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ONTOLOGY REPORT - ANNOTATIONS


Term:nitrogen cycle metabolic process
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Accession:GO:0071941 term browser browse the term
Definition:A nitrogen compound metabolic process that contributes to the nitrogen cycle. The nitrogen cycle is a series of metabolic pathways by which nitrogen is converted between various forms and redox states; it encompasses pathways in which nitrogen is acted upon directly, such as nitrification, denitrification, nitrogen fixation, and mineralization.
Synonyms:xref: Wikipedia:Nitrogen_cycle


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regulation of urea metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1 group H member 4 involved_in ISO (MGI:5306122|PMID:21757002) BHF-UCL PMID:21757002 MGI:5306122 NCBI chrNW_004955405:36,160,360...36,236,258
Ensembl chrNW_004955405:36,160,049...36,237,751
JBrowse link
urea cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 ISO RGD PMID:4062872 RGD:2300098 NCBI chrNW_004955436:12,235,767...12,247,817
Ensembl chrNW_004955436:12,235,767...12,251,972
JBrowse link
G Asl argininosuccinate lyase ISO RGD PMID:4062872 RGD:2300098 NCBI chrNW_004955456:8,409,767...8,419,915
Ensembl chrNW_004955456:8,411,220...8,416,992
JBrowse link
G Ass1 argininosuccinate synthase 1 involved_in ISO (PMID:18473344), (PMID:27287393), (PMID:7977368), (PMID:8792870)
PMID:19491403
RGD
UniProt
PMID:4062872 PMID:7977368 PMID:8792870 PMID:18473344 PMID:19491403 More... RGD:12859071 RGD:2300098 NCBI chrNW_004955513:443,372...485,190
Ensembl chrNW_004955513:445,462...485,190
JBrowse link
G Cebpa CCAAT enhancer binding protein alpha acts_upstream_of_or_within ISO (MGI:3712404|PMID:17213233) MGI PMID:17213233 MGI:3712404 NCBI chrNW_004955468:3,046,544...3,049,217
Ensembl chrNW_004955468:3,047,931...3,049,080
JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 ISO RGD PMID:3680220 PMID:4062872 RGD:1582379 RGD:2300098 NCBI chrNW_004955457:4,848,116...4,961,384
Ensembl chrNW_004955457:4,844,152...4,961,246
JBrowse link
G Fh fumarate hydratase acts_upstream_of ISO (MGI:5496931|PMID:23643539) UniProt PMID:23643539 MGI:5496931 NCBI chrNW_004955406:10,535,801...10,558,649
Ensembl chrNW_004955406:10,535,323...10,561,627
JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO (MGI:3712404|PMID:17213233) MGI PMID:17213233 MGI:3712404 NCBI chrNW_004955514:1,906,189...2,042,357
Ensembl chrNW_004955514:1,906,502...2,038,889
JBrowse link
G Otc ornithine transcarbamylase involved_in ISO (PMID:2556444) RGD
BHF-UCL
PMID:2556444 PMID:3680220 PMID:4062872 RGD:1582379 RGD:2300098 NCBI chrNW_004955601:481,524...543,176
Ensembl chrNW_004955601:481,480...543,176
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12306
    metabolic process 7441
      nitrogen compound metabolic process 6076
        nitrogen cycle metabolic process 9
          denitrification pathway 0
          negative regulation of nitrogen cycle metabolic process + 0
          nitrate assimilation + 0
          nitrogen fixation 0
          positive regulation of nitrogen cycle metabolic process + 0
          regulation of nitrogen cycle metabolic process + 1
          urea metabolic process + 9
paths to the root