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ONTOLOGY REPORT - ANNOTATIONS

Term:podocyte differentiation
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Accession:GO:0072112 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires specialized features of a glomerular visceral epithelial cell. A glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells.
Synonyms:exact_synonym: glomerular visceral epithelial cell differentiation


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podocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Basp1 brain abundant, membrane attached signal protein 1 involved_in ISO (PMID:19050011) RGD PMID:19050011 NCBI chr 2:75,816,130...75,863,801
Ensembl chr 2:75,816,122...75,864,043 		JBrowse link
G Cd24 CD24 molecule involved_in ISO
ISS 		(PMID:19092120)
GO_REF:0000024 		RGD
UniProt		 PMID:19092120 GO_REF:0000024 NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662 		JBrowse link
G Cd2ap CD2-associated protein acts_upstream_of_or_within ISO MGI:2664945 (PMID:25968128) RGD PMID:25968128 NCBI chr 9:18,086,744...18,182,744
Ensembl chr 9:18,086,984...18,182,199 		JBrowse link
G Edn1 endothelin 1 involved_in
acts_upstream_of_or_within 		ISO
IEA 		(PMID:31402170)
GO_REF:0000107
MGI:102720|MGI:105923 (PMID:24722437) 		RGD
Ensembl		 PMID:24722437 PMID:31402170 GO_REF:0000107 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885 		JBrowse link
G Ednra endothelin receptor type A involved_in IEA
ISO 		GO_REF:0000107
MGI:102720|MGI:105923 (PMID:24722437), (PMID:31402170) 		Ensembl
RGD		 PMID:24722437 PMID:31402170 GO_REF:0000107 NCBI chr19:47,137,360...47,207,961
Ensembl chr19:30,233,571...30,297,049 		JBrowse link
G Ednrb endothelin receptor type B involved_in ISO
IEA 		MGI:102720|MGI:105923 (PMID:24722437)
GO_REF:0000107 		RGD
Ensembl		 PMID:24722437 GO_REF:0000107 NCBI chr15:87,055,490...87,086,765
Ensembl chr15:80,643,043...80,672,115 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within_positive_effect ISO
IEA 		(PMID:18480751)
GO_REF:0000107 		RGD
Ensembl		 PMID:18480751 GO_REF:0000107 NCBI chr 7:86,265,651...86,544,488
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1857740 (PMID:16498405) RGD PMID:16498405 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737 		JBrowse link
G Klf15 KLF transcription factor 15 involved_in ISO
IEA 		(PMID:22493483)
GO_REF:0000107 		RGD
Ensembl		 PMID:22493483 GO_REF:0000107 NCBI chr 4:122,965,718...122,978,403
Ensembl chr 4:122,965,807...122,978,374 		JBrowse link
G Prom1 prominin 1 involved_in ISO
IEA 		(PMID:19092120)
GO_REF:0000107 		RGD
Ensembl		 PMID:19092120 GO_REF:0000107 NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527 		JBrowse link
G Ptpro protein tyrosine phosphatase, receptor type, O involved_in ISS
IEA
ISO
IBA 		GO_REF:0000024
GO_REF:0000107
(PMID:11086029)
GO_REF:0000033 		UniProt
Ensembl
RGD
GO_Central		 PMID:11086029 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:170,164,071...170,374,790
Ensembl chr 4:170,164,431...170,374,771 		JBrowse link
G Wt1 WT1 transcription factor involved_in ISS
ISO 		GO_REF:0000024
(PMID:19050011) 		UniProt
RGD		 PMID:19050011 GO_REF:0000024 NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:91,567,001...91,613,643 		JBrowse link
metanephric podocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb2 laminin subunit beta 2 acts_upstream_of_or_within ISO
IEA 		MGI:2138070 (PMID:16886065)
GO_REF:0000107 		RGD
Ensembl		 PMID:16886065 GO_REF:0000107 NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549 		JBrowse link
G Nphs2 NPHS2 stomatin family member, podocin involved_in ISO
IEA 		(PMID:11786407)
GO_REF:0000107 		RGD
Ensembl		 PMID:11786407 GO_REF:0000107 NCBI chr13:68,448,720...68,461,312
Ensembl chr13:68,448,926...68,461,313 		JBrowse link
podocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd2 adenosine monophosphate deaminase 2 acts_upstream_of_or_within ISO MGI:3848348 (PMID:25361754) RGD PMID:25361754 NCBI chr 2:195,707,609...195,720,454
Ensembl chr 2:195,707,610...195,720,271 		JBrowse link
G Asxl1 ASXL transcriptional regulator 1 involved_in ISO
IEA 		(PMID:26385183)
GO_REF:0000107 		RGD
Ensembl		 PMID:26385183 GO_REF:0000107 NCBI chr 3:141,814,012...141,881,526
Ensembl chr 3:141,813,433...141,881,538 		JBrowse link
G Jag1 jagged canonical Notch ligand 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:23806616)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:23806616 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:124,406,783...124,442,220
Ensembl chr 3:124,406,794...124,442,209 		JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in IEP PMID:15994232 UniProt PMID:15994232 RGD:8553727 NCBI chr 4:14,386,389...15,870,036
Ensembl chr 4:14,386,399...15,870,240 		JBrowse link
G Myo1e myosin IE involved_in ISS
ISO 		GO_REF:0000024
(PMID:19005011) 		UniProt
RGD		 PMID:19005011 GO_REF:0000024 NCBI chr 8:70,887,934...71,080,180
Ensembl chr 8:70,887,870...71,080,169 		JBrowse link
G Notch2 notch receptor 2 involved_in IEA
ISO 		GO_REF:0000107
(PMID:15821257) 		Ensembl
RGD		 PMID:15821257 GO_REF:0000107 NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088 		JBrowse link
G Podxl podocalyxin-like involved_in IEP PMID:15994232 UniProt PMID:15994232 RGD:8553727 NCBI chr 4:60,135,124...60,181,829
Ensembl chr 4:60,135,109...60,181,899 		JBrowse link
G Wt1 WT1 transcription factor involved_in ISO (PMID:18618131) RGD PMID:18618131 NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:91,567,001...91,613,643 		JBrowse link
positive regulation of metanephric podocyte development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing involved_in ISS
ISO 		GO_REF:0000024
(PMID:18431508) 		UniProt
RGD		 PMID:18431508 GO_REF:0000024 NCBI chr11:77,721,912...77,735,644
Ensembl chr11:77,721,912...77,735,564 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      cellular developmental process 4838
        cell differentiation 4837
          renal filtration cell differentiation 22
            podocyte differentiation 22
              mesonephric podocyte differentiation + 0
              metanephric podocyte differentiation + 3
              podocyte cell fate commitment + 0
              podocyte development + 11
Path 2
Term Annotations click to browse term
  biological_process 20543
    developmental process 7160
      anatomical structure development 6656
        multicellular organism development 5362
          system development 4644
            renal system development 423
              kidney development 409
                kidney epithelium development 178
                  nephron epithelium development 143
                    glomerular epithelium development 27
                      glomerular epithelial cell differentiation 23
                        podocyte differentiation 22
                          mesonephric podocyte differentiation + 0
                          metanephric podocyte differentiation + 3
                          podocyte cell fate commitment + 0
                          podocyte development + 11
paths to the root