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ONTOLOGY REPORT - ANNOTATIONS


Term:DNA biosynthetic process
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Accession:GO:0071897 term browser browse the term
Definition:The cellular DNA metabolic process resulting in the formation of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one.
Synonyms:exact_synonym: DNA anabolism;   DNA biosynthesis;   DNA formation;   DNA synthesis


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DNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccn2 cellular communication network factor 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:21,851,657...21,854,773
Ensembl chr 1:21,851,660...21,854,773
JBrowse link
G Dntt DNA nucleotidylexotransferase IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:260,289,626...260,321,174
Ensembl chr 1:260,289,589...260,321,320
JBrowse link
G Lig1 DNA ligase 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:75,356,212...75,394,757
Ensembl chr 1:75,356,220...75,394,758
JBrowse link
G Lig3 DNA ligase 3 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:70,134,734...70,158,051
Ensembl chr10:70,134,729...70,158,055
JBrowse link
G Lig4 DNA ligase 4 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:85,331,771...85,339,496
Ensembl chr16:85,331,866...85,337,769
JBrowse link
G LOC100911727 DNA ligase 1-like IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:75,224,143...75,264,441
Ensembl chr 1:75,233,703...75,264,293
JBrowse link
G Lox lysyl oxidase ISO MGI:MGI:3610732 (MGI:MGI:5603515|PMID:19458888) RGD PMID:19458888 MGI:MGI:5603515 NCBI chr18:47,500,320...47,577,819
Ensembl chr18:47,500,330...47,577,819
JBrowse link
G Pam16 presequence translocase associated motor 16 ISO (MGI:MGI:4837988|PMID:20719856) RGD PMID:20719856 MGI:MGI:4837988 NCBI chr10:11,146,359...11,153,936
Ensembl chr10:11,146,359...11,153,936
JBrowse link
G Phb prohibitin ISO (MGI:MGI:3814796|PMID:18480465) RGD PMID:18480465 MGI:MGI:3814796 NCBI chr10:83,476,107...83,488,878
Ensembl chr10:83,476,107...83,488,878
JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit IMP
IEA
GO_REF:0000108 GOC PMID:9099618 GO_REF:0000108, RGD:7247275 NCBI chr  X:62,382,604...62,698,830
Ensembl chr  X:62,382,608...62,698,830
JBrowse link
G Pola2 DNA polymerase alpha 2, accessory subunit IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:221,297,417...221,321,601
Ensembl chr 1:221,273,538...221,321,570
JBrowse link
G Polb DNA polymerase beta IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:74,237,001...74,260,272
Ensembl chr16:74,237,001...74,260,271
JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit IMP
ISO
IEA
(MGI:MGI:6383350|PMID:11595739)
GO_REF:0000107
(PMID:11595739)
RGD
Ensembl
PMID:11595739, PMID:11959615 GO_REF:0000107, MGI:MGI:6383350, RGD:7247274 NCBI chr 1:100,538,066...100,554,105
Ensembl chr 1:100,537,900...100,554,488
JBrowse link
G Pold2 DNA polymerase delta 2, accessory subunit ISO (PMID:11595739)
(MGI:MGI:6383350|PMID:11595739)
RGD PMID:11595739 MGI:MGI:6383350 NCBI chr14:86,111,416...86,117,578
Ensembl chr14:86,111,294...86,117,578
JBrowse link
G Pold3 DNA polymerase delta 3, accessory subunit ISO (PMID:11595739)
(MGI:MGI:6383350|PMID:11595739)
RGD PMID:11595739 MGI:MGI:6383350 NCBI chr 1:165,085,142...165,122,385
Ensembl chr 1:165,083,622...165,123,455
JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit IMP RGD PMID:11959615 RGD:7247274 NCBI chr12:52,403,533...52,452,075
Ensembl chr12:52,403,529...52,452,040
JBrowse link
G Polg DNA polymerase gamma, catalytic subunit IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:141,172,117...141,188,893
Ensembl chr 1:141,172,531...141,188,031
JBrowse link
G Polg2 DNA polymerase gamma 2, accessory subunit IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:94,968,836...94,979,259
Ensembl chr10:94,968,836...94,979,259
JBrowse link
G Poll DNA polymerase lambda ISO
ISS
(PMID:19806195)
GO_REF:0000024
RGD
UniProt
PMID:19806195 GO_REF:0000024 NCBI chr 1:265,290,337...265,298,847
Ensembl chr 1:265,290,339...265,298,797
JBrowse link
G Polm DNA polymerase mu IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:86,069,378...86,079,327
Ensembl chr14:86,069,016...86,078,954
JBrowse link
G Polq DNA polymerase theta IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:66,585,860...66,695,369
Ensembl chr11:66,585,881...66,695,353
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 ISO
IEA
(MGI:MGI:5518963|PMID:23651497)
GO_REF:0000107
RGD
Ensembl
PMID:23651497 GO_REF:0000107, MGI:MGI:5518963 NCBI chr19:38,237,963...38,321,572
Ensembl chr19:38,237,965...38,321,528
JBrowse link
G Sphk1 sphingosine kinase 1 ISO (MGI:MGI:5518963|PMID:23651497) RGD PMID:23651497 MGI:MGI:5518963 NCBI chr10:105,498,728...105,504,401
Ensembl chr10:105,498,728...105,504,393
JBrowse link
G Tert telomerase reverse transcriptase ISO (PMID:19701182), (PMID:9398860) RGD PMID:9398860, PMID:19701182 NCBI chr 1:32,250,876...32,275,330
Ensembl chr 1:32,251,714...32,272,476
JBrowse link
G Tk1 thymidine kinase 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:106,817,556...106,828,888
Ensembl chr10:106,817,601...106,828,884
JBrowse link
DNA synthesis involved in DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hrob homologous recombination factor with OB-fold ISO
IEA
ISS
(PMID:31467087)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:31467087 GO_REF:0000024, GO_REF:0000107 NCBI chr10:90,192,608...90,214,486
Ensembl chr10:90,192,627...90,214,486
JBrowse link
G Pola1 DNA polymerase alpha 1, catalytic subunit ISO (PMID:11470886) RGD PMID:11470886 NCBI chr  X:62,382,604...62,698,830
Ensembl chr  X:62,382,608...62,698,830
JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit ISO
ISS
(PMID:1730053), (PMID:24191025), (PMID:3335506)
GO_REF:0000024
RGD
UniProt
PMID:1730053, PMID:3335506, PMID:24191025 GO_REF:0000024 NCBI chr 1:100,538,066...100,554,105
Ensembl chr 1:100,537,900...100,554,488
JBrowse link
G Pold4 DNA polymerase delta 4, accessory subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:219,480,841...219,483,244
Ensembl chr 1:219,481,575...219,483,241
JBrowse link
G Pole DNA polymerase epsilon, catalytic subunit ISO (PMID:1730053) RGD PMID:1730053 NCBI chr12:52,403,533...52,452,075
Ensembl chr12:52,403,529...52,452,040
JBrowse link
