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ONTOLOGY REPORT - ANNOTATIONS

Term:metanephric mesenchyme development
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Accession:GO:0072075 term browser browse the term
Definition:The biological process whose specific outcome is the progression of a metanephric mesenchyme from an initial condition to its mature state. This process begins with the formation of metanephric mesenchyme and ends with the mature structure. Metanephric mesenchyme is the tissue made up of loosely connected mesenchymal cells in the metanephros.


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metanephric mesenchyme development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in IDA (PMID:20171952) UniProt PMID:20171952 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
G Pax2 paired box 2 involved_in IDA (PMID:20171952) UniProt PMID:20171952 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,735,057...44,826,310 		JBrowse link
G Pdgfrb platelet derived growth factor receptor, beta polypeptide involved_in ISO PMID:10734101 UniProt PMID:10734101 RGD:8554631 NCBI chr18:61,178,194...61,218,139
Ensembl chr18:61,178,222...61,218,133 		JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:104,599,379...104,653,685
Ensembl chr 5:104,607,316...104,653,685 		JBrowse link
G Six1 sine oculis-related homeobox 1 involved_in IMP (PMID:17300925) UniProt PMID:17300925 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661 		JBrowse link
G Six4 sine oculis-related homeobox 4 involved_in IMP (PMID:17300925) UniProt PMID:17300925 NCBI chr12:73,146,383...73,160,201
Ensembl chr12:73,146,383...73,160,230 		JBrowse link
G Wt1 WT1 transcription factor involved_in IMP (PMID:8395349) UniProt PMID:8395349 NCBI chr 2:104,956,874...105,003,959
Ensembl chr 2:104,956,874...105,003,961 		JBrowse link
metanephric cap mesenchymal cell proliferation involved in metanephros development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in IMP (PMID:18835385) UniProt PMID:18835385 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
metanephric mesenchymal cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in IMP (PMID:16790474) UniProt PMID:16790474 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
G Pax2 paired box 2 involved_in IMP (PMID:16368682) UniProt PMID:16368682 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,735,057...44,826,310 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:52,158,588...52,201,024
Ensembl chr 1:52,158,599...52,201,024 		JBrowse link
G Tcf21 transcription factor 21 involved_in IMP (PMID:12619136) UniProt PMID:12619136 NCBI chr10:22,693,162...22,696,042
Ensembl chr10:22,693,180...22,696,073 		JBrowse link
G Wnt4 wingless-type MMTV integration site family, member 4 involved_in NAS (PMID:16368682) UniProt PMID:16368682 NCBI chr 4:137,004,946...137,026,812
Ensembl chr 4:137,004,800...137,027,037 		JBrowse link
metanephric mesenchymal cell proliferation involved in metanephros development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 involved_in IGI (PMID:15342483) UniProt PMID:15342483 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G Shh sonic hedgehog involved_in IMP (PMID:12399320) UniProt PMID:12399320 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:52,158,588...52,201,024
Ensembl chr 1:52,158,599...52,201,024 		JBrowse link
metanephric mesenchyme morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 involved_in IGI (PMID:15342483) UniProt PMID:15342483 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in IMP (PMID:16790474) UniProt PMID:16790474 NCBI chr12:9,624,442...9,631,500
Ensembl chr12:9,620,116...9,631,500 		JBrowse link
G Smad4 SMAD family member 4 involved_in IMP (PMID:15342483) UniProt PMID:15342483 NCBI chr18:73,767,861...73,836,862
Ensembl chr18:73,772,080...73,836,851 		JBrowse link
positive regulation of metanephric cap mesenchymal cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myc myelocytomatosis oncogene involved_in IMP (PMID:19161241) UniProt PMID:19161241 NCBI chr15:61,857,190...61,862,210
Ensembl chr15:61,857,240...61,862,223 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28636
    developmental process 7494
      anatomical structure development 6964
        animal organ development 3825
          kidney development 410
            metanephros development 108
              metanephric mesenchyme development 14
                metanephric cap development + 2
                metanephric mesenchymal cell differentiation 5
                metanephric mesenchymal cell proliferation involved in metanephros development 3
                metanephric mesenchyme morphogenesis + 4
Path 2
Term Annotations click to browse term
  biological_process 28636
    developmental process 7494
      anatomical structure development 6964
        multicellular organism development 5540
          system development 4764
            renal system development 423
              kidney development 410
                metanephros development 108
                  metanephric mesenchyme development 14
                    metanephric cap development + 2
                    metanephric mesenchymal cell differentiation 5
                    metanephric mesenchymal cell proliferation involved in metanephros development 3
                    metanephric mesenchyme morphogenesis + 4
paths to the root