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ONTOLOGY REPORT - ANNOTATIONS


Term:nitrogen cycle metabolic process
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Accession:GO:0071941 term browser browse the term
Definition:A nitrogen compound metabolic process that contributes to the nitrogen cycle. The nitrogen cycle is a series of metabolic pathways by which nitrogen is converted between various forms and redox states; it encompasses pathways in which nitrogen is acted upon directly, such as nitrification, denitrification, nitrogen fixation, and mineralization.
Synonyms:xref: Wikipedia:Nitrogen_cycle



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nitrate assimilation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYB5R2 cytochrome b5 reductase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr21:31,315,535...31,324,296
Ensembl chr21:31,315,552...31,324,961
JBrowse link
G CYB5R4 cytochrome b5 reductase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:44,170,571...44,247,494
Ensembl chr12:44,141,582...44,247,493
JBrowse link
regulation of urea metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR1H4 nuclear receptor subfamily 1 group H member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:39,497,313...39,608,120
Ensembl chr15:39,536,290...39,608,116
JBrowse link
urea cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARG1 arginase 1 involved_in ISO
IEA
RGD
UniProt
PMID:4062872 GO_REF:0000041 GO_REF:0000043 RGD:2300098 NCBI chr12:242,717...255,736
Ensembl chr12:242,714...255,305
JBrowse link
G ARG2 arginase 2 involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr 8:41,588,051...41,619,406
Ensembl chr 8:41,588,150...41,619,402
JBrowse link
G ASL argininosuccinate lyase involved_in ISO
IEA
RGD
UniProt
PMID:4062872 GO_REF:0000041 GO_REF:0000043 RGD:2300098 NCBI chr 6:768,522...779,144
Ensembl chr 6:730,358...779,424
JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in ISO
IEA
RGD
TreeGrafter
UniProt
Ensembl
PMID:4062872 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:2300098 NCBI chr 9:53,425,228...53,478,007
Ensembl chr 9:53,425,448...53,477,904
JBrowse link
G CEBPA CCAAT enhancer binding protein alpha acts_upstream_of_or_within ISO (MGI:3712404|PMID:17213233) MGI PMID:17213233 MGI:3712404 NCBI chr 1:118,846,252...118,851,045 JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 ISO RGD PMID:3680220 PMID:4062872 RGD:1582379 RGD:2300098 NCBI chr37:18,308,164...18,428,487
Ensembl chr37:18,143,986...18,427,697
JBrowse link
G FH fumarate hydratase acts_upstream_of ISO (MGI:5496931|PMID:23643539) UniProt PMID:23643539 MGI:5496931 NCBI chr 7:32,900,250...32,927,436
Ensembl chr 7:32,901,586...32,927,412
JBrowse link
G GUSB glucuronidase beta involved_in IEA UniProt GO_REF:0000041 GO_REF:0000043 NCBI chr 6:730,345...743,916
Ensembl chr 6:730,358...779,424
JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (MGI:3712404|PMID:17213233) MGI PMID:17213233 MGI:3712404 NCBI chr 3:61,076,934...61,221,462
Ensembl chr 3:61,079,904...61,330,290
JBrowse link
G OTC ornithine transcarbamylase involved_in ISO
IEA
RGD
UniProt
Ensembl
PMID:3680220 PMID:4062872 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 RGD:1582379 RGD:2300098 NCBI chr  X:33,130,921...33,200,441
Ensembl chr  X:33,131,040...33,199,595
JBrowse link
urea metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP2C41 cytochrome P450 2C41 involved_in ISO (PMID:19029318) BHF-UCL PMID:19029318

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17873
    metabolic process 10929
      nitrogen compound metabolic process 8982
        nitrogen cycle metabolic process 14
          denitrification pathway 0
          negative regulation of nitrogen cycle metabolic process + 0
          nitrate assimilation + 2
          nitrogen fixation 0
          positive regulation of nitrogen cycle metabolic process + 0
          regulation of nitrogen cycle metabolic process + 1
          urea metabolic process + 12
paths to the root