G Polh DNA polymerase eta ISO (PMID:17563354) RGD PMID:17563354 NCBI chr 9:17,163,354...17,198,006
Ensembl chr 9:17,163,354...17,197,132
JBrowse link
G Sirt1 sirtuin 1 ISO (MGI:MGI:5297784|PMID:17612497) RGD PMID:17612497 MGI:MGI:5297784 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
G Wrn WRN RecQ like helicase ISO (PMID:17563354) RGD PMID:17563354 NCBI chr16:62,483,773...62,619,018
Ensembl chr16:62,483,761...62,615,375
JBrowse link
G Wrnip1 WRN helicase interacting protein 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:15670210)
Ensembl
UniProt
RGD
PMID:15670210 GO_REF:0000024, GO_REF:0000107 NCBI chr17:32,933,395...32,953,641
Ensembl chr17:32,933,396...32,953,641
JBrowse link
DNA synthesis involved in UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pola1 DNA polymerase alpha 1, catalytic subunit NOT ISS
ISO
GO_REF:0000024
(PMID:1730053)
UniProt
RGD
PMID:1730053 GO_REF:0000024 NCBI chr  X:62,382,604...62,698,830
Ensembl chr  X:62,382,608...62,698,830
JBrowse link
G Pold3 DNA polymerase delta 3, accessory subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:165,085,142...165,122,385
Ensembl chr 1:165,083,622...165,123,455
JBrowse link
G Trex1 three prime repair exonuclease 1 ISO MGI:MGI:3052754 (MGI:MGI:5562498|PMID:23993650) RGD PMID:23993650 MGI:MGI:5562498 NCBI chr 8:117,796,127...117,797,427
Ensembl chr 8:117,796,128...117,797,427
JBrowse link
error-free translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pold1 DNA polymerase delta 1, catalytic subunit ISO
ISS
(PMID:24191025)
GO_REF:0000024
RGD
UniProt
PMID:24191025 GO_REF:0000024 NCBI chr 1:100,538,066...100,554,105
Ensembl chr 1:100,537,900...100,554,488
JBrowse link
G Poldip2 DNA polymerase delta interacting protein 2 ISO
IBA
(PMID:24191025)
PMID:21873635
RGD PMID:24191025, PMID:21873635 RGD:13792537 NCBI chr10:65,781,994...65,790,833
Ensembl chr10:65,780,494...65,790,272
JBrowse link
G Rev1 REV1, DNA directed polymerase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:44,714,137...44,786,330
Ensembl chr 9:44,714,386...44,786,041
JBrowse link
error-prone translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pole2 DNA polymerase epsilon 2, accessory subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:91,494,348...91,532,355
Ensembl chr 6:91,494,393...91,518,996
JBrowse link
G Polh DNA polymerase eta IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:17,163,354...17,198,006
Ensembl chr 9:17,163,354...17,197,132
JBrowse link
G Polk DNA polymerase kappa ISO
IBA
(PMID:28297716)
PMID:21873635
RGD PMID:28297716, PMID:21873635 RGD:13792537 NCBI chr 2:27,305,718...27,364,906
Ensembl chr 2:27,305,728...27,364,906
JBrowse link
G Primpol primase and DNA directed polymerase ISO (PMID:24682820), (PMID:25746449), (PMID:28534480) RGD PMID:24682820, PMID:25746449, PMID:28534480 NCBI chr16:48,863,385...48,900,409
Ensembl chr16:48,863,418...48,897,795
JBrowse link
G Rev1 REV1, DNA directed polymerase ISO
IBA
(MGI:MGI:2157239|PMID:11711549)
PMID:21873635
RGD PMID:11711549, PMID:21873635 MGI:MGI:2157239, RGD:13792537 NCBI chr 9:44,714,137...44,786,330
Ensembl chr 9:44,714,386...44,786,041
JBrowse link
G Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:44,803,664...44,961,362
Ensembl chr20:44,803,666...44,961,382
JBrowse link
meiotic DNA repair synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spata22 spermatogenesis associated 22 ISO MGI:MGI:5314540 (MGI:MGI:5314623|PMID:22011390) RGD PMID:22011390 MGI:MGI:5314623 NCBI chr10:59,893,064...59,910,769
Ensembl chr10:59,879,850...59,911,051
JBrowse link
G Sycp1 synaptonemal complex protein 1 ISO
IBA
IEA
MGI:MGI:109542|MGI:MGI:3580000 (MGI:MGI:5315075|PMID:22164254)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:22164254, PMID:21873635 GO_REF:0000107, MGI:MGI:5315075, RGD:13792537 NCBI chr 2:205,274,766...205,426,869
Ensembl chr 2:205,274,769...205,426,869
JBrowse link
G Sycp3 synaptonemal complex protein 3 ISO MGI:MGI:105931|MGI:MGI:1913904 (MGI:MGI:5315075|PMID:22164254) RGD PMID:22164254 MGI:MGI:5315075 NCBI chr 7:29,029,887...29,044,344
Ensembl chr 7:29,029,263...29,044,251
JBrowse link
G Tex12 testis expressed 12 ISO MGI:MGI:109542|MGI:MGI:3811722 (MGI:MGI:5315075|PMID:22164254) RGD PMID:22164254 MGI:MGI:5315075 NCBI chr 8:54,991,501...54,999,454
Ensembl chr 8:54,992,841...54,994,871
JBrowse link
negative regulation of DNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 ISO (PMID:19366699) RGD PMID:19366699 NCBI chr 7:142,769,942...142,787,336
Ensembl chr 7:142,776,252...142,787,335
JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing ISO
ISS
(PMID:12070119)
GO_REF:0000024
RGD
UniProt
PMID:12070119 GO_REF:0000024 NCBI chr11:81,330,845...81,344,488
Ensembl chr11:81,330,293...81,344,488
JBrowse link
G Ahr aryl hydrocarbon receptor IDA RGD PMID:12193573 RGD:625678 NCBI chr 6:54,963,990...55,001,806
Ensembl chr 6:54,963,990...55,001,464
JBrowse link
G Ankrd1 ankyrin repeat domain 1 ISO (PMID:11139470) RGD PMID:11139470 NCBI chr 1:254,726,985...254,745,673
Ensembl chr 1:254,726,969...254,735,548
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 ISO (PMID:19366699) RGD PMID:19366699 NCBI chr 9:66,568,074...66,683,019
Ensembl chr 9:66,568,074...66,676,494
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A ISO (PMID:11595739) RGD PMID:11595739 NCBI chr20:6,348,422...6,358,864
Ensembl chr20:6,351,458...6,358,864
JBrowse link
G Chek1 checkpoint kinase 1 IMP RGD PMID:12429946 RGD:2316115 NCBI chr 8:39,181,162...39,201,588
Ensembl chr 8:39,181,163...39,243,882
JBrowse link
G Dach1 dachshund family transcription factor 1 ISO (PMID:16980615) RGD PMID:16980615 NCBI chr15:82,095,003...82,482,272
Ensembl chr15:82,099,159...82,482,009
JBrowse link
G Dnajc2 DnaJ heat shock protein family (Hsp40) member C2 ISO
IEA
(MGI:MGI:76992|PMID:7559602)
GO_REF:0000107
RGD
Ensembl
PMID:7559602 GO_REF:0000107, MGI:MGI:76992 NCBI chr 4:9,881,505...9,908,693
Ensembl chr 4:9,882,904...9,908,689
JBrowse link
G Dusp1 dual specificity phosphatase 1 IDA RGD PMID:10446064 RGD:7771571 NCBI chr10:16,970,642...16,973,425
Ensembl chr10:16,970,626...16,973,418
JBrowse link
G Gdf2 growth differentiation factor 2 ISO (PMID:19366699) RGD PMID:19366699 NCBI chr16:10,267,510...10,293,545
Ensembl chr16:10,267,482...10,273,239
JBrowse link
G Gja1 gap junction protein, alpha 1 IDA RGD PMID:14702389 RGD:8662403 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
