ONTOLOGY REPORT - ANNOTATIONS
Term: protein-DNA complex subunit organization
Accession: GO:0071824
browse the term
Definition: Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a protein-DNA complex.
Synonyms: exact_synonym: protein-DNA complex subunit organisation
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Cenpp
centromere protein P
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr17:15,013,869...15,189,312
Ensembl chr17:15,014,058...15,189,304
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Hjurp
Holliday junction recognition protein
involved_in
ISO IBA
(PMID:19410544), (PMID:19410545) PMID:21873635
RGD
PMID:19410544 PMID:19410545 PMID:21873635
RGD:13792537
NCBI chr 9:88,853,379...88,867,730
Ensembl chr 9:88,853,386...88,867,728
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Itgb3bp
integrin subunit beta 3 binding protein
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 5:114,460,217...114,525,538
Ensembl chr 5:114,460,221...114,525,704
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Mis18a
MIS18 kinetochore protein A
acts_upstream_of_or_within involved_in
ISO IBA
MGI:5441069 (MGI:5438906|PMID:22516971) PMID:21873635
RGD
PMID:22516971 PMID:21873635
MGI:5438906 , RGD:13792537
NCBI chr11:29,968,030...29,981,058
Ensembl chr11:29,967,701...29,981,062
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Nasp
nuclear autoantigenic sperm protein
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 5:130,057,363...130,083,003
Ensembl chr 5:130,057,363...130,082,928
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Oip5
Opa interacting protein 5
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 3:106,593,746...106,603,281
Ensembl chr 3:106,593,760...106,603,250
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Cenpi
centromere protein I
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr X:97,515,919...97,567,671
Ensembl chr X:97,515,972...97,567,657
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Cenpo
centromere protein O
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 6:27,203,642...27,218,394
Ensembl chr 6:27,188,537...27,218,314
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Cenpv
centromere protein V
involved_in
ISO
(PMID:18772885)
RGD
PMID:18772885
NCBI chr10:47,214,479...47,228,552
Ensembl chr10:47,214,490...47,228,761
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Dmc1
DNA meiotic recombinase 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 7:111,124,888...111,167,465
Ensembl chr 7:111,124,888...111,167,952
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Rad51
RAD51 recombinase
involved_in
ISO IBA
(PMID:26681308) PMID:21873635
RGD
PMID:26681308 PMID:21873635
RGD:13792537
NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035
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Rad52
RAD52 homolog, DNA repair protein
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 4:153,106,062...153,128,598
Ensembl chr 4:153,106,062...153,128,207
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Cdt1
chromatin licensing and DNA replication factor 1
involved_in
IBA ISO
PMID:21873635 (PMID:11125146)
RGD
PMID:11125146 PMID:21873635
RGD:13792537
NCBI chr19:50,620,713...50,625,659
Ensembl chr19:50,620,713...50,625,659
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Gmnn
geminin, DNA replication inhibitor
involved_in
ISO
(PMID:11125146)
RGD
PMID:11125146
NCBI chr17:40,301,771...40,310,054
Ensembl chr17:40,301,808...40,310,054
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Taf8
TATA-box binding protein associated factor 8
acts_upstream_of_or_within
ISO
(PMID:14580349)
RGD
PMID:14580349
NCBI chr 9:13,491,892...13,511,713
Ensembl chr 9:13,491,937...13,511,717
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Anp32e
acidic nuclear phosphoprotein 32 family member E
involved_in
ISO IBA
(PMID:24463511) PMID:21873635
RGD
PMID:24463511 PMID:21873635
RGD:13792537
NCBI chr 2:183,472,600...183,489,057
Ensembl chr 2:183,472,609...183,489,054
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Dmap1
DNA methyltransferase 1-associated protein 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 5:131,143,726...131,151,760
Ensembl chr 5:131,143,729...131,151,742
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Nasp
nuclear autoantigenic sperm protein
involved_in
ISS ISO
GO_REF:0000024 (MGI:3693383|PMID:12509435)
UniProt RGD
PMID:12509435
GO_REF:0000024 MGI:3693383
NCBI chr 5:130,057,363...130,083,003
Ensembl chr 5:130,057,363...130,082,928
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Ptma
prothymosin alpha
acts_upstream_of_or_within
ISO
(MGI:4457993|PMID:20434447)
RGD
PMID:20434447
MGI:4457993
NCBI chr 9:87,176,251...87,180,333
Ensembl chr 9:87,176,230...87,180,333
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Rnf8
ring finger protein 8
involved_in
ISS ISO
GO_REF:0000024 (MGI:4441228|PMID:20153262)
UniProt RGD
PMID:20153262
GO_REF:0000024 MGI:4441228
NCBI chr20:7,682,258...7,710,448
Ensembl chr20:7,682,322...7,708,491
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Spty2d1
SPT2 chromatin protein domain containing 1
involved_in
ISO
(PMID:26109053)
RGD
PMID:26109053
NCBI chr 1:97,531,495...97,549,633
Ensembl chr 1:97,531,508...97,549,581
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Srcap
Snf2-related CREBBP activator protein
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 1:182,123,562...182,172,643
Ensembl chr 1:182,118,416...182,176,610
