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ONTOLOGY REPORT - ANNOTATIONS


Term:plasma lipoprotein particle organization
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Accession:GO:0071827 term browser browse the term
Definition:A protein-lipid complex subunit organization process that results in the formation, disassembly, or alteration of a plasma lipoprotein particle. A plasma lipoprotein particle is a spherical particle with a hydrophobic core of triglycerides and/or cholesterol esters, surrounded by an amphipathic monolayer of phospholipids, cholesterol and apolipoproteins.
Synonyms:exact_synonym: plasma lipoprotein particle organisation


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chylomicron assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA1 apolipoprotein A1 TAS Reactome Reactome:R-HSA-8963888 NCBI chr11:116,835,751...116,837,950
Ensembl chr11:116,835,751...116,837,622
Ensembl chr11:116,835,751...116,837,622
JBrowse link
G APOA2 apolipoprotein A2 TAS Reactome Reactome:R-HSA-8963888 NCBI chr 1:161,222,292...161,223,628
Ensembl chr 1:161,222,292...161,223,631
JBrowse link
G APOA4 apolipoprotein A4 TAS (PMID:16159879) BHF-UCL PMID:16159879 Reactome:R-HSA-8963888 NCBI chr11:116,820,700...116,823,304
Ensembl chr11:116,820,700...116,823,304
JBrowse link
G APOB apolipoprotein B TAS Reactome Reactome:R-HSA-8963888 NCBI chr 2:21,001,429...21,044,073
Ensembl chr 2:21,001,429...21,044,073
JBrowse link
G APOC2 apolipoprotein C2 TAS Reactome Reactome:R-HSA-8963888 NCBI chr19:44,946,051...44,949,565
Ensembl chr19:44,945,971...44,949,566
Ensembl chr19:44,945,971...44,949,566
JBrowse link
G APOC3 apolipoprotein C3 TAS Reactome Reactome:R-HSA-8963888 NCBI chr11:116,829,907...116,833,072
Ensembl chr11:116,829,706...116,833,072
JBrowse link
G APOE apolipoprotein E TAS Reactome Reactome:R-HSA-8963888 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393
JBrowse link
G LPCAT3 lysophosphatidylcholine acyltransferase 3 ISS UniProt GO_REF:0000024 NCBI chr12:6,976,185...7,018,508
Ensembl chr12:6,976,185...7,018,477
JBrowse link
G MTTP microsomal triglyceride transfer protein TAS Reactome Reactome:R-HSA-8963888 NCBI chr 4:99,564,130...99,623,997
Ensembl chr 4:99,563,761...99,623,999
JBrowse link
G P4HB prolyl 4-hydroxylase subunit beta TAS Reactome Reactome:R-HSA-8963888 NCBI chr17:81,843,159...81,860,535
Ensembl chr17:81,843,161...81,860,624
JBrowse link
G PLAGL2 PLAG1 like zinc finger 2 IEA Ensembl GO_REF:0000107 NCBI chr20:32,192,504...32,207,743
Ensembl chr20:32,192,504...32,207,743
JBrowse link
chylomicron remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA1 apolipoprotein A1 TAS Reactome Reactome:R-HSA-8963901 NCBI chr11:116,835,751...116,837,950
Ensembl chr11:116,835,751...116,837,622
Ensembl chr11:116,835,751...116,837,622
JBrowse link
G APOA2 apolipoprotein A2 TAS Reactome Reactome:R-HSA-8963901 NCBI chr 1:161,222,292...161,223,628
Ensembl chr 1:161,222,292...161,223,631
JBrowse link
G APOA4 apolipoprotein A4 IC
TAS
(PMID:2307668) BHF-UCL
Reactome
PMID:2307668 Reactome:R-HSA-8963901 NCBI chr11:116,820,700...116,823,304
Ensembl chr11:116,820,700...116,823,304
JBrowse link
G APOB apolipoprotein B TAS Reactome Reactome:R-HSA-8963901 NCBI chr 2:21,001,429...21,044,073
Ensembl chr 2:21,001,429...21,044,073
JBrowse link
G APOC2 apolipoprotein C2 IC