G Kcnk2 potassium two pore domain channel subfamily K member 2 IMP RGD PMID:23271285 RGD:9831181 NCBI chr13:107,690,111...107,886,476
Ensembl chr13:107,690,087...107,886,476
JBrowse link
G Niban2 niban apoptosis regulator 2 ISO (PMID:14602737), (PMID:17569660), (PMID:20032057) RGD PMID:14602737, PMID:17569660, PMID:20032057 NCBI chr 3:11,921,715...11,971,327
Ensembl chr 3:11,921,715...11,971,327
JBrowse link
G Nppc natriuretic peptide C IDA RGD PMID:12746286 RGD:1580115 NCBI chr 9:93,731,436...93,735,636
Ensembl chr 9:93,731,436...93,735,636
JBrowse link
G Rgn regucalcin IMP RGD PMID:11500948 RGD:9590199 NCBI chr  X:1,833,484...1,848,904
Ensembl chr  X:1,833,492...1,848,904
JBrowse link
G Tp53 tumor protein p53 IMP RGD PMID:11502571 RGD:70312 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
negative regulation of telomerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cers1 ceramide synthase 1 ISO (PMID:17548428) RGD PMID:17548428 NCBI chr16:20,845,580...20,860,789
Ensembl chr16:20,845,576...20,860,789
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit NOT ISO (PMID:18812185) RGD PMID:18812185 NCBI chr10:2,010,140...2,037,953
Ensembl chr10:2,010,648...2,037,891
JBrowse link
G Mcrs1 microspherule protein 1 ISO (PMID:15044100) RGD PMID:15044100 NCBI chr 7:140,910,420...140,919,234
Ensembl chr 7:140,910,423...140,919,234
JBrowse link
G Men1 menin 1 ISO (PMID:12837246) RGD PMID:12837246 NCBI chr 1:221,704,394...221,710,343
Ensembl chr 1:221,704,493...221,710,331
JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase ISO (PMID:16522649) RGD PMID:16522649 NCBI chr 8:71,124,477...71,133,460
Ensembl chr 8:71,125,414...71,132,629
JBrowse link
G Pinx1 PIN2/TERF1 interacting, telomerase inhibitor 1 ISO (PMID:11701125), (PMID:21119197) RGD PMID:11701125, PMID:21119197 NCBI chr15:47,211,682...47,270,343
Ensembl chr15:47,211,583...47,270,317
JBrowse link
G Pml PML nuclear body scaffold ISO (PMID:19567472) RGD PMID:19567472 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226
JBrowse link
G Pot1 protection of telomeres 1 ISO
IBA
(PMID:15632080)
PMID:21873635
RGD PMID:15632080, PMID:21873635 RGD:13792537 NCBI chr 4:51,888,632...51,946,764
Ensembl chr 4:51,888,634...51,946,715
JBrowse link
G Pot1b protection of telomeres 1B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:7,845,697...7,902,270
Ensembl chr 9:7,845,845...7,891,514
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma IMP RGD PMID:16556873 RGD:1580657 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO (PMID:21531765) RGD PMID:21531765 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Ten1 TEN1 subunit of CST complex IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:105,073,077...105,095,094
Ensembl chr10:105,073,077...105,095,094
JBrowse link
G Terf1 telomeric repeat binding factor 1 ISO UniProtKB:O14746 (PMID:11971978) RGD PMID:11971978 NCBI chr 5:2,853,455...2,882,731
Ensembl chr 5:2,853,459...2,882,668
JBrowse link
G Tp53 tumor protein p53 ISO (PMID:10597287) RGD PMID:10597287 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
negative regulation of telomerase RNA reverse transcriptase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp3 poly (ADP-ribose) polymerase family, member 3 ISO (PMID:24528514) RGD PMID:24528514 NCBI chr 8:115,173,440...115,179,543
Ensembl chr 8:115,173,453...115,179,191
JBrowse link
negative regulation of telomere maintenance via telomerase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD, shelterin complex subunit and telomerase recruitment factor ISO
IBA
UniProtKB:Q9NUX5 (PMID:15181449), (PMID:15380063)
PMID:21873635
RGD PMID:15181449, PMID:15380063, PMID:21873635 RGD:13792537 NCBI chr19:37,665,289...37,668,043
Ensembl chr19:37,665,296...37,667,987
JBrowse link
G Ctc1 CST telomere replication complex component 1 ISO (PMID:22763445) RGD PMID:22763445 NCBI chr10:55,596,172...55,616,873
Ensembl chr10:55,596,148...55,616,889
JBrowse link
G Dcp2 decapping mRNA 2 ISO (PMID:26950371) RGD PMID:26950371 NCBI chr18:35,489,274...35,671,676
Ensembl chr18:35,489,274...35,672,291
JBrowse link
G Exosc10 exosome component 10 ISO (PMID:26950371) RGD PMID:26950371 NCBI chr 5:165,374,964...165,398,195
Ensembl chr 5:165,374,951...165,398,217
JBrowse link
G Gnl3l G protein nucleolar 3 like ISO (PMID:18082603) RGD PMID:18082603 NCBI chr  X:20,037,558...20,070,505
Ensembl chr  X:20,034,882...20,070,578
JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 ISO
IEA
(PMID:23935072)
GO_REF:0000107
RGD
Ensembl
PMID:23935072 GO_REF:0000107 NCBI chr 7:144,865,302...144,871,592
Ensembl chr 7:144,865,608...144,871,585
JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C ISO (PMID:18082603) RGD PMID:18082603 NCBI chr15:28,486,605...28,517,353
Ensembl chr15:28,486,617...28,517,353
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U ISO
IBA
IEA
(PMID:18082603)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:18082603, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572
JBrowse link
G Nat10 N-acetyltransferase 10 ISO (PMID:18082603) RGD PMID:18082603 NCBI chr 3:93,658,119...93,698,136
Ensembl chr 3:93,658,117...93,698,136
JBrowse link
G Pif1 PIF1 5'-to-3' DNA helicase ISO (PMID:23657261) RGD PMID:23657261 NCBI chr 8:71,124,477...71,133,460
Ensembl chr 8:71,125,414...71,132,629
JBrowse link
G Pinx1 PIN2/TERF1 interacting, telomerase inhibitor 1 ISO (PMID:11701125), (PMID:21119197) RGD PMID:11701125, PMID:21119197 NCBI chr15:47,211,682...47,270,343
Ensembl chr15:47,211,583...47,270,317
JBrowse link
G Pml PML nuclear body scaffold ISO (PMID:19567472) RGD PMID:19567472 NCBI chr 8:63,002,515...63,034,310
Ensembl chr 8:63,004,870...63,034,226
JBrowse link
G Pot1 protection of telomeres 1 ISO UniProtKB:Q96AP0 (PMID:15181449) RGD PMID:15181449 NCBI chr 4:51,888,632...51,946,764
Ensembl chr 4:51,888,634...51,946,715
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO (PMID:21531765) RGD PMID:21531765 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Stn1 STN1 subunit of CST complex IEA
ISO
GO_REF:0000107
(PMID:22763445)
Ensembl
RGD
PMID:22763445 GO_REF:0000107 NCBI chr 1:267,281,786...267,315,714
Ensembl chr 1:267,281,764...267,315,729
JBrowse link
G Ten1 TEN1 subunit of CST complex ISO
IBA
(PMID:22763445)
PMID:21873635
RGD PMID:22763445, PMID:21873635 RGD:13792537 NCBI chr10:105,073,077...105,095,094
