Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References FTP Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper Genome Scanner
Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:plasma lipoprotein particle organization
go back to main search page
Accession:GO:0071827 term browser browse the term
Definition:A protein-lipid complex subunit organization process that results in the formation, disassembly, or alteration of a plasma lipoprotein particle. A plasma lipoprotein particle is a spherical particle with a hydrophobic core of triglycerides and/or cholesterol esters, surrounded by an amphipathic monolayer of phospholipids, cholesterol and apolipoproteins.
Synonyms:exact_synonym: plasma lipoprotein particle organisation

show annotations for term's descendants           Sort by:
 
chylomicron assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA1 apolipoprotein A1 TAS Reactome Reactome:R-HSA-8963888 NCBI chr11:116,835,751...116,837,950
Ensembl chr11:116,835,751...116,837,622
Ensembl chr11:116,835,751...116,837,622 		JBrowse link
G APOA2 apolipoprotein A2 TAS Reactome Reactome:R-HSA-8963888 NCBI chr 1:161,222,292...161,223,628
Ensembl chr 1:161,222,292...161,223,631 		JBrowse link
G APOA4 apolipoprotein A4 TAS (PMID:16159879) BHF-UCL PMID:16159879 Reactome:R-HSA-8963888 NCBI chr11:116,820,700...116,823,304
Ensembl chr11:116,820,700...116,823,304 		JBrowse link
G APOB apolipoprotein B TAS Reactome Reactome:R-HSA-8963888 NCBI chr 2:21,001,429...21,044,073
Ensembl chr 2:21,001,429...21,044,073 		JBrowse link
G APOC2 apolipoprotein C2 TAS Reactome Reactome:R-HSA-8963888 NCBI chr19:44,946,051...44,949,565
Ensembl chr19:44,945,971...44,949,566
Ensembl chr19:44,945,971...44,949,566 		JBrowse link
G APOC3 apolipoprotein C3 TAS Reactome Reactome:R-HSA-8963888 NCBI chr11:116,829,907...116,833,072
Ensembl chr11:116,829,706...116,833,072 		JBrowse link
G APOE apolipoprotein E TAS Reactome Reactome:R-HSA-8963888 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393 		JBrowse link
G LPCAT3 lysophosphatidylcholine acyltransferase 3 ISS UniProt GO_REF:0000024 NCBI chr12:6,976,185...7,018,508
Ensembl chr12:6,976,185...7,018,477 		JBrowse link
G MTTP microsomal triglyceride transfer protein TAS Reactome Reactome:R-HSA-8963888 NCBI chr 4:99,564,130...99,623,997
Ensembl chr 4:99,563,761...99,623,999 		JBrowse link
G P4HB prolyl 4-hydroxylase subunit beta TAS Reactome Reactome:R-HSA-8963888 NCBI chr17:81,843,159...81,860,535
Ensembl chr17:81,843,161...81,860,624 		JBrowse link
G PLAGL2 PLAG1 like zinc finger 2 IEA Ensembl GO_REF:0000107 NCBI chr20:32,192,504...32,207,743
Ensembl chr20:32,192,504...32,207,743 		JBrowse link
chylomicron remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA1 apolipoprotein A1 TAS Reactome Reactome:R-HSA-8963901 NCBI chr11:116,835,751...116,837,950
Ensembl chr11:116,835,751...116,837,622
Ensembl chr11:116,835,751...116,837,622 		JBrowse link
G APOA2 apolipoprotein A2 TAS Reactome Reactome:R-HSA-8963901 NCBI chr 1:161,222,292...161,223,628
Ensembl chr 1:161,222,292...161,223,631 		JBrowse link
G APOA4 apolipoprotein A4 IC
TAS		 (PMID:2307668) BHF-UCL
Reactome		 PMID:2307668 Reactome:R-HSA-8963901 NCBI chr11:116,820,700...116,823,304
Ensembl chr11:116,820,700...116,823,304 		JBrowse link
G APOB apolipoprotein B TAS Reactome Reactome:R-HSA-8963901 NCBI chr 2:21,001,429...21,044,073
