ONTOLOGY REPORT - ANNOTATIONS
Term: stem cell proliferation
Accession: GO:0072089
browse the term
Definition: The multiplication or reproduction of stem cells, resulting in the expansion of a stem cell population. A stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells.
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Abcb1a
ATP binding cassette subfamily B member 1A
involved_in
ISO
(PMID:19384922)
RGD
PMID:19384922
NCBI chr 4:26,312,403...26,488,456
Ensembl chr 4:25,158,362...25,442,709
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Axin2
axin 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3579503 (PMID:20569694)
Ensembl RGD
PMID:20569694
GO_REF:0000107
NCBI chr10:94,393,379...94,426,579
Ensembl chr10:93,899,245...93,926,231
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Brca2
BRCA2, DNA repair associated
acts_upstream_of_or_within
ISO
MGI:1930616|MGI:2177226 (PMID:9398843), (PMID:9660919)
RGD
PMID:9398843 PMID:9660919
NCBI chr12:4,895,092...4,939,340
Ensembl chr12:59,819...100,567
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Bysl
bystin-like
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:17242206)
Ensembl RGD
PMID:17242206
GO_REF:0000107
NCBI chr 9:20,880,341...20,890,092
Ensembl chr 9:13,382,557...13,394,339
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Cd109
CD109 molecule
acts_upstream_of
ISO
MGI:5443927 (PMID:22846721)
RGD
PMID:22846721
NCBI chr 8:88,334,736...88,449,463
Ensembl chr 8:79,454,480...79,569,194
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Cd34
CD34 molecule
involved_in
ISO
(PMID:17261663)
RGD
PMID:17261663
NCBI chr13:109,008,786...109,029,317
Ensembl chr13:106,480,043...106,499,832
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Cdkn2c
cyclin-dependent kinase inhibitor 2C
acts_upstream_of
ISO
MGI:1316736 (PMID:17409423)
RGD
PMID:17409423
NCBI chr 5:129,639,736...129,645,564
Ensembl chr 5:124,411,124...124,416,278
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Ctnnb1
catenin beta 1
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 MGI:2148567 (PMID:18533146)
Ensembl RGD
PMID:18533146
GO_REF:0000107
NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111
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Dsg2
desmoglein 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:12494996)
Ensembl RGD
PMID:12494996
GO_REF:0000107
NCBI chr18:12,121,287...12,179,590
Ensembl chr18:11,846,183...11,904,156
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Ell3
elongation factor for RNA polymerase II 3
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 3:128,866,755...128,870,896
Ensembl chr 3:108,410,448...108,417,132
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Fgf10
fibroblast growth factor 10
acts_upstream_of
ISO
MGI:1859647 (PMID:10984614), (PMID:15199404), (PMID:16141225)
RGD
PMID:10984614 PMID:15199404 PMID:16141225
NCBI chr 2:52,533,939...52,610,980
Ensembl chr 2:50,800,992...50,876,866
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Fgf2
fibroblast growth factor 2
acts_upstream_of
ISO
MGI:95729 (PMID:16141225), (PMID:20570969)
RGD
PMID:16141225 PMID:20570969
NCBI chr 2:122,164,454...122,218,796
Ensembl chr 2:120,236,328...120,291,221
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Fgf4
fibroblast growth factor 4
acts_upstream_of
ISO
MGI:99604 (PMID:16245339)
RGD
PMID:16245339
NCBI chr 1:200,023,937...200,027,793
Ensembl chr 1:200,024,056...200,025,466
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Fgf8
fibroblast growth factor 8
acts_upstream_of
ISO
MGI:95518 (PMID:16245339)
RGD
PMID:16245339
NCBI chr 1:254,533,504...254,539,605
Ensembl chr 1:244,584,652...244,590,359
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Fgf9
fibroblast growth factor 9
acts_upstream_of
ISO
MGI:2135961 (PMID:16308329), (PMID:16540513), (PMID:18533146)
RGD
PMID:16308329 PMID:16540513 PMID:18533146
NCBI chr15:36,325,552...36,369,995
Ensembl chr15:32,210,074...32,253,309
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Fgfr1
Fibroblast growth factor receptor 1
acts_upstream_of
ISO
MGI:95523 (PMID:16540513), (PMID:18191119)
RGD
PMID:16540513 PMID:18191119
NCBI chr16:73,194,631...73,249,855
Ensembl chr16:66,494,042...66,547,350
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Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of
ISO
MGI:2153811|MGI:2153818|MGI:95522 (PMID:14530295), (PMID:15199404), (PMID:16540513)
RGD
PMID:14530295 PMID:15199404 PMID:16540513
NCBI chr 1:194,175,703...194,280,914
Ensembl chr 1:184,745,420...184,850,626
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Foxm1
forkhead box M1
acts_upstream_of
ISO
MGI:3522201 (PMID:15817462)
RGD
PMID:15817462
NCBI chr 4:161,639,538...161,652,012
Ensembl chr 4:161,638,816...161,650,684
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Gli2
GLI family zinc finger 2
acts_upstream_of
ISO
MGI:1857509 (PMID:9731531)
RGD
PMID:9731531
NCBI chr13:32,499,678...32,716,418
Ensembl chr13:29,946,809...30,163,574
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Gli3
GLI family zinc finger 3
acts_upstream_of
ISO
MGI:1856276|MGI:95516 (PMID:20570969)
RGD
PMID:20570969
NCBI chr17:54,134,064...54,405,198
Ensembl chr17:49,438,567...49,709,712
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Hmga2
high mobility group AT-hook 2
acts_upstream_of
ISO
MGI:2386412 (PMID:18957199)
RGD
PMID:18957199
NCBI chr 7:57,762,710...57,884,555
Ensembl chr 7:55,880,112...55,994,784
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Hmx2
H6 family homeobox 2
acts_upstream_of
ISO
MGI:2154542 (PMID:11748138)
RGD
PMID:11748138
NCBI chr 1:195,749,284...195,758,347
Ensembl chr 1:186,319,110...186,326,771
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Hoxa3
homeobox A3
acts_upstream_of
ISO
MGI:1857992 (PMID:15714286)
RGD
PMID:15714286
NCBI chr 4:82,599,860...82,643,831
Ensembl chr 4:81,269,243...81,313,218
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Ift80
intraflagellar transport 80
acts_upstream_of_or_within
ISO
(PMID:30683845)
RGD
PMID:30683845
NCBI chr 2:155,455,773...155,550,082