TAS
(PMID:10727238) BHF-UCL
Reactome
PMID:10727238 Reactome:R-HSA-8963901 NCBI chr19:44,946,051...44,949,565
Ensembl chr19:44,945,971...44,949,566
Ensembl chr19:44,945,971...44,949,566
JBrowse link
G APOC3 apolipoprotein C3 TAS Reactome Reactome:R-HSA-8963901 NCBI chr11:116,829,907...116,833,072
Ensembl chr11:116,829,706...116,833,072
JBrowse link
G APOE apolipoprotein E TAS Reactome Reactome:R-HSA-8963901 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393
JBrowse link
G GPIHBP1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 TAS Reactome Reactome:R-HSA-8963901 NCBI chr 8:143,213,218...143,217,170
Ensembl chr 8:143,213,218...143,217,170
JBrowse link
G LIPC lipase C, hepatic type ISO RGD PMID:7897313 RGD:2308767 NCBI chr15:58,410,457...58,569,844
Ensembl chr15:58,410,569...58,569,844
JBrowse link
G LPL lipoprotein lipase IC
TAS
IMP
(PMID:3973011)
(PMID:11342582)
BHF-UCL
Reactome
UniProt
PMID:3973011 PMID:11342582 Reactome:R-HSA-8963901 NCBI chr 8:19,939,253...19,967,259
Ensembl chr 8:19,901,717...19,967,259
JBrowse link
high-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 TAS
IMP
(PMID:10431236), (PMID:14754908), (PMID:17305370) Reactome
BHF-UCL
PMID:10431236 PMID:14754908 PMID:17305370 Reactome:R-HSA-8963896 NCBI chr 9:104,781,006...104,928,232
Ensembl chr 9:104,781,006...104,928,155
JBrowse link
G ABCA7 ATP binding cassette subfamily A member 7 IDA (PMID:14570867) Alzheimers_University_of_Toronto PMID:14570867 NCBI chr19:1,040,107...1,065,572
Ensembl chr19:1,039,997...1,065,572
Ensembl chr19:1,039,997...1,065,572
JBrowse link
G APOA1 apolipoprotein A1 IDA
IBA
TAS
(PMID:190223)
(PMID:21873635)
BHF-UCL
GO_Central
Reactome
PMID:190223 PMID:21873635 Reactome:R-HSA-8963896 NCBI chr11:116,835,751...116,837,950
Ensembl chr11:116,835,751...116,837,622
Ensembl chr11:116,835,751...116,837,622
JBrowse link
G APOA2 apolipoprotein A2 IDA
IBA
(PMID:218942)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:218942 PMID:21873635 NCBI chr 1:161,222,292...161,223,628
Ensembl chr 1:161,222,292...161,223,631
JBrowse link
G APOA4 apolipoprotein A4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:116,820,700...116,823,304
Ensembl chr11:116,820,700...116,823,304
JBrowse link
G APOA5 apolipoprotein A5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:116,789,367...116,792,420
Ensembl chr11:116,789,367...116,792,420
JBrowse link
G APOE apolipoprotein E IDA (PMID:14754908), (PMID:17305370) UniProt PMID:14754908 PMID:17305370 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393
JBrowse link
G APOM apolipoprotein M ISS
IBA
(PMID:15793583)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:15793583 PMID:21873635 NCBI chr 6:31,652,404...31,658,210
Ensembl chr 6:31,652,416...31,658,210
JBrowse link
G BMP1 bone morphogenetic protein 1 TAS Reactome Reactome:R-HSA-8963896 NCBI chr 8:22,165,372...22,212,326
Ensembl chr 8:22,165,140...22,212,326
JBrowse link
G PRKACA protein kinase cAMP-activated catalytic subunit alpha TAS Reactome Reactome:R-HSA-8963896 NCBI chr19:14,091,688...14,117,762
Ensembl chr19:14,091,688...14,118,084
JBrowse link
G PRKACB protein kinase cAMP-activated catalytic subunit beta TAS Reactome Reactome:R-HSA-8963896 NCBI chr 1:84,078,079...84,238,498
Ensembl chr 1:84,078,062...84,238,498
JBrowse link