Ensembl chr 2:21,001,429...21,044,073 		JBrowse link
G APOC2 apolipoprotein C2 IC
TAS		 (PMID:10727238) BHF-UCL
Reactome		 PMID:10727238 Reactome:R-HSA-8963901 NCBI chr19:44,946,051...44,949,565
Ensembl chr19:44,945,971...44,949,566
Ensembl chr19:44,945,971...44,949,566 		JBrowse link
G APOC3 apolipoprotein C3 TAS Reactome Reactome:R-HSA-8963901 NCBI chr11:116,829,907...116,833,072
Ensembl chr11:116,829,706...116,833,072 		JBrowse link
G APOE apolipoprotein E TAS Reactome Reactome:R-HSA-8963901 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393 		JBrowse link
G GPIHBP1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 TAS Reactome Reactome:R-HSA-8963901 NCBI chr 8:143,213,218...143,217,170
Ensembl chr 8:143,213,218...143,217,170 		JBrowse link
G LIPC lipase C, hepatic type ISO RGD PMID:7897313 RGD:2308767 NCBI chr15:58,410,457...58,569,844
Ensembl chr15:58,410,569...58,569,844 		JBrowse link
G LPL lipoprotein lipase IC
TAS
IMP		 (PMID:3973011)
(PMID:11342582)		 BHF-UCL
Reactome
UniProt		 PMID:3973011 PMID:11342582 Reactome:R-HSA-8963901 NCBI chr 8:19,939,253...19,967,259
Ensembl chr 8:19,901,717...19,967,259 		JBrowse link
high-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 TAS
IMP		 (PMID:10431236), (PMID:14754908), (PMID:17305370) Reactome
BHF-UCL		 PMID:10431236 PMID:14754908 PMID:17305370 Reactome:R-HSA-8963896 NCBI chr 9:104,781,006...104,928,232
Ensembl chr 9:104,781,006...104,928,155 		JBrowse link
G ABCA7 ATP binding cassette subfamily A member 7 IDA (PMID:14570867) Alzheimers_University_of_Toronto PMID:14570867 NCBI chr19:1,040,107...1,065,572
Ensembl chr19:1,039,997...1,065,572
Ensembl chr19:1,039,997...1,065,572 		JBrowse link
G APOA1 apolipoprotein A1 IDA
IBA
TAS		 (PMID:190223)
(PMID:21873635)		 BHF-UCL
GO_Central
Reactome		 PMID:190223 PMID:21873635 Reactome:R-HSA-8963896 NCBI chr11:116,835,751...116,837,950
Ensembl chr11:116,835,751...116,837,622
Ensembl chr11:116,835,751...116,837,622 		JBrowse link
G APOA2 apolipoprotein A2 IDA
IBA		 (PMID:218942)
(PMID:21873635)		 BHF-UCL
GO_Central		 PMID:218942 PMID:21873635 NCBI chr 1:161,222,292...161,223,628
Ensembl chr 1:161,222,292...161,223,631 		JBrowse link
G APOA4 apolipoprotein A4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:116,820,700...116,823,304
Ensembl chr11:116,820,700...116,823,304 		JBrowse link
G APOA5 apolipoprotein A5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:116,789,367...116,792,420
Ensembl chr11:116,789,367...116,792,420 		JBrowse link
G APOE apolipoprotein E IDA (PMID:14754908), (PMID:17305370) UniProt PMID:14754908 PMID:17305370 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393 		JBrowse link
G APOM apolipoprotein M ISS
IBA		 (PMID:15793583)
(PMID:21873635)		 BHF-UCL
GO_Central		 PMID:15793583 PMID:21873635 NCBI chr 6:31,652,404...31,658,210
Ensembl chr 6:31,652,416...31,658,210 		JBrowse link
G BMP1 bone morphogenetic protein 1 TAS Reactome Reactome:R-HSA-8963896 NCBI chr 8:22,165,372...22,212,326
Ensembl chr 8:22,165,140...22,212,326 		JBrowse link
G PRKACA protein kinase cAMP-activated catalytic subunit alpha TAS Reactome Reactome:R-HSA-8963896 NCBI chr19:14,091,688...14,117,762
Ensembl chr19:14,091,688...14,118,084 		JBrowse link
G PRKACB protein kinase cAMP-activated catalytic subunit beta TAS Reactome Reactome:R-HSA-8963896 NCBI chr 1:84,078,079...84,238,498
Ensembl chr 1:84,078,062...84,238,498 		JBrowse link