Ensembl chr 2:153,145,795...153,240,024
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Irf6
interferon regulatory factor 6
acts_upstream_of_or_within
ISO
MGI:1891831 (PMID:17041603)
RGD
PMID:17041603
NCBI chr13:107,200,876...107,220,083
Ensembl chr13:104,672,179...104,691,386
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Kdf1
keratinocyte differentiation factor 1
acts_upstream_of
ISO
MGI:1330810|MGI:1891831|MGI:5559501 (PMID:24075906)
RGD
PMID:24075906
NCBI chr 5:145,744,753...145,758,150
Ensembl chr 5:145,745,099...145,755,878
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Kdr
kinase insert domain receptor
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 (PMID:16375885)
Ensembl RGD
PMID:16375885
GO_REF:0000107
NCBI chr14:32,572,031...32,615,204
Ensembl chr14:32,217,871...32,261,018
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L3mbtl2
L3MBTL histone methyl-lysine binding protein 2
acts_upstream_of_or_within
ISO
MGI:5810650 (PMID:22770845)
RGD
PMID:22770845
NCBI chr 7:115,066,427...115,087,625
Ensembl chr 7:113,186,370...113,207,489
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Lig4
DNA ligase 4
acts_upstream_of_or_within
ISO
MGI:3714783 (PMID:17554302)
RGD
PMID:17554302
NCBI chr16:86,220,345...86,228,930
Ensembl chr16:79,518,312...79,527,040
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Lrp6
LDL receptor related protein 6
acts_upstream_of
ISO
MGI:4415718 (PMID:19700620)
RGD
PMID:19700620
NCBI chr 4:168,997,937...169,131,716
Ensembl chr 4:167,270,353...167,400,497
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Men1
menin 1
acts_upstream_of
ISO
MGI:105388|MGI:2683274|MGI:3573783 (PMID:17409423), (PMID:17927973)
RGD
PMID:17409423 PMID:17927973
NCBI chr 1:213,068,166...213,074,132
Ensembl chr 1:203,639,000...203,644,871
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Mir205
microRNA 205
acts_upstream_of
ISO
(PMID:23974039)
RGD
PMID:23974039
NCBI chr13:107,564,535...107,564,642
Ensembl chr13:105,035,878...105,035,985
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Mki67
marker of proliferation Ki-67
acts_upstream_of_or_within
ISO
(PMID:19303854)
RGD
PMID:19303854
NCBI chr 1:199,926,150...199,952,847
Ensembl chr 1:190,496,319...190,522,762
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Nes
nestin
involved_in
ISO
(PMID:19384922)
RGD
PMID:19384922
NCBI chr 2:175,735,715...175,745,631
Ensembl chr 2:173,438,734...173,447,777
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Nf1
neurofibromin 1
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 MGI:98834 (PMID:10591653)
Ensembl RGD
PMID:10591653
GO_REF:0000107
NCBI chr10:64,803,986...65,037,086
Ensembl chr10:64,306,301...64,536,658
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Nfatc1
nuclear factor of activated T-cells 1
acts_upstream_of
ISO
MGI:2181762 (PMID:18243104)
RGD
PMID:18243104
NCBI chr18:76,321,386...76,430,997
Ensembl chr18:74,046,904...74,156,028
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Nfib
nuclear factor I/B
acts_upstream_of
ISO
MGI:3530139 (PMID:15632069)
RGD
PMID:15632069
NCBI chr 5:101,805,168...102,020,618
Ensembl chr 5:96,764,653...96,975,479
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Osr2
odd-skipped related transcription factor 2
acts_upstream_of
ISO
MGI:3033240 (PMID:15175245)
RGD
PMID:15175245
NCBI chr 7:66,487,841...66,495,003
Ensembl chr 7:66,487,839...66,495,224
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Ovol1
ovo like transcriptional repressor 1
acts_upstream_of
ISO
MGI:1338039 (PMID:24735878)
RGD
PMID:24735878
NCBI chr 1:212,284,601...212,296,106
Ensembl chr 1:202,855,265...202,866,831
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Pax3
paired box 3
acts_upstream_of
ISO
MGI:1856293 (PMID:10946068)
RGD
PMID:10946068
NCBI chr 9:87,015,960...87,112,531
Ensembl chr 9:79,568,634...79,664,042
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Pbx1
PBX homeobox 1
acts_upstream_of
ISO
MGI:2155612 (PMID:15944191), (PMID:22560297)
RGD
PMID:15944191 PMID:22560297
NCBI chr13:82,811,664...83,121,447
Ensembl chr13:80,278,770...80,588,594
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Prrx1
paired related homeobox 1
acts_upstream_of
ISO
MGI:98218 (PMID:11532916)
RGD
PMID:11532916
NCBI chr13:78,136,783...78,205,379
Ensembl chr13:75,601,706...75,670,866
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Prrx2
paired related homeobox 2
acts_upstream_of
ISO
MGI:97712 (PMID:11532916)
RGD
PMID:11532916
NCBI chr 3:14,132,574...14,168,533
Ensembl chr 3:14,094,004...14,168,535
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Ptch1
patched 1
acts_upstream_of acts_upstream_of_or_within
ISO
MGI:1856954 (PMID:17631878)
RGD
PMID:17631878
NCBI chr17:1,548,449...1,613,461
Ensembl chr17:1,542,877...1,607,333
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Rarb
retinoic acid receptor, beta
acts_upstream_of
ISO
MGI:97858 (PMID:10075839)
RGD
PMID:10075839
NCBI chr15:10,837,252...11,482,037
Ensembl chr15:8,406,492...9,051,288
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Rarg
retinoic acid receptor, gamma
acts_upstream_of
ISO
MGI:97857 (PMID:10075839)
RGD
PMID:10075839
NCBI chr 7:135,246,427...135,268,889
Ensembl chr 7:133,367,833...133,390,177
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Rbpj
recombination signal binding protein for immunoglobulin kappa J region
acts_upstream_of
ISO
MGI:1926500|MGI:3583755 (PMID:17079689)
RGD
PMID:17079689
NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353
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Rnf43
ring finger protein 43
involved_in
ISO
(PMID:22895187)
RGD
PMID:22895187
NCBI chr10:72,461,508...72,537,301
Ensembl chr10:72,464,348...72,536,977
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Runx2
RUNX family transcription factor 2
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 MGI:2176465 (PMID:15668330)
Ensembl RGD
PMID:15668330
GO_REF:0000107
NCBI chr 9:23,661,278...23,990,248
Ensembl chr 9:16,167,482...16,492,167
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Setd1a