G PRKACG protein kinase cAMP-activated catalytic subunit gamma TAS Reactome Reactome:R-HSA-8963896 NCBI chr 9:69,012,504...69,014,113
Ensembl chr 9:69,012,504...69,014,113
Ensembl chr 9:69,012,504...69,014,113
JBrowse link
G ZDHHC8 zinc finger DHHC-type palmitoyltransferase 8 TAS Reactome Reactome:R-HSA-8963896 NCBI chr22:20,131,804...20,148,007
Ensembl chr22:20,129,456...20,148,007
JBrowse link
high-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA5 ATP binding cassette subfamily A member 5 ISS (PMID:20382126) BHF-UCL PMID:20382126 NCBI chr17:69,244,311...69,327,133
Ensembl chr17:69,244,311...69,327,244
JBrowse link
G ABCG1 ATP binding cassette subfamily G member 1 TAS
ISS
(PMID:16556852) Reactome
BHF-UCL
PMID:16556852 Reactome:R-HSA-8964058 NCBI chr21:42,199,689...42,304,387
Ensembl chr21:42,199,689...42,297,244
JBrowse link
G ALB albumin TAS Reactome Reactome:R-HSA-8964058 NCBI chr 4:73,404,287...73,421,482
Ensembl chr 4:73,397,114...73,421,482
JBrowse link
G APOA1 apolipoprotein A1 IC
TAS
IDA
(PMID:4335615)
(PMID:21481393)
BHF-UCL
Reactome
PMID:4335615 PMID:21481393 Reactome:R-HSA-8964058 NCBI chr11:116,835,751...116,837,950
Ensembl chr11:116,835,751...116,837,622
Ensembl chr11:116,835,751...116,837,622
JBrowse link
G APOA2 apolipoprotein A2 IDA
IBA
(PMID:14967812), (PMID:8106353)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:8106353 PMID:14967812 PMID:21873635 NCBI chr 1:161,222,292...161,223,628
Ensembl chr 1:161,222,292...161,223,631
JBrowse link
G APOA4 apolipoprotein A4 IC (PMID:1935934) BHF-UCL PMID:1935934 NCBI chr11:116,820,700...116,823,304
Ensembl chr11:116,820,700...116,823,304
JBrowse link
G APOC1 apolipoprotein C1 TAS (PMID:18992221) BHF-UCL PMID:18992221 NCBI chr19:44,914,325...44,919,346
Ensembl chr19:44,914,247...44,919,349
JBrowse link
G APOC2 apolipoprotein C2 TAS Reactome Reactome:R-HSA-8964058 NCBI chr19:44,946,051...44,949,565
Ensembl chr19:44,945,971...44,949,566
Ensembl chr19:44,945,971...44,949,566
JBrowse link
G APOC3 apolipoprotein C3 IMP
TAS
(PMID:17438339) BHF-UCL
Reactome
PMID:17438339 Reactome:R-HSA-8964058 NCBI chr11:116,829,907...116,833,072
Ensembl chr11:116,829,706...116,833,072
JBrowse link
G APOE apolipoprotein E IGI
TAS
(PMID:12401887) BHF-UCL
Reactome
PMID:12401887 Reactome:R-HSA-8964058 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393
JBrowse link
G APOM apolipoprotein M IMP
IBA
(PMID:18006500)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:18006500 PMID:21873635 NCBI chr 6:31,652,404...31,658,210
Ensembl chr 6:31,652,416...31,658,210
JBrowse link
G CETP cholesteryl ester transfer protein IMP
IBA
IEA
IDA
TAS
(PMID:2586614)
(PMID:21873635)
(PMID:24293641)
BHF-UCL
GO_Central
UniProtKB
Reactome
PMID:2586614 PMID:21873635 PMID:24293641 GO_REF:0000104 Reactome:R-HSA-8964058 NCBI chr16:56,961,950...56,983,845
Ensembl chr16:56,961,923...56,983,845
JBrowse link
G LCAT lecithin-cholesterol acyltransferase TAS
IDA
(PMID:10722751), (PMID:12167653), (PMID:15210842), (PMID:4335615) Reactome
UniProtKB
PMID:4335615 PMID:10722751 PMID:12167653 PMID:15210842 Reactome:R-HSA-8964058 NCBI chr16:67,939,750...67,944,120
Ensembl chr16:67,939,750...67,944,131
JBrowse link
G LIPC lipase C, hepatic type IMP (PMID:3244012) BHF-UCL PMID:3244012 NCBI chr15:58,410,457...58,569,844
Ensembl chr15:58,410,569...58,569,844
JBrowse link
G LIPG lipase G, endothelial type IMP