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Vps72
vacuolar protein sorting 72 homolog
involved_in
ISO IBA
UniProtKB:P06899|UniProtKB:P0C0S5 (PMID:26974126) PMID:21873635
RGD
PMID:26974126 PMID:21873635
RGD:13792537
NCBI chr 2:182,678,594...182,690,185
Ensembl chr 2:182,678,609...182,690,182
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Znhit1
zinc finger, HIT-type containing 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr12:19,686,606...19,692,880
Ensembl chr12:19,686,148...19,692,880
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Cenpa
centromere protein A
involved_in
ISO
(PMID:11682612)
RGD
PMID:11682612
NCBI chr 6:25,700,142...25,711,767
Ensembl chr 6:25,700,142...25,711,675
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Cenpc
centromere protein C
involved_in
ISO IBA
(PMID:21529714) PMID:21873635
RGD
PMID:21529714 PMID:21873635
RGD:13792537
NCBI chr14:21,988,067...22,046,732
Ensembl chr14:21,988,144...22,055,476
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Cenpe
centromere protein E
involved_in
ISO
(PMID:9763420)
RGD
PMID:9763420
NCBI chr 2:223,637,035...223,695,692
Ensembl chr 2:223,636,998...223,695,669
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Cenph
centromere protein H
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 2:31,894,253...31,910,182
Ensembl chr 2:31,894,667...31,910,154
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Cenpk
centromere protein K
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 2:35,360,132...35,421,372
Ensembl chr 2:35,360,132...35,385,706
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Cenpn
centromere protein N
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr19:44,971,265...44,994,019
Ensembl chr19:44,968,308...44,994,012
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Cenpt
centromere protein T
involved_in
ISO ISS
(PMID:21529714) GO_REF:0000024
RGD UniProt
PMID:21529714
GO_REF:0000024
NCBI chr19:33,734,684...33,741,159
Ensembl chr19:33,734,685...33,741,142
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Cenpw
centromere protein W
involved_in
ISS IBA ISO
GO_REF:0000024 PMID:21873635 (PMID:21695110)
UniProt RGD
PMID:21695110 PMID:21873635
GO_REF:0000024, RGD:13792537
NCBI chr 1:27,525,324...27,530,464
Ensembl chr 1:27,525,324...27,530,464
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Dlgap5
DLG associated protein 5
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr15:20,633,964...20,664,569
Ensembl chr15:20,633,966...20,664,518
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Mis12
MIS12 kinetochore complex component
involved_in
IBA ISO
PMID:21873635 (PMID:16585270)
RGD
PMID:16585270 PMID:21873635
RGD:13792537
NCBI chr10:55,739,590...55,747,915
Ensembl chr10:55,739,564...55,751,068
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Pogz
pogo transposable element derived with ZNF domain
involved_in
ISO
(PMID:20562864)
RGD
PMID:20562864
NCBI chr 2:182,394,269...182,440,711
Ensembl chr 2:182,380,768...182,440,707
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Mcmdc2
minichromosome maintenance domain containing 2
acts_upstream_of_or_within
ISO
MGI:2178050|MGI:5511194 (MGI:5805564|PMID:27760146)
RGD
PMID:27760146
MGI:5805564
NCBI chr 5:9,291,967...9,337,526
Ensembl chr 5:9,298,101...9,338,300
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Rad51c
RAD51 paralog C
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr10:72,205,032...72,231,643
Ensembl chr10:72,205,032...72,231,248
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Mcmdc2
minichromosome maintenance domain containing 2
acts_upstream_of_or_within
ISO
MGI:2178050|MGI:5511194 (MGI:5805564|PMID:27760146)
RGD
PMID:27760146
MGI:5805564
NCBI chr 5:9,291,967...9,337,526
Ensembl chr 5:9,298,101...9,338,300
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Cdc45
cell division cycle 45
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr11:82,185,427...82,210,630
Ensembl chr11:82,185,473...82,210,619
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Hmgb1
high mobility group box 1
involved_in
ISO
(PMID:8006019)
RGD
PMID:8006019
NCBI chr12:5,973,062...5,978,565
Ensembl chr12:5,901,586...5,978,565
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Thra
thyroid hormone receptor alpha
involved_in
ISO IEA
(PMID:8524305) GO_REF:0000107
RGD Ensembl
PMID:8524305
GO_REF:0000107
NCBI chr10:83,701,885...83,729,408
Ensembl chr10:83,700,755...83,729,936
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Zfp827
zinc finger protein 827
involved_in
ISO
(PMID:25150861)
RGD
PMID:25150861
NCBI chr19:28,720,568...28,887,381
Ensembl chr19:28,721,021...28,887,191
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AABR07040686.1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
Ensembl chr X:100,270,675...100,270,878
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Anp32b
acidic nuclear phosphoprotein 32 family member B
involved_in
ISO
(PMID:20538007)
RGD
PMID:20538007
NCBI chr 5:60,743,077...60,765,726
Ensembl chr 5:60,743,443...60,765,717
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Asf1a
anti-silencing function 1A histone chaperone
acts_upstream_of_or_within
ISO
(PMID:11897662)
RGD
PMID:11897662
NCBI chr20:32,893,962...32,908,808
Ensembl chr20:32,893,573...32,908,808
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Asf1b
anti-silencing function 1B histone chaperone
acts_upstream_of_or_within
ISO
(MGI:2675150|PMID:12842904)