SET domain containing 1A, histone lysine methyltransferase
acts_upstream_of
ISO
MGI:5568941 (PMID:24550110)
RGD
PMID:24550110
NCBI chr 1:191,818,752...191,842,167
Ensembl chr 1:182,388,060...182,411,090
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Sfn
stratifin
acts_upstream_of
ISO
MGI:1859211|MGI:1916323 (PMID:17041603), (PMID:24075906)
RGD
PMID:17041603 PMID:24075906
NCBI chr 5:151,110,582...151,111,854
Ensembl chr 5:145,826,201...145,831,314
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Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:15337776)
Ensembl RGD
PMID:15337776
GO_REF:0000107
NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170
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Shox2
SHOX homeobox 2
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 MGI:3626291 (PMID:18514492)
Ensembl RGD
PMID:18514492
GO_REF:0000107
NCBI chr 2:153,524,324...153,537,571
Ensembl chr 2:151,217,552...151,227,143
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Sox9
SRY-box transcription factor 9
acts_upstream_of
ISO
MGI:2385468|MGI:2450311|MGI:3841145 (PMID:17350610), (PMID:20346939)
RGD
PMID:17350610 PMID:20346939
NCBI chr10:98,305,744...98,311,250
Ensembl chr10:97,806,485...97,811,994
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Tbx18
T-box transcription factor 18
acts_upstream_of
ISO
MGI:3044914 (PMID:16511601)
RGD
PMID:16511601
NCBI chr 8:97,531,960...97,559,988
Ensembl chr 8:88,652,054...88,680,058
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Tbx3
T-box transcription factor 3
acts_upstream_of
ISO
MGI:3769504 (PMID:18356246)
RGD
PMID:18356246
NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708
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Tgfb1
transforming growth factor, beta 1
acts_upstream_of
ISO
(PMID:15604101)
RGD
PMID:15604101
NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847
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Tial1
Tia1 cytotoxic granule-associated RNA binding protein-like 1
acts_upstream_of
ISO
MGI:2660803 (PMID:9482885)
RGD
PMID:9482885
NCBI chr 1:192,438,794...192,475,520
Ensembl chr 1:183,009,253...183,031,637
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Tlx1
T-cell leukemia, homeobox 1
acts_upstream_of
ISO
MGI:1857260 (PMID:15944191)
RGD
PMID:15944191
NCBI chr 1:253,954,197...253,960,458
Ensembl chr 1:244,005,057...244,011,318
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Tp53
tumor protein p53
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 MGI:97306 (PMID:10591653)
Ensembl RGD
PMID:10591653
GO_REF:0000107
NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524
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Tp63
tumor protein p63
acts_upstream_of acts_upstream_of_or_within
ISO
MGI:1916323 (PMID:24075906) MGI:5882553 (PMID:25503409)
RGD
PMID:24075906 PMID:25503409
NCBI chr11:88,343,647...88,554,543
Ensembl chr11:74,838,859...75,049,398
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Trim71
tripartite motif containing 71
involved_in
ISS ISO
GO_REF:0000024 (PMID:22735451)
UniProt RGD
PMID:22735451
GO_REF:0000024
NCBI chr 8:114,193,439...114,250,807
Ensembl chr 8:114,199,187...114,250,807
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Ttyh1
tweety family member 1
acts_upstream_of_or_within
ISO
(PMID:31079925)
RGD
PMID:31079925
NCBI chr 1:79,125,564...79,144,137
Ensembl chr 1:70,053,324...70,071,845
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Wnt11
Wnt family member 11
acts_upstream_of
ISO
(PMID:18191119)
RGD
PMID:18191119
NCBI chr 1:162,545,660...162,565,456
Ensembl chr 1:153,138,197...153,154,294
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Wnt3
Wnt family member 3
involved_in
ISO
(PMID:25640183)
RGD
PMID:25640183
NCBI chr10:89,180,224...89,224,195
Ensembl chr10:88,680,248...88,724,099
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Wnt5a
Wnt family member 5A
acts_upstream_of
ISO
MGI:1857617 (PMID:19100728)
RGD
PMID:19100728
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
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Wnt7b
Wnt family member 7B
involved_in
ISO
(PMID:19734317)
RGD
PMID:19734317
NCBI chr 7:118,514,684...118,559,316
Ensembl chr 7:116,634,814...116,679,581
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Znrf3
zinc and ring finger 3
involved_in
ISO
(PMID:22895187)
RGD
PMID:22895187
NCBI chr14:84,375,668...84,527,465
Ensembl chr14:80,160,278...80,313,485
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Ang
angiogenin
involved_in
ISO
(PMID:27518564)
RGD
PMID:27518564
NCBI chr15:26,786,233...26,796,883
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Arih2
ariadne RBR E3 ubiquitin protein ligase 2
involved_in
ISO
(PMID:16118314), (PMID:19340006)
RGD
PMID:16118314 PMID:19340006
NCBI chr 8:118,175,267...118,234,425
Ensembl chr 8:109,296,738...109,355,852
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Babam1
BRISC and BRCA1 A complex member 1
acts_upstream_of_or_within
ISO
MGI:3994220 (PMID:25636339)
RGD
PMID:25636339
NCBI chr16:18,068,830...18,074,938
Ensembl chr16:18,068,884...18,074,923
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Brca2
BRCA2, DNA repair associated
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2448890 (PMID:16859999)
Ensembl RGD
PMID:16859999
GO_REF:0000107
NCBI chr12:4,895,092...4,939,340
Ensembl chr12:59,819...100,567
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Cd34
CD34 molecule
involved_in
ISS ISO
GO_REF:0000024 (PMID:21873977)
UniProt RGD
PMID:21873977
GO_REF:0000024
NCBI chr13:109,008,786...109,029,317
Ensembl chr13:106,480,043...106,499,832
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Cebpa
CCAAT/enhancer binding protein alpha
acts_upstream_of
ISO
MGI:2177135 (PMID:15073037)
RGD
PMID:15073037
NCBI chr 1:96,896,584...96,899,256
Ensembl chr 1:87,759,433...87,762,412
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Ctc1
CST telomere replication complex component 1
acts_upstream_of_or_within
ISO
MGI:5427642 (PMID:22531781)
RGD
PMID:22531781
NCBI chr10:54,212,537...54,234,146