Ensembl chr10:105,073,077...105,095,094
JBrowse link
G Tent4b terminal nucleotidyltransferase 4B ISO (PMID:26950371) RGD PMID:26950371 NCBI chr19:19,771,289...19,834,759
Ensembl chr19:19,771,677...19,832,812
JBrowse link
G Terf1 telomeric repeat binding factor 1 ISO UniProtKB:O14746 (PMID:11971978) RGD PMID:11971978 NCBI chr 5:2,853,455...2,882,731
Ensembl chr 5:2,853,459...2,882,668
JBrowse link
G Terf2 telomeric repeat binding factor 2 ISO (PMID:11971978), (PMID:17055345) RGD PMID:11971978, PMID:17055345 NCBI chr19:39,271,992...39,301,506
Ensembl chr19:39,272,499...39,300,893
JBrowse link
G Tinf2 TERF1 interacting nuclear factor 2 ISO (PMID:10581025), (PMID:15133513) RGD PMID:10581025, PMID:15133513 NCBI chr15:34,358,697...34,365,085
Ensembl chr15:34,360,974...34,364,081
JBrowse link
positive regulation of DNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb2 arrestin, beta 2 IMP RGD PMID:19254952 RGD:5509898 NCBI chr10:57,040,252...57,048,045
Ensembl chr10:57,040,267...57,048,134
JBrowse link
G C3ar1 complement C3a receptor 1 IMP RGD PMID:23713944 RGD:7411623 NCBI chr 4:155,681,767...155,691,240
Ensembl chr 4:155,684,029...155,690,869
JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta IMP RGD PMID:17267544 RGD:2303063 NCBI chr 2:230,900,907...231,132,207
Ensembl chr 2:230,901,126...231,132,039
JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 IMP RGD PMID:16005543 RGD:5131269 NCBI chr 4:85,286,371...85,329,374
Ensembl chr 4:85,286,372...85,329,362
JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 IMP RGD PMID:20439821 RGD:7829726 NCBI chr 6:2,308,179...2,316,739
Ensembl chr 6:2,307,808...2,316,722
JBrowse link
G Ddx39b DExD-box helicase 39B IMP RGD PMID:22446327 RGD:10401140 NCBI chr20:4,806,103...4,818,600
Ensembl chr20:4,806,108...4,818,568
JBrowse link
G Egf epidermal growth factor IDA RGD PMID:3093142 RGD:10395243 NCBI chr 2:68,820,616...68,895,537 JBrowse link
G Fgf2 fibroblast growth factor 2 ISO UniProtKB:Q9H3U7 (PMID:16774925) RGD PMID:16774925 NCBI chr 2:124,081,072...124,134,133
Ensembl chr 2:124,081,072...124,134,681
JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 ISO
ISS
(PMID:21653700)
GO_REF:0000024
RGD
UniProt
PMID:21653700 GO_REF:0000024 NCBI chr17:9,990,072...10,004,339
Ensembl chr17:9,990,078...10,004,321
JBrowse link
G Gfer growth factor, augmenter of liver regeneration IDA RGD PMID:16937468 RGD:9685728 NCBI chr10:14,059,347...14,061,703
Ensembl chr10:14,059,347...14,061,703
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IMP RGD PMID:12721208 RGD:10045365 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
G Hgf hepatocyte growth factor ISO (PMID:2531289) RGD PMID:2531289 NCBI chr 4:15,435,460...15,505,377
Ensembl chr 4:15,433,295...15,505,362
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO
ISS
(PMID:9924025)
GO_REF:0000024
RGD
UniProt
PMID:9924025 GO_REF:0000024 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Nox4 NADPH oxidase 4 ISO (MGI:MGI:5009390|PMID:17942966) RGD PMID:17942966 MGI:MGI:5009390 NCBI chr 1:150,796,359...150,976,186
Ensembl chr 1:150,797,084...150,976,194
JBrowse link
G Pak3 p21 (RAC1) activated kinase 3 IMP RGD PMID:12890786 RGD:7775030 NCBI chr  X:114,784,452...115,042,683
Ensembl chr  X:114,929,029...115,036,669
JBrowse link
G Pdgfb platelet derived growth factor subunit B IEA
ISO
ISS
GO_REF:0000107
(PMID:10644978), (PMID:10734101), (PMID:11788434), (PMID:12070119), (PMID:16530387), (PMID:17942966), (PMID:19019919)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:10644978, PMID:10734101, PMID:11788434, PMID:12070119, PMID:16530387, PMID:17942966, PMID:19019919 GO_REF:0000024, GO_REF:0000107 NCBI chr 7:121,215,458...121,233,092
Ensembl chr 7:121,214,628...121,232,741
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta ISO
ISS
(MGI:MGI:5284758|PMID:19019919)
GO_REF:0000024
RGD
UniProt
PMID:19019919 GO_REF:0000024, MGI:MGI:5284758 NCBI chr18:56,364,586...56,406,381
Ensembl chr18:56,364,620...56,406,381
JBrowse link
G Prkd2 protein kinase D2 ISO
ISS
(MGI:MGI:5306299|PMID:17226786)
GO_REF:0000024
RGD
UniProt
PMID:17226786 GO_REF:0000024, MGI:MGI:5306299 NCBI chr 1:78,767,911...78,796,223
Ensembl chr 1:78,767,911...78,796,231
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta IMP RGD PMID:21451101 RGD:10041071 NCBI chr15:42,827,306...42,947,796
Ensembl chr15:42,827,310...42,947,656
JBrowse link
G Rgcc regulator of cell cycle IDA PMID:9756947 BHF-UCL PMID:9756947 RGD:633887 NCBI chr15:61,551,861...61,564,695
Ensembl chr15:61,551,861...61,564,695
JBrowse link
G Smoc2 SPARC related modular calcium binding 2 ISO UniProtKB:P09038|UniProtKB:P15692-4 (PMID:16774925) RGD PMID:16774925 NCBI chr 1:56,242,289...56,374,106
Ensembl chr 1:56,242,346...56,374,120
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase IMP PMID:16530387 UniProt PMID:16530387 RGD:8553998 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Tnf tumor necrosis factor IDA RGD PMID:9395232 RGD:14696805 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Vegfa vascular endothelial growth factor A ISO UniProtKB:Q9H3U7 (PMID:16774925) RGD PMID:16774925 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
positive regulation of DNA-directed DNA polymerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chtf18 chromosome transmission fidelity factor 18 ISO (PMID:12930902) RGD PMID:12930902 NCBI chr10:15,090,762...15,098,825
Ensembl chr10:15,090,316...15,098,791
JBrowse link
G Chtf8 chromosome transmission fidelity factor 8 ISO
ISS
(PMID:12930902)
GO_REF:0000024
RGD
UniProt
PMID:12930902 GO_REF:0000024 NCBI chr19:39,077,580...39,087,880
Ensembl chr19:39,077,580...39,087,880
JBrowse link
G Dscc1 DNA replication and sister chromatid cohesion 1 ISO (PMID:12930902) RGD PMID:12930902 NCBI chr 7:94,759,076...94,774,787
Ensembl chr 7:94,758,800...94,774,569
JBrowse link
G Npm1 nucleophosmin 1 IDA RGD PMID:8123045 RGD:11535022 NCBI chr10:18,080,949...18,091,062
Ensembl chr10:18,080,950...18,090,950
JBrowse link
G Pcna proliferating cell nuclear antigen ISO (PMID:11595739) RGD PMID:11595739 NCBI chr 3:124,880,698...124,884,570
Ensembl chr 3:124,880,698...124,884,570
JBrowse link
G Polg2 DNA polymerase gamma 2, accessory subunit ISO (PMID:10608893), (PMID:19837034), (PMID:19858216), (PMID:26123486) RGD PMID:10608893, PMID:19837034, PMID:19858216, PMID:26123486 NCBI chr10:94,968,836...94,979,259