RGD
PMID:12842904
MGI:2675150
NCBI chr19:24,181,024...24,195,604
Ensembl chr19:24,181,028...24,195,549
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Atrx
ATRX, chromatin remodeler
involved_in
ISO ISS
(PMID:20651253) GO_REF:0000024
RGD UniProt
PMID:20651253
GO_REF:0000024
NCBI chr X:70,850,981...70,997,330
Ensembl chr X:70,850,981...70,997,330
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Baz1a
bromodomain adjacent to zinc finger domain, 1A
involved_in
ISO
(PMID:14759371)
RGD
PMID:14759371
NCBI chr 6:72,389,701...72,512,516
Ensembl chr 6:72,389,703...72,512,459
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Brd2
bromodomain containing 2
involved_in
ISO ISS
(PMID:18406326) GO_REF:0000024
RGD UniProt
PMID:18406326
GO_REF:0000024
NCBI chr20:4,727,078...4,735,389
Ensembl chr20:4,728,151...4,735,388
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Chaf1a
chromatin assembly factor 1 subunit A
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 9:873,953...900,701
Ensembl chr 9:874,051...900,654
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Chaf1b
chromatin assembly factor 1 subunit B
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr11:33,200,894...33,221,076
Ensembl chr11:33,200,981...33,221,070
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Chrac1
chromatin accessibility complex subunit 1
involved_in
ISO
(PMID:14759371)
RGD
PMID:14759371
NCBI chr 7:105,013,047...105,016,435
Ensembl chr 7:105,013,015...105,017,136
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Daxx
death-domain associated protein
involved_in
ISO IBA
(PMID:20504901), (PMID:20651253) (MGI:5567907|PMID:20651253) PMID:21873635
RGD
PMID:20504901 PMID:20651253 PMID:21873635
MGI:5567907 , RGD:13792537
NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
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Dnajc9
DnaJ heat shock protein family (Hsp40) member C9
involved_in
ISO
(PMID:33857403)
RGD
PMID:33857403
NCBI chr15:3,923,842...3,928,118
Ensembl chr15:3,923,268...3,928,118
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Grwd1
glutamate-rich WD repeat containing 1
involved_in
ISO ISS IEA
(PMID:25990725), (PMID:27552915) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:25990725 PMID:27552915
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:96,301,260...96,306,962
Ensembl chr 1:96,301,261...96,307,201
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H1f0
H1.0 linker histone
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 7:110,592,834...110,594,694
Ensembl chr 7:110,592,208...110,594,694
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H1f1
H1.1 linker histone, cluster member
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr17:41,366,268...41,367,011
Ensembl chr17:41,366,268...41,367,011
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H1f10
H1.10 linker histone
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 4:120,440,515...120,444,705
Ensembl chr 4:120,440,870...120,441,448
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H1f2
H1.2 linker histone, cluster member
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr17:41,391,106...41,392,611
Ensembl chr17:41,388,477...41,392,635
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H1f4
H1.4 linker histone, cluster member
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr17:41,486,634...41,487,293
Ensembl chr17:41,486,560...41,487,403
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H1f5
H1.5 linker histone, cluster member
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr17:42,726,189...42,726,857
Ensembl chr17:42,726,127...42,769,160
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H1f6
H1.6 linker histone, cluster member
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr17:41,427,365...41,428,109
Ensembl chr17:41,427,323...41,428,119
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H1f8
H1.8 linker histone
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 4:148,993,133...148,998,254
Ensembl chr 4:148,993,133...148,998,254
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H2ab3
H2A.B variant histone 3
involved_in
ISO
(PMID:22795134)
RGD
PMID:22795134
NCBI chr X:82,362,633...82,362,983
Ensembl chr X:82,362,633...82,362,983
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H2bc1
H2B clustered histone 1
involved_in acts_upstream_of_or_within
ISS ISO IBA
GO_REF:0000024 (MGI:3702345|PMID:17261847) (MGI:5502464|PMID:23884607) (PMID:24699735) PMID:21873635
UniProt RGD
PMID:17261847 PMID:23884607 PMID:24699735 PMID:21873635
GO_REF:0000024 MGI:3702345 MGI:5502464 , RGD:13792537
NCBI chr17:41,172,041...41,172,510
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H2bc12
H2B clustered histone 12
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr17:42,485,746...42,486,126
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H2bu1
H2B.U histone 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr10:43,732,737...43,733,484
Ensembl chr10:43,732,864...43,736,277
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H3c1
H3 clustered histone 1
involved_in
ISO
(PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412)
RGD
PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412
NCBI chr17:41,367,824...41,368,902
Ensembl chr17:41,368,386...41,368,856
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H3c13
H3 clustered histone 13
involved_in
ISO
(PMID:21636898), (PMID:25615412)
RGD
PMID:21636898 PMID:25615412