G PRKACG protein kinase cAMP-activated catalytic subunit gamma TAS Reactome Reactome:R-HSA-8963896 NCBI chr 9:69,012,504...69,014,113
Ensembl chr 9:69,012,504...69,014,113
Ensembl chr 9:69,012,504...69,014,113 		JBrowse link
G ZDHHC8 zinc finger DHHC-type palmitoyltransferase 8 TAS Reactome Reactome:R-HSA-8963896 NCBI chr22:20,131,804...20,148,007
Ensembl chr22:20,129,456...20,148,007 		JBrowse link
high-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA5 ATP binding cassette subfamily A member 5 ISS (PMID:20382126) BHF-UCL PMID:20382126 NCBI chr17:69,244,311...69,327,133
Ensembl chr17:69,244,311...69,327,244 		JBrowse link
G ABCG1 ATP binding cassette subfamily G member 1 TAS
ISS		 (PMID:16556852) Reactome
BHF-UCL		 PMID:16556852 Reactome:R-HSA-8964058 NCBI chr21:42,199,689...42,304,387
Ensembl chr21:42,199,689...42,297,244 		JBrowse link
G ALB albumin TAS Reactome Reactome:R-HSA-8964058 NCBI chr 4:73,404,287...73,421,482
Ensembl chr 4:73,397,114...73,421,482 		JBrowse link
G APOA1 apolipoprotein A1 IC
TAS
IDA		 (PMID:4335615)
(PMID:21481393)		 BHF-UCL
Reactome		 PMID:4335615 PMID:21481393 Reactome:R-HSA-8964058 NCBI chr11:116,835,751...116,837,950
Ensembl chr11:116,835,751...116,837,622
Ensembl chr11:116,835,751...116,837,622 		JBrowse link
G APOA2 apolipoprotein A2 IDA
IBA		 (PMID:14967812), (PMID:8106353)
(PMID:21873635)		 BHF-UCL
GO_Central		 PMID:8106353 PMID:14967812 PMID:21873635 NCBI chr 1:161,222,292...161,223,628
Ensembl chr 1:161,222,292...161,223,631 		JBrowse link
G APOA4 apolipoprotein A4 IC (PMID:1935934) BHF-UCL PMID:1935934 NCBI chr11:116,820,700...116,823,304
Ensembl chr11:116,820,700...116,823,304 		JBrowse link
G APOC1 apolipoprotein C1 TAS (PMID:18992221) BHF-UCL PMID:18992221 NCBI chr19:44,914,325...44,919,346
Ensembl chr19:44,914,247...44,919,349 		JBrowse link
G APOC2 apolipoprotein C2 TAS Reactome Reactome:R-HSA-8964058 NCBI chr19:44,946,051...44,949,565
Ensembl chr19:44,945,971...44,949,566
Ensembl chr19:44,945,971...44,949,566 		JBrowse link
G APOC3 apolipoprotein C3 IMP
TAS		 (PMID:17438339) BHF-UCL
Reactome		 PMID:17438339 Reactome:R-HSA-8964058 NCBI chr11:116,829,907...116,833,072
Ensembl chr11:116,829,706...116,833,072 		JBrowse link
G APOE apolipoprotein E IGI
TAS		 (PMID:12401887) BHF-UCL
Reactome		 PMID:12401887 Reactome:R-HSA-8964058 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393 		JBrowse link
G APOM apolipoprotein M IMP
IBA		 (PMID:18006500)
(PMID:21873635)		 BHF-UCL
GO_Central		 PMID:18006500 PMID:21873635 NCBI chr 6:31,652,404...31,658,210
Ensembl chr 6:31,652,416...31,658,210 		JBrowse link
G CETP cholesteryl ester transfer protein IMP
IBA
IEA
IDA
TAS		 (PMID:2586614)
(PMID:21873635)
(PMID:24293641)		 BHF-UCL
GO_Central
UniProtKB
Reactome		 PMID:2586614 PMID:21873635 PMID:24293641 GO_REF:0000104 Reactome:R-HSA-8964058 NCBI chr16:56,961,950...56,983,845
Ensembl chr16:56,961,923...56,983,845 		JBrowse link
G LCAT lecithin-cholesterol acyltransferase TAS
IDA		 (PMID:10722751), (PMID:12167653), (PMID:15210842), (PMID:4335615) Reactome
UniProtKB		 PMID:4335615 PMID:10722751 PMID:12167653 PMID:15210842 Reactome:R-HSA-8964058 NCBI chr16:67,939,750...67,944,120
Ensembl chr16:67,939,750...67,944,131 		JBrowse link
G LIPC lipase C, hepatic type IMP (PMID:3244012) BHF-UCL PMID:3244012 NCBI chr15:58,410,457...58,569,844
Ensembl chr15:58,410,569...58,569,844 		JBrowse link