Ensembl chr10:94,968,836...94,979,259
JBrowse link
G Rfc2 replication factor C subunit 2 ISO
ISS
(PMID:12930902)
GO_REF:0000024
RGD
UniProt
PMID:12930902 GO_REF:0000024 NCBI chr12:25,130,375...25,143,480
Ensembl chr12:25,130,377...25,143,480
JBrowse link
G Rfc3 replication factor C subunit 3 ISO (PMID:12930902) RGD PMID:12930902 NCBI chr12:1,460,581...1,471,344
Ensembl chr12:1,460,538...1,471,357
JBrowse link
G Rfc4 replication factor C subunit 4 ISO (PMID:12930902) RGD PMID:12930902 NCBI chr11:81,358,592...81,373,044
Ensembl chr11:81,358,592...81,373,043
JBrowse link
G Rfc5 replication factor C subunit 5 ISO (PMID:12930902) RGD PMID:12930902 NCBI chr12:44,931,494...44,941,051
Ensembl chr12:44,931,494...44,941,324
JBrowse link
positive regulation of telomerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD, shelterin complex subunit and telomerase recruitment factor ISO
IBA
(PMID:17237768)
PMID:21873635
RGD PMID:17237768, PMID:21873635 RGD:13792537 NCBI chr19:37,665,289...37,668,043
Ensembl chr19:37,665,296...37,667,987
JBrowse link
G Aurkb aurora kinase B ISO (PMID:21531765) RGD PMID:21531765 NCBI chr10:55,625,860...55,632,399
Ensembl chr10:55,626,741...55,634,991
JBrowse link
G Cct2 chaperonin containing TCP1 subunit 2 ISO (PMID:25467444) RGD PMID:25467444 NCBI chr 7:60,106,532...60,122,779
Ensembl chr 7:60,109,974...60,122,805
JBrowse link
G Cct4 chaperonin containing TCP1 subunit 4 ISO (PMID:25467444) RGD PMID:25467444 NCBI chr14:107,767,392...107,780,270
Ensembl chr14:107,767,392...107,780,270
JBrowse link
G Ctnnb1 catenin beta 1 ISO
IEA
(MGI:MGI:5428344|PMID:22723415)
GO_REF:0000107
RGD
Ensembl
PMID:22723415 GO_REF:0000107, MGI:MGI:5428344 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 ISO MGI:MGI:3849598 (MGI:MGI:3047190|PMID:15240872)
(PMID:25467444)
RGD PMID:15240872, PMID:25467444 MGI:MGI:3047190 NCBI chr  X:155,844,914...155,862,363
Ensembl chr  X:155,844,857...155,862,475
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist ISO (PMID:16545136) RGD PMID:16545136 NCBI chr 3:105,203,309...105,214,989
Ensembl chr 3:105,203,309...105,214,989
JBrowse link
G Grhl2 grainyhead-like transcription factor 2 ISO (PMID:19015635), (PMID:20938050) RGD PMID:19015635, PMID:20938050 NCBI chr 7:76,058,623...76,197,360
Ensembl chr 7:76,059,386...76,197,856
JBrowse link
G Hmbox1 homeobox containing 1 ISO
IBA
(PMID:23685356)
PMID:21873635
RGD PMID:23685356, PMID:21873635 RGD:13792537 NCBI chr15:48,194,709...48,326,310
Ensembl chr15:48,199,995...48,284,548
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 ISO (PMID:10197982) RGD PMID:10197982 NCBI chr 6:135,107,262...135,112,793
Ensembl chr 6:135,107,271...135,112,775
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO (PMID:10197982) RGD PMID:10197982 NCBI chr 9:17,817,791...17,823,163
Ensembl chr 9:17,817,721...17,823,243
JBrowse link
G Klf4 Kruppel like factor 4 ISO (PMID:20629177) RGD PMID:20629177 NCBI chr 5:72,283,311...72,287,669
Ensembl chr 5:72,283,313...72,287,669
JBrowse link
G Map2k7 mitogen activated protein kinase kinase 7 ISO
IEA
(PMID:21531765)
GO_REF:0000107
RGD
Ensembl
PMID:21531765 GO_REF:0000107 NCBI chr12:2,546,278...2,555,310
Ensembl chr12:2,548,218...2,555,164
JBrowse link
G Map3k4 mitogen activated protein kinase kinase kinase 4 ISO (PMID:21531765) RGD PMID:21531765 NCBI chr 1:48,625,714...48,711,642
Ensembl chr 1:48,625,743...48,711,642
JBrowse link
G Mapk1 mitogen activated protein kinase 1 ISO (PMID:21531765) RGD PMID:21531765 NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254
JBrowse link
G Mapk15 mitogen-activated protein kinase 15 ISO
IEA
(PMID:21531765)
GO_REF:0000107
RGD
Ensembl
PMID:21531765 GO_REF:0000107 NCBI chr 7:117,041,287...117,061,799
Ensembl chr 7:117,055,395...117,061,047
JBrowse link
G Mapk3 mitogen activated protein kinase 3 ISO (PMID:21531765) RGD PMID:21531765 NCBI chr 1:198,192,773...198,198,975
Ensembl chr 1:198,192,773...198,198,975
JBrowse link
G Mapkapk5 MAPK activated protein kinase 5 ISO (PMID:21531765) RGD PMID:21531765 NCBI chr12:40,510,378...40,529,332
Ensembl chr12:40,510,378...40,529,338
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO (MGI:MGI:5810267|PMID:9637678) RGD PMID:9637678 MGI:MGI:5810267 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Naf1 nuclear assembly factor 1 ribonucleoprotein ISO
IEA
(PMID:27510903)
GO_REF:0000107
RGD
Ensembl
PMID:27510903 GO_REF:0000107 NCBI chr16:24,582,000...24,612,773
Ensembl chr16:24,578,678...24,612,732
JBrowse link
G Nek2 NIMA-related kinase 2 ISO (PMID:21531765) RGD PMID:21531765 NCBI chr13:110,511,546...110,524,750
Ensembl chr13:110,511,668...110,522,769
JBrowse link
G Nek7 NIMA-related kinase 7 ISO
IEA
(PMID:21531765)
GO_REF:0000107
RGD
Ensembl
PMID:21531765 GO_REF:0000107 NCBI chr13:55,485,759...55,617,534
Ensembl chr13:55,488,531...55,561,750
JBrowse link
G Nvl nuclear VCP-like ISO
IBA
(PMID:22226966)
PMID:21873635
RGD PMID:22226966, PMID:21873635 RGD:13792537 NCBI chr13:99,410,026...99,468,783
Ensembl chr13:99,410,026...99,468,778
JBrowse link
G Parm1 prostate androgen-regulated mucin-like protein 1 IMP
IBA
PMID:12772192
PMID:21873635
UniProt
GO_Central
PMID:12772192, PMID:21873635 RGD:8553456, RGD:13792537 NCBI chr14:17,972,914...18,076,870
Ensembl chr14:17,969,219...18,076,907
JBrowse link
G Parn poly(A)-specific ribonuclease ISO (PMID:26482878) RGD PMID:26482878 NCBI chr10:1,309,724...1,461,123
Ensembl chr10:1,308,414...1,461,269
JBrowse link
G Pkib cAMP-dependent protein kinase inhibitor beta ISO
IEA
(PMID:21531765)
GO_REF:0000107
RGD
Ensembl
PMID:21531765 GO_REF:0000107 NCBI chr20:40,616,868...40,712,598
Ensembl chr20:40,618,128...40,712,592
JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase ISO (PMID:21531765) RGD PMID:21531765 NCBI chr 1:100,853,475...100,859,202
Ensembl chr 1:100,853,902...100,859,084
JBrowse link
G Pot1 protection of telomeres 1 ISO (PMID:15181449), (PMID:16043710), (PMID:17237768) RGD PMID:15181449, PMID:16043710, PMID:17237768 NCBI chr 4:51,888,632...51,946,764
Ensembl chr 4:51,888,634...51,946,715
JBrowse link
G Prkcq protein kinase C, theta ISO
IEA
(PMID:21531765)
GO_REF:0000107
RGD
Ensembl
PMID:21531765 GO_REF:0000107 NCBI chr17:70,971,915...71,105,286
Ensembl chr17:70,971,915...71,105,286
JBrowse link
G Ptges3 prostaglandin E synthase 3 ISO (MGI:MGI:5819359|PMID:10197982)
