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ONTOLOGY REPORT - ANNOTATIONS


Term:nitrogen cycle metabolic process
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Accession:GO:0071941 term browser browse the term
Definition:A nitrogen compound metabolic process that contributes to the nitrogen cycle. The nitrogen cycle is a series of metabolic pathways by which nitrogen is converted between various forms and redox states; it encompasses pathways in which nitrogen is acted upon directly, such as nitrification, denitrification, nitrogen fixation, and mineralization.
Synonyms:xref: Wikipedia:Nitrogen_cycle



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nitrate assimilation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYB5R4 cytochrome b5 reductase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:53,092,006...53,191,216
Ensembl chr 1:53,092,036...53,191,212
JBrowse link
regulation of urea metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR1H4 nuclear receptor subfamily 1 group H member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:83,607,222...83,732,668
Ensembl chr 5:83,604,294...83,684,604
JBrowse link
urea cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARG1 arginase 1 involved_in ISO
IEA
RGD
UniProt
PMID:4062872 GO_REF:0000041 GO_REF:0000043 RGD:2300098 NCBI chr 1:32,006,035...32,028,983
Ensembl chr 1:32,006,046...32,028,988
JBrowse link
G ARG2 arginase 2 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr 7:91,343,987...91,385,911
Ensembl chr 7:91,343,988...91,385,909
JBrowse link
G ASL argininosuccinate lyase involved_in ISO
IEA
RGD
UniProt
PMID:4062872 GO_REF:0000041 GO_REF:0000043 RGD:2300098 NCBI chr 3:16,637,481...16,646,869
Ensembl chr 3:16,637,481...16,646,867
JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in ISO
IBA
IEA
RGD
GO_Central
TreeGrafter
Ensembl
UniProt
PMID:4062872 GO_REF:0000033 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:2300098 NCBI chr 1:270,531,434...270,586,364
Ensembl chr 1:270,531,589...270,586,364
JBrowse link
G CEBPA CCAAT enhancer binding protein alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3712404|PMID:17213233) MGI
Ensembl
PMID:17213233 GO_REF:0000107 MGI:3712404 NCBI chr 6:43,083,200...43,085,884
Ensembl chr 6:43,083,207...43,085,836
JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 ISO RGD PMID:3680220 PMID:4062872 RGD:1582379 RGD:2300098 NCBI chr15:113,210,038...113,339,086
Ensembl chr15:113,150,157...113,339,078
JBrowse link
G FH fumarate hydratase acts_upstream_of ISS UniProt GO_REF:0000024 NCBI chr10:12,404,143...12,431,843
Ensembl chr10:12,404,176...12,431,824
JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (MGI:3712404|PMID:17213233) MGI PMID:17213233 MGI:3712404 NCBI chr 8:1,809,768...1,934,002
Ensembl chr 8:1,809,785...1,934,024
JBrowse link
G OTC ornithine transcarbamylase involved_in ISO
IEA
RGD
Ensembl
UniProt
PMID:3680220 PMID:4062872 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 RGD:1582379 RGD:2300098 NCBI chr  X:34,322,398...34,391,711
Ensembl chr  X:34,322,298...34,391,821
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17808
    metabolic process 10565
      nitrogen compound metabolic process 8468
        nitrogen cycle metabolic process 11
          denitrification pathway 0
          negative regulation of nitrogen cycle metabolic process + 0
          nitrate assimilation + 1
          nitrogen fixation 0
          positive regulation of nitrogen cycle metabolic process + 0
          regulation of nitrogen cycle metabolic process + 1
          urea metabolic process + 10
paths to the root