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ONTOLOGY REPORT - ANNOTATIONS


Term:plasma lipoprotein particle organization
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Accession:GO:0071827 term browser browse the term
Definition:A protein-lipid complex subunit organization process that results in the formation, disassembly, or alteration of a plasma lipoprotein particle. A plasma lipoprotein particle is a spherical particle with a hydrophobic core of triglycerides and/or cholesterol esters, surrounded by an amphipathic monolayer of phospholipids, cholesterol and apolipoproteins.
Synonyms:exact_synonym: plasma lipoprotein particle organisation


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chylomicron assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LPCAT3 lysophosphatidylcholine acyltransferase 3 IEA Ensembl GO_REF:0000107 NCBI chr 5:63,707,674...63,746,369
Ensembl chr 5:63,708,010...63,756,476
JBrowse link
G PLAGL2 PLAG1 like zinc finger 2 IEA Ensembl GO_REF:0000107 NCBI chr17:35,840,624...35,856,564
Ensembl chr17:35,840,633...35,856,440
JBrowse link
chylomicron remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIPC lipase C, hepatic type ISO RGD PMID:7897313 RGD:2308767 NCBI chr 1:113,433,684...113,604,139
Ensembl chr 1:113,433,679...113,604,306
JBrowse link
G LPL lipoprotein lipase IEA Ensembl GO_REF:0000107 NCBI chr14:4,104,761...4,134,964
Ensembl chr14:4,104,772...4,135,814
JBrowse link
high-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 ISO (PMID:10431236), (PMID:14754908), (PMID:17305370) BHF-UCL PMID:10431236 PMID:14754908 PMID:17305370 NCBI chr 1:246,144,277...246,278,492
Ensembl chr 1:246,144,277...246,278,492
JBrowse link
G ABCA7 ATP binding cassette subfamily A member 7 IEA Ensembl GO_REF:0000107 NCBI chr 2:77,357,161...77,375,349
Ensembl chr 2:77,357,211...77,375,180
JBrowse link
G APOA1 apolipoprotein A1 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 9:44,216,481...44,218,360
Ensembl chr 9:44,216,393...44,218,978
JBrowse link
G APOA2 apolipoprotein A2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:89,237,514...89,239,126
Ensembl chr 4:89,237,511...89,240,320
JBrowse link
G APOA4 apolipoprotein A4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:44,201,587...44,204,072
Ensembl chr 9:44,201,508...44,204,206
JBrowse link
G APOE apolipoprotein E ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 6:51,373,113...51,375,333
Ensembl chr 6:51,372,259...51,377,794
JBrowse link
G APOM apolipoprotein M IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 7:23,768,974...23,773,324
Ensembl chr 7:23,768,984...23,773,324
JBrowse link
high-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA5 ATP binding cassette subfamily A member 5 IEA Ensembl GO_REF:0000107 NCBI chr12:11,018,692...11,152,916
Ensembl chr12:10,954,541...11,152,727
JBrowse link
G ABCG1 ATP binding cassette subfamily G member 1 ISO (MGI:3852307|PMID:16556852), (MGI:5634884|PMID:21481393) BHF-UCL PMID:16556852 PMID:21481393 MGI:3852307 MGI:5634884 NCBI chr13:205,561,897...205,628,428
Ensembl chr13:205,561,951...205,628,425
JBrowse link
G APOA1 apolipoprotein A1 IEA Ensembl GO_REF:0000107 NCBI chr 9:44,216,481...44,218,360
Ensembl chr 9:44,216,393...44,218,978
JBrowse link