(PMID:10197982), (PMID:19740745)
RGD PMID:10197982, PMID:19740745 MGI:MGI:5819359 NCBI chr 7:2,479,267...2,497,024
Ensembl chr 7:2,479,311...2,497,013
JBrowse link
G Tcp1 t-complex 1 ISO (PMID:25467444) RGD PMID:25467444 NCBI chr 1:48,025,664...48,033,343
Ensembl chr 1:48,025,663...48,033,396
JBrowse link
G Tnks tankyrase ISO (PMID:12782650) RGD PMID:12782650 NCBI chr16:60,925,093...61,067,192
Ensembl chr16:60,925,093...61,067,192
JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 ISS
ISO
GO_REF:0000024
(MGI:MGI:6189679|PMID:29804836)
(PMID:19179534), (PMID:23685356), (PMID:25467444), (PMID:29804836)
UniProt
RGD
PMID:19179534, PMID:23685356, PMID:25467444, PMID:29804836 GO_REF:0000024, MGI:MGI:6189679 NCBI chr10:56,169,024...56,185,800
Ensembl chr10:56,169,025...56,185,857
JBrowse link
positive regulation of telomerase RNA reverse transcriptase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 IDA PMID:23184978 BHF-UCL PMID:23184978 RGD:11567256 NCBI chr 4:81,237,496...81,241,281
Ensembl chr 4:81,237,496...81,241,282
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO (MGI:MGI:5438900|PMID:22633954) RGD PMID:22633954 MGI:MGI:5438900 NCBI chr14:11,256,163...11,274,684
Ensembl chr14:11,256,268...11,274,578
JBrowse link
positive regulation of telomere maintenance via telomerase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD, shelterin complex subunit and telomerase recruitment factor ISO (PMID:17237768) RGD PMID:17237768 NCBI chr19:37,665,289...37,668,043
Ensembl chr19:37,665,296...37,667,987
JBrowse link
G Atm ATM serine/threonine kinase ISO (MGI:MGI:5705431|PMID:26586427) RGD PMID:26586427 MGI:MGI:5705431 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045
JBrowse link
G Atr ATR serine/threonine kinase ISO (MGI:MGI:5705431|PMID:26586427) RGD PMID:26586427 MGI:MGI:5705431 NCBI chr 8:103,673,578...103,770,886
Ensembl chr 8:103,673,411...103,770,947
JBrowse link
G Aurkb aurora kinase B ISO (PMID:21531765) RGD PMID:21531765 NCBI chr10:55,625,860...55,632,399
Ensembl chr10:55,626,741...55,634,991
JBrowse link
G Cct2 chaperonin containing TCP1 subunit 2 ISO (PMID:25467444) RGD PMID:25467444 NCBI chr 7:60,106,532...60,122,779
Ensembl chr 7:60,109,974...60,122,805
JBrowse link
G Cct3 chaperonin containing TCP1 subunit 3 ISO (PMID:25467444) RGD PMID:25467444 NCBI chr 2:187,669,051...187,693,610
Ensembl chr 2:187,668,796...187,693,610
JBrowse link
G Cct4 chaperonin containing TCP1 subunit 4 ISO (PMID:25467444) RGD PMID:25467444 NCBI chr14:107,767,392...107,780,270
Ensembl chr14:107,767,392...107,780,270
JBrowse link
G Cct5 chaperonin containing TCP1 subunit 5 ISO (PMID:25467444) RGD PMID:25467444 NCBI chr 2:84,667,578...84,678,730
Ensembl chr 2:84,667,633...84,678,790
JBrowse link
G Cct6a chaperonin containing TCP1 subunit 6A ISO (PMID:25467444) RGD PMID:25467444 NCBI chr12:30,491,584...30,501,813
Ensembl chr12:30,491,416...30,501,860
JBrowse link
G Cct7 chaperonin containing TCP1 subunit 7 ISO (PMID:25467444) RGD PMID:25467444 NCBI chr 4:117,235,023...117,252,265
Ensembl chr 4:117,235,023...117,252,265
JBrowse link
G Cct8 chaperonin containing TCP1 subunit 8 ISO (PMID:25467444) RGD PMID:25467444 NCBI chr11:27,130,172...27,141,881
Ensembl chr11:27,130,172...27,141,881
JBrowse link
G Ctnnb1 catenin beta 1 ISO
IEA
(MGI:MGI:5428344|PMID:22723415)
GO_REF:0000107
RGD
Ensembl
PMID:22723415 GO_REF:0000107, MGI:MGI:5428344 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 ISO MGI:MGI:3849598 (MGI:MGI:3047190|PMID:15240872) RGD PMID:15240872 MGI:MGI:3047190 NCBI chr  X:155,844,914...155,862,363
Ensembl chr  X:155,844,857...155,862,475
JBrowse link
G Fbxo4 F-box protein 4 ISO (PMID:16275645) RGD PMID:16275645 NCBI chr 2:53,797,954...53,811,134
Ensembl chr 2:53,797,954...53,811,134
JBrowse link
G Hmbox1 homeobox containing 1 ISO
IBA
(PMID:23685356)
PMID:21873635
RGD PMID:23685356, PMID:21873635 RGD:13792537 NCBI chr15:48,194,709...48,326,310
Ensembl chr15:48,199,995...48,284,548
JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 ISO
IEA
(PMID:23935072)
GO_REF:0000107
RGD
Ensembl
PMID:23935072 GO_REF:0000107 NCBI chr 7:144,865,302...144,871,592
Ensembl chr 7:144,865,608...144,871,585
JBrowse link
G Map2k7 mitogen activated protein kinase kinase 7 ISO
IEA
(PMID:21531765)
GO_REF:0000107
RGD
Ensembl
PMID:21531765 GO_REF:0000107 NCBI chr12:2,546,278...2,555,310
Ensembl chr12:2,548,218...2,555,164
JBrowse link
G Map3k4 mitogen activated protein kinase kinase kinase 4 ISO (PMID:21531765) RGD PMID:21531765 NCBI chr 1:48,625,714...48,711,642
Ensembl chr 1:48,625,743...48,711,642
JBrowse link
G Mapk1 mitogen activated protein kinase 1 ISO (PMID:21531765) RGD PMID:21531765 NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254
JBrowse link
G Mapk15 mitogen-activated protein kinase 15 ISO
IEA
(PMID:21531765)
GO_REF:0000107
RGD
Ensembl
PMID:21531765 GO_REF:0000107 NCBI chr 7:117,041,287...117,061,799
Ensembl chr 7:117,055,395...117,061,047
JBrowse link
G Mapk3 mitogen activated protein kinase 3 ISO (PMID:21531765) RGD PMID:21531765 NCBI chr 1:198,192,773...198,198,975
Ensembl chr 1:198,192,773...198,198,975
JBrowse link
G Mapkapk5 MAPK activated protein kinase 5 ISO (PMID:21531765) RGD PMID:21531765 NCBI chr12:40,510,378...40,529,332
Ensembl chr12:40,510,378...40,529,338
JBrowse link
G Nek2 NIMA-related kinase 2 ISO (PMID:21531765) RGD PMID:21531765 NCBI chr13:110,511,546...110,524,750
Ensembl chr13:110,511,668...110,522,769
JBrowse link
G Nek7 NIMA-related kinase 7 ISO
IEA
(PMID:21531765)
GO_REF:0000107
RGD
Ensembl
PMID:21531765 GO_REF:0000107 NCBI chr13:55,485,759...55,617,534
Ensembl chr13:55,488,531...55,561,750
JBrowse link
G Parn poly(A)-specific ribonuclease ISO (PMID:26482878), (PMID:26950371) RGD PMID:26482878, PMID:26950371 NCBI chr10:1,309,724...1,461,123
Ensembl chr10:1,308,414...1,461,269
JBrowse link
G Pkib cAMP-dependent protein kinase inhibitor beta ISO
IEA
(PMID:21531765)
GO_REF:0000107
RGD
Ensembl
PMID:21531765 GO_REF:0000107 NCBI chr20:40,616,868...40,712,598
Ensembl chr20:40,618,128...40,712,592
JBrowse link
G Pnkp polynucleotide kinase 3'-phosphatase ISO (PMID:21531765) RGD PMID:21531765 NCBI chr 1:100,853,475...100,859,202
Ensembl chr 1:100,853,902...100,859,084
JBrowse link
G Pot1 protection of telomeres 1 ISO (PMID:12768206), (PMID:12781132), (PMID:17237768) RGD PMID:12768206, PMID:12781132, PMID:17237768 NCBI chr 4:51,888,632...51,946,764
