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ONTOLOGY REPORT - ANNOTATIONS

Term:renal vesicle formation
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Accession:GO:0072033 term browser browse the term
Definition:The developmental process pertaining to the initial formation of the renal vesicle from condensed mesenchymal cells. The renal vesicle is the primordial structure of the nephron epithelium, and is formed by the condensation of mesenchymal cells.
Synonyms:related_synonym: nephron epithelium formation

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renal vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17537789) Ensembl
MGI		 PMID:17537789 GO_REF:0000107 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293 		JBrowse link
G Wnt4 Wnt family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16054034) Ensembl
MGI		 PMID:16054034 GO_REF:0000107 NCBI chrNW_004936474:7,623,462...7,635,416
Ensembl chrNW_004936474:7,623,463...7,635,664 		JBrowse link
mesenchymal to epithelial transition involved in metanephric renal vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smo smoothened, frizzled class receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936579:5,893,064...5,917,021
Ensembl chrNW_004936579:5,892,542...5,917,281 		JBrowse link
renal vesicle induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox8 SRY-box transcription factor 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:128,386...132,648
Ensembl chrNW_004936501:127,703...132,704 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936655:1,849,044...1,852,648
Ensembl chrNW_004936655:1,847,272...1,852,705 		JBrowse link
G Wnt4 Wnt family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11507767) Ensembl
MGI		 PMID:11507767 GO_REF:0000107 NCBI chrNW_004936474:7,623,462...7,635,416
Ensembl chrNW_004936474:7,623,463...7,635,664 		JBrowse link
ureteric bud invasion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmn1 formin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7517224) Ensembl
MGI		 PMID:7517224 GO_REF:0000107 NCBI chrNW_004936673:1,424,513...1,838,277
Ensembl chrNW_004936673:1,432,927...1,719,966 		JBrowse link
G Kif26b kinesin family member 26B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20439720) Ensembl
MGI		 PMID:20439720 GO_REF:0000107 NCBI chrNW_004936526:5,250,154...5,434,699
Ensembl chrNW_004936526:5,255,227...5,434,697 		JBrowse link
G Sall1 spalt like transcription factor 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:2149437|PMID:11688560)
(PMID:16839447)		 UniProt
MGI		 PMID:11688560 PMID:16839447 MGI:2149437 NCBI chrNW_004936475:4,106,663...4,121,356
Ensembl chrNW_004936475:4,106,084...4,121,413 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15871
    developmental process 6321
      anatomical structure formation involved in morphogenesis 1232
        renal vesicle formation 8
          mesenchymal to epithelial transition involved in renal vesicle formation + 1
          mesonephric renal vesicle formation + 0
          metanephric renal vesicle formation + 4
          pre-tubular aggregate formation + 0
          renal vesicle induction + 3
Path 2
Term Annotations click to browse term
  biological_process 15871
    developmental process 6321
      anatomical structure development 5953
        multicellular organism development 4829
          system development 4203
            renal system development 395
              kidney development 382
                nephron development 180
                  nephron morphogenesis 89
                    nephron epithelium morphogenesis 86
                      renal vesicle morphogenesis 17
                        renal vesicle formation 8
                          mesenchymal to epithelial transition involved in renal vesicle formation + 1
                          mesonephric renal vesicle formation + 0
                          metanephric renal vesicle formation + 4
                          pre-tubular aggregate formation + 0
                          renal vesicle induction + 3
paths to the root