G LIPG lipase G, endothelial type IMP
TAS		 (PMID:19136670) BHF-UCL
Reactome		 PMID:19136670 Reactome:R-HSA-8964058 NCBI chr18:49,560,699...49,599,185
Ensembl chr18:49,560,699...49,599,185 		JBrowse link
G PLA2G3 phospholipase A2 group III IDA (PMID:18801741) UniProt PMID:18801741 NCBI chr22:31,134,807...31,140,508
Ensembl chr22:31,134,807...31,140,508 		JBrowse link
G PLTP phospholipid transfer protein IBA
IDA		 (PMID:21873635)
(PMID:24369175), (PMID:29883800), (PMID:9132017)		 GO_Central
AgBase		 PMID:9132017 PMID:21873635 PMID:24369175 PMID:29883800 NCBI chr20:45,898,620...45,912,155
Ensembl chr20:45,898,621...45,912,155 		JBrowse link
G SCARB1 scavenger receptor class B member 1 ISS BHF-UCL GO_REF:0000024 NCBI chr12:124,776,856...124,863,864
Ensembl chr12:124,776,856...124,882,668 		JBrowse link
intermediate-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIPC lipase C, hepatic type TAS (PMID:2839510) BHF-UCL PMID:2839510 NCBI chr15:58,410,457...58,569,844
Ensembl chr15:58,410,569...58,569,844 		JBrowse link
low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCG1 ATP binding cassette subfamily G member 1 ISS (PMID:16556852) BHF-UCL PMID:16556852 NCBI chr21:42,199,689...42,304,387
Ensembl chr21:42,199,689...42,297,244 		JBrowse link
G AGT angiotensinogen NAS (PMID:17069818) BHF-UCL PMID:17069818 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,702,523...230,714,122 		JBrowse link
G AGTR1 angiotensin II receptor type 1 NAS (PMID:17069818) BHF-UCL PMID:17069818 NCBI chr 3:148,697,903...148,743,003
Ensembl chr 3:148,697,784...148,743,008 		JBrowse link
G APOA2 apolipoprotein A2 IDA
IBA		 (PMID:8106353)
(PMID:21873635)		 BHF-UCL
GO_Central		 PMID:8106353 PMID:21873635 NCBI chr 1:161,222,292...161,223,628
Ensembl chr 1:161,222,292...161,223,631 		JBrowse link
G APOB apolipoprotein B IMP
TAS		 (PMID:15797858) BHF-UCL
Reactome		 PMID:15797858 Reactome:R-HSA-8964041 NCBI chr 2:21,001,429...21,044,073
Ensembl chr 2:21,001,429...21,044,073 		JBrowse link
G APOE apolipoprotein E IEA Ensembl GO_REF:0000107 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393 		JBrowse link
G CETP cholesteryl ester transfer protein IDA
IBA
TAS		 (PMID:2833496)
(PMID:21873635)		 BHF-UCL
GO_Central
Reactome		 PMID:2833496 PMID:21873635 Reactome:R-HSA-8964041 NCBI chr16:56,961,950...56,983,845
Ensembl chr16:56,961,923...56,983,845 		JBrowse link
G LIPC lipase C, hepatic type IMP (PMID:3244012) BHF-UCL PMID:3244012 NCBI chr15:58,410,457...58,569,844
Ensembl chr15:58,410,569...58,569,844 		JBrowse link
G LPA lipoprotein(a) TAS Reactome Reactome:R-HSA-8964041 NCBI chr 6:160,531,482...160,664,275
Ensembl chr 6:160,531,483...160,664,259
Ensembl chr 6:160,531,483...160,664,259 		JBrowse link
G MPO myeloperoxidase IDA (PMID:10772654) BHF-UCL PMID:10772654 NCBI chr17:58,269,855...58,280,935
Ensembl chr17:58,269,855...58,280,935 		JBrowse link
G MTTP microsomal triglyceride transfer protein IEA Ensembl GO_REF:0000107 NCBI chr 4:99,564,130...99,623,997
Ensembl chr 4:99,563,761...99,623,999 		JBrowse link
G PLA2G10 phospholipase A2 group X IDA (PMID:12021277) UniProt PMID:12021277 NCBI chr16:14,672,548...14,694,662
Ensembl chr16:14,672,545...14,694,669
Ensembl chr16:14,672,545...14,694,669 		JBrowse link
G PLA2G12B phospholipase A2 group XIIB ISO (MGI:6095248|PMID:27471003) MGI PMID:27471003 MGI:6095248 NCBI chr10:72,934,762...72,955,044