Ensembl chr 4:51,888,634...51,946,715
JBrowse link
G Prkcq protein kinase C, theta ISO
IEA
(PMID:21531765)
GO_REF:0000107
RGD
Ensembl
PMID:21531765 GO_REF:0000107 NCBI chr17:70,971,915...71,105,286
Ensembl chr17:70,971,915...71,105,286
JBrowse link
G Tcp1 t-complex 1 ISO (PMID:25467444) RGD PMID:25467444 NCBI chr 1:48,025,664...48,033,343
Ensembl chr 1:48,025,663...48,033,396
JBrowse link
G Terc telomerase RNA component ISO MGI:MGI:1857930 (MGI:MGI:3774867|PMID:17982445) RGD PMID:17982445 MGI:MGI:3774867 NCBI chr 2:116,432,723...116,433,110
Ensembl chr 2:116,432,691...116,433,110
JBrowse link
G Tnks tankyrase ISO (PMID:11739745), (PMID:12782650), (PMID:18221737) RGD PMID:11739745, PMID:12782650, PMID:18221737 NCBI chr16:60,925,093...61,067,192
Ensembl chr16:60,925,093...61,067,192
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 ISO (PMID:19188702) RGD PMID:19188702 NCBI chr 9:79,659,275...79,748,050
Ensembl chr 9:79,659,251...79,748,078
JBrowse link
regulation of DNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn1a cyclin-dependent kinase inhibitor 1A ISO MGI:MGI:1933751 (MGI:MGI:3617096|PMID:11981756) RGD PMID:11981756 MGI:MGI:3617096 NCBI chr20:6,348,422...6,358,864
Ensembl chr20:6,351,458...6,358,864
JBrowse link
G Pdgfa platelet derived growth factor subunit A NOT ISS
ISO
GO_REF:0000024
(PMID:11788434), (PMID:19019919)
UniProt
RGD
PMID:11788434, PMID:19019919 GO_REF:0000024 NCBI chr12:17,734,141...17,756,186
Ensembl chr12:17,734,133...17,755,285
JBrowse link
G Sh2b1 SH2B adaptor protein 1 ISO (MGI:MGI:5009204|PMID:10644978) RGD PMID:10644978 MGI:MGI:5009204 NCBI chr 1:197,878,839...197,888,223
Ensembl chr 1:197,878,840...197,886,759
JBrowse link
G Tfdp1 transcription factor Dp-1 ISO (MGI:MGI:3525422|PMID:15448153) RGD PMID:15448153 MGI:MGI:3525422 NCBI chr16:81,088,642...81,127,244
Ensembl chr16:81,089,292...81,127,257
JBrowse link
G Tom1l1 target of myb1 like 1 membrane trafficking protein NOT ISO (PMID:16479011) RGD PMID:16479011 NCBI chr10:78,173,847...78,219,805
Ensembl chr10:78,173,847...78,219,793
JBrowse link
regulation of telomerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase NOT ISO (PMID:26586427) RGD PMID:26586427 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045
JBrowse link
G Hmbox1 homeobox containing 1 ISO (PMID:23685356) RGD PMID:23685356 NCBI chr15:48,194,709...48,326,310
Ensembl chr15:48,199,995...48,284,548
JBrowse link
G Nabp2 nucleic acid binding protein 2 NOT ISO (PMID:25589350) RGD PMID:25589350 NCBI chr 7:2,820,006...2,825,627
Ensembl chr 7:2,820,007...2,825,608
JBrowse link
G Parp4 poly (ADP-ribose) polymerase family, member 4 ISO (PMID:15169895) RGD PMID:15169895 NCBI chr15:36,809,362...36,911,167 JBrowse link
regulation of telomere maintenance via telomerase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase ISO UniProtKB:Q9NUX5 (PMID:26586433) RGD PMID:26586433 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045
JBrowse link
G Pot1 protection of telomeres 1 ISO
IBA
UniProtKB:Q13315 (PMID:26586433)
PMID:21873635
RGD PMID:26586433, PMID:21873635 RGD:13792537 NCBI chr 4:51,888,632...51,946,764
Ensembl chr 4:51,888,634...51,946,715
JBrowse link
G Pot1b protection of telomeres 1B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:7,845,697...7,902,270
Ensembl chr 9:7,845,845...7,891,514
JBrowse link
G Terf2 telomeric repeat binding factor 2 ISO
IBA
(PMID:19864690), (PMID:23685356)
PMID:21873635
RGD PMID:19864690, PMID:23685356, PMID:21873635 RGD:13792537 NCBI chr19:39,271,992...39,301,506
Ensembl chr19:39,272,499...39,300,893
JBrowse link
RNA-dependent DNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tep1 telomerase associated protein 1 IC
IEA
PMID:9118230
GO_REF:0000108
GOC PMID:9118230 GO_REF:0000108, RGD:1299082 NCBI chr15:27,751,186...27,798,839
Ensembl chr15:27,751,180...27,798,839
JBrowse link
G Terf2 telomeric repeat binding factor 2 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:39,271,992...39,301,506
Ensembl chr19:39,272,499...39,300,893
JBrowse link
G Tert telomerase reverse transcriptase ISO (PMID:9398860) RGD PMID:9398860 NCBI chr 1:32,250,876...32,275,330
Ensembl chr 1:32,251,714...32,272,476
JBrowse link
telomere maintenance via telomerase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkc1 dyskerin pseudouridine synthase 1 ISS
ISO
GO_REF:0000024
GO:0090669 (PMID:23685356), (PMID:26950371), (PMID:29695869)
UniProt
RGD
PMID:23685356, PMID:26950371, PMID:29695869 GO_REF:0000024 NCBI chr  X:155,844,914...155,862,363
Ensembl chr  X:155,844,857...155,862,475
JBrowse link
G Gar1 GAR1 ribonucleoprotein ISS
ISO
GO_REF:0000024
(PMID:29695869)
UniProt
RGD
PMID:29695869 GO_REF:0000024 NCBI chr 2:235,250,453...235,258,464
Ensembl chr 2:235,250,453...235,257,731
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 ISO (PMID:10197982) RGD PMID:10197982 NCBI chr 6:135,107,262...135,112,793
Ensembl chr 6:135,107,271...135,112,775
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO (PMID:10197982) RGD PMID:10197982 NCBI chr 9:17,817,791...17,823,163
Ensembl chr 9:17,817,721...17,823,243
JBrowse link
G Nhp2 NHP2 ribonucleoprotein ISO (PMID:29695869) RGD PMID:29695869 NCBI chr10:34,975,701...34,979,082
Ensembl chr10:34,975,708...34,979,082
JBrowse link
G Nop10 NOP10 ribonucleoprotein ISO (PMID:29695869) RGD PMID:29695869 NCBI chr 3:103,747,654...103,748,739
Ensembl chr 3:103,747,654...103,748,739
JBrowse link
G Parp4 poly (ADP-ribose) polymerase family, member 4 NOT ISO MGI:MGI:109573 (MGI:MGI:3045914|PMID:15169895) RGD PMID:15169895 MGI:MGI:3045914 NCBI chr15:36,809,362...36,911,167 JBrowse link
G Pinx1 PIN2/TERF1 interacting, telomerase inhibitor 1 ISO (PMID:11701125) RGD PMID:11701125 NCBI chr15:47,211,682...47,270,343
Ensembl chr15:47,211,583...47,270,317
JBrowse link
G Pot1 protection of telomeres 1 ISO (PMID:12768206) RGD PMID:12768206 NCBI chr 4:51,888,632...51,946,764
Ensembl chr 4:51,888,634...51,946,715
JBrowse link
G Ptges3 prostaglandin E synthase 3 ISO
IBA
(MGI:MGI:5819359|PMID:10197982)
PMID:21873635
(PMID:10197982), (PMID:19740745)
RGD PMID:10197982, PMID:19740745, PMID:21873635 MGI:MGI:5819359, RGD:13792537 NCBI chr 7:2,479,267...2,497,024
Ensembl chr 7:2,479,311...2,497,013
JBrowse link
G Ptges3l1 prostaglandin E synthase 3-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:45,410,545...45,419,817