Ensembl chr10:53,714,644...53,735,298
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Dab2
DAB adaptor protein 2
acts_upstream_of_or_within
ISO
(PMID:29925839)
RGD
PMID:29925839
NCBI chr 2:57,241,947...57,294,893
Ensembl chr 2:55,514,700...55,567,476
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Ercc2
ERCC excision repair 2, TFIIH core complex helicase subunit
acts_upstream_of_or_within
ISO
MGI:2183947 (PMID:17554309)
RGD
PMID:17554309
NCBI chr 1:88,161,342...88,175,102
Ensembl chr 1:79,033,326...79,047,102
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Etv6
ETS variant transcription factor 6
involved_in
ISO
(PMID:25581430)
RGD
PMID:25581430
NCBI chr 4:168,580,405...168,819,817
Ensembl chr 4:166,847,686...167,084,992
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Fubp1
far upstream element binding protein 1
acts_upstream_of_or_within
ISO
MGI:4335984|MGI:4351702 (PMID:26095368)
RGD
PMID:26095368
NCBI chr 2:243,819,529...243,846,544
Ensembl chr 2:241,159,512...241,186,602
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Gba1
glucosylceramidase beta 1
acts_upstream_of_or_within_positive_effect
ISO
(PMID:22665763)
RGD
PMID:22665763
NCBI chr 2:176,902,141...176,916,015
Ensembl chr 2:174,609,403...174,618,263
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Hoxb4
homeo box B4
acts_upstream_of_or_within
ISO
MGI:3045971 (PMID:14962901)
RGD
PMID:14962901
NCBI chr10:81,284,552...81,287,134
Ensembl chr10:81,284,552...81,287,128
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Mecom
MDS1 and EVI1 complex locus
involved_in
ISO
(PMID:15889140)
RGD
PMID:15889140
NCBI chr 2:114,837,815...115,393,052
Ensembl chr 2:112,909,321...113,464,590
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Mir143
microRNA 143
acts_upstream_of_or_within_positive_effect
ISO
MGI:2676830|MGI:5531026 (PMID:29925839)
RGD
PMID:29925839
NCBI chr18:57,371,349...57,371,453
Ensembl chr18:55,101,006...55,101,110
G
Mir145
microRNA 145
acts_upstream_of_or_within_positive_effect
ISO
MGI:2676828|MGI:5531026 (PMID:29925839)
RGD
PMID:29925839
NCBI chr18:57,369,983...57,370,070
Ensembl chr18:55,099,640...55,099,727
G
Nkap
NFKB activating protein
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2176073|MGI:4839023 (PMID:20610818)
Ensembl RGD
PMID:20610818
GO_REF:0000107
NCBI chr X:116,373,031...116,392,677
Ensembl chr X:116,372,839...116,394,945
G
Prg4
proteoglycan 4
acts_upstream_of_or_within
ISO
MGI:3513195 (PMID:21939632)
RGD
PMID:21939632
NCBI chr13:65,037,363...65,054,764
Ensembl chr13:62,487,257...62,504,119
G
Sart3
spliceosome associated factor 3, U4/U6 recycling protein
acts_upstream_of_or_within
ISO
MGI:5052106 (PMID:21447833)
RGD
PMID:21447833
NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038
G
Sfrp2
secreted frizzled-related protein 2
involved_in
ISO
(PMID:19778523)
RGD
PMID:19778523
NCBI chr 2:171,387,536...171,395,081
Ensembl chr 2:169,089,517...169,097,063
G
Shb
SH2 domain containing adaptor protein B
acts_upstream_of_or_within
ISO
MGI:3721903 (PMID:23528453)
RGD
PMID:23528453
NCBI chr 5:64,473,694...64,581,072
Ensembl chr 5:59,678,216...59,785,538
G
Snai2
snail family transcriptional repressor 2
acts_upstream_of
ISO
MGI:2447174 (PMID:20032500)
RGD
PMID:20032500
NCBI chr11:99,686,934...99,690,349
Ensembl chr11:86,181,909...86,186,200
G
Terc
telomerase RNA component
acts_upstream_of_or_within
ISO
MGI:1857930 (PMID:17554309)
RGD
PMID:17554309
NCBI chr 2:112,815,654...112,816,041
G
Wnt1
Wnt family member 1
acts_upstream_of acts_upstream_of_or_within
ISO
(PMID:9160667)
RGD
PMID:9160667
NCBI chr 7:131,817,558...131,821,605
Ensembl chr 7:129,938,604...129,942,651
G
Wnt10b
Wnt family member 10B
involved_in acts_upstream_of_or_within
ISO
(PMID:9787155) (PMID:9160667)
RGD
PMID:9160667 PMID:9787155
NCBI chr 7:131,801,046...131,806,850
Ensembl chr 7:129,922,088...129,927,892
G
Wnt2b
Wnt family member 2B
involved_in
ISO
(PMID:9787155)
RGD
PMID:9787155
NCBI chr 2:195,142,573...195,156,945
Ensembl chr 2:192,453,824...192,470,308
G
Wnt5a
Wnt family member 5A
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:9787155) (PMID:9160667) GO_REF:0000107
RGD Ensembl
PMID:9160667 PMID:9787155
GO_REF:0000107
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
G
Xrcc5
X-ray repair cross complementing 5
acts_upstream_of_or_within
ISO
MGI:2152542 (PMID:17554309)
RGD
PMID:17554309
NCBI chr 9:81,404,507...81,493,293
Ensembl chr 9:73,955,216...74,044,018
G
Ythdf2
YTH N6-methyladenosine RNA binding protein F2
involved_in
ISO
(PMID:30065315), (PMID:30150673)
RGD
PMID:30065315 PMID:30150673
NCBI chr 5:149,665,467...149,693,127
Ensembl chr 5:144,381,431...144,408,144
G
Ndufs6
NADH:ubiquinone oxidoreductase subunit S6
acts_upstream_of_or_within
ISO
(PMID:33323934)
RGD
PMID:33323934
NCBI chr 1:29,968,833...29,977,423
Ensembl chr 1:29,968,842...29,977,467
G
Scrg1
stimulator of chondrogenesis 1
involved_in
ISO
(PMID:16188469)
RGD
PMID:16188469
NCBI chr16:32,760,028...32,788,299
Ensembl chr16:32,760,028...32,788,299
G
Six2
SIX homeobox 2
involved_in
ISO
(PMID:21350016)
RGD
PMID:21350016
NCBI chr 6:14,727,756...14,734,219
Ensembl chr 6:8,967,157...8,981,193
G
Cebpa
CCAAT/enhancer binding protein alpha
acts_upstream_of_or_within
ISO
MGI:2177135 (PMID:15073037)
RGD
PMID:15073037
NCBI chr 1:96,896,584...96,899,256
Ensembl chr 1:87,759,433...87,762,412
G
Irgm
immunity-related GTPase M
involved_in
ISS ISO
GO_REF:0000024 (PMID:21633090)
UniProt RGD
PMID:21633090
GO_REF:0000024
NCBI chr10:33,734,640...33,742,720
Ensembl chr10:33,233,455...33,241,578
G
Mir221
microRNA 221
involved_in
ISO
(PMID:16330772)
RGD
PMID:16330772
NCBI chr X:6,023,182...6,023,290
Ensembl chr X:3,429,465...3,429,573
G
Mir222
microRNA 222
involved_in
ISO
(PMID:16330772)
RGD
PMID:16330772
NCBI chr X:6,022,621...6,022,723
Ensembl chr X:3,428,904...3,429,006
G
Snai2
snail family transcriptional repressor 2
acts_upstream_of_or_within
ISO
MGI:2447174 (PMID:20032500)
RGD
PMID:20032500
NCBI chr11:99,686,934...99,690,349
Ensembl chr11:86,181,909...86,186,200
G
Tsc22d1