TAS
(PMID:19136670) BHF-UCL
Reactome
PMID:19136670 Reactome:R-HSA-8964058 NCBI chr18:49,560,699...49,599,185
Ensembl chr18:49,560,699...49,599,185
JBrowse link
G PLA2G3 phospholipase A2 group III IDA (PMID:18801741) UniProt PMID:18801741 NCBI chr22:31,134,807...31,140,508
Ensembl chr22:31,134,807...31,140,508
JBrowse link
G PLTP phospholipid transfer protein IBA
IDA
(PMID:21873635)
(PMID:24369175), (PMID:29883800), (PMID:9132017)
GO_Central
AgBase
PMID:9132017 PMID:21873635 PMID:24369175 PMID:29883800 NCBI chr20:45,898,620...45,912,155
Ensembl chr20:45,898,621...45,912,155
JBrowse link
G SCARB1 scavenger receptor class B member 1 ISS BHF-UCL GO_REF:0000024 NCBI chr12:124,776,856...124,863,864
Ensembl chr12:124,776,856...124,882,668
JBrowse link
intermediate-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIPC lipase C, hepatic type TAS (PMID:2839510) BHF-UCL PMID:2839510 NCBI chr15:58,410,457...58,569,844
Ensembl chr15:58,410,569...58,569,844
JBrowse link
low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCG1 ATP binding cassette subfamily G member 1 ISS (PMID:16556852) BHF-UCL PMID:16556852 NCBI chr21:42,199,689...42,304,387
Ensembl chr21:42,199,689...42,297,244
JBrowse link
G AGT angiotensinogen NAS (PMID:17069818) BHF-UCL PMID:17069818 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,702,523...230,714,122
JBrowse link
G AGTR1 angiotensin II receptor type 1 NAS (PMID:17069818) BHF-UCL PMID:17069818 NCBI chr 3:148,697,903...148,743,003
Ensembl chr 3:148,697,784...148,743,008
JBrowse link
G APOA2 apolipoprotein A2 IDA
IBA
(PMID:8106353)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:8106353 PMID:21873635 NCBI chr 1:161,222,292...161,223,628
Ensembl chr 1:161,222,292...161,223,631
JBrowse link
G APOB apolipoprotein B IMP
TAS
(PMID:15797858) BHF-UCL
Reactome
PMID:15797858 Reactome:R-HSA-8964041 NCBI chr 2:21,001,429...21,044,073
Ensembl chr 2:21,001,429...21,044,073
JBrowse link
G APOE apolipoprotein E IEA Ensembl GO_REF:0000107 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393
JBrowse link
G CETP cholesteryl ester transfer protein IDA
IBA
TAS
(PMID:2833496)
(PMID:21873635)
BHF-UCL
GO_Central
Reactome
PMID:2833496 PMID:21873635 Reactome:R-HSA-8964041 NCBI chr16:56,961,950...56,983,845
Ensembl chr16:56,961,923...56,983,845
JBrowse link
G LIPC lipase C, hepatic type IMP (PMID:3244012) BHF-UCL PMID:3244012 NCBI chr15:58,410,457...58,569,844
Ensembl chr15:58,410,569...58,569,844
JBrowse link
G LPA lipoprotein(a) TAS Reactome Reactome:R-HSA-8964041 NCBI chr 6:160,531,482...160,664,275
Ensembl chr 6:160,531,483...160,664,259
Ensembl chr 6:160,531,483...160,664,259
JBrowse link
G MPO myeloperoxidase IDA (PMID:10772654) BHF-UCL PMID:10772654 NCBI chr17:58,269,855...58,280,935
Ensembl chr17:58,269,855...58,280,935
JBrowse link
G MTTP microsomal triglyceride transfer protein IEA Ensembl GO_REF:0000107 NCBI chr 4:99,564,130...99,623,997
Ensembl chr 4:99,563,761...99,623,999
JBrowse link
G PLA2G10 phospholipase A2 group X IDA (PMID:12021277) UniProt PMID:12021277 NCBI chr16:14,672,548...14,694,662
Ensembl chr16:14,672,545...14,694,669
Ensembl chr16:14,672,545...14,694,669
JBrowse link
G PLA2G12B phospholipase A2 group XIIB ISO (MGI:6095248|PMID:27471003) MGI PMID:27471003 MGI:6095248 NCBI chr10:72,934,762...72,955,044
Ensembl chr10:72,934,762...72,954,806
