ONTOLOGY REPORT - ANNOTATIONS
Term: nephron epithelium morphogenesis
Accession: GO:0072088
browse the term
Definition: The process in which the anatomical structures of the nephron epithelium are generated and organized. The nephron epithelium is a tissue that covers the surface of a nephron.
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Fgf1
fibroblast growth factor 1
involved_in
ISO ISS
(PMID:11731227) GO_REF:0000024
RGD UniProt
PMID:11731227
GO_REF:0000024
NCBI chr18:30,937,670...31,023,786
Ensembl chr18:30,686,581...30,772,357
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Adamts16
ADAM metallopeptidase with thrombospondin type 1 motif, 16
acts_upstream_of_or_within
ISO
(PMID:23661704)
RGD
PMID:23661704
NCBI chr 1:34,258,899...34,388,952
Ensembl chr 1:32,430,436...32,560,494
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Agt
angiotensinogen
NOT|acts_upstream_of_or_within
ISO
MGI:2183545 (PMID:8675666) (PMID:12657564)
RGD
PMID:8675666 PMID:12657564
NCBI chr19:69,426,540...69,447,017
Ensembl chr19:52,529,185...52,540,977
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Bcl2
BCL2, apoptosis regulator
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:97486 (PMID:14699151), (PMID:16672320)
Ensembl RGD
PMID:14699151 PMID:16672320
GO_REF:0000107
NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
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Bmp2
bone morphogenetic protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:104903 (PMID:15925496)
Ensembl RGD
PMID:15925496
GO_REF:0000107
NCBI chr 3:141,264,648...141,275,416
Ensembl chr 3:120,812,882...120,821,397
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Bmp4
bone morphogenetic protein 4
involved_in acts_upstream_of_or_within
ISO IEA ISS
(PMID:12631064) MGI:1344337 (PMID:17522159) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:12631064 PMID:17522159
GO_REF:0000024 GO_REF:0000107
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
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Cd44
CD44 molecule
acts_upstream_of_or_within
ISO
(PMID:10926769)
RGD
PMID:10926769
NCBI chr 3:109,610,824...109,699,776
Ensembl chr 3:89,157,058...89,244,620
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Cited1
Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
involved_in NOT|involved_in
IMP ISO
PMID:15843474 (PMID:17615577)
RGD
PMID:17615577 PMID:15843474
RGD:8554075
NCBI chr X:71,390,328...71,395,023
Ensembl chr X:67,350,373...67,355,162
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Cited2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
NOT|involved_in
ISO
(PMID:17615577)
RGD
PMID:17615577
NCBI chr 1:14,132,303...14,134,746
Ensembl chr 1:12,312,160...12,314,897
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Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1858008 (PMID:17537789)
Ensembl RGD
PMID:17537789
GO_REF:0000107
NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111
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Ctnnbip1
catenin, beta-interacting protein 1
acts_upstream_of_or_within
ISO
MGI:3045424 (PMID:17803964)
RGD
PMID:17803964
NCBI chr 5:165,245,019...165,293,994
Ensembl chr 5:159,961,928...160,010,939
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Dchs1
dachsous cadherin-related 1
acts_upstream_of_or_within
ISO
MGI:4867020 (PMID:21303848)
RGD
PMID:21303848
NCBI chr 1:169,516,758...169,550,789
Ensembl chr 1:160,104,931...160,124,808
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Dlg1
discs large MAGUK scaffold protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2680670|MGI:3699270|MGI:3710242 (PMID:16105026), (PMID:17172448), (PMID:17435047)
Ensembl RGD
PMID:16105026 PMID:17172448 PMID:17435047
GO_REF:0000107
NCBI chr11:82,416,853...82,607,797
Ensembl chr11:68,911,883...69,102,689
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Dspp
dentin sialophosphoprotein
acts_upstream_of_or_within
ISO
MGI:2653208 (PMID:16937369)
RGD
PMID:16937369
NCBI chr14:5,870,232...5,876,339
Ensembl chr14:5,565,629...5,571,672
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Eya1
EYA transcriptional coactivator and phosphatase 1
acts_upstream_of_or_within
ISO
MGI:102780 (PMID:12783782)
RGD
PMID:12783782
NCBI chr 5:9,646,599...9,884,609
Ensembl chr 5:4,955,543...5,101,483
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Fat4
FAT atypical cadherin 4
acts_upstream_of_or_within
ISO
MGI:3846573 (PMID:21303848)