Ensembl chr10:72,934,762...72,954,806 		JBrowse link
G PLA2G2A phospholipase A2 group IIA TAS (PMID:18827909) BHF-UCL PMID:18827909 NCBI chr 1:19,975,431...19,980,434
Ensembl chr 1:19,975,431...19,980,416 		JBrowse link
G PLA2G2E phospholipase A2 group IIE IEA Ensembl GO_REF:0000107 NCBI chr 1:19,920,009...19,923,617
Ensembl chr 1:19,920,009...19,923,617 		JBrowse link
G PLA2G3 phospholipase A2 group III IDA (PMID:18801741) UniProt PMID:18801741 NCBI chr22:31,134,807...31,140,508
Ensembl chr22:31,134,807...31,140,508 		JBrowse link
G PLA2G5 phospholipase A2 group V ISS UniProt GO_REF:0000024 NCBI chr 1:20,028,349...20,091,911
Ensembl chr 1:20,028,179...20,091,911 		JBrowse link
G PLA2G7 phospholipase A2 group VII IDA (PMID:8624782) BHF-UCL PMID:8624782 NCBI chr 6:46,700,558...46,735,836
Ensembl chr 6:46,704,201...46,735,693 		JBrowse link
negative regulation of plasma lipoprotein oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA4 apolipoprotein A4 IDA (PMID:16945374) BHF-UCL PMID:16945374 NCBI chr11:116,820,700...116,823,304
Ensembl chr11:116,820,700...116,823,304 		JBrowse link
G APOM apolipoprotein M IDA (PMID:16682745), (PMID:22204862) BHF-UCL PMID:16682745 PMID:22204862 NCBI chr 6:31,652,404...31,658,210
Ensembl chr 6:31,652,416...31,658,210 		JBrowse link
G PON1 paraoxonase 1 NOT IDA (PMID:15342686) BHF-UCL PMID:15342686 NCBI chr 7:95,297,676...95,324,532
Ensembl chr 7:95,297,676...95,324,532 		JBrowse link
negative regulation of very-low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA1 apolipoprotein A1 IDA (PMID:14967812) BHF-UCL PMID:14967812 NCBI chr11:116,835,751...116,837,950
Ensembl chr11:116,835,751...116,837,622
Ensembl chr11:116,835,751...116,837,622 		JBrowse link
G APOA2 apolipoprotein A2 IDA (PMID:14967812) BHF-UCL PMID:14967812 NCBI chr 1:161,222,292...161,223,628
Ensembl chr 1:161,222,292...161,223,631 		JBrowse link
G APOC3 apolipoprotein C3 IC
IDA		 (PMID:18635818)
(PMID:3973011)		 BHF-UCL PMID:3973011 PMID:18635818 NCBI chr11:116,829,907...116,833,072
Ensembl chr11:116,829,706...116,833,072 		JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 IDA (PMID:27471003) MGI PMID:27471003 NCBI chr12:100,473,866...100,564,414
Ensembl chr12:100,473,708...100,564,414 		JBrowse link
plasma lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTTP microsomal triglyceride transfer protein IMP
IDA		 (PMID:8876250)
(PMID:16478722), (PMID:23475612), (PMID:26224785)		 UniProt PMID:8876250 PMID:16478722 PMID:23475612 PMID:26224785 NCBI chr 4:99,564,130...99,623,997
Ensembl chr 4:99,563,761...99,623,999 		JBrowse link
plasma lipoprotein particle oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLA2G7 phospholipase A2 group VII IDA (PMID:8624782) BHF-UCL PMID:8624782 NCBI chr 6:46,700,558...46,735,836
Ensembl chr 6:46,704,201...46,735,693 		JBrowse link
plasma lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOC1 apolipoprotein C1 IDA (PMID:10978346) BHF-UCL PMID:10978346 NCBI chr19:44,914,325...44,919,346
Ensembl chr19:44,914,247...44,919,349 		JBrowse link
positive regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 ISS UniProt GO_REF:0000024 NCBI chr 9:104,781,006...104,928,232
Ensembl chr 9:104,781,006...104,928,155 		JBrowse link
G NR1H2 nuclear receptor subfamily 1 group H member 2 IEA Ensembl GO_REF:0000107 NCBI chr19:50,376,457...50,383,388