TSC22 domain family, member 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:19329776)
UniProt RGD
PMID:19329776
GO_REF:0000024
NCBI chr15:58,159,612...58,260,244
Ensembl chr15:51,749,510...51,850,958
G
Mir16-2
microRNA 16-2
involved_in
ISO
(PMID:23083510)
RGD
PMID:23083510
NCBI chr 2:155,555,327...155,555,421
Ensembl chr 2:153,245,349...153,245,443
G
Mir181a2
microRNA 181a-2
acts_upstream_of
ISO
(PMID:22714950)
RGD
PMID:22714950
NCBI chr 3:43,025,563...43,025,679
Ensembl chr 3:22,615,845...22,615,961
G
Mir29b1
microRNA 29b-1
involved_in
ISO
(PMID:27030318)
RGD
PMID:27030318
NCBI chr 4:60,618,334...60,618,414
Ensembl chr 4:59,650,986...59,651,067
G
Mir29b2
microRNA 29b-2
involved_in
ISO
(PMID:27030318)
RGD
PMID:27030318
NCBI chr13:109,098,831...109,098,911
Ensembl chr13:106,570,367...106,570,456
G
Cd109
CD109 molecule
acts_upstream_of_or_within
ISO
MGI:5443927 (PMID:22846721)
RGD
PMID:22846721
NCBI chr 8:88,334,736...88,449,463
Ensembl chr 8:79,454,480...79,569,194
G
Cdkn2c
cyclin-dependent kinase inhibitor 2C
acts_upstream_of_or_within
ISO
MGI:1316736 (PMID:17409423)
RGD
PMID:17409423
NCBI chr 5:129,639,736...129,645,564
Ensembl chr 5:124,411,124...124,416,278
G
Fbln1
fibulin 1
involved_in
ISO
(PMID:11238726)
RGD
PMID:11238726
NCBI chr 7:118,190,347...118,269,965
Ensembl chr 7:116,310,582...116,390,075
G
Fermt1
FERM domain containing kindlin 1
involved_in
ISO
(PMID:24681597)
RGD
PMID:24681597
NCBI chr 3:140,624,434...140,666,419
Ensembl chr 3:120,171,561...120,213,555
G
Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
(PMID:16141225)
RGD
PMID:16141225
NCBI chr 2:52,533,939...52,610,980
Ensembl chr 2:50,800,992...50,876,866
G
Fgf2
fibroblast growth factor 2
acts_upstream_of_or_within
ISO
MGI:95729 (PMID:20570969)
RGD
PMID:20570969
NCBI chr 2:122,164,454...122,218,796
Ensembl chr 2:120,236,328...120,291,221
G
Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:1856276|MGI:95516 (PMID:20570969)
RGD
PMID:20570969
NCBI chr17:54,134,064...54,405,198
Ensembl chr17:49,438,567...49,709,712
G
Irf6
interferon regulatory factor 6
acts_upstream_of_or_within
ISO
MGI:1891831 (PMID:17041603)
RGD
PMID:17041603
NCBI chr13:107,200,876...107,220,083
Ensembl chr13:104,672,179...104,691,386
G
Kdf1
keratinocyte differentiation factor 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (PMID:24075906) MGI:1330810|MGI:1891831|MGI:5559501 (PMID:24075906)
UniProt RGD
PMID:24075906
GO_REF:0000024
NCBI chr 5:145,744,753...145,758,150
Ensembl chr 5:145,745,099...145,755,878
G
Men1
menin 1
acts_upstream_of_or_within
ISO
MGI:105388|MGI:2683274|MGI:3573783 (PMID:17409423), (PMID:17927973)
RGD
PMID:17409423 PMID:17927973
NCBI chr 1:213,068,166...213,074,132
Ensembl chr 1:203,639,000...203,644,871
G
Nf1
neurofibromin 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:98834 (PMID:10591653)
Ensembl RGD
PMID:10591653
GO_REF:0000107
NCBI chr10:64,803,986...65,037,086
Ensembl chr10:64,306,301...64,536,658
G
Nfatc1
nuclear factor of activated T-cells 1
acts_upstream_of_or_within
ISO
MGI:2181762 (PMID:18243104)
RGD
PMID:18243104
NCBI chr18:76,321,386...76,430,997
Ensembl chr18:74,046,904...74,156,028
G
Nfib
nuclear factor I/B
acts_upstream_of_or_within
ISO
MGI:3530139 (PMID:15632069)
RGD
PMID:15632069
NCBI chr 5:101,805,168...102,020,618
Ensembl chr 5:96,764,653...96,975,479
G
Ovol1
ovo like transcriptional repressor 1
acts_upstream_of_or_within
ISO
MGI:1338039 (PMID:24735878)
RGD
PMID:24735878
NCBI chr 1:212,284,601...212,296,106
Ensembl chr 1:202,855,265...202,866,831
G
Ovol2
ovo-like zinc finger 2
acts_upstream_of_or_within
ISO
MGI:1330290 (PMID:24735878)
RGD
PMID:24735878
NCBI chr 3:152,130,767...152,160,487
Ensembl chr 3:131,677,391...131,708,359
G
Ptch1
patched 1
acts_upstream_of_or_within
ISO
MGI:1856954 (PMID:17631878)
RGD
PMID:17631878
NCBI chr17:1,548,449...1,613,461
Ensembl chr17:1,542,877...1,607,333
G
Rarb
retinoic acid receptor, beta
acts_upstream_of_or_within
ISO
MGI:97858 (PMID:10075839)
RGD
PMID:10075839
NCBI chr15:10,837,252...11,482,037
Ensembl chr15:8,406,492...9,051,288
G
Rarg
retinoic acid receptor, gamma
acts_upstream_of_or_within
ISO
MGI:97857 (PMID:10075839)
RGD
PMID:10075839
NCBI chr 7:135,246,427...135,268,889
Ensembl chr 7:133,367,833...133,390,177
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
acts_upstream_of_or_within
ISO
MGI:1926500|MGI:3583755 (PMID:17079689)
RGD
PMID:17079689
NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353
G
Septin4
septin 4
involved_in
ISO
(PMID:30389919)
RGD
PMID:30389919
NCBI chr10:72,863,969...72,888,018
Ensembl chr10:72,366,873...72,390,768
G
Sfn
stratifin
acts_upstream_of_or_within
ISO
MGI:1859211|MGI:1916323 (PMID:17041603), (PMID:24075906)
RGD
PMID:17041603 PMID:24075906
NCBI chr 5:151,110,582...151,111,854
Ensembl chr 5:145,826,201...145,831,314
G
Tp53
tumor protein p53
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:97306 (PMID:10591653)
Ensembl RGD
PMID:10591653
GO_REF:0000107
NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524
G
Wnt11
Wnt family member 11
acts_upstream_of_or_within
ISO
(PMID:18191119)
RGD
PMID:18191119
NCBI chr 1:162,545,660...162,565,456
Ensembl chr 1:153,138,197...153,154,294
G
Atxn1l
ataxin 1 like
acts_upstream_of_or_within
ISO
MGI:5301616 (PMID:23555280)
RGD
PMID:23555280
NCBI chr19:54,609,852...54,621,024
Ensembl chr19:37,700,106...37,711,538
G
Cxcl1
C-X-C motif chemokine ligand 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:10725737)
Ensembl RGD
PMID:10725737
GO_REF:0000107
NCBI chr14:17,477,542...17,479,321
Ensembl chr14:17,193,365...17,195,215
G
Kat7
lysine acetyltransferase 7
involved_in
ISS ISO
GO_REF:0000024 (PMID:31827282)
UniProt RGD
PMID:31827282
GO_REF:0000024
NCBI chr10:80,718,335...80,752,387
Ensembl chr10:80,221,524...80,255,567
G
Kitlg
KIT ligand
acts_upstream_of_or_within
ISO
(PMID:21540074)
RGD
PMID:21540074
NCBI chr 7:36,782,621...36,863,796
Ensembl chr 7:34,896,053...34,977,214
G
N4bp2l2
NEDD4 binding protein 2-like 2
involved_in
ISO
(PMID:19506020)
RGD
PMID:19506020
NCBI chr12:4,972,967...5,038,027
Ensembl chr12:103,590...197,784
G
Pdcd2
