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ONTOLOGY REPORT - ANNOTATIONS


Term:plasma lipoprotein particle organization
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Accession:GO:0071827 term browser browse the term
Definition:A protein-lipid complex subunit organization process that results in the formation, disassembly, or alteration of a plasma lipoprotein particle. A plasma lipoprotein particle is a spherical particle with a hydrophobic core of triglycerides and/or cholesterol esters, surrounded by an amphipathic monolayer of phospholipids, cholesterol and apolipoproteins.
Synonyms:exact_synonym: plasma lipoprotein particle organisation


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chylomicron assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LPCAT3 lysophosphatidylcholine acyltransferase 3 ISO (MGI:5780634|PMID:26833026) UniProt PMID:26833026 MGI:5780634 NCBI chr12:7,107,925...7,149,982
Ensembl chr12:7,024,015...7,065,945
JBrowse link
G PLAGL2 PLAG1 like zinc finger 2 ISO (MGI:3771409|PMID:17983586) MGI PMID:17983586 MGI:3771409 NCBI chr20:28,481,605...28,496,903
Ensembl chr20:29,610,196...29,625,442
JBrowse link
chylomicron remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIPC lipase C, hepatic type ISO RGD PMID:7897313 RGD:2308767 NCBI chr15:37,363,507...37,537,723
Ensembl chr15:55,814,017...55,847,005
JBrowse link
G LPL lipoprotein lipase ISO (PMID:11342582) UniProt PMID:11342582 NCBI chr 8:19,164,541...19,193,100
Ensembl chr 8:16,113,415...16,142,966
JBrowse link
high-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 ISO (PMID:10431236), (PMID:14754908), (PMID:17305370) BHF-UCL PMID:10431236 PMID:14754908 PMID:17305370 NCBI chr 9:75,948,831...76,096,136
Ensembl chr 9:104,076,516...104,224,188
JBrowse link
G ABCA7 ATP binding cassette subfamily A member 7 ISO (PMID:14570867) Alzheimers_University_of_Toronto PMID:14570867 NCBI chr19:62,811...77,897
Ensembl chr19:1,018,095...1,042,104
JBrowse link
G APOA1 apolipoprotein A1 ISO (PMID:190223) BHF-UCL PMID:190223 NCBI chr11:111,673,539...111,675,428
Ensembl chr11:115,606,136...115,608,122
JBrowse link
G APOA2 apolipoprotein A2 ISO (PMID:218942) BHF-UCL PMID:218942 NCBI chr 1:136,634,754...136,636,122
Ensembl chr 1:140,546,591...140,547,959
JBrowse link
G APOE apolipoprotein E ISO (PMID:14754908), (PMID:17305370) UniProt PMID:14754908 PMID:17305370 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490
JBrowse link
G APOM apolipoprotein M ISO (MGI:3575626|PMID:15793583) BHF-UCL PMID:15793583 MGI:3575626 NCBI chr 6:31,313,543...31,319,374
Ensembl chr 6:32,206,514...32,209,249
JBrowse link
high-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA5 ATP binding cassette subfamily A member 5 ISO (MGI:4454250|PMID:20382126) BHF-UCL PMID:20382126 MGI:4454250 NCBI chr17:63,172,670...63,255,587
Ensembl chr17:68,563,702...68,629,791
JBrowse link
G ABCG1 ATP binding cassette subfamily G member 1 ISO (MGI:3852307|PMID:16556852), (MGI:5634884|PMID:21481393) BHF-UCL PMID:16556852 PMID:21481393 MGI:3852307 MGI:5634884 NCBI chr21:28,534,697...28,619,590
Ensembl chr21:41,839,115...41,933,050
JBrowse link
G APOA1 apolipoprotein A1 ISO (PMID:21481393) BHF-UCL PMID:21481393 NCBI chr11:111,673,539...111,675,428
Ensembl chr11:115,606,136...115,608,122
JBrowse link
G APOA2 apolipoprotein A2 ISO (PMID:14967812), (PMID:8106353) BHF-UCL PMID:8106353 PMID:14967812 NCBI chr 1:136,634,754...136,636,122
Ensembl chr 1:140,546,591...140,547,959
JBrowse link
G APOC3 apolipoprotein C3 ISO (PMID:17438339) BHF-UCL PMID:17438339 NCBI chr11:111,667,816...111,670,861
Ensembl chr11:115,600,416...115,603,460
JBrowse link
G APOE apolipoprotein E ISO (PMID:12401887) BHF-UCL PMID:12401887 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490