Ensembl chr  X:45,410,546...45,419,817
JBrowse link
G Rad50 RAD50 double strand break repair protein ISO
IBA
ISS
(PMID:9705271)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:9705271, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:39,002,130...39,054,042
Ensembl chr10:39,001,498...39,054,142
JBrowse link
G Rpa1 replication protein A1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:62,140,419...62,191,518
Ensembl chr10:62,140,419...62,191,512
JBrowse link
G Telo2 telomere maintenance 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:14,461,581...14,476,812
Ensembl chr10:14,461,839...14,476,785
JBrowse link
G Tep1 telomerase associated protein 1 NOT ISO MGI:MGI:2685589 (MGI:MGI:3045914|PMID:15169895) RGD PMID:15169895 MGI:MGI:3045914 NCBI chr15:27,751,186...27,798,839
Ensembl chr15:27,751,180...27,798,839
JBrowse link
G Terc telomerase RNA component TAS
ISO
MGI:MGI:1857930 (MGI:MGI:1097832|PMID:9335332) RGD PMID:9335332, PMID:10423530 MGI:MGI:1097832, RGD:1299555 NCBI chr 2:116,432,723...116,433,110
Ensembl chr 2:116,432,691...116,433,110
JBrowse link
G Terf1 telomeric repeat binding factor 1 ISO
IBA
(PMID:23685356), (PMID:9034193)
PMID:21873635
RGD PMID:9034193, PMID:23685356, PMID:21873635 RGD:13792537 NCBI chr 5:2,853,455...2,882,731
Ensembl chr 5:2,853,459...2,882,668
JBrowse link
G Tert telomerase reverse transcriptase ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:16043710), (PMID:17940095), (PMID:19701182), (PMID:21531765), (PMID:29695869), (PMID:9443919), (PMID:9454332)
UniProt
RGD
PMID:9443919, PMID:9454332, PMID:16043710, PMID:17940095, PMID:19701182, PMID:21531765, PMID:29695869, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:32,250,876...32,275,330
Ensembl chr 1:32,251,714...32,272,476
JBrowse link
G Wrap53 WD repeat containing, antisense to TP53 ISS
ISO
GO_REF:0000024
(PMID:23685356), (PMID:29695869), (PMID:29804836)
UniProt
RGD
PMID:23685356, PMID:29695869, PMID:29804836 GO_REF:0000024 NCBI chr10:56,169,024...56,185,800
Ensembl chr10:56,169,025...56,185,857
JBrowse link
translesion synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dtl denticleless E3 ubiquitin protein ligase homolog ISO (PMID:20129063) RGD PMID:20129063 NCBI chr13:110,219,276...110,257,345
Ensembl chr13:110,220,283...110,257,367
JBrowse link
G Faap20 FA core complex associated protein 20 ISO
ISS
(PMID:22266823)
GO_REF:0000024
RGD
UniProt
PMID:22266823 GO_REF:0000024 NCBI chr 5:172,648,171...172,655,576
Ensembl chr 5:172,648,950...172,655,576
JBrowse link
G Parp10 poly (ADP-ribose) polymerase family, member 10 ISO (PMID:24695737) RGD PMID:24695737 NCBI chr 7:117,291,592...117,300,878
Ensembl chr 7:117,291,877...117,300,662
JBrowse link
G Pclaf PCNA clamp associated factor ISO
IBA
ISS
(PMID:23000965)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:23000965, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 8:71,514,281...71,526,182
Ensembl chr 8:71,514,281...71,526,182
JBrowse link
G Pcna proliferating cell nuclear antigen ISO
IBA
ISS
(PMID:20129063)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:20129063, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 3:124,880,698...124,884,570
Ensembl chr 3:124,880,698...124,884,570
JBrowse link
G Poli DNA polymerase iota ISO
IBA
MGI:MGI:3055735 (MGI:MGI:3695544|PMID:17114294)
PMID:21873635
RGD PMID:17114294, PMID:21873635 MGI:MGI:3695544, RGD:13792537 NCBI chr18:65,749,107...65,768,805
Ensembl chr18:65,748,908...65,768,781
JBrowse link
G Polk DNA polymerase kappa IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:27,305,718...27,364,906
Ensembl chr 2:27,305,728...27,364,906
JBrowse link
G Poln DNA polymerase nu ISO (PMID:19908865), (PMID:20102227) RGD PMID:19908865, PMID:20102227 NCBI chr14:81,837,764...82,037,999
Ensembl chr14:81,858,737...82,037,747
JBrowse link
G Primpol primase and DNA directed polymerase ISO
IBA
(PMID:24240614), (PMID:24267451)
PMID:21873635
RGD PMID:24240614, PMID:24267451, PMID:21873635 RGD:13792537 NCBI chr16:48,863,385...48,900,409
Ensembl chr16:48,863,418...48,897,795
JBrowse link
G Sprtn SprT-like N-terminal domain IEA
ISO
ISS
GO_REF:0000107
(PMID:22681887), (PMID:22902628), (PMID:23042605), (PMID:23042607)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22681887, PMID:22902628, PMID:23042605, PMID:23042607 GO_REF:0000024, GO_REF:0000107 NCBI chr19:57,649,901...57,657,158
Ensembl chr19:57,650,163...57,654,864
JBrowse link
G Vcp valosin-containing protein ISO
ISS
(PMID:23042605)
GO_REF:0000024
RGD
UniProt
PMID:23042605 GO_REF:0000024 NCBI chr 5:58,426,548...58,445,953
Ensembl chr 5:58,426,549...58,445,953
JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 ISO (PMID:24657165) RGD PMID:24657165 NCBI chr 6:99,401,775...99,425,739
Ensembl chr 6:99,402,360...99,424,019
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20017
    metabolic process 12256
      biosynthetic process 6217
        cellular biosynthetic process 6052
          cellular macromolecule biosynthetic process 5074
            DNA biosynthetic process 183
              DNA amplification + 0
              DNA synthesis involved in DNA repair + 31
              DNA synthesis involved in DNA replication + 0
              RNA-dependent DNA biosynthetic process + 65
              negative regulation of DNA biosynthetic process + 44
              positive regulation of DNA biosynthetic process + 79
              regulation of DNA biosynthetic process + 125
Path 2
Term Annotations click to browse term
  biological_process 20017
    metabolic process 12256
      cellular metabolic process 11064
        heterocycle metabolic process 5634
          nucleobase-containing compound metabolic process 5483
            nucleic acid metabolic process 4980
              DNA metabolic process 919
                DNA biosynthetic process 183
                  DNA amplification + 0
                  DNA synthesis involved in DNA repair + 31
                  DNA synthesis involved in DNA replication + 0
                  RNA-dependent DNA biosynthetic process + 65
                  negative regulation of DNA biosynthetic process + 44
                  positive regulation of DNA biosynthetic process + 79
                  regulation of DNA biosynthetic process + 125
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.