RGD
PMID:21303848
NCBI chr 2:123,855,289...123,984,716
Ensembl chr 2:121,927,942...122,056,707
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Fgf2
fibroblast growth factor 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:12631064)
UniProt RGD
PMID:12631064
GO_REF:0000024
NCBI chr 2:122,164,454...122,218,796
Ensembl chr 2:120,236,328...120,291,221
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Fgf8
fibroblast growth factor 8
acts_upstream_of_or_within
ISO
MGI:2150348 (PMID:16049111)
RGD
PMID:16049111
NCBI chr 1:254,533,504...254,539,605
Ensembl chr 1:244,584,652...244,590,359
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Foxd1
forkhead box D1
acts_upstream_of_or_within
ISO
(PMID:13678594)
RGD
PMID:13678594
NCBI chr 2:31,436,802...31,439,222
Ensembl chr 2:29,702,558...29,704,978
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Gdnf
glial cell derived neurotrophic factor
involved_in acts_upstream_of_or_within
IEA ISO ISS
GO_REF:0000107 (PMID:8657307) (PMID:13678594), (PMID:21281623) GO_REF:0000024
Ensembl RGD UniProt
PMID:8657307 PMID:13678594 PMID:21281623
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:56,895,010...56,917,209
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Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:98297 (PMID:16396903)
RGD
PMID:16396903
NCBI chr17:54,134,064...54,405,198
Ensembl chr17:49,438,567...49,709,712
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Gpc3
glypican 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:88177|MGI:894293 (PMID:15925496)
Ensembl RGD
PMID:15925496
GO_REF:0000107
NCBI chr X:136,789,770...137,157,598
Ensembl chr X:131,868,990...132,236,798
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Greb1l
GREB1 like retinoic acid receptor coactivator
acts_upstream_of_or_within
ISO
(PMID:29100091)
RGD
PMID:29100091
NCBI chr18:1,665,468...1,902,291
Ensembl chr18:1,392,725...1,628,067
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Gzf1
GDNF-inducible zinc finger protein 1
acts_upstream_of_or_within
ISO
(PMID:14522971)
RGD
PMID:14522971
NCBI chr 3:136,119,004...136,131,223
Ensembl chr 3:136,119,113...136,131,223
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Hoxa11
homeobox A11
acts_upstream_of_or_within
ISO
MGI:96203 (PMID:11493536)
RGD
PMID:11493536
NCBI chr 4:81,342,527...81,346,189
Ensembl chr 4:81,342,528...81,346,232
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Hoxd11
homeobox D11
acts_upstream_of_or_within
ISO
MGI:96172 (PMID:11493536)
RGD
PMID:11493536
NCBI chr 3:59,584,840...59,587,257
Ensembl chr 3:59,585,039...59,586,783
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Hs3st3a1
heparan sulfate-glucosamine 3-sulfotransferase 3A1
involved_in
ISO
MGI:1333853 (PMID:32017326)
RGD
PMID:32017326
NCBI chr10:49,092,850...49,180,676
Ensembl chr10:49,094,026...49,180,676
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Hs3st3b1
heparan sulfate-glucosamine 3-sulfotransferase 3B1
involved_in
ISO
MGI:1333861 (PMID:32017326)
RGD
PMID:32017326
NCBI chr10:49,060,693...49,093,185
Ensembl chr10:48,561,473...48,593,970
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Ilk
integrin-linked kinase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:15831470)
Ensembl RGD
PMID:15831470
GO_REF:0000107
NCBI chr 1:169,500,716...169,506,972
Ensembl chr 1:160,088,897...160,095,140
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Lama5
laminin subunit alpha 5
acts_upstream_of_or_within
ISO
(PMID:14568553)
RGD
PMID:14568553
NCBI chr 3:187,647,904...187,695,974
Ensembl chr 3:167,270,296...167,318,451
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Lhx1
LIM homeobox 1
involved_in
ISO
(PMID:7909549)
RGD
PMID:7909549
NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
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Myc
MYC proto-oncogene, bHLH transcription factor
involved_in
ISS ISO
GO_REF:0000024 (PMID:19161241)
UniProt RGD
PMID:19161241
GO_REF:0000024
NCBI chr 7:95,483,105...95,488,031
Ensembl chr 7:93,593,705...93,598,630
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Npnt
nephronectin
acts_upstream_of_or_within
ISO
MGI:3715213 (PMID:17537792)
RGD
PMID:17537792
NCBI chr 2:224,065,191...224,133,567
Ensembl chr 2:221,391,153...221,459,401
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Pax2
paired box 2
involved_in acts_upstream_of_or_within
ISO ISS
(PMID:1337742) MGI:1857114|MGI:88138 (PMID:16672320) GO_REF:0000024