JBrowse link
G APOM apolipoprotein M ISO (PMID:18006500)
(MGI:3575626|PMID:15793583)
BHF-UCL PMID:15793583 PMID:18006500 MGI:3575626 NCBI chr 6:31,313,543...31,319,374
Ensembl chr 6:32,206,514...32,209,249
JBrowse link
G CETP cholesteryl ester transfer protein ISO (PMID:2586614)
(PMID:24293641)
BHF-UCL
UniProtKB
PMID:2586614 PMID:24293641 NCBI chr16:37,239,756...37,261,859
Ensembl chr16:56,374,363...56,396,103
JBrowse link
G LCAT lecithin-cholesterol acyltransferase ISO (PMID:10722751), (PMID:12167653), (PMID:15210842), (PMID:4335615) UniProtKB PMID:4335615 PMID:10722751 PMID:12167653 PMID:15210842 NCBI chr16:48,278,137...48,285,305
Ensembl chr16:67,668,646...67,673,127
JBrowse link
G LIPC lipase C, hepatic type ISO (PMID:3244012) RGD
BHF-UCL
PMID:3244012 PMID:8157689 RGD:2308770 NCBI chr15:37,363,507...37,537,723
Ensembl chr15:55,814,017...55,847,005
JBrowse link
G LIPG lipase G, endothelial type ISO (PMID:19136670) BHF-UCL PMID:19136670 NCBI chr18:42,942,132...42,972,112
Ensembl chr18:46,292,154...46,320,652
JBrowse link
G PLA2G3 phospholipase A2 group III ISO (PMID:18801741) UniProt PMID:18801741 NCBI chr22:12,158,589...12,164,441
Ensembl chr22:29,995,364...30,001,160
JBrowse link
G PLTP phospholipid transfer protein ISO (PMID:24369175), (PMID:29883800), (PMID:9132017) AgBase PMID:9132017 PMID:24369175 PMID:29883800 NCBI chr20:42,237,434...42,251,189
Ensembl chr20:43,324,609...43,337,999
JBrowse link
G SCARB1 scavenger receptor class B member 1 ISO (MGI:3056693|PMID:15210842), (MGI:5634884|PMID:21481393) BHF-UCL PMID:15210842 PMID:21481393 MGI:3056693 MGI:5634884 NCBI chr12:122,293,803...122,455,314
Ensembl chr12:126,659,532...126,694,767
JBrowse link
low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCG1 ATP binding cassette subfamily G member 1 ISO (MGI:3852307|PMID:16556852) BHF-UCL PMID:16556852 MGI:3852307 NCBI chr21:28,534,697...28,619,590
Ensembl chr21:41,839,115...41,933,050
JBrowse link
G APOA2 apolipoprotein A2 ISO (PMID:8106353) BHF-UCL PMID:8106353 NCBI chr 1:136,634,754...136,636,122
Ensembl chr 1:140,546,591...140,547,959
JBrowse link
G APOB apolipoprotein B ISO (PMID:15797858) BHF-UCL PMID:15797858 NCBI chr2A:20,986,464...21,029,004
Ensembl chr2A:21,100,356...21,145,129
JBrowse link
G APOE apolipoprotein E ISO (MGI:3850619|PMID:15654758) BHF-UCL PMID:15654758 MGI:3850619 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490
JBrowse link
G CETP cholesteryl ester transfer protein ISO (PMID:2833496) BHF-UCL PMID:2833496 NCBI chr16:37,239,756...37,261,859
Ensembl chr16:56,374,363...56,396,103
JBrowse link
G LIPC lipase C, hepatic type ISO PMID:9685400
(PMID:3244012)
BHF-UCL
RGD
PMID:3244012 PMID:8071607 PMID:9685400 RGD:2308763 RGD:2308769 NCBI chr15:37,363,507...37,537,723
Ensembl chr15:55,814,017...55,847,005
JBrowse link
G MPO myeloperoxidase ISO (PMID:10772654) BHF-UCL PMID:10772654 NCBI chr17:52,333,882...52,357,838
Ensembl chr17:57,201,073...57,212,111
JBrowse link
G MTTP microsomal triglyceride transfer protein ISO (MGI:6095248|PMID:27471003) MGI PMID:27471003 MGI:6095248 NCBI chr 4:91,987,756...92,047,127
Ensembl chr 4:102,648,793...102,708,107
JBrowse link
G PLA2G10 phospholipase A2 group X ISO (PMID:12021277) UniProt PMID:12021277 NCBI chr16:13,600,152...13,622,629 JBrowse link
G PLA2G12B phospholipase A2 group XIIB ISO (MGI:6095248|PMID:27471003) MGI PMID:27471003 MGI:6095248 NCBI chr10:69,482,065...69,502,398
Ensembl chr10:71,946,506...71,965,482
JBrowse link
G PLA2G2E phospholipase A2 group IIE ISO (MGI:5605113|PMID:24910243) MGI PMID:24910243 MGI:5605113 NCBI chr 1:18,874,301...18,878,218
Ensembl chr 1:19,918,391...19,921,639
JBrowse link
G PLA2G3 phospholipase A2 group III ISO (PMID:18801741) UniProt PMID:18801741 NCBI chr22:12,158,589...12,164,441