G APOA2 apolipoprotein A2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:89,237,514...89,239,126
Ensembl chr 4:89,237,511...89,240,320
JBrowse link
G APOC3 apolipoprotein C3 ISO (PMID:17438339) BHF-UCL PMID:17438339 NCBI chr 9:44,211,171...44,213,538 JBrowse link
G APOE apolipoprotein E IEA Ensembl GO_REF:0000107 NCBI chr 6:51,373,113...51,375,333
Ensembl chr 6:51,372,259...51,377,794
JBrowse link
G APOM apolipoprotein M IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 7:23,768,974...23,773,324
Ensembl chr 7:23,768,984...23,773,324
JBrowse link
G LCAT lecithin-cholesterol acyltransferase IEA Ensembl GO_REF:0000107 NCBI chr 6:28,550,356...28,553,561
Ensembl chr 6:28,550,357...28,553,567
JBrowse link
G LIPC lipase C, hepatic type ISO (PMID:3244012) BHF-UCL
RGD
PMID:3244012 PMID:8157689 RGD:2308770 NCBI chr 1:113,433,684...113,604,139
Ensembl chr 1:113,433,679...113,604,306
JBrowse link
G LIPG lipase G, endothelial type IEA Ensembl GO_REF:0000107 NCBI chr 1:99,081,940...99,110,671
Ensembl chr 1:99,081,938...99,110,876
JBrowse link
G PLA2G3 phospholipase A2 group III IEA Ensembl GO_REF:0000107 NCBI chr14:47,923,005...47,928,762
Ensembl chr14:47,923,787...47,928,810
JBrowse link
G PLTP phospholipid transfer protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:48,089,789...48,101,604
Ensembl chr17:48,089,785...48,101,515
JBrowse link
G SCARB1 scavenger receptor class B member 1 IEA Ensembl GO_REF:0000107 NCBI chr14:28,301,421...28,393,568
Ensembl chr14:28,301,294...28,393,565
JBrowse link
low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCG1 ATP binding cassette subfamily G member 1 ISO (MGI:3852307|PMID:16556852) BHF-UCL PMID:16556852 MGI:3852307 NCBI chr13:205,561,897...205,628,428
Ensembl chr13:205,561,951...205,628,425
JBrowse link
G APOA2 apolipoprotein A2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:89,237,514...89,239,126
Ensembl chr 4:89,237,511...89,240,320
JBrowse link
G APOB apolipoprotein B IEA Ensembl GO_REF:0000107 NCBI chr 3:117,250,096...117,316,200
Ensembl chr 3:117,250,096...117,316,200
JBrowse link
G APOE apolipoprotein E IEA Ensembl GO_REF:0000107 NCBI chr 6:51,373,113...51,375,333
Ensembl chr 6:51,372,259...51,377,794
JBrowse link
G LIPC lipase C, hepatic type ISO (PMID:3244012)
PMID:9685400
BHF-UCL
RGD
PMID:3244012 PMID:8071607 PMID:9685400 RGD:2308763 RGD:2308769 NCBI chr 1:113,433,684...113,604,139
Ensembl chr 1:113,433,679...113,604,306
JBrowse link
G LOC110259864 group 10 secretory phospholipase A2-like IEA Ensembl GO_REF:0000107 NCBI chr 3:7,623,326...7,641,061
Ensembl chr 3:7,623,311...7,641,082
JBrowse link
G MPO myeloperoxidase IEA Ensembl GO_REF:0000107 NCBI chr12:34,557,031...34,570,091
Ensembl chr12:34,556,408...34,567,904
JBrowse link
G MTTP microsomal triglyceride transfer protein IEA Ensembl GO_REF:0000107 NCBI chr 8:120,820,660...120,871,468
Ensembl chr 8:120,819,142...120,879,388
JBrowse link
G PLA2G12B phospholipase A2 group XIIB ISO (MGI:6095248|PMID:27471003) MGI PMID:27471003 MGI:6095248 NCBI chr14:75,754,525...75,778,933
Ensembl chr14:75,753,714...75,778,802
JBrowse link
G PLA2G2E phospholipase A2 group IIE IEA Ensembl GO_REF:0000107 NCBI chr 6:78,278,080...78,282,253
Ensembl chr 6:78,278,990...78,282,259
JBrowse link