NCBI chr17:41,529,860...41,532,577
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H3f3a
H3.3 histone A
involved_in
ISO
(PMID:21636898), (PMID:25615412)
RGD
PMID:21636898 PMID:25615412
NCBI chr13:92,533,294...92,544,903
Ensembl chr13:92,533,298...92,544,908
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H3f3b
H3.3 histone B
involved_in
ISO
(PMID:21636898), (PMID:25615412)
RGD
PMID:21636898 PMID:25615412
NCBI chr10:101,256,488...101,258,712
Ensembl chr10:101,256,480...101,258,709
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H3f4
H3.4 histone
involved_in
ISO
(PMID:20498094), (PMID:25615412)
RGD
PMID:20498094 PMID:25615412
NCBI chr10:43,740,797...43,741,207
G
H4c3
H4 clustered histone 3
involved_in
ISO
(PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412)
RGD
PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412
G
H4f16
H4 histone 16
involved_in
ISO
(PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412)
RGD
PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412
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H4f3
H1.3 linker histone, cluster member
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr17:41,528,576...41,554,586
Ensembl chr17:41,529,667...41,552,334
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Hils1
histone linker H1 domain, spermatid-specific 1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr10:79,913,525...79,914,321
Ensembl chr10:79,913,480...79,914,321
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Hist1h2ail1
histone cluster 1 H2a family member I like 1
involved_in
ISO
(PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412)
RGD
PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412
NCBI chr17:41,568,666...41,569,076
Ensembl chr17:41,568,471...41,569,109
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Hist1h2ao
histone cluster 1, H2ao
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr17:42,704,740...42,705,130
Ensembl chr 2:183,825,994...183,832,048
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Hist1h2bg
histone cluster 1, H2bg
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr17:41,571,278...41,571,658
Ensembl chr17:41,571,210...41,571,896
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Hist1h2bo
histone cluster 1 H2B family member o
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr17:42,716,433...42,718,046
Ensembl chr17:42,673,067...42,718,095
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Hist1h3b
histone cluster 1, H3b
involved_in
ISO
(PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412)
RGD
PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412
NCBI chr17:42,722,805...42,723,925
Ensembl chr17:42,723,450...42,723,911
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Hist1h4b
histone cluster 1 H4 family member B
involved_in
IBA ISO
PMID:21873635 (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412)
RGD
PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 PMID:21873635
RGD:13792537
NCBI chr17:42,480,467...42,484,912
Ensembl chr17:42,480,313...42,485,370
G
Hist1h4m
histone cluster 1, H4m
involved_in
IBA ISO
PMID:21873635 (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412)
RGD
PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 PMID:21873635
RGD:13792537
NCBI chr17:42,698,054...42,698,365
Ensembl chr17:42,698,025...42,698,958
G
Hist2h3c2
histone cluster 2 H3 family member C2
involved_in
ISO
(PMID:21636898), (PMID:25615412)
RGD
PMID:21636898 PMID:25615412
NCBI chr 2:183,837,311...183,837,721
Ensembl chr 2:183,837,303...183,837,752
G
Hist2h4
histone cluster 2, H4
involved_in
IBA ISO
PMID:21873635 (PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412)
RGD
PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412 PMID:21873635
RGD:13792537
NCBI chr 2:183,831,601...183,831,996
Ensembl chr 2:183,825,994...183,832,048
G
Hist2h4a
histone cluster 2 H4 family member A
involved_in
ISO
(PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412)
RGD
PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412
G
Hist3h2ba
histone cluster 3, H2ba
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr10:43,725,836...43,726,465
Ensembl chr10:43,724,930...43,727,107
G
Hmgb1
high mobility group box 1
involved_in
ISO
(PMID:2465778)
RGD
PMID:2465778
NCBI chr12:5,973,062...5,978,565
Ensembl chr12:5,901,586...5,978,565
G
Hmgb2
high mobility group box 2
involved_in
ISO
(PMID:2465778)
RGD
PMID:2465778
NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140
G
Hp1bp3
heterochromatin protein 1, binding protein 3
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 5:150,435,781...150,463,004
Ensembl chr 5:150,433,740...150,463,000
G
Kat6a
lysine acetyltransferase 6A
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr16:69,084,914...69,165,923
Ensembl chr16:69,084,914...69,163,606
G
Kat6b
lysine acetyltransferase 6B
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr15:2,638,885...2,811,977
Ensembl chr15:2,639,200...2,812,316
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LOC100912290
histone H4-like
involved_in
ISO
(PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412)
RGD
PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412
G
LOC102548682
histone H4-like
involved_in
ISO
(PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412)
RGD
PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412
NCBI chr17:41,368,743...41,426,735
G
LOC102551184
histone H4-like
involved_in
ISO
(PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412)
RGD
PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412
NCBI chr17:41,526,192...41,575,488
G
LOC317165
similar to Set alpha isoform
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr18:39,589,341...39,596,429
Ensembl chr18:39,589,341...39,596,429
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LOC499544
LRRGT00154
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 2:60,977,315...61,004,442
Ensembl chr 2:60,977,315...61,004,442
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LOC499843
LRRGT00091
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 3:87,462,365...87,492,138
Ensembl chr 3:87,462,365...87,492,138
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LOC500948
LRRGT00073
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 8:14,286,270...14,309,443
Ensembl chr 8:14,286,270...14,309,443
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LOC684444
similar to HIStone family member (his-41)
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 2:30,387,094...30,387,613
Ensembl chr 2:30,386,982...30,387,633
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LOC684819
similar to H3 histone, family 2 isoform 2
involved_in
ISO
(PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412)
RGD
PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412
G
LOC684841
similar to CG31613-PA
involved_in
ISO
(PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412)
RGD
PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412
G
LOC690126
hypothetical protein LOC690126
involved_in
ISO
(PMID:21636898), (PMID:25615412)
RGD
PMID:21636898 PMID:25615412
NCBI chr 2:183,797,721...183,800,653
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Macroh2a1
macroH2A.1 histone
involved_in
IEA
GO_REF:0000104 GO_REF:0000002
UniProt InterPro
GO_REF:0000002 GO_REF:0000104
NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072
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Macroh2a2
macroH2A.2 histone
involved_in
IEA
GO_REF:0000104
UniProt
GO_REF:0000104
NCBI chr20:29,678,194...29,727,867
Ensembl chr20:29,678,222...29,727,891
G
Mcm2
minichromosome maintenance complex component 2
acts_upstream_of_or_within
ISO
(MGI:2156014|PMID:10531422)
RGD
PMID:10531422
MGI:2156014
NCBI chr 4:121,346,434...121,360,962
Ensembl chr 4:121,346,434...121,360,847
G
Naa60
N(alpha)-acetyltransferase 60, NatF catalytic subunit
involved_in
ISS ISO
GO_REF:0000024 (PMID:21981917)
UniProt RGD
PMID:21981917
GO_REF:0000024
NCBI chr10:11,622,554...11,653,078
Ensembl chr10:11,587,916...11,642,755
G
Nap1l1
nucleosome assembly protein 1-like 1
involved_in
IEA IBA
GO_REF:0000002 PMID:21873635
InterPro
PMID:21873635
GO_REF:0000002, RGD:13792537
NCBI chr 7:46,933,278...46,957,853
Ensembl chr 7:46,933,356...46,956,593
G
Nap1l2
nucleosome assembly protein 1-like 2
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr X:68,174,051...68,176,449
Ensembl chr X:68,173,987...68,176,666
G
Nap1l3
nucleosome assembly protein 1-like 3
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr X:88,347,595...88,350,393
Ensembl chr X:88,347,598...88,350,393
G
Nap1l4
nucleosome assembly protein 1-like 4
involved_in
ISO IBA IEA ISS
(PMID:9325046) PMID:21873635 GO_REF:0000107 (MGI:5897488|PMID:28366643) GO_REF:0000024
RGD Ensembl UniProt
PMID:9325046 PMID:28366643 PMID:21873635
GO_REF:0000024 GO_REF:0000107 MGI:5897488 , RGD:13792537
NCBI chr 1:198,709,697...198,746,093
Ensembl chr 1:198,709,701...198,746,020
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Nap1l5
nucleosome assembly protein 1-like 5
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 4:88,022,670...88,024,988
Ensembl chr 4:88,022,569...88,024,654
G
Nasp
nuclear autoantigenic sperm protein
involved_in
ISO
(PMID:25615412)
RGD
PMID:25615412
NCBI chr 5:130,057,363...130,083,003
Ensembl chr 5:130,057,363...130,082,928
G
Npm1
nucleophosmin 1
involved_in
ISO
(PMID:11602260)
RGD
PMID:11602260
NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
G
Padi4
peptidyl arginine deiminase 4
involved_in
ISS ISO
GO_REF:0000024 (MGI:5545819|PMID:24463520)
UniProt RGD
PMID:24463520
GO_REF:0000024 MGI:5545819
NCBI chr 5:153,041,351...153,074,412
Ensembl chr 5:153,041,352...153,074,362
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Pkn3
protein kinase N3
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 3:13,350,082...13,363,572
Ensembl chr 3:13,335,041...13,363,567
G
Pole3
DNA polymerase epsilon 3, accessory subunit
involved_in
ISO
(PMID:14759371)
RGD
PMID:14759371
NCBI chr 5:75,973,941...75,977,175
Ensembl chr 5:75,974,717...75,977,231
G
RGD1560617
hypothetical gene supported by NM_053561; AF062594
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 7:118,084,674...118,085,850
Ensembl chr 7:118,084,696...118,085,850
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RGD1562378
histone H4 variant H4-v.1
involved_in
ISO
(PMID:20498094), (PMID:21636898), (PMID:24699735), (PMID:25615412)
RGD
PMID:20498094 PMID:21636898 PMID:24699735 PMID:25615412
G
RGD1563307
similar to Set beta isoform
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 1:86,449,036...86,453,703
Ensembl chr X:119,908,942...119,909,886 Ensembl chr 1:119,908,942...119,909,886
G
Rsf1
remodeling and spacing factor 1
involved_in
ISO
(PMID:11691835), (PMID:12972596)
RGD
PMID:11691835 PMID:12972596
NCBI chr 1:151,892,055...152,015,089
Ensembl chr 1:151,892,434...152,009,051
G
Sart3