JBrowse link
G PLA2G2A phospholipase A2 group IIA TAS (PMID:18827909) BHF-UCL PMID:18827909 NCBI chr 1:19,975,431...19,980,434
Ensembl chr 1:19,975,431...19,980,416
JBrowse link
G PLA2G2E phospholipase A2 group IIE IEA Ensembl GO_REF:0000107 NCBI chr 1:19,920,009...19,923,617
Ensembl chr 1:19,920,009...19,923,617
JBrowse link
G PLA2G3 phospholipase A2 group III IDA (PMID:18801741) UniProt PMID:18801741 NCBI chr22:31,134,807...31,140,508
Ensembl chr22:31,134,807...31,140,508
JBrowse link
G PLA2G5 phospholipase A2 group V ISS UniProt GO_REF:0000024 NCBI chr 1:20,028,349...20,091,911
Ensembl chr 1:20,028,179...20,091,911
JBrowse link
G PLA2G7 phospholipase A2 group VII IDA (PMID:8624782) BHF-UCL PMID:8624782 NCBI chr 6:46,700,558...46,735,836
Ensembl chr 6:46,704,201...46,735,693
JBrowse link
negative regulation of plasma lipoprotein oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA4 apolipoprotein A4 IDA (PMID:16945374) BHF-UCL PMID:16945374 NCBI chr11:116,820,700...116,823,304
Ensembl chr11:116,820,700...116,823,304
JBrowse link
G APOM apolipoprotein M IDA (PMID:16682745), (PMID:22204862) BHF-UCL PMID:16682745 PMID:22204862 NCBI chr 6:31,652,404...31,658,210
Ensembl chr 6:31,652,416...31,658,210
JBrowse link
G PON1 paraoxonase 1 NOT IDA (PMID:15342686) BHF-UCL PMID:15342686 NCBI chr 7:95,297,676...95,324,532
Ensembl chr 7:95,297,676...95,324,532
JBrowse link
negative regulation of very-low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA1 apolipoprotein A1 IDA (PMID:14967812) BHF-UCL PMID:14967812 NCBI chr11:116,835,751...116,837,950
Ensembl chr11:116,835,751...116,837,622
Ensembl chr11:116,835,751...116,837,622
JBrowse link
G APOA2 apolipoprotein A2 IDA (PMID:14967812) BHF-UCL PMID:14967812 NCBI chr 1:161,222,292...161,223,628
Ensembl chr 1:161,222,292...161,223,631
JBrowse link
G APOC3 apolipoprotein C3 IC
IDA
(PMID:18635818)
(PMID:3973011)
BHF-UCL PMID:3973011 PMID:18635818 NCBI chr11:116,829,907...116,833,072
Ensembl chr11:116,829,706...116,833,072
JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 IDA (PMID:27471003) MGI PMID:27471003 NCBI chr12:100,473,866...100,564,414
Ensembl chr12:100,473,708...100,564,414
JBrowse link
plasma lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTTP microsomal triglyceride transfer protein IMP
IDA
(PMID:8876250)
(PMID:16478722), (PMID:23475612), (PMID:26224785)
UniProt PMID:8876250 PMID:16478722 PMID:23475612 PMID:26224785 NCBI chr 4:99,564,130...99,623,997
Ensembl chr 4:99,563,761...99,623,999
JBrowse link
plasma lipoprotein particle oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLA2G7 phospholipase A2 group VII IDA (PMID:8624782) BHF-UCL PMID:8624782 NCBI chr 6:46,700,558...46,735,836
Ensembl chr 6:46,704,201...46,735,693
JBrowse link
plasma lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOC1 apolipoprotein C1 IDA (PMID:10978346) BHF-UCL PMID:10978346 NCBI chr19:44,914,325...44,919,346
Ensembl chr19:44,914,247...44,919,349
JBrowse link
positive regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 ISS UniProt GO_REF:0000024 NCBI chr 9:104,781,006...104,928,232
Ensembl chr 9:104,781,006...104,928,155
JBrowse link
G NR1H2 nuclear receptor subfamily 1 group H member 2 IEA Ensembl GO_REF:0000107 NCBI chr19:50,376,457...50,383,388
Ensembl chr19:50,329,653...50,383,388
JBrowse link