G PLA2G3 phospholipase A2 group III IEA Ensembl GO_REF:0000107 NCBI chr14:47,923,005...47,928,762
Ensembl chr14:47,923,787...47,928,810
JBrowse link
G PLA2G5 phospholipase A2 group V ISO (MGI:6393145|PMID:14962950)
(MGI:5605113|PMID:24910243)
UniProt
MGI
PMID:14962950 PMID:24910243 MGI:5605113 MGI:6393145 NCBI chr 6:78,365,697...78,376,383
Ensembl chr 6:78,365,700...78,406,457
JBrowse link
G PLA2G7 phospholipase A2 group VII IEA Ensembl GO_REF:0000107 NCBI chr 7:41,488,152...41,531,383
Ensembl chr 7:41,486,843...41,531,331
JBrowse link
negative regulation of plasma lipoprotein oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA4 apolipoprotein A4 IEA Ensembl GO_REF:0000107 NCBI chr 9:44,201,587...44,204,072
Ensembl chr 9:44,201,508...44,204,206
JBrowse link
G APOM apolipoprotein M IEA Ensembl GO_REF:0000107 NCBI chr 7:23,768,974...23,773,324
Ensembl chr 7:23,768,984...23,773,324
JBrowse link
G PON1 paraoxonase 1 NOT ISO (PMID:15342686) BHF-UCL PMID:15342686 NCBI chr 9:74,943,646...74,974,720
Ensembl chr 9:74,926,048...74,974,724
JBrowse link
negative regulation of very-low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA1 apolipoprotein A1 IEA Ensembl GO_REF:0000107 NCBI chr 9:44,216,481...44,218,360
Ensembl chr 9:44,216,393...44,218,978
JBrowse link
G APOA2 apolipoprotein A2 ISO (PMID:14967812) BHF-UCL PMID:14967812 NCBI chr 4:89,237,514...89,239,126
Ensembl chr 4:89,237,511...89,240,320
JBrowse link
G APOC3 apolipoprotein C3 ISO (PMID:3973011) BHF-UCL PMID:3973011 NCBI chr 9:44,211,171...44,213,538 JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 IEA Ensembl GO_REF:0000107 NCBI chr 5:83,607,222...83,732,668
Ensembl chr 5:83,604,288...83,684,604
JBrowse link
plasma lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTTP microsomal triglyceride transfer protein ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:120,820,660...120,871,468
Ensembl chr 8:120,819,142...120,879,388
JBrowse link
plasma lipoprotein particle oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLA2G7 phospholipase A2 group VII IEA Ensembl GO_REF:0000107 NCBI chr 7:41,488,152...41,531,383
Ensembl chr 7:41,486,843...41,531,331
JBrowse link
positive regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:246,144,277...246,278,492
Ensembl chr 1:246,144,277...246,278,492
JBrowse link
G NR1H2 nuclear receptor subfamily 1 group H member 2 IEA Ensembl GO_REF:0000107 NCBI chr 6:55,238,536...55,245,457
Ensembl chr 6:55,237,953...55,245,456
JBrowse link
positive regulation of very-low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA5 apolipoprotein A5 ISO (PMID:18635818) BHF-UCL PMID:18635818 NCBI chr 9:44,177,834...44,180,880 JBrowse link
regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LCAT lecithin-cholesterol acyltransferase IEA Ensembl GO_REF:0000107 NCBI chr 6:28,550,356...28,553,561
Ensembl chr 6:28,550,357...28,553,567
JBrowse link
triglyceride-rich lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA2 apolipoprotein A2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:89,237,514...89,239,126
Ensembl chr 4:89,237,511...89,240,320
JBrowse link
G APOA5 apolipoprotein A5 ISO (MGI:3695062|PMID:16166565) MGI PMID:16166565 MGI:3695062 NCBI chr 9:44,177,834...44,180,880 JBrowse link