RGD UniProt
PMID:1337742 PMID:16672320
GO_REF:0000024
NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:243,616,606...243,695,321
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Pax8
paired box 8
involved_in
ISO
(PMID:1337742)
RGD
PMID:1337742
NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:7,185,723...7,242,363
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Pbx1
PBX homeobox 1
acts_upstream_of_or_within
ISO
(PMID:12591246)
RGD
PMID:12591246
NCBI chr13:82,811,664...83,121,447
Ensembl chr13:80,278,770...80,588,594
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Pgf
placental growth factor
acts_upstream_of_or_within
ISO
(PMID:13678594)
RGD
PMID:13678594
NCBI chr 6:110,547,165...110,557,747
Ensembl chr 6:104,816,104...104,826,685
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Pkd2
polycystin 2, transient receptor potential cation channel
involved_in
ISO
(PMID:11891195)
RGD
PMID:11891195
NCBI chr14:5,541,821...5,585,140
Ensembl chr14:5,237,135...5,280,825
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Pspn
persephin
acts_upstream_of_or_within
ISO
(PMID:9491986)
RGD
PMID:9491986
NCBI chr 9:1,840,906...1,841,748
Ensembl chr 9:1,840,896...1,854,327
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Ptch1
patched 1
acts_upstream_of_or_within
ISO
MGI:1857447 (PMID:19809516)
RGD
PMID:19809516
NCBI chr17:1,548,449...1,613,461
Ensembl chr17:1,542,877...1,607,333
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Sall1
spalt-like transcription factor 1
acts_upstream_of involved_in
ISO
MGI:3603818 (PMID:24550112) (PMID:12482961)
RGD
PMID:12482961 PMID:24550112
NCBI chr19:34,179,316...34,196,278
Ensembl chr19:18,007,503...18,022,705
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Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
ISS ISO IEA
GO_REF:0000024 MGI:1857796 (PMID:16396903) GO_REF:0000107
UniProt RGD Ensembl
PMID:16396903
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:7,687,872...7,697,025
Ensembl chr 4:6,954,017...6,963,170
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Six1
SIX homeobox 1
acts_upstream_of_or_within
ISO
MGI:109344 (PMID:12783782)
RGD
PMID:12783782
NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:91,746,739...91,751,975
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Smad4
SMAD family member 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:104903|MGI:88177 (PMID:15925496)
Ensembl RGD
PMID:15925496
GO_REF:0000107
NCBI chr18:69,518,988...69,549,684
Ensembl chr18:67,243,742...67,274,438
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Sox9
SRY-box transcription factor 9
involved_in
ISO
(PMID:8787755)
RGD
PMID:8787755
NCBI chr10:98,305,744...98,311,250
Ensembl chr10:97,806,485...97,811,994
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Tcf21
transcription factor 21
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2148207 (PMID:10572052), (PMID:9507058)
UniProt RGD
PMID:9507058 PMID:10572052
GO_REF:0000024
NCBI chr 1:24,520,499...24,523,358
Ensembl chr 1:22,701,353...22,704,202
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Timeless
timeless circadian regulator
acts_upstream_of_or_within
IMP
PMID:10963667
RGD MGI
PMID:10963667 PMID:10963667
RGD:2308864 , RGD:2308864
NCBI chr 7:1,239,388...1,263,344
Ensembl chr 7:654,822...678,738
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Tmem59l
transmembrane protein 59-like
involved_in
IEA ISO
GO_REF:0000107 MGI:6441470 (PMID:32017326)
Ensembl RGD
PMID:32017326
GO_REF:0000107
NCBI chr16:18,941,370...18,945,381
Ensembl chr16:18,941,567...18,945,381
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Wnt1
Wnt family member 1
acts_upstream_of_or_within
ISO
MGI:1197020 (PMID:16054034)
RGD
PMID:16054034
NCBI chr 7:131,817,558...131,821,605
Ensembl chr 7:129,938,604...129,942,651
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Wnt4
Wnt family member 4
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:16054034) GO_REF:0000107
RGD Ensembl
PMID:16054034
GO_REF:0000107
NCBI chr 5:154,797,245...154,818,565
Ensembl chr 5:149,514,018...149,532,859
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Wnt6
Wnt family member 6
acts_upstream_of_or_within
ISO
MGI:98957 (PMID:11948913)
RGD
PMID:11948913
NCBI chr 9:83,778,552...83,792,186
Ensembl chr 9:76,329,882...76,343,523
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Wnt9b
Wnt family member 9B
acts_upstream_of_or_within