programmed cell death 2
involved_in
ISO
(PMID:22922207)
RGD
PMID:22922207
NCBI chr 1:56,484,947...56,490,437
Ensembl chr 1:56,463,931...56,490,437
G
Thpo
thrombopoietin
acts_upstream_of_or_within involved_in
ISO IBA IEA
(PMID:21540074) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:21540074
GO_REF:0000033 GO_REF:0000107
Ensembl chr11:80,182,820...80,188,167
G
Thpol1
thrombopoietin like 1
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
G
Wnt1
Wnt family member 1
acts_upstream_of_or_within
ISO
(PMID:9160667)
RGD
PMID:9160667
NCBI chr 7:131,817,558...131,821,605
Ensembl chr 7:129,938,604...129,942,651
G
Wnt10b
Wnt family member 10B
acts_upstream_of_or_within
ISO
(PMID:9160667)
RGD
PMID:9160667
NCBI chr 7:131,801,046...131,806,850
Ensembl chr 7:129,922,088...129,927,892
G
Wnt5a
Wnt family member 5A
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:9160667)
Ensembl RGD
PMID:9160667
GO_REF:0000107
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
G
Bmp4
bone morphogenetic protein 4
IMP
RGD
PMID:19723531
RGD:9068401
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
G
Ccne1
cyclin E1
involved_in
ISO IEA
(PMID:23083510) GO_REF:0000107
RGD Ensembl
PMID:23083510
GO_REF:0000107
NCBI chr 1:99,918,672...99,927,986
Ensembl chr 1:90,781,949...90,791,101
G
Fermt2
FERM domain containing kindlin 2
involved_in
ISO
(PMID:29496737)
RGD
PMID:29496737
NCBI chr15:21,162,603...21,257,995
Ensembl chr15:18,682,927...18,751,811
G
Ltbp3
latent transforming growth factor beta binding protein 3
involved_in
ISO
(PMID:18672106)
RGD
PMID:18672106
NCBI chr 1:212,458,362...212,475,302
Ensembl chr 1:203,029,877...203,045,975
G
Tgfb1
transforming growth factor, beta 1
involved_in
ISO
UniProtKB:P36897 (PMID:22714950)
RGD
PMID:22714950
NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
ISO IEA
UniProtKB:P01137 (PMID:22714950) GO_REF:0000107
RGD Ensembl
PMID:22714950
GO_REF:0000107
NCBI chr 5:66,449,348...66,506,371
Ensembl chr 5:61,653,233...61,710,777
G
Vegfc
vascular endothelial growth factor C
involved_in
ISO
(PMID:26934950)
RGD
PMID:26934950
NCBI chr16:44,445,293...44,560,887
Ensembl chr16:37,712,262...37,827,848
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2148567 (PMID:18533146)
Ensembl RGD
PMID:18533146
GO_REF:0000107
NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111
G
Dppa2
developmental pluripotency-associated 2
acts_upstream_of_or_within
ISO
(PMID:19846433)
RGD
PMID:19846433
NCBI chr11:66,008,002...66,020,044
Ensembl chr11:52,549,651...52,556,740
G
Ell3
elongation factor for RNA polymerase II 3
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 3:128,866,755...128,870,896
Ensembl chr 3:108,410,448...108,417,132
G
Epcam
epithelial cell adhesion molecule
involved_in
ISO IEA
(PMID:19785009) GO_REF:0000107
RGD Ensembl
PMID:19785009
GO_REF:0000107
NCBI chr 6:12,633,715...12,649,678
Ensembl chr 6:6,878,237...6,896,127
G
Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
MGI:1859647 (PMID:10984614), (PMID:15199404)
RGD
PMID:10984614 PMID:15199404
NCBI chr 2:52,533,939...52,610,980
Ensembl chr 2:50,800,992...50,876,866
G
Fgf2
fibroblast growth factor 2
acts_upstream_of_or_within
ISO
(PMID:16141225)
RGD
PMID:16141225
NCBI chr 2:122,164,454...122,218,796
Ensembl chr 2:120,236,328...120,291,221
G
Fgf4
fibroblast growth factor 4
acts_upstream_of_or_within
ISO
MGI:99604 (PMID:16245339)
RGD
PMID:16245339
NCBI chr 1:200,023,937...200,027,793
Ensembl chr 1:200,024,056...200,025,466
G
Fgf8
fibroblast growth factor 8
acts_upstream_of_or_within
ISO
MGI:95518 (PMID:16245339)
RGD
PMID:16245339
NCBI chr 1:254,533,504...254,539,605
Ensembl chr 1:244,584,652...244,590,359
G
Fgf9
fibroblast growth factor 9
acts_upstream_of_or_within
ISO
MGI:2135961 (PMID:16308329), (PMID:16540513), (PMID:18533146)
RGD
PMID:16308329 PMID:16540513 PMID:18533146
NCBI chr15:36,325,552...36,369,995
Ensembl chr15:32,210,074...32,253,309
G
Fgfr1
Fibroblast growth factor receptor 1
acts_upstream_of_or_within
ISO
MGI:95523 (PMID:16540513), (PMID:18191119)
RGD
PMID:16540513 PMID:18191119
NCBI chr16:73,194,631...73,249,855
Ensembl chr16:66,494,042...66,547,350
G
Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
MGI:2153811|MGI:2153818|MGI:95522 (PMID:14530295), (PMID:15199404), (PMID:16540513)
RGD
PMID:14530295 PMID:15199404 PMID:16540513
NCBI chr 1:194,175,703...194,280,914
Ensembl chr 1:184,745,420...184,850,626
G
Foxm1
forkhead box M1
acts_upstream_of_or_within
ISO
MGI:3522201 (PMID:15817462)
RGD
PMID:15817462
NCBI chr 4:161,639,538...161,652,012
Ensembl chr 4:161,638,816...161,650,684
G
Gja1
gap junction protein, alpha 1
involved_in
ISO
(PMID:30599359)
RGD
PMID:30599359
NCBI chr20:36,302,490...36,315,010
Ensembl chr20:35,755,991...35,768,582
G
Gli2
GLI family zinc finger 2
acts_upstream_of_or_within
ISO
MGI:1857509 (PMID:9731531)
RGD
PMID:9731531
NCBI chr13:32,499,678...32,716,418
Ensembl chr13:29,946,809...30,163,574
G
Hdac5
histone deacetylase 5
involved_in
ISO
(PMID:20123967)
RGD
PMID:20123967
NCBI chr10:87,653,139...87,688,078
Ensembl chr10:87,152,978...87,188,235
G
Hmga2
high mobility group AT-hook 2
involved_in acts_upstream_of_or_within
ISO ISS
(PMID:17624332), (PMID:21484705) GO_REF:0000024 MGI:2386412 (PMID:18957199)
RGD UniProt
PMID:17624332 PMID:18957199 PMID:21484705
GO_REF:0000024
NCBI chr 7:57,762,710...57,884,555
Ensembl chr 7:55,880,112...55,994,784
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Hmx2
H6 family homeobox 2
acts_upstream_of_or_within
ISO
MGI:2154542 (PMID:11748138)
RGD
PMID:11748138
NCBI chr 1:195,749,284...195,758,347
Ensembl chr 1:186,319,110...186,326,771
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Hnrnpu
heterogeneous nuclear ribonucleoprotein U
involved_in
ISO
(PMID:20833368)
RGD
PMID:20833368
NCBI chr13:92,609,791...92,618,580
Ensembl chr13:90,074,181...90,086,588
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Hoxa3
homeobox A3
acts_upstream_of_or_within
ISO
MGI:1857992 (PMID:15714286)
RGD
PMID:15714286
NCBI chr 4:82,599,860...82,643,831
Ensembl chr 4:81,269,243...81,313,218
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Kdm1a
