 GO_REF:0000107 MGI:3847069 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
JBrowse link
pancreatic A cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neurod1 neuronal differentiation 1 acts_upstream_of_or_within ISO MGI:97347 (PMID:17988662) RGD PMID:17988662 NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649
JBrowse link
G Nkx2-2 NK2 homeobox 2 acts_upstream_of_or_within ISO MGI:1339708|MGI:1932100 (PMID:17202186), (PMID:17988662) RGD PMID:17202186 PMID:17988662 NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
JBrowse link
pancreatic PP cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neurod1 neuronal differentiation 1 acts_upstream_of_or_within ISO MGI:97347 (PMID:17988662) RGD PMID:17988662 NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649
JBrowse link
G Nkx2-2 NK2 homeobox 2 acts_upstream_of_or_within ISO MGI:1339708 (PMID:17988662) RGD PMID:17988662 NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
JBrowse link
Sertoli cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rara retinoic acid receptor, alpha involved_in ISO (MGI:5284770|PMID:17905941) RGD PMID:17905941 MGI:5284770 NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
JBrowse link
type B pancreatic cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx2-2 NK2 homeobox 2 acts_upstream_of_or_within ISO MGI:1932100 (PMID:17202186), (PMID:17988662) RGD PMID:17202186 PMID:17988662 NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20413
    cellular process 18812
      cellular developmental process 4768
        cell fate commitment 294
          epithelial cell fate commitment 18
            Sertoli cell fate commitment 1
            endothelial cell fate commitment + 8
            glomerular parietal epithelial cell fate commitment + 0
            granulosa cell fate commitment 0
            leading edge cell fate commitment + 0
            pancreatic A cell fate commitment 2
            pancreatic D cell fate commitment 0
            pancreatic PP cell fate commitment 2
            podocyte cell fate commitment + 0
            type B pancreatic cell fate commitment 1
Path 2
Term Annotations click to browse term
  biological_process 20413
    developmental process 7068
      anatomical structure development 6575
        tissue development 2306
          epithelium development 1442
            epithelial cell differentiation 855
              epithelial cell fate commitment 18
                Sertoli cell fate commitment 1
                endothelial cell fate commitment + 8
                glomerular parietal epithelial cell fate commitment + 0
                granulosa cell fate commitment 0
                leading edge cell fate commitment + 0
                pancreatic A cell fate commitment 2
                pancreatic D cell fate commitment 0
                pancreatic PP cell fate commitment 2
                podocyte cell fate commitment + 0
                type B pancreatic cell fate commitment 1
paths to the root