ISO
MGI:3526437|MGI:98953 (PMID:16054034)
RGD
PMID:16054034
NCBI chr10:89,135,362...89,157,065
Ensembl chr10:88,635,331...88,657,035
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Wt1
WT1 transcription factor
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:10101119) GO_REF:0000107 UniProtKB:P22561 (PMID:10101119)
UniProt RGD Ensembl
PMID:10101119
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:112,019,721...112,068,454
Ensembl chr 3:91,567,001...91,613,643
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Foxd1
forkhead box D1
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:15634693) GO_REF:0000107
UniProt RGD Ensembl
PMID:15634693
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:31,436,802...31,439,222
Ensembl chr 2:29,702,558...29,704,978
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Klhl3
kelch-like family member 3
involved_in
ISO IEA ISS
(PMID:22406640), (PMID:23453970), (PMID:23576762) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:22406640 PMID:23453970 PMID:23576762
GO_REF:0000024 GO_REF:0000107
NCBI chr17:6,528,114...6,651,338
Ensembl chr17:6,521,912...6,642,154
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Wnk4
WNK lysine deficient protein kinase 4
involved_in
ISO ISS
(PMID:23453970), (PMID:23576762) GO_REF:0000024
RGD UniProt
PMID:23453970 PMID:23576762
GO_REF:0000024
NCBI chr10:86,702,828...86,719,917
Ensembl chr10:86,188,812...86,231,829
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Smo
smoothened, frizzled class receptor
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:16396903) GO_REF:0000024
Ensembl RGD UniProt
PMID:16396903
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:59,311,084...59,341,280
Ensembl chr 4:58,343,529...58,373,829
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Gdnf
glial cell derived neurotrophic factor
involved_in
IEA ISO IDA
GO_REF:0000107 (PMID:10322633) PMID:17522159
Ensembl RGD
PMID:10322633 PMID:17522159
GO_REF:0000107, RGD:8656002
NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:56,895,010...56,917,209
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Grem1
gremlin 1, DAN family BMP antagonist
involved_in
ISO
(PMID:17522159)
RGD
PMID:17522159
NCBI chr 3:120,966,639...120,978,319
Ensembl chr 3:100,512,313...100,524,082
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Pax2
paired box 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:10322633)
UniProt RGD
PMID:10322633
GO_REF:0000024
NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:243,616,606...243,695,321
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Pax8
paired box 8
involved_in
ISO
(PMID:8861958)
RGD
PMID:8861958
NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:7,185,723...7,242,363
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Sall1
spalt-like transcription factor 1
involved_in acts_upstream_of
ISO
(PMID:11511981) (PMID:11688560) MGI:3603818 (PMID:24550112)
RGD
PMID:11511981 PMID:11688560 PMID:24550112
NCBI chr19:34,179,316...34,196,278
Ensembl chr19:18,007,503...18,022,705
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Six2
SIX homeobox 2
involved_in
ISO
(PMID:10322633)
RGD
PMID:10322633
NCBI chr 6:14,727,756...14,734,219
Ensembl chr 6:8,967,157...8,981,193
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Hnf1b
HNF1 homeobox B
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857856 (PMID:20040500)
Ensembl RGD
PMID:20040500
GO_REF:0000107
NCBI chr10:69,233,377...69,287,360
Ensembl chr10:68,735,894...68,789,888
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Mir216a
microRNA 216a
involved_in
ISO
MGI:6361469 (PMID:31367007)
RGD
PMID:31367007
NCBI chr14:102,524,105...102,524,210
Ensembl chr14:102,524,105...102,524,210
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Mir216b
microRNA 216b
involved_in
ISO
MGI:6361477 (PMID:31367007)
RGD
PMID:31367007
NCBI chr14:102,513,054...102,513,155
Ensembl chr14:102,513,054...102,513,155
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Mir217
microRNA 217
involved_in
ISO
(PMID:31367007)
RGD
PMID:31367007
NCBI chr14:106,732,485...106,732,589
Ensembl chr14:102,531,505...102,531,609
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Wnt9b
Wnt family member 9B
acts_upstream_of_or_within
ISO
MGI:3526437 (PMID:16054034)
RGD
PMID:16054034
NCBI chr10:89,135,362...89,157,065
Ensembl chr10:88,635,331...88,657,035
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Gpc3