positive regulation of very-low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA5 apolipoprotein A5 IDA (PMID:18635818) BHF-UCL PMID:18635818 NCBI chr11:116,789,367...116,792,420
Ensembl chr11:116,789,367...116,792,420
JBrowse link
G APOC2 apolipoprotein C2 IC (PMID:10727238) BHF-UCL PMID:10727238 NCBI chr19:44,946,051...44,949,565
Ensembl chr19:44,945,971...44,949,566
Ensembl chr19:44,945,971...44,949,566
JBrowse link
regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 TAS (PMID:24097981) BHF-UCL PMID:24097981 NCBI chr 9:104,781,006...104,928,232
Ensembl chr 9:104,781,006...104,928,155
JBrowse link
G LCAT lecithin-cholesterol acyltransferase IEA Ensembl GO_REF:0000107 NCBI chr16:67,939,750...67,944,120
Ensembl chr16:67,939,750...67,944,131
JBrowse link
triglyceride-rich lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA2 apolipoprotein A2 IDA
IBA
(PMID:14967812)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:14967812 PMID:21873635 NCBI chr 1:161,222,292...161,223,628
Ensembl chr 1:161,222,292...161,223,631
JBrowse link
G APOA5 apolipoprotein A5 IEA Ensembl GO_REF:0000107 NCBI chr11:116,789,367...116,792,420
Ensembl chr11:116,789,367...116,792,420
JBrowse link
G APOC2 apolipoprotein C2 TAS (PMID:17018885) BHF-UCL PMID:17018885 NCBI chr19:44,946,051...44,949,565
Ensembl chr19:44,945,971...44,949,566
Ensembl chr19:44,945,971...44,949,566
JBrowse link
very-low-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACSL3 acyl-CoA synthetase long chain family member 3 IMP (PMID:18003621) UniProtKB PMID:18003621 NCBI chr 2:222,861,036...222,944,639
Ensembl chr 2:222,860,942...222,944,639
JBrowse link
G APOB apolipoprotein B IC
TAS
(PMID:15308631) BHF-UCL
Reactome
PMID:15308631 Reactome:R-HSA-8866423 NCBI chr 2:21,001,429...21,044,073
Ensembl chr 2:21,001,429...21,044,073
JBrowse link
G APOC1 apolipoprotein C1 TAS (PMID:18992221) Reactome PMID:18992221 Reactome:R-HSA-8866423 NCBI chr19:44,914,325...44,919,346
Ensembl chr19:44,914,247...44,919,349
JBrowse link
G APOC3 apolipoprotein C3 TAS (PMID:18399797) BHF-UCL PMID:18399797 NCBI chr11:116,829,907...116,833,072
Ensembl chr11:116,829,706...116,833,072
JBrowse link
G APOC4 apolipoprotein C4 TAS Reactome Reactome:R-HSA-8866423 NCBI chr19:44,942,237...44,945,496
Ensembl chr19:44,942,237...44,945,496
JBrowse link
G ARF1 ADP ribosylation factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:228,082,708...228,099,212
Ensembl chr 1:228,082,660...228,099,212
JBrowse link
G CES1 carboxylesterase 1 ISO (MGI:4440377|PMID:20197051) MGI PMID:20197051 MGI:4440377 NCBI chr16:55,802,851...55,833,127
Ensembl chr16:55,802,851...55,833,337
JBrowse link
G DGAT1 diacylglycerol O-acyltransferase 1 IMP (PMID:15308631) BHF-UCL PMID:15308631 NCBI chr 8:144,314,584...144,326,852
Ensembl chr 8:144,314,584...144,326,910
JBrowse link
G FECH ferrochelatase ISO (MGI:1930023|PMID:11160364) MGI PMID:11160364 MGI:1930023 NCBI chr18:57,544,377...57,586,708
Ensembl chr18:57,544,389...57,586,702
Ensembl chr18:57,544,389...57,586,702
JBrowse link
G LPCAT3 lysophosphatidylcholine acyltransferase 3 ISS UniProt GO_REF:0000024 NCBI chr12:6,976,185...7,018,508
Ensembl chr12:6,976,185...7,018,477
JBrowse link
G MFSD2A major facilitator superfamily domain containing 2A ISS ARUK-UCL GO_REF:0000024 NCBI chr 1:39,955,145...39,969,956