very-low-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACSL3 acyl-CoA synthetase long chain family member 3 IEA Ensembl GO_REF:0000107 NCBI chr15:124,741,986...124,816,955
Ensembl chr15:124,568,383...124,817,004
JBrowse link
G ARF1 ADP ribosylation factor 1 ISO RGD PMID:15618550 RGD:9684856 NCBI chr 2:51,219,597...51,237,640
Ensembl chr 2:51,219,667...51,237,639
JBrowse link
G CES1 carboxylesterase 1 ISO (MGI:4440377|PMID:20197051) MGI PMID:20197051 MGI:4440377 NCBI chr 6:29,884,249...29,913,330 JBrowse link
G DGAT1 diacylglycerol O-acyltransferase 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:452,890...463,665
Ensembl chr 4:452,861...466,883
JBrowse link
G FECH ferrochelatase ISO (MGI:1930023|PMID:11160364) MGI PMID:11160364 MGI:1930023 NCBI chr 1:106,861,628...106,898,407
Ensembl chr 1:106,854,002...106,898,418
JBrowse link
G LPCAT3 lysophosphatidylcholine acyltransferase 3 IEA Ensembl GO_REF:0000107 NCBI chr 5:63,707,674...63,746,369
Ensembl chr 5:63,708,010...63,756,476
JBrowse link
G MFSD2A major facilitator superfamily domain containing 2A IEA Ensembl GO_REF:0000107 NCBI chr 6:95,738,961...95,753,245
Ensembl chr 6:95,738,973...95,814,953
JBrowse link
G SOAT1 sterol O-acyltransferase 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:121,045,211...121,112,393
Ensembl chr 9:121,045,232...121,113,693
JBrowse link
G SOAT2 sterol O-acyltransferase 2 IEA Ensembl GO_REF:0000107 NCBI chr 5:18,358,941...18,371,262
Ensembl chr 5:18,358,673...18,371,264
JBrowse link
very-low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA1 apolipoprotein A1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:44,216,481...44,218,360
Ensembl chr 9:44,216,393...44,218,978
JBrowse link
G APOA4 apolipoprotein A4 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 9:44,201,587...44,204,072
Ensembl chr 9:44,201,508...44,204,206
JBrowse link
G APOE apolipoprotein E IEA Ensembl GO_REF:0000107 NCBI chr 6:51,373,113...51,375,333
Ensembl chr 6:51,372,259...51,377,794
JBrowse link
G LCAT lecithin-cholesterol acyltransferase IEA Ensembl GO_REF:0000107 NCBI chr 6:28,550,356...28,553,561
Ensembl chr 6:28,550,357...28,553,567
JBrowse link
G LIPC lipase C, hepatic type ISO (PMID:8640403) BHF-UCL
RGD
PMID:6791934 PMID:8640403 RGD:2308780 NCBI chr 1:113,433,684...113,604,139
Ensembl chr 1:113,433,679...113,604,306
JBrowse link
G LPL lipoprotein lipase IEA Ensembl GO_REF:0000107 NCBI chr14:4,104,761...4,134,964
Ensembl chr14:4,104,772...4,135,814
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16530
    multicellular organismal process 8038
      plasma lipoprotein particle organization 39
        plasma lipoprotein particle assembly + 20
        plasma lipoprotein particle disassembly + 0
        plasma lipoprotein particle remodeling + 26
Path 2
Term Annotations click to browse term
  biological_process 16530
    cellular process 15814
      cellular component organization or biogenesis 6008
        cellular component organization 5842
          protein-containing complex subunit organization 1590
            protein-lipid complex subunit organization 42
              plasma lipoprotein particle organization 39
                plasma lipoprotein particle assembly + 20
                plasma lipoprotein particle disassembly + 0
                plasma lipoprotein particle remodeling + 26
paths to the root