glypican 3
involved_in acts_upstream_of_or_within
ISS ISO IEA
GO_REF:0000024 MGI:2159356 (PMID:11180950) GO_REF:0000107
UniProt RGD Ensembl
PMID:11180950
GO_REF:0000024 GO_REF:0000107
NCBI chr X:136,789,770...137,157,598
Ensembl chr X:131,868,990...132,236,798
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Osr1
odd-skipped related transcription factor 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:16790474)
UniProt RGD
PMID:16790474
GO_REF:0000024
NCBI chr 6:38,088,688...38,100,010
Ensembl chr 6:32,373,816...32,380,817
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Pax2
paired box 2
involved_in
ISO
(PMID:17300925)
RGD
PMID:17300925
NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:243,616,606...243,695,321
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Six1
SIX homeobox 1
involved_in
ISO
(PMID:17300925)
RGD
PMID:17300925
NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:91,746,739...91,751,975
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Pkd1
polycystin 1, transient receptor potential channel interacting
involved_in
ISO
(PMID:11891195)
RGD
PMID:11891195
NCBI chr10:14,077,733...14,125,682
Ensembl chr10:13,573,021...13,621,128
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Pax2
paired box 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:17314325)
UniProt RGD
PMID:17314325
GO_REF:0000024
NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:243,616,606...243,695,321
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Pax8
paired box 8
involved_in
ISS ISO
GO_REF:0000024 (PMID:17314325)
UniProt RGD
PMID:17314325
GO_REF:0000024
NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:7,185,723...7,242,363
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Sox8
SRY-box transcription factor 8
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:98371 (PMID:21212101)
UniProt RGD
PMID:21212101
GO_REF:0000024
NCBI chr10:15,089,357...15,094,345
Ensembl chr10:14,584,829...14,589,818
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Sox9
SRY-box transcription factor 9
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:98370 (PMID:21212101)
UniProt RGD
PMID:21212101
GO_REF:0000024
NCBI chr10:98,305,744...98,311,250
Ensembl chr10:97,806,485...97,811,994
G
Hes1
hes family bHLH transcription factor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:15465493)
Ensembl RGD
PMID:15465493
GO_REF:0000107
NCBI chr11:84,210,632...84,213,045
Ensembl chr11:70,705,764...70,708,192
G
Hes5
hes family bHLH transcription factor 5
involved_in
ISO
(PMID:15465493)
RGD
PMID:15465493
NCBI chr 5:170,804,511...170,807,988
Ensembl chr 5:165,522,234...165,523,001
G
Lgr4
leucine-rich repeat-containing G protein-coupled receptor 4
involved_in
ISO
(PMID:21523854)
RGD
PMID:21523854
NCBI chr 3:116,901,968...117,004,584
Ensembl chr 3:96,447,858...96,548,899
G
Lhx1
LIM homeobox 1
involved_in
ISO
(PMID:7909549)
RGD
PMID:7909549
NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
G
Bmp4
bone morphogenetic protein 4
involved_in acts_upstream_of_or_within
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (PMID:12141440) MGI:102780 (PMID:21281623) (PMID:15634693)
Ensembl UniProt RGD
PMID:12141440 PMID:15634693 PMID:21281623
GO_REF:0000024 GO_REF:0000107
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
G
Tacstd2
tumor-associated calcium signal transducer 2
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:22194864) GO_REF:0000024
Ensembl RGD UniProt
PMID:22194864
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:98,037,620...98,039,320
Ensembl chr 4:96,707,951...96,709,650
G
Gata3
GATA binding protein 3
involved_in
ISO
(PMID:19112489)
RGD
PMID:19112489
NCBI chr17:73,544,234...73,575,670
Ensembl chr17:68,643,873...68,665,391
G
Gata3
GATA binding protein 3
involved_in
ISO
(PMID:19112489)
RGD
PMID:19112489
NCBI chr17:73,544,234...73,575,670
Ensembl chr17:68,643,873...68,665,391
G
Cited1
Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
involved_in
IMP
PMID:15843474
UniProt
PMID:15843474
RGD:8554075
NCBI chr X:71,390,328...71,395,023
Ensembl chr X:67,350,373...67,355,162
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:17537789)
Ensembl RGD
PMID:17537789
GO_REF:0000107
NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111
G
Sall1
spalt-like transcription factor 1
acts_upstream_of_or_within
ISO
MGI:3603818 (PMID:24550112)
RGD
PMID:24550112
NCBI chr19:34,179,316...34,196,278