spliceosome associated factor 3, U4/U6 recycling protein
involved_in
ISO
(PMID:24526689)
RGD
PMID:24526689
NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038
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SET
SET nuclear proto-oncogene
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 3:13,334,564...13,345,598
Ensembl chr 3:13,335,041...13,363,567
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Setsip
SET like protein
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr19:53,561,262...53,562,780
Ensembl chr19:53,561,190...53,563,819
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Shprh
SNF2 histone linker PHD RING helicase
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 1:5,528,827...5,602,537
Ensembl chr 1:5,528,888...5,602,527
G
Smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
involved_in
ISO
(PMID:11691835), (PMID:12972596), (PMID:14759371)
RGD
PMID:11691835 PMID:12972596 PMID:14759371
NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
G
Smyd3
SET and MYND domain containing 3
acts_upstream_of_or_within
ISO
(MGI:5500979|PMID:23752591)
RGD
PMID:23752591
MGI:5500979
NCBI chr13:90,709,263...91,266,209
Ensembl chr13:90,709,270...91,266,253
G
Sox9
SRY-box transcription factor 9
involved_in
ISO ISS
(PMID:20484372) GO_REF:0000024
RGD UniProt
PMID:20484372
GO_REF:0000024
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
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Spty2d1
SPT2 chromatin protein domain containing 1
involved_in
ISO
(PMID:23378026)
RGD
PMID:23378026
NCBI chr 1:97,531,495...97,549,633
Ensembl chr 1:97,531,508...97,549,581
G
Tspy1
testis specific protein, Y-linked 1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
G
Tspy26
testis specific protein, Y-linked 26
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 3:141,690,653...141,692,729
Ensembl chr 3:141,689,899...141,692,670
G
Tspyl2
TSPY-like 2
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr X:21,439,478...21,445,208
Ensembl chr X:21,439,478...21,445,089
G
Tspyl4
TSPY-like 4
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr20:38,098,756...38,100,752
Ensembl chr20:38,098,677...38,103,053
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Tspyl5
TSPY-like 5
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 7:64,881,092...64,885,538
Ensembl chr 7:64,884,225...64,885,457
G
Arid1a
AT-rich interaction domain 1A
involved_in
ISO
(PMID:8895581)
RGD
PMID:8895581
NCBI chr 5:145,908,181...145,981,609
Ensembl chr 5:145,908,181...145,985,564
G
Arid2
AT-rich interaction domain 2
involved_in
ISO
(PMID:8895581)
RGD
PMID:8895581
NCBI chr 7:127,447,192...127,565,987
Ensembl chr 7:127,447,278...127,563,512
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Grwd1
glutamate-rich WD repeat containing 1
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:27552915) GO_REF:0000024
Ensembl RGD UniProt
PMID:27552915
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:96,301,260...96,306,962
Ensembl chr 1:96,301,261...96,307,201
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H2bc1
H2B clustered histone 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5502464|PMID:23884607)
UniProt RGD
PMID:23884607
GO_REF:0000024 MGI:5502464
NCBI chr17:41,172,041...41,172,510
G
Hist3h2a
histone cluster 3, H2a
involved_in
ISO
(PMID:22334663)
RGD
PMID:22334663
NCBI chr10:43,733,702...43,735,254
Ensembl chr10:43,733,668...43,744,874
G
Smarca4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
involved_in
IDA IEA ISO
GO_REF:0000107 (PMID:8895581)
Ensembl RGD
PMID:8895581 PMID:9001244
GO_REF:0000107, RGD:634124
NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
G
Smarcb1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
involved_in
ISO
(PMID:8895581)
RGD
PMID:8895581
NCBI chr20:12,741,164...12,763,616
Ensembl chr20:12,741,477...12,763,620
G
Smarcc1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
involved_in
ISO
(PMID:8895581)
RGD
PMID:8895581
NCBI chr 8:110,111,097...110,214,727
Ensembl chr 8:110,111,122...110,214,720
G
Smarcc2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
involved_in
ISO
(PMID:8895581)
RGD
PMID:8895581
NCBI chr 7:881,844...910,090
Ensembl chr 7:881,421...909,978
G
Smarcd1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
involved_in
ISO
(PMID:8895581)
RGD
PMID:8895581
NCBI chr 7:130,829,783...130,840,323
Ensembl chr 7:130,829,768...130,840,323
G
Smarcd2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
involved_in
ISO
(PMID:8895581)
RGD
PMID:8895581
NCBI chr10:91,193,752...91,202,817
Ensembl chr10:91,193,752...91,204,341
G
Smarcd3
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
involved_in
ISO
(PMID:8895581)
RGD
PMID:8895581
NCBI chr 4:10,548,693...10,580,334
Ensembl chr 4:10,548,751...10,580,326
G
Smarce1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
involved_in
ISO IEA
(PMID:8895581) GO_REF:0000107
RGD Ensembl
PMID:8895581
GO_REF:0000107
NCBI chr10:84,159,270...84,180,547
Ensembl chr10:84,159,275...84,179,989
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Ssrp1
structure specific recognition protein 1
involved_in
ISO
(PMID:16902406)
RGD
PMID:16902406
NCBI chr 3:70,124,371...70,134,481
Ensembl chr 3:70,118,655...70,134,482
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Supt16h
SPT16 homolog, facilitates chromatin remodeling subunit
involved_in
ISO
(PMID:16902406)
RGD
PMID:16902406
NCBI chr15:24,867,697...24,904,818
Ensembl chr15:24,866,489...24,904,846