Ensembl chr 1:39,955,112...39,969,968
JBrowse link
G MTTP microsomal triglyceride transfer protein TAS Reactome Reactome:R-HSA-8866423 NCBI chr 4:99,564,130...99,623,997
Ensembl chr 4:99,563,761...99,623,999
JBrowse link
G P4HB prolyl 4-hydroxylase subunit beta TAS Reactome Reactome:R-HSA-8866423 NCBI chr17:81,843,159...81,860,535
Ensembl chr17:81,843,161...81,860,624
JBrowse link
G SOAT1 sterol O-acyltransferase 1 IMP (PMID:15308631) BHF-UCL PMID:15308631 NCBI chr 1:179,293,719...179,358,680
Ensembl chr 1:179,293,714...179,358,680
JBrowse link
G SOAT2 sterol O-acyltransferase 2 IMP (PMID:15308631) BHF-UCL PMID:15308631 NCBI chr12:53,103,486...53,124,535
Ensembl chr12:53,103,486...53,124,535
JBrowse link
very-low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA1 apolipoprotein A1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:116,835,751...116,837,950
Ensembl chr11:116,835,751...116,837,622
Ensembl chr11:116,835,751...116,837,622
JBrowse link
G APOA4 apolipoprotein A4 IDA
IBA
(PMID:2307668)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:2307668 PMID:21873635 NCBI chr11:116,820,700...116,823,304
Ensembl chr11:116,820,700...116,823,304
JBrowse link
G APOA5 apolipoprotein A5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:116,789,367...116,792,420
Ensembl chr11:116,789,367...116,792,420
JBrowse link
G APOC2 apolipoprotein C2 TAS (PMID:15778093) BHF-UCL PMID:15778093 NCBI chr19:44,946,051...44,949,565
Ensembl chr19:44,945,971...44,949,566
Ensembl chr19:44,945,971...44,949,566
JBrowse link
G APOE apolipoprotein E IGI
IDA
(PMID:12401887)
(PMID:15654758)
BHF-UCL PMID:12401887 PMID:15654758 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393
JBrowse link
G CETP cholesteryl ester transfer protein IDA
IBA
IEA
(PMID:24293641), (PMID:2833496)
(PMID:21873635)
UniProtKB
GO_Central
PMID:2833496 PMID:21873635 PMID:24293641 GO_REF:0000104 NCBI chr16:56,961,950...56,983,845
Ensembl chr16:56,961,923...56,983,845
JBrowse link
G LCAT lecithin-cholesterol acyltransferase IDA (PMID:15654758) BHF-UCL PMID:15654758 NCBI chr16:67,939,750...67,944,120
Ensembl chr16:67,939,750...67,944,131
JBrowse link
G LIPC lipase C, hepatic type IDA (PMID:8640403) BHF-UCL PMID:8640403 NCBI chr15:58,410,457...58,569,844
Ensembl chr15:58,410,569...58,569,844
JBrowse link
G LPL lipoprotein lipase IDA
ISS
(PMID:3973011) BHF-UCL PMID:3973011 GO_REF:0000024 NCBI chr 8:19,939,253...19,967,259
Ensembl chr 8:19,901,717...19,967,259
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18677
    multicellular organismal process 8790
      plasma lipoprotein particle organization 55
        plasma lipoprotein particle assembly + 32
        plasma lipoprotein particle disassembly + 0
        plasma lipoprotein particle remodeling + 35
Path 2
Term Annotations click to browse term
  biological_process 18677
    cellular process 17725
      cellular component organization or biogenesis 7174
        cellular component organization 6985
          protein-containing complex subunit organization 2084
            protein-lipid complex subunit organization 59
              plasma lipoprotein particle organization 55
                plasma lipoprotein particle assembly + 32
                plasma lipoprotein particle disassembly + 0
                plasma lipoprotein particle remodeling + 35
paths to the root