Ensembl chr19:18,007,503...18,022,705
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1858008 (PMID:17537789)
Ensembl RGD
PMID:17537789
GO_REF:0000107
NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111
G
Wnt6
Wnt family member 6
acts_upstream_of_or_within
ISO
(PMID:11948913)
RGD
PMID:11948913
NCBI chr 9:83,778,552...83,792,186
Ensembl chr 9:76,329,882...76,343,523
G
Wnt9b
Wnt family member 9B
acts_upstream_of_or_within
ISO
MGI:3526437|MGI:3805020 (PMID:19543268)
RGD
PMID:19543268
NCBI chr10:89,135,362...89,157,065
Ensembl chr10:88,635,331...88,657,035
G
Agt
angiotensinogen
involved_in
ISO IEA
(PMID:18607644) GO_REF:0000107
RGD Ensembl
PMID:18607644
GO_REF:0000107
NCBI chr19:69,426,540...69,447,017
Ensembl chr19:52,529,185...52,540,977
G
Agtr1a
angiotensin II receptor, type 1a
involved_in
IMP
PMID:17537984
UniProt
PMID:17537984
RGD:1643596
NCBI chr17:34,383,397...34,435,523
Ensembl chr17:34,174,429...34,226,946
G
Agtr1b
angiotensin II receptor, type 1b
involved_in
IMP
PMID:17537984
UniProt
PMID:17537984
RGD:1643596
NCBI chr 2:104,774,005...104,849,262
Ensembl chr 2:102,844,969...102,920,232
G
Agtr2
angiotensin II receptor, type 2
involved_in
IMP ISO
PMID:17537984 (PMID:18607644)
RGD
PMID:18607644 PMID:17537984
RGD:1643596
NCBI chr X:116,914,320...116,918,504
Ensembl chr X:112,120,228...112,124,057
G
Bmp4
bone morphogenetic protein 4
involved_in
IMP
PMID:17537984
UniProt
PMID:17537984
RGD:1643596
NCBI chr15:22,098,191...22,113,145
Ensembl chr15:19,618,542...19,623,306
G
Gdnf
glial cell derived neurotrophic factor
involved_in
IMP ISO IBA IEA IDA
PMID:17537984 (PMID:17229286) GO_REF:0000033 GO_REF:0000107 PMID:17522159 (PMID:17229286), (PMID:8657307)
RGD GO_Central Ensembl
PMID:8657307 PMID:17229286 PMID:17537984 PMID:17522159
GO_REF:0000033 GO_REF:0000107, RGD:1643596 , RGD:8656002
NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:56,895,010...56,917,209
G
Grem1
gremlin 1, DAN family BMP antagonist
acts_upstream_of_or_within involved_in
ISO
MGI:88180 (PMID:17522159), (PMID:21281623)
RGD
PMID:17522159 PMID:21281623
NCBI chr 3:120,966,639...120,978,319
Ensembl chr 3:100,512,313...100,524,082
G
Hoxb7
homeo box B7
involved_in
ISO
(PMID:17881463)
RGD
PMID:17881463
NCBI chr10:81,252,616...81,256,034
Ensembl chr10:81,252,553...81,256,034
G
Lgr4
leucine-rich repeat-containing G protein-coupled receptor 4
involved_in
ISO
(PMID:21523854)
RGD
PMID:21523854
NCBI chr 3:116,901,968...117,004,584
Ensembl chr 3:96,447,858...96,548,899
G
Lhx1
LIM homeobox 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:16216236)
UniProt RGD
PMID:16216236
GO_REF:0000024
NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
G
Maged1
MAGE family member D1
involved_in
ISO
(PMID:19268530)
RGD
PMID:19268530
NCBI chr X:59,422,715...59,429,381
Ensembl chr X:59,422,717...59,429,364
G
Nog
noggin
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:12141440), (PMID:17522159) GO_REF:0000024
Ensembl RGD UniProt
PMID:12141440 PMID:17522159
GO_REF:0000024 GO_REF:0000107
NCBI chr10:74,625,874...74,627,501
Ensembl chr10:74,128,712...74,130,339
G
Pax2
paired box 2
involved_in
ISO
(PMID:17314325), (PMID:17881463)
RGD
PMID:17314325 PMID:17881463
NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:243,616,606...243,695,321
G
Pax8
paired box 8
involved_in
ISS ISO
GO_REF:0000024 (PMID:17314325)
UniProt RGD
PMID:17314325
GO_REF:0000024
NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:7,185,723...7,242,363
G
Sall1
spalt-like transcription factor 1
acts_upstream_of_or_within
ISO
MGI:3603818 (PMID:24550112)
RGD
PMID:24550112
NCBI chr19:34,179,316...34,196,278
Ensembl chr19:18,007,503...18,022,705
G
Six1
SIX homeobox 1
acts_upstream_of_or_within involved_in
ISO
MGI:88180 (PMID:21281623) (PMID:17300925)
RGD
PMID:17300925 PMID:21281623
NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:91,746,739...91,751,975
G
Six4
SIX homeobox 4
involved_in
ISO
(PMID:17300925)
RGD
PMID:17300925
NCBI chr 6:97,538,202...97,551,872
Ensembl chr 6:91,802,329...91,815,992
G
Smo
smoothened, frizzled class receptor
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:16396903) GO_REF:0000107
UniProt RGD Ensembl
PMID:16396903
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:59,311,084...59,341,280
Ensembl chr 4:58,343,529...58,373,829
G
Sox8
SRY-box transcription factor 8
involved_in
ISS ISO
GO_REF:0000024 (PMID:21212101)
UniProt RGD
PMID:21212101
GO_REF:0000024
NCBI chr10:15,089,357...15,094,345