lysine demethylase 1A
involved_in
ISO
(PMID:20123967)
RGD
PMID:20123967
NCBI chr 5:154,066,436...154,121,913
Ensembl chr 5:148,782,976...148,838,319
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Kdr
kinase insert domain receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:16375885)
Ensembl RGD
PMID:16375885
GO_REF:0000107
NCBI chr14:32,572,031...32,615,204
Ensembl chr14:32,217,871...32,261,018
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Lrp6
LDL receptor related protein 6
acts_upstream_of_or_within
ISO
MGI:4415718 (PMID:19700620)
RGD
PMID:19700620
NCBI chr 4:168,997,937...169,131,716
Ensembl chr 4:167,270,353...167,400,497
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Mir205
microRNA 205
acts_upstream_of_or_within
ISO
(PMID:23974039)
RGD
PMID:23974039
NCBI chr13:107,564,535...107,564,642
Ensembl chr13:105,035,878...105,035,985
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Mir320a
microRNA 320a
acts_upstream_of_or_within
ISO
(PMID:22925886)
RGD
PMID:22925886
NCBI chr15:51,926,088...51,926,169
Ensembl chr15:45,516,392...45,516,473
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Mir93
microRNA 93
acts_upstream_of
ISO
(PMID:28797104)
RGD
PMID:28797104
NCBI chr12:22,156,844...22,156,930
Ensembl chr12:17,043,135...17,043,221
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Nanog
Nanog homeobox
involved_in
ISO
(PMID:16501172)
RGD
PMID:16501172
NCBI chr 4:157,615,687...157,623,061
Ensembl chr 4:155,943,737...155,951,116
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Ngf
nerve growth factor
IDA
RGD
PMID:18846328
RGD:2303808
NCBI chr 2:192,589,580...192,642,971
Ensembl chr 2:189,901,058...189,954,452
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Nr2e1
nuclear receptor subfamily 2, group E, member 1
involved_in
ISO
(PMID:20123967)
RGD
PMID:20123967
NCBI chr20:47,632,347...47,653,464
Ensembl chr20:46,050,414...46,073,949
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Osr2
odd-skipped related transcription factor 2
acts_upstream_of_or_within
ISO
MGI:3033240 (PMID:15175245)
RGD
PMID:15175245
NCBI chr 7:66,487,841...66,495,003
Ensembl chr 7:66,487,839...66,495,224
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Pax3
paired box 3
acts_upstream_of_or_within
ISO
MGI:1856293 (PMID:10946068)
RGD
PMID:10946068
NCBI chr 9:87,015,960...87,112,531
Ensembl chr 9:79,568,634...79,664,042
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Pbx1
PBX homeobox 1
acts_upstream_of_or_within
ISO
MGI:2155612 (PMID:15944191), (PMID:22560297)
RGD
PMID:15944191 PMID:22560297
NCBI chr13:82,811,664...83,121,447
Ensembl chr13:80,278,770...80,588,594
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Prrx1
paired related homeobox 1
acts_upstream_of_or_within
ISO
MGI:98218 (PMID:11532916)
RGD
PMID:11532916
NCBI chr13:78,136,783...78,205,379
Ensembl chr13:75,601,706...75,670,866
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Prrx2
paired related homeobox 2
acts_upstream_of_or_within
ISO
MGI:97712 (PMID:11532916)
RGD
PMID:11532916
NCBI chr 3:14,132,574...14,168,533
Ensembl chr 3:14,094,004...14,168,535
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Ptprc
protein tyrosine phosphatase, receptor type, C
involved_in
ISO
(PMID:21911094)
RGD
PMID:21911094
NCBI chr13:52,147,717...52,259,810
Ensembl chr13:49,596,193...49,708,692
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Runx2
RUNX family transcription factor 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2176465 (PMID:15668330)
Ensembl RGD
PMID:15668330
GO_REF:0000107
NCBI chr 9:23,661,278...23,990,248
Ensembl chr 9:16,167,482...16,492,167
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Setd1a
SET domain containing 1A, histone lysine methyltransferase
acts_upstream_of_or_within
ISO
MGI:5568941 (PMID:24550110)
RGD
PMID:24550110
NCBI chr 1:191,818,752...191,842,167
Ensembl chr 1:182,388,060...182,411,090
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Shox2
SHOX homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3626291 (PMID:18514492)
Ensembl RGD
PMID:18514492
GO_REF:0000107
NCBI chr 2:153,524,324...153,537,571
Ensembl chr 2:151,217,552...151,227,143
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Sirt6
sirtuin 6
involved_in
ISO
(PMID:16439206)
RGD
PMID:16439206
NCBI chr 7:8,733,056...8,738,543
Ensembl chr 7:8,082,364...8,098,914
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Sox11
SRY-box transcription factor 11
involved_in
ISS ISO
GO_REF:0000024 (PMID:20626275)
UniProt RGD
PMID:20626275
GO_REF:0000024
NCBI chr 6:49,736,773...49,738,794
Ensembl chr 6:44,008,340...44,010,354
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Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
MGI:2385468|MGI:2450311|MGI:3841145 (PMID:17350610), (PMID:20346939)
RGD
PMID:17350610 PMID:20346939
NCBI chr10:98,305,744...98,311,250
Ensembl chr10:97,806,485...97,811,994
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Taf4b
TATA-box binding protein associated factor 4b
involved_in
ISO
(PMID:23350932)
RGD
PMID:23350932
NCBI chr18:5,952,737...6,086,408
Ensembl chr18:5,952,769...6,068,307
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Tbx18
T-box transcription factor 18
acts_upstream_of_or_within
ISO
MGI:3044914 (PMID:16511601)
RGD
PMID:16511601
NCBI chr 8:97,531,960...97,559,988
Ensembl chr 8:88,652,054...88,680,058
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Tbx3
T-box transcription factor 3
acts_upstream_of_or_within
ISO
MGI:3769504 (PMID:18356246)
RGD
PMID:18356246
NCBI chr12:42,540,378...42,555,490
Ensembl chr12:36,881,445...36,893,708
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Tert
telomerase reverse transcriptase
involved_in
ISO
(PMID:16037417), (PMID:16107853)
RGD
PMID:16037417 PMID:16107853
NCBI chr 1:31,465,766...31,488,650
Ensembl chr 1:29,637,506...29,659,561
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Tgfb1
transforming growth factor, beta 1
acts_upstream_of_or_within
ISO
(PMID:15604101)
RGD
PMID:15604101
NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847
