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ONTOLOGY REPORT - ANNOTATIONS

Term:metanephric mesenchyme development
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Accession:GO:0072075 term browser browse the term
Definition:The biological process whose specific outcome is the progression of a metanephric mesenchyme from an initial condition to its mature state. This process begins with the formation of metanephric mesenchyme and ends with the mature structure. Metanephric mesenchyme is the tissue made up of loosely connected mesenchymal cells in the metanephros.

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metanephric mesenchyme development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISO (PMID:20171952) UniProt PMID:20171952 NCBI chrNW_004624738:2,136,228...2,559,092
Ensembl chrNW_004624738:2,136,151...2,138,441 		JBrowse link
G Pax2 paired box 2 involved_in ISO (PMID:20171952) UniProt PMID:20171952 NCBI chrNW_004624831:375,851...453,968
Ensembl chrNW_004624831:375,866...453,930 		JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chrNW_004624774:9,432,765...9,469,690
Ensembl chrNW_004624774:9,432,541...9,469,881 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in ISO (PMID:11891195) UniProt PMID:11891195 NCBI chrNW_004624872:4,539,965...4,592,004
Ensembl chrNW_004624872:4,539,847...4,594,793 		JBrowse link
G Six1 SIX homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:40,453,445...40,457,551
Ensembl chrNW_004624734:40,453,420...40,459,671 		JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (PMID:17300925) UniProt PMID:17300925 NCBI chrNW_004624734:40,397,276...40,409,951
Ensembl chrNW_004624734:40,397,559...40,409,997 		JBrowse link
G Wt1 WT1 transcription factor involved_in ISO (PMID:8395349) UniProt PMID:8395349 NCBI chrNW_004624766:20,899,546...20,937,084
Ensembl chrNW_004624766:20,900,676...20,937,202 		JBrowse link
metanephric cap mesenchymal cell proliferation involved in metanephros development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISO (PMID:18835385) UniProt PMID:18835385 NCBI chrNW_004624738:2,136,228...2,559,092
Ensembl chrNW_004624738:2,136,151...2,138,441 		JBrowse link
metanephric mesenchymal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISO (PMID:16790474) UniProt PMID:16790474 NCBI chrNW_004624738:2,136,228...2,559,092
Ensembl chrNW_004624738:2,136,151...2,138,441 		JBrowse link
G Pax2 paired box 2 involved_in ISO (PMID:16368682) UniProt PMID:16368682 NCBI chrNW_004624831:375,851...453,968
Ensembl chrNW_004624831:375,866...453,930 		JBrowse link
G Tcf21 transcription factor 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624942:890,465...893,679
Ensembl chrNW_004624942:890,365...893,811 		JBrowse link
metanephric mesenchymal cell proliferation involved in metanephros development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 involved_in ISO (PMID:15342483) UniProt PMID:15342483 NCBI chrNW_004624741:23,658,214...23,743,227
Ensembl chrNW_004624741:23,658,004...23,737,742 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in ISO (PMID:12399320) UniProt PMID:12399320 NCBI chrNW_004624800:2,202,986...2,215,309
Ensembl chrNW_004624800:2,203,393...2,212,068 		JBrowse link
metanephric mesenchyme morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 involved_in ISO (PMID:15342483) UniProt PMID:15342483 NCBI chrNW_004624741:23,658,214...23,743,227
Ensembl chrNW_004624741:23,658,004...23,737,742 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO (PMID:16790474) UniProt PMID:16790474 NCBI chrNW_004624738:2,136,228...2,559,092
Ensembl chrNW_004624738:2,136,151...2,138,441 		JBrowse link
G Smad4 SMAD family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624778:14,570,025...14,629,950
Ensembl chrNW_004624778:14,570,348...14,630,325 		JBrowse link
positive regulation of metanephric cap mesenchymal cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISO (PMID:19161241) UniProt PMID:19161241 NCBI chrNW_004624735:27,780,338...27,784,714
Ensembl chrNW_004624735:27,780,037...27,784,806 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17640
    developmental process 6390
      anatomical structure development 5982
        animal organ development 3366
          kidney development 380
            metanephros development 103
              metanephric mesenchyme development 12
                metanephric cap development + 2
                metanephric mesenchymal cell differentiation 3
                metanephric mesenchymal cell proliferation involved in metanephros development 2
                metanephric mesenchyme morphogenesis + 4
Path 2
Term Annotations click to browse term
  biological_process 17640
    developmental process 6390
      anatomical structure development 5982
        multicellular organism development 4819
          system development 4211
            renal system development 394
              kidney development 380
                metanephros development 103
                  metanephric mesenchyme development 12
                    metanephric cap development + 2
                    metanephric mesenchymal cell differentiation 3
                    metanephric mesenchymal cell proliferation involved in metanephros development 2
                    metanephric mesenchyme morphogenesis + 4
paths to the root