Ensembl chr10:14,584,829...14,589,818
G
Sox9
SRY-box transcription factor 9
involved_in
ISS ISO
GO_REF:0000024 (PMID:21212101)
UniProt RGD
PMID:21212101
GO_REF:0000024
NCBI chr10:98,305,744...98,311,250
Ensembl chr10:97,806,485...97,811,994
G
Tgfb1
transforming growth factor, beta 1
involved_in
IMP
PMID:17537984
UniProt
PMID:17537984
RGD:1643596
NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847
G
Vegfa
vascular endothelial growth factor A
involved_in
ISO
(PMID:16291795)
RGD
PMID:16291795
NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:14,955,300...14,970,641
G
Wnt2b
Wnt family member 2B
acts_upstream_of_or_within
ISO
(PMID:11507767)
RGD
PMID:11507767
NCBI chr 2:195,142,573...195,156,945
Ensembl chr 2:192,453,824...192,470,308
G
Gdnf
glial cell derived neurotrophic factor
involved_in
IEA ISO
GO_REF:0000107 (PMID:8657306)
Ensembl RGD
PMID:8657306
GO_REF:0000107
NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:56,895,010...56,917,209
G
Lif
LIF, interleukin 6 family cytokine
involved_in
ISO IEA
(PMID:20624457) GO_REF:0000107
RGD Ensembl
PMID:20624457
GO_REF:0000107
NCBI chr14:83,354,602...83,364,053
Ensembl chr14:79,134,574...79,140,482
G
Pax2
paired box 2
involved_in
ISS ISO
GO_REF:0000024 UniProtKB:Q00288 (PMID:12435636)
UniProt RGD
PMID:12435636
GO_REF:0000024
NCBI chr 1:253,555,447...253,646,623
Ensembl chr 1:243,616,606...243,695,321
G
Pax8
paired box 8
involved_in
ISS ISO
GO_REF:0000024 (PMID:12435636)
UniProt RGD
PMID:12435636
GO_REF:0000024
NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:7,185,723...7,242,363
G
Gata3
GATA binding protein 3
involved_in
ISO
(PMID:19112489)
RGD
PMID:19112489
NCBI chr17:73,544,234...73,575,670
Ensembl chr17:68,643,873...68,665,391
G
Gdnf
glial cell derived neurotrophic factor
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:8657307)
UniProt Ensembl RGD
PMID:8657307
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:56,895,010...56,917,209
G
Six1
SIX homeobox 1
involved_in
ISO
(PMID:17300925)
RGD
PMID:17300925
NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:91,746,739...91,751,975
G
Six4
SIX homeobox 4
involved_in
ISO
(PMID:17300925)
RGD
PMID:17300925
NCBI chr 6:97,538,202...97,551,872
Ensembl chr 6:91,802,329...91,815,992
G
Lzts2
leucine zipper tumor suppressor 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:5302222 (PMID:21949185)
Ensembl RGD
PMID:21949185
GO_REF:0000107
NCBI chr 1:253,824,073...253,837,614
Ensembl chr 1:243,880,022...243,888,423
G
Ahi1
Abelson helper integration site 1
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 1:17,580,859...17,711,775
Ensembl chr 1:15,762,462...15,891,041
G
Commd5
COMM domain containing 5
involved_in
IDA
PMID:24515317
UniProt
PMID:24515317
RGD:10047245
NCBI chr 7:108,621,766...108,623,616
Ensembl chr 7:108,598,673...108,624,764
G
Ctns
cystinosin, lysosomal cystine transporter
IMP
RGD
PMID:35695380
RGD:155630629
NCBI chr10:58,300,069...58,315,725
Ensembl chr10:57,801,456...57,817,120
G
Hnf1b
HNF1 homeobox B
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857856 (PMID:20040500)
Ensembl RGD
PMID:20040500
GO_REF:0000107
NCBI chr10:69,233,377...69,287,360
Ensembl chr10:68,735,894...68,789,888
G
Six1
SIX homeobox 1
involved_in
ISO
(PMID:17300925)
RGD
PMID:17300925
NCBI chr 6:97,482,617...97,487,853
Ensembl chr 6:91,746,739...91,751,975
G
Six4
SIX homeobox 4
involved_in
ISO
(PMID:17300925)
RGD
PMID:17300925
NCBI chr 6:97,538,202...97,551,872
Ensembl chr 6:91,802,329...91,815,992
G
Six2
SIX homeobox 2
involved_in
ISO
(PMID:17036046)
RGD
PMID:17036046
NCBI chr 6:14,727,756...14,734,219
Ensembl chr 6:8,967,157...8,981,193
G
Wnt9b
Wnt family member 9B
acts_upstream_of_or_within
ISO
MGI:3526437 (PMID:16054034)
RGD
PMID:16054034
NCBI chr10:89,135,362...89,157,065
Ensembl chr10:88,635,331...88,657,035
G
Gdnf
glial cell derived neurotrophic factor
involved_in
IDA
PMID:19112489
UniProt
PMID:19112489
RGD:8656008
NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:56,895,010...56,917,209
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1858008 (PMID:17537789)
Ensembl RGD
PMID:17537789
GO_REF:0000107
NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111
G
Wnt4
Wnt family member 4
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:16054034) GO_REF:0000107
RGD Ensembl
PMID:16054034
GO_REF:0000107
NCBI chr 5:154,797,245...154,818,565
Ensembl chr 5:149,514,018...149,532,859
G
Sox8
SRY-box transcription factor 8