Ensembl chr19:50,329,653...50,383,388 		JBrowse link
positive regulation of very-low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA5 apolipoprotein A5 IDA (PMID:18635818) BHF-UCL PMID:18635818 NCBI chr11:116,789,367...116,792,420
Ensembl chr11:116,789,367...116,792,420 		JBrowse link
G APOC2 apolipoprotein C2 IC (PMID:10727238) BHF-UCL PMID:10727238 NCBI chr19:44,946,051...44,949,565
Ensembl chr19:44,945,971...44,949,566
Ensembl chr19:44,945,971...44,949,566 		JBrowse link
regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 TAS (PMID:24097981) BHF-UCL PMID:24097981 NCBI chr 9:104,781,006...104,928,232
Ensembl chr 9:104,781,006...104,928,155 		JBrowse link
G LCAT lecithin-cholesterol acyltransferase IEA Ensembl GO_REF:0000107 NCBI chr16:67,939,750...67,944,120
Ensembl chr16:67,939,750...67,944,131 		JBrowse link
triglyceride-rich lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA2 apolipoprotein A2 IDA
IBA		 (PMID:14967812)
(PMID:21873635)		 BHF-UCL
GO_Central		 PMID:14967812 PMID:21873635 NCBI chr 1:161,222,292...161,223,628
Ensembl chr 1:161,222,292...161,223,631 		JBrowse link
G APOA5 apolipoprotein A5 IEA Ensembl GO_REF:0000107 NCBI chr11:116,789,367...116,792,420
Ensembl chr11:116,789,367...116,792,420 		JBrowse link
G APOC2 apolipoprotein C2 TAS (PMID:17018885) BHF-UCL PMID:17018885 NCBI chr19:44,946,051...44,949,565
Ensembl chr19:44,945,971...44,949,566
Ensembl chr19:44,945,971...44,949,566 		JBrowse link
very-low-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACSL3 acyl-CoA synthetase long chain family member 3 IMP (PMID:18003621) UniProtKB PMID:18003621 NCBI chr 2:222,861,036...222,944,639
Ensembl chr 2:222,860,942...222,944,639 		JBrowse link
G APOB apolipoprotein B IC
TAS		 (PMID:15308631) BHF-UCL
Reactome		 PMID:15308631 Reactome:R-HSA-8866423 NCBI chr 2:21,001,429...21,044,073
Ensembl chr 2:21,001,429...21,044,073 		JBrowse link
G APOC1 apolipoprotein C1 TAS (PMID:18992221) Reactome PMID:18992221 Reactome:R-HSA-8866423 NCBI chr19:44,914,325...44,919,346
Ensembl chr19:44,914,247...44,919,349 		JBrowse link
G APOC3 apolipoprotein C3 TAS (PMID:18399797) BHF-UCL PMID:18399797 NCBI chr11:116,829,907...116,833,072
Ensembl chr11:116,829,706...116,833,072 		JBrowse link
G APOC4 apolipoprotein C4 TAS Reactome Reactome:R-HSA-8866423 NCBI chr19:44,942,237...44,945,496
Ensembl chr19:44,942,237...44,945,496 		JBrowse link
G ARF1 ADP ribosylation factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:228,082,708...228,099,212
Ensembl chr 1:228,082,660...228,099,212 		JBrowse link
G CES1 carboxylesterase 1 ISO (MGI:4440377|PMID:20197051) MGI PMID:20197051 MGI:4440377 NCBI chr16:55,802,851...55,833,127
Ensembl chr16:55,802,851...55,833,337 		JBrowse link
G DGAT1 diacylglycerol O-acyltransferase 1 IMP (PMID:15308631) BHF-UCL PMID:15308631 NCBI chr 8:144,314,584...144,326,852
Ensembl chr 8:144,314,584...144,326,910 		JBrowse link
G FECH ferrochelatase ISO (MGI:1930023|PMID:11160364) MGI PMID:11160364 MGI:1930023 NCBI chr18:57,544,377...57,586,708
Ensembl chr18:57,544,389...57,586,702
Ensembl chr18:57,544,389...57,586,702 		JBrowse link
G LPCAT3 lysophosphatidylcholine acyltransferase 3 ISS UniProt GO_REF:0000024 NCBI chr12:6,976,185...7,018,508
Ensembl chr12:6,976,185...7,018,477 		JBrowse link
G MFSD2A major facilitator superfamily domain containing 2A ISS ARUK-UCL GO_REF:0000024 NCBI chr 1:39,955,145...39,969,956