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Tnp1
transition protein 1
involved_in
ISO ISS
(PMID:10781074) GO_REF:0000024
RGD UniProt
PMID:10781074
GO_REF:0000024
NCBI chr 9:74,594,463...74,595,072
Ensembl chr 9:74,594,466...74,595,274
G
Chd1
chromodomain helicase DNA binding protein 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 1:56,661,743...56,729,119
Ensembl chr 1:56,664,054...56,728,125
G
Chd2
chromodomain helicase DNA binding protein 2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 1:127,188,146...127,317,041
Ensembl chr 1:127,190,059...127,300,502
G
Lin54
lin-54 DREAM MuvB core complex component
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:27465258) GO_REF:0000107
RGD Ensembl
PMID:27465258
GO_REF:0000107
NCBI chr14:9,129,775...9,188,244
Ensembl chr14:9,130,336...9,187,790
G
Mcm3ap
minichromosome maintenance complex component 3 associated protein
involved_in
ISO
(PMID:23652018)
RGD
PMID:23652018
NCBI chr20:12,127,570...12,165,165
Ensembl chr20:12,127,570...12,165,165
G
Setd2
SET domain containing 2, histone lysine methyltransferase
involved_in
ISO
(PMID:23325844)
RGD
PMID:23325844
NCBI chr 8:110,511,808...110,597,489
Ensembl chr 8:110,511,772...110,597,489
G
Supt6h
SPT6 homolog, histone chaperone and transcription elongation factor
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr10:63,103,920...63,140,780
Ensembl chr10:63,103,921...63,140,780
G
Gtf2h5
general transcription factor IIH subunit 5
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 MGI:5514340 (MGI:5506835|PMID:23637614)
RGD
PMID:23637614 PMID:21873635
MGI:5506835 , RGD:13792537
NCBI chr 1:46,656,804...46,663,512
Ensembl chr 1:46,656,859...46,664,939
G
LOC120103497
general transcription factor IIH subunit 5-like
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 6:27,109,209...27,114,478
Ensembl chr 6:27,111,331...27,111,546
G
Cenpv
centromere protein V
involved_in
ISO IBA
(PMID:18772885) PMID:21873635
RGD
PMID:18772885 PMID:21873635
RGD:13792537
NCBI chr10:47,214,479...47,228,552
Ensembl chr10:47,214,490...47,228,761
G
Dicer1
dicer 1 ribonuclease III
acts_upstream_of_or_within
ISO
MGI:3589287 (MGI:3528782|PMID:15713842)
RGD
PMID:15713842
MGI:3528782
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
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H3f3a
H3.3 histone A
acts_upstream_of_or_within
ISO
MGI:1101768 (MGI:5694896|PMID:26159997)
RGD
PMID:26159997
MGI:5694896
NCBI chr13:92,533,294...92,544,903
Ensembl chr13:92,533,298...92,544,908
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H3f3b
H3.3 histone B
acts_upstream_of_or_within
ISO
MGI:1097686 (MGI:5694896|PMID:26159997)
RGD
PMID:26159997
MGI:5694896
NCBI chr10:101,256,488...101,258,712
Ensembl chr10:101,256,480...101,258,709
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Hells
helicase, lymphoid specific
involved_in
IBA ISO
PMID:21873635 (MGI:3041983|PMID:14612388)
RGD
PMID:14612388 PMID:21873635
MGI:3041983 , RGD:13792537
NCBI chr 1:236,701,704...236,748,239
Ensembl chr 1:236,701,758...236,746,844
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Sirt6
sirtuin 6
involved_in
ISO
(PMID:27043296)
RGD
PMID:27043296
NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914
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Kat5
lysine acetyltransferase 5
involved_in
ISS ISO
GO_REF:0000024 (MGI:5913510|PMID:28694333)
UniProt RGD
PMID:28694333
GO_REF:0000024 MGI:5913510
NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458
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Ahr
aryl hydrocarbon receptor
acts_upstream_of_or_within
ISO
(MGI:62922|PMID:8215422)
RGD
PMID:8215422
MGI:62922
NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568
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Cand1
cullin-associated and neddylation-dissociated 1
involved_in
IDA
PMID:10567521
UniProt
PMID:10567521
RGD:8553447
NCBI chr 7:54,681,114...54,719,002
Ensembl chr 7:54,680,900...54,718,993
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Creb1
cAMP responsive element binding protein 1
IMP
RGD
PMID:16891311
RGD:1625706
NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
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Esr1
estrogen receptor 1
involved_in
ISO IEA
(PMID:9841876) GO_REF:0000107
RGD Ensembl
PMID:9841876
GO_REF:0000107
NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002
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Ikzf1
IKAROS family zinc finger 1
acts_upstream_of_or_within
ISO
MGI:2158690 (MGI:5317044|PMID:21245044)
RGD
PMID:21245044
MGI:5317044
NCBI chr14:86,255,065...86,340,839
Ensembl chr14:86,255,065...86,342,416
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Psmc6
proteasome 26S subunit, ATPase 6
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr15:18,542,585...18,564,057
Ensembl chr15:18,542,563...18,564,055
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Tp53
tumor protein p53
involved_in
ISO
(PMID:24289924)
RGD
PMID:24289924
NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
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Wnt10b
Wnt family member 10B
acts_upstream_of_or_within
ISO
(MGI:3820325|PMID:19056892)
RGD
PMID:19056892
MGI:3820325
NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892
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Terf1
telomeric repeat binding factor 1
involved_in
ISO
(PMID:24270157)
RGD
PMID:24270157
NCBI chr 5:3,443,103...3,472,377
Ensembl chr 5:3,443,106...3,472,340