Ensembl chr22:29,995,364...30,001,160
JBrowse link
G PLA2G5 phospholipase A2 group V ISO (MGI:6393145|PMID:14962950)
(MGI:5605113|PMID:24910243)
UniProt
MGI
PMID:14962950 PMID:24910243 MGI:5605113 MGI:6393145 NCBI chr 1:18,983,104...19,046,834
Ensembl chr 1:20,068,110...20,089,840
JBrowse link
G PLA2G7 phospholipase A2 group VII ISO (PMID:8624782) BHF-UCL PMID:8624782 NCBI chr 6:46,264,262...46,318,487
Ensembl chr 6:47,558,861...47,590,212
JBrowse link
negative regulation of plasma lipoprotein oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA4 apolipoprotein A4 ISO (PMID:16945374) BHF-UCL PMID:16945374 NCBI chr11:111,659,186...111,661,790
Ensembl chr11:115,591,788...115,594,382
JBrowse link
G APOM apolipoprotein M ISO (PMID:16682745), (PMID:22204862)
(MGI:5427066|PMID:22204862)
BHF-UCL PMID:16682745 PMID:22204862 MGI:5427066 NCBI chr 6:31,313,543...31,319,374
Ensembl chr 6:32,206,514...32,209,249
JBrowse link
G PON1 paraoxonase 1 NOT ISO (PMID:15342686) BHF-UCL PMID:15342686 NCBI chr 7:87,253,476...87,279,650
Ensembl chr 7:100,841,286...100,867,493
JBrowse link
negative regulation of very-low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA1 apolipoprotein A1 ISO (PMID:14967812) BHF-UCL PMID:14967812 NCBI chr11:111,673,539...111,675,428
Ensembl chr11:115,606,136...115,608,122
JBrowse link
G APOA2 apolipoprotein A2 ISO (PMID:14967812) BHF-UCL PMID:14967812 NCBI chr 1:136,634,754...136,636,122
Ensembl chr 1:140,546,591...140,547,959
JBrowse link
G APOC3 apolipoprotein C3 ISO (PMID:3973011) BHF-UCL PMID:3973011 NCBI chr11:111,667,816...111,670,861
Ensembl chr11:115,600,416...115,603,460
JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 ISO (PMID:27471003)
(MGI:6095248|PMID:27471003)
MGI PMID:27471003 MGI:6095248 NCBI chr12:98,052,778...98,144,085
Ensembl chr12:101,457,885...101,548,058
JBrowse link
plasma lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTTP microsomal triglyceride transfer protein ISO (PMID:8876250)
(PMID:16478722), (PMID:23475612), (PMID:26224785)
UniProt PMID:8876250 PMID:16478722 PMID:23475612 PMID:26224785 NCBI chr 4:91,987,756...92,047,127
Ensembl chr 4:102,648,793...102,708,107
JBrowse link
plasma lipoprotein particle oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLA2G7 phospholipase A2 group VII ISO (PMID:8624782) BHF-UCL PMID:8624782 NCBI chr 6:46,264,262...46,318,487
Ensembl chr 6:47,558,861...47,590,212
JBrowse link
plasma lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOC1 apolipoprotein C1 ISO (PMID:10978346) BHF-UCL PMID:10978346 NCBI chr19:41,862,168...41,878,231 JBrowse link
positive regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 ISO (MGI:5427333|PMID:22179027) UniProt PMID:22179027 MGI:5427333 NCBI chr 9:75,948,831...76,096,136
Ensembl chr 9:104,076,516...104,224,188
JBrowse link
G NR1H2 nuclear receptor subfamily 1 group H member 2 ISO (MGI:3720271|PMID:17657314), (MGI:3794353|PMID:16825483) BHF-UCL PMID:16825483 PMID:17657314 MGI:3720271 MGI:3794353 NCBI chr19:47,340,077...47,346,737
Ensembl chr19:56,243,124...56,250,024
JBrowse link
positive regulation of very-low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA5 apolipoprotein A5 ISO (PMID:18635818) BHF-UCL PMID:18635818 NCBI chr11:111,625,403...111,627,932
Ensembl chr11:115,559,231...115,562,286
JBrowse link
regulation of high-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LCAT lecithin-cholesterol acyltransferase ISO (MGI:3848791|PMID:19065001) UniProt PMID:19065001 MGI:3848791 NCBI chr16:48,278,137...48,285,305
Ensembl chr16:67,668,646...67,673,127
JBrowse link
triglyceride-rich lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA2 apolipoprotein A2 ISO (PMID:14967812) BHF-UCL PMID:14967812 NCBI chr 1:136,634,754...136,636,122