Ensembl chr 1:39,955,112...39,969,968 		JBrowse link
G MTTP microsomal triglyceride transfer protein TAS Reactome Reactome:R-HSA-8866423 NCBI chr 4:99,564,130...99,623,997
Ensembl chr 4:99,563,761...99,623,999 		JBrowse link
G P4HB prolyl 4-hydroxylase subunit beta TAS Reactome Reactome:R-HSA-8866423 NCBI chr17:81,843,159...81,860,535
Ensembl chr17:81,843,161...81,860,624 		JBrowse link
G SOAT1 sterol O-acyltransferase 1 IMP (PMID:15308631) BHF-UCL PMID:15308631 NCBI chr 1:179,293,719...179,358,680
Ensembl chr 1:179,293,714...179,358,680 		JBrowse link
G SOAT2 sterol O-acyltransferase 2 IMP (PMID:15308631) BHF-UCL PMID:15308631 NCBI chr12:53,103,486...53,124,535
Ensembl chr12:53,103,486...53,124,535 		JBrowse link
very-low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA1 apolipoprotein A1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:116,835,751...116,837,950
Ensembl chr11:116,835,751...116,837,622
Ensembl chr11:116,835,751...116,837,622 		JBrowse link
G APOA4 apolipoprotein A4 IDA
IBA		 (PMID:2307668)
(PMID:21873635)		 BHF-UCL
GO_Central		 PMID:2307668 PMID:21873635 NCBI chr11:116,820,700...116,823,304
Ensembl chr11:116,820,700...116,823,304 		JBrowse link
G APOA5 apolipoprotein A5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:116,789,367...116,792,420
Ensembl chr11:116,789,367...116,792,420 		JBrowse link
G APOC2 apolipoprotein C2 TAS (PMID:15778093) BHF-UCL PMID:15778093 NCBI chr19:44,946,051...44,949,565
Ensembl chr19:44,945,971...44,949,566
Ensembl chr19:44,945,971...44,949,566 		JBrowse link
G APOE apolipoprotein E IGI
IDA		 (PMID:12401887)
(PMID:15654758)		 BHF-UCL PMID:12401887 PMID:15654758 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393 		JBrowse link
G CETP cholesteryl ester transfer protein IDA
IBA
IEA		 (PMID:24293641), (PMID:2833496)
(PMID:21873635)		 UniProtKB
GO_Central		 PMID:2833496 PMID:21873635 PMID:24293641 GO_REF:0000104 NCBI chr16:56,961,950...56,983,845
Ensembl chr16:56,961,923...56,983,845 		JBrowse link
G LCAT lecithin-cholesterol acyltransferase IDA (PMID:15654758) BHF-UCL PMID:15654758 NCBI chr16:67,939,750...67,944,120
Ensembl chr16:67,939,750...67,944,131 		JBrowse link
G LIPC lipase C, hepatic type IDA (PMID:8640403) BHF-UCL PMID:8640403 NCBI chr15:58,410,457...58,569,844
Ensembl chr15:58,410,569...58,569,844 		JBrowse link
G LPL lipoprotein lipase IDA
ISS		 (PMID:3973011) BHF-UCL PMID:3973011 GO_REF:0000024 NCBI chr 8:19,939,253...19,967,259
Ensembl chr 8:19,901,717...19,967,259 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18677
    multicellular organismal process 8790
      plasma lipoprotein particle organization 55
        plasma lipoprotein particle assembly + 32
        plasma lipoprotein particle disassembly + 0
        plasma lipoprotein particle remodeling + 35
Path 2
Term Annotations click to browse term
  biological_process 18677
    cellular process 17725
      cellular component organization or biogenesis 7174
        cellular component organization 6985
          protein-containing complex subunit organization 2084
            protein-lipid complex subunit organization 59
              plasma lipoprotein particle organization 55
                plasma lipoprotein particle assembly + 32
                plasma lipoprotein particle disassembly + 0
                plasma lipoprotein particle remodeling + 35
paths to the root