involved_in
ISS ISO
GO_REF:0000024 (PMID:21212101)
UniProt RGD
PMID:21212101
GO_REF:0000024
NCBI chr10:15,089,357...15,094,345
Ensembl chr10:14,584,829...14,589,818
G
Sox9
SRY-box transcription factor 9
involved_in
ISS ISO
GO_REF:0000024 (PMID:21212101)
UniProt RGD
PMID:21212101
GO_REF:0000024
NCBI chr10:98,305,744...98,311,250
Ensembl chr10:97,806,485...97,811,994
G
Wnt4
Wnt family member 4
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:11507767) GO_REF:0000107
RGD Ensembl
PMID:11507767
GO_REF:0000107
NCBI chr 5:154,797,245...154,818,565
Ensembl chr 5:149,514,018...149,532,859
G
Lhx1
LIM homeobox 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:17610272)
UniProt RGD
PMID:17610272
GO_REF:0000024
NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
G
Osr1
odd-skipped related transcription factor 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:16790474)
UniProt RGD
PMID:16790474
GO_REF:0000024
NCBI chr 6:38,088,688...38,100,010
Ensembl chr 6:32,373,816...32,380,817
G
Hes5
hes family bHLH transcription factor 5
involved_in
ISO
(PMID:15821257)
RGD
PMID:15821257
NCBI chr 5:170,804,511...170,807,988
Ensembl chr 5:165,522,234...165,523,001
G
Irx1
iroquois homeobox 1
involved_in
ISO
(PMID:17875669)
RGD
PMID:17875669
NCBI chr 1:31,294,615...31,300,444
Ensembl chr 1:31,294,615...31,300,444
G
Irx2
iroquois homeobox 2
involved_in
ISO
(PMID:17875669)
RGD
PMID:17875669
NCBI chr 1:30,660,960...30,666,378
Ensembl chr 1:30,660,960...30,666,378
G
Irx3
iroquois homeobox 3
involved_in
ISO
(PMID:17875669)
RGD
PMID:17875669
NCBI chr19:31,384,803...31,388,241
Ensembl chr19:15,211,878...15,215,317
G
Osr1
odd-skipped related transcription factor 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:16790474)
UniProt RGD
PMID:16790474
GO_REF:0000024
NCBI chr 6:38,088,688...38,100,010
Ensembl chr 6:32,373,816...32,380,817
G
Hnf1b
HNF1 homeobox B
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857856 (PMID:20040500)
Ensembl RGD
PMID:20040500
GO_REF:0000107
NCBI chr10:69,233,377...69,287,360
Ensembl chr10:68,735,894...68,789,888
G
Gata3
GATA binding protein 3
involved_in
ISO
(PMID:16319112)
RGD
PMID:16319112
NCBI chr17:73,544,234...73,575,670
Ensembl chr17:68,643,873...68,665,391
G
Gdnf
glial cell derived neurotrophic factor
involved_in
IEA ISO
GO_REF:0000107 (PMID:8657307)
Ensembl RGD
PMID:8657307
GO_REF:0000107
NCBI chr 2:58,621,327...58,647,242
Ensembl chr 2:56,895,010...56,917,209
G
Grem1
gremlin 1, DAN family BMP antagonist
involved_in
ISO
(PMID:17522159)
RGD
PMID:17522159
NCBI chr 3:120,966,639...120,978,319
Ensembl chr 3:100,512,313...100,524,082
G
Hs2st1
heparan sulfate 2-O-sulfotransferase 1
acts_upstream_of_or_within
ISO
MGI:1934916 (PMID:9637690)
RGD
PMID:9637690
NCBI chr 2:233,508,018...233,641,769
Ensembl chr 2:233,508,021...233,641,769
G
Nog
noggin
involved_in
IEA ISO
GO_REF:0000107 (PMID:17522159)
Ensembl RGD
PMID:17522159
GO_REF:0000107
NCBI chr10:74,625,874...74,627,501
Ensembl chr10:74,128,712...74,130,339
G
Fmn1
formin 1
acts_upstream_of_or_within
ISO
(PMID:7517224)
RGD
PMID:7517224
NCBI chr 3:120,555,445...120,939,978
Ensembl chr 3:100,134,549...100,479,220
G
Kif26b
kinesin family member 26B
acts_upstream_of_or_within
ISO
MGI:4459557 (PMID:20439720)
RGD
PMID:20439720
NCBI chr13:92,815,427...93,221,071
Ensembl chr13:90,283,404...90,682,811
G
Sall1
spalt-like transcription factor 1
acts_upstream_of_or_within involved_in
ISO
MGI:2388379 (PMID:16839447) (PMID:11688560), (PMID:16839447)
RGD
PMID:11688560 PMID:16839447
NCBI chr19:34,179,316...34,196,278
Ensembl chr19:18,007,503...18,022,705
G
Hes1
hes family bHLH transcription factor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:15821257)
Ensembl RGD
PMID:15821257
GO_REF:0000107
NCBI chr11:84,210,632...84,213,045
Ensembl chr11:70,705,764...70,708,192
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
involved_in
ISO
(PMID:15821257)
RGD
PMID:15821257
NCBI chr 2:95,003,935...95,006,457
Ensembl chr 2:93,095,498...93,100,312
G
Tacstd2
tumor-associated calcium signal transducer 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:22194864)
Ensembl RGD
PMID:22194864
GO_REF:0000107
NCBI chr 4:98,037,620...98,039,320
Ensembl chr 4:96,707,951...96,709,650
G
Wnt11
Wnt family member 11
involved_in
ISO
(PMID:9757009)
RGD
PMID:9757009
NCBI chr 1:162,545,660...162,565,456
Ensembl chr 1:153,138,197...153,154,294
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all