Ensembl chr 1:140,546,591...140,547,959
JBrowse link
G APOA5 apolipoprotein A5 ISO (MGI:3695062|PMID:16166565) MGI PMID:16166565 MGI:3695062 NCBI chr11:111,625,403...111,627,932
Ensembl chr11:115,559,231...115,562,286
JBrowse link
very-low-density lipoprotein particle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACSL3 acyl-CoA synthetase long chain family member 3 ISO (PMID:18003621) UniProtKB PMID:18003621 NCBI chr2B:110,100,210...110,181,277
Ensembl chr2B:228,706,142...228,759,882
JBrowse link
G ARF1 ADP ribosylation factor 1 ISO RGD PMID:15618550 RGD:9684856 NCBI chr 1:203,484,803...203,501,395
Ensembl chr 1:208,695,615...208,712,105
JBrowse link
G DGAT1 diacylglycerol O-acyltransferase 1 ISO (PMID:15308631) BHF-UCL PMID:15308631 NCBI chr 8:141,079,948...141,090,619
Ensembl chr 8:144,064,587...144,080,155
JBrowse link
G FECH ferrochelatase ISO (MGI:1930023|PMID:11160364) MGI PMID:11160364 MGI:1930023 NCBI chr18:50,934,520...50,977,132
Ensembl chr18:54,273,527...54,312,378
JBrowse link
G LPCAT3 lysophosphatidylcholine acyltransferase 3 ISO (MGI:5636535|PMID:25806685) UniProt PMID:25806685 MGI:5636535 NCBI chr12:7,107,925...7,149,982
Ensembl chr12:7,024,015...7,065,945
JBrowse link
G MFSD2A major facilitator superfamily domain containing 2A ISO (MGI:5474727|PMID:23209793) ARUK-UCL PMID:23209793 MGI:5474727 NCBI chr 1:39,244,438...39,259,156
Ensembl chr 1:40,569,706...40,584,438
JBrowse link
G SOAT1 sterol O-acyltransferase 1 ISO (PMID:15308631) BHF-UCL PMID:15308631 NCBI chr 1:154,776,305...154,840,594
Ensembl chr 1:158,464,886...158,524,909
JBrowse link
G SOAT2 sterol O-acyltransferase 2 ISO (PMID:15308631) BHF-UCL PMID:15308631 NCBI chr12:35,632,018...35,653,227
Ensembl chr12:36,413,954...36,434,074
JBrowse link
very-low-density lipoprotein particle remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA4 apolipoprotein A4 ISO (PMID:2307668) BHF-UCL PMID:2307668 NCBI chr11:111,659,186...111,661,790
Ensembl chr11:115,591,788...115,594,382
JBrowse link
G APOE apolipoprotein E ISO (PMID:15654758)
(MGI:3850619|PMID:15654758)
(PMID:12401887)
BHF-UCL PMID:12401887 PMID:15654758 MGI:3850619 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490
JBrowse link
G CETP cholesteryl ester transfer protein ISO (PMID:24293641), (PMID:2833496) UniProtKB PMID:2833496 PMID:24293641 NCBI chr16:37,239,756...37,261,859
Ensembl chr16:56,374,363...56,396,103
JBrowse link
G LCAT lecithin-cholesterol acyltransferase ISO (PMID:15654758) BHF-UCL PMID:15654758 NCBI chr16:48,278,137...48,285,305
Ensembl chr16:67,668,646...67,673,127
JBrowse link
G LIPC lipase C, hepatic type ISO (PMID:8640403) RGD
BHF-UCL
PMID:6791934 PMID:8640403 RGD:2308780 NCBI chr15:37,363,507...37,537,723
Ensembl chr15:55,814,017...55,847,005
JBrowse link
G LPL lipoprotein lipase ISO (PMID:3973011) BHF-UCL PMID:3973011 NCBI chr 8:19,164,541...19,193,100
Ensembl chr 8:16,113,415...16,142,966
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12593
    multicellular organismal process 6479
      plasma lipoprotein particle organization 40
        plasma lipoprotein particle assembly + 18
        plasma lipoprotein particle disassembly + 0
        plasma lipoprotein particle remodeling + 28
Path 2
Term Annotations click to browse term
  biological_process 12593
    cellular process 11710
      cellular component organization or biogenesis 5044
        cellular component organization 4964
          protein-containing complex subunit organization 1256
            protein-lipid complex subunit organization 43
              plasma lipoprotein particle organization 40
                plasma lipoprotein particle assembly + 18
                plasma lipoprotein particle disassembly + 0
                plasma lipoprotein particle remodeling + 28
paths to the root