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Tial1
Tia1 cytotoxic granule-associated RNA binding protein-like 1
acts_upstream_of_or_within
ISO
MGI:2660803 (PMID:9482885)
RGD
PMID:9482885
NCBI chr 1:192,438,794...192,475,520
Ensembl chr 1:183,009,253...183,031,637
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Tlx1
T-cell leukemia, homeobox 1
acts_upstream_of_or_within
ISO
MGI:1857260 (PMID:15944191)
RGD
PMID:15944191
NCBI chr 1:253,954,197...253,960,458
Ensembl chr 1:244,005,057...244,011,318
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Tp63
tumor protein p63
acts_upstream_of_or_within
ISO
MGI:1916323 (PMID:24075906)
RGD
PMID:24075906
NCBI chr11:88,343,647...88,554,543
Ensembl chr11:74,838,859...75,049,398
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Wnt5a
Wnt family member 5A
acts_upstream_of_or_within
ISO
MGI:1857617 (PMID:19100728)
RGD
PMID:19100728
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
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Ace
angiotensin I converting enzyme
involved_in
IEA ISO
GO_REF:0000107 (PMID:20116413)
Ensembl RGD
PMID:20116413
GO_REF:0000107
NCBI chr10:91,410,129...91,430,246
Ensembl chr10:90,910,316...90,931,131
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Eif2ak2
eukaryotic translation initiation factor 2-alpha kinase 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:23403623)
UniProt RGD
PMID:23403623
GO_REF:0000024
NCBI chr 6:21,941,147...21,977,115
Ensembl chr 6:16,188,979...16,224,971
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Mecom
MDS1 and EVI1 complex locus
acts_upstream_of_or_within
ISO
MGI:1857461 (PMID:15889140)
RGD
PMID:15889140
NCBI chr 2:114,837,815...115,393,052
Ensembl chr 2:112,909,321...113,464,590
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Pim1
Pim-1 proto-oncogene, serine/threonine kinase
involved_in
ISO
(PMID:23495171)
RGD
PMID:23495171
NCBI chr20:7,556,496...7,560,747
Ensembl chr20:7,554,921...7,559,174
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Ago3
argonaute RISC catalytic component 3
involved_in
ISO
(PMID:23064648)
RGD
PMID:23064648
NCBI chr 5:138,632,367...138,714,230
Ensembl chr 5:138,639,569...138,714,230
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Dgcr8
DGCR8 microprocessor complex subunit
acts_upstream_of_or_within
ISO
MGI:3819698 (PMID:21609717)
RGD
PMID:21609717
NCBI chr11:96,208,959...96,241,560
Ensembl chr11:82,704,729...82,737,242
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Fgfr1
Fibroblast growth factor receptor 1
IMP
RGD
PMID:18690792
RGD:2325179
NCBI chr16:73,194,631...73,249,855
Ensembl chr16:66,494,042...66,547,350
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Hmgb2
high mobility group box 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:24391977)
AgBase RGD
PMID:24391977
GO_REF:0000024
NCBI chr16:37,721,374...37,723,950
Ensembl chr16:32,710,658...32,713,140 Ensembl chr 1:32,710,658...32,713,140
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Hmgb2l1
high mobility group box 2-like 1
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr11:60,721,545...60,722,608
Ensembl chr11:47,252,569...47,253,669 Ensembl chr 1:47,252,569...47,253,669
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Hmgb2l2
high mobility group box 2 like 2
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr14:73,258,013...73,258,780
Ensembl chr14:69,045,641...69,046,640 Ensembl chr 1:69,045,641...69,046,640
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Mpl
MPL proto-oncogene, thrombopoietin receptor
acts_upstream_of_or_within
ISO
MGI:2686901 (PMID:20711984)
RGD
PMID:20711984
NCBI chr 5:137,259,288...137,281,540
Ensembl chr 5:131,973,895...131,986,797
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Ncoa3
nuclear receptor coactivator 3
acts_upstream_of_or_within
ISO
(PMID:22977234)
RGD
PMID:22977234
NCBI chr 3:175,157,824...175,237,831
Ensembl chr 3:154,738,581...154,818,594
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Nf2
NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:103262|MGI:1926955 (PMID:25433207)
Ensembl RGD
PMID:25433207
GO_REF:0000107
NCBI chr14:83,850,894...83,934,263
Ensembl chr14:79,627,399...79,710,667
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Notch1
notch receptor 1
acts_upstream_of_or_within
ISO
MGI:2684314|MGI:2684317 (PMID:16107537)
RGD
PMID:16107537
NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
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Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:12221011)
Ensembl RGD
PMID:12221011
GO_REF:0000107
NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170
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Sox17
SRY-box transcription factor 17
acts_upstream_of_or_within
ISO
(PMID:20228271)
RGD
PMID:20228271
NCBI chr 5:19,814,345...19,819,859
Ensembl chr 5:15,016,731...15,022,228
G
Sox18
SRY-box transcription factor 18
acts_upstream_of_or_within
ISO
(PMID:20228271)
RGD
PMID:20228271
NCBI chr 3:189,163,000...189,164,802
Ensembl chr 3:168,785,490...168,787,290
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Tgfbr2
transforming growth factor, beta receptor 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2384511 (PMID:12975342)
Ensembl RGD
PMID:12975342
GO_REF:0000107
NCBI chr 8:124,672,677...124,761,741
Ensembl chr 8:115,794,537...115,883,228
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Yap1
Yes1 associated transcriptional regulator
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:25433207) MGI:97307 (PMID:19853564), (PMID:19952108), (PMID:25433207) GO_REF:0000107
RGD Ensembl
PMID:19853564 PMID:19952108 PMID:25433207
GO_REF:0000107
NCBI chr 8:13,380,551...13,451,640
Ensembl chr 8:5,095,722...5,167,010
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Zfp36l1
zinc finger protein 36, C3H type-like 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:24733888)
UniProt RGD
PMID:24733888
GO_REF:0000024
NCBI chr 6:104,663,396...104,669,815
Ensembl chr 6:98,930,718...98,935,748
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