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Kntc1
kinetochore associated 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr12:32,769,020...32,839,617
Ensembl chr12:32,769,020...32,839,561
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Ep300
E1A binding protein p300
IDA
p53, CBP, p21/WAF1 promoter
RGD
PMID:9215639
RGD:2312285
NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
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Hey2
hes-related family bHLH transcription factor with YRPW motif 2
acts_upstream_of_or_within
ISO
(MGI:1354027|PMID:10692439), (MGI:3624193|PMID:16603706)
RGD
PMID:10692439 PMID:16603706
MGI:1354027 MGI:3624193
NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
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Hnf1b
HNF1 homeobox B
IMP
RGD
PMID:9545279
RGD:2312721
NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888
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Pias1
protein inhibitor of activated STAT, 1
IMP
RGD
PMID:16135793
RGD:2303115
NCBI chr 8:63,338,150...63,451,670
Ensembl chr 8:63,338,150...63,438,905
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Tcf4
transcription factor 4
involved_in
ISO
(MGI:85411|PMID:8978694)
RGD
PMID:8978694
MGI:85411
NCBI chr18:62,941,739...63,288,126
Ensembl chr18:62,943,782...63,284,425
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Myc
MYC proto-oncogene, bHLH transcription factor
involved_in
ISO
(PMID:19160485)
RGD
PMID:19160485
NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
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Rpl23
ribosomal protein L23
involved_in
ISO
(PMID:19160485)
RGD
PMID:19160485
NCBI chr10:82,771,878...82,775,840
Ensembl chr10:82,771,538...82,775,870
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H3f3b
H3.3 histone B
acts_upstream_of_or_within
ISO
MGI:5474462 (MGI:5474379|PMID:23570311)
RGD
PMID:23570311
MGI:5474379
NCBI chr10:101,256,488...101,258,712
Ensembl chr10:101,256,480...101,258,709
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Rnf4
ring finger protein 4
involved_in
ISO IEA ISS
(PMID:20212317) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:20212317
GO_REF:0000024 GO_REF:0000107
NCBI chr14:76,401,292...76,423,270
Ensembl chr14:76,401,299...76,422,566
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Senp6
SUMO specific peptidase 6
involved_in
IBA ISO
PMID:21873635 (PMID:20212317)
RGD
PMID:20212317 PMID:21873635
RGD:13792537
NCBI chr 8:80,988,675...81,071,606
Ensembl chr 8:80,989,052...81,067,170
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Trappc12
trafficking protein particle complex subunit 12
involved_in
ISO
(PMID:25918224)
RGD
PMID:25918224
NCBI chr 6:45,321,496...45,386,967
Ensembl chr 6:45,321,497...45,386,952
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Atf7ip
activating transcription factor 7 interacting protein
involved_in
ISO
(PMID:12665582)
RGD
PMID:12665582
NCBI chr 4:169,385,872...169,471,652
Ensembl chr 4:169,385,872...169,471,650
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Baz2a
bromodomain adjacent to zinc finger domain, 2A
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr 7:523,204...560,911
Ensembl chr 7:523,265...560,659
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Pih1d1
PIH1 domain containing 1
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr 1:95,639,597...95,645,295
Ensembl chr 1:95,639,592...95,645,290
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Polr1e
RNA polymerase I subunit E
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 (MGI:1928312|PMID:8641287)
RGD
PMID:8641287 PMID:21873635
MGI:1928312 , RGD:13792537
NCBI chr 5:59,279,456...59,295,346
Ensembl chr 5:59,279,460...59,295,369
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Smarca4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
G
Taf1b
TATA-box binding protein associated factor, RNA polymerase I subunit B
involved_in
ISO ISS
(PMID:21921199) GO_REF:0000024
RGD UniProt
PMID:21921199
GO_REF:0000024
NCBI chr 6:41,116,980...41,194,593
Ensembl chr 6:41,117,420...41,194,593
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Taf1c
TATA-box binding protein associated factor, RNA polymerase 1 subunit C
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr19:47,652,451...47,658,971
Ensembl chr19:47,652,452...47,658,971
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Ubtf
upstream binding transcription factor
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr10:87,258,217...87,274,291
Ensembl chr10:87,258,217...87,272,969
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Dr1
down-regulator of transcription 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr14:1,458,223...1,469,578
Ensembl chr14:1,458,223...1,469,638
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Gtf2a2
general transcription factor 2A subunit 2
involved_in
ISO IBA
(PMID:7958899), (PMID:8626665) PMID:21873635
RGD
PMID:7958899 PMID:8626665 PMID:21873635
RGD:13792537
NCBI chr 8:70,662,395...70,675,576
Ensembl chr 8:70,662,428...70,675,569
G
Gtf2b
general transcription factor IIB
involved_in
IEA ISS IBA ISO
GO_REF:0000107 GO_REF:0000024 PMID:21873635 (PMID:3029109), (PMID:8413225), (PMID:9841876)
Ensembl UniProt RGD
PMID:3029109 PMID:8413225 PMID:9841876 PMID:21873635
GO_REF:0000024 GO_REF:0000107, RGD:13792537
NCBI chr 2:231,767,317...231,785,626
Ensembl chr 2:231,767,238...231,785,651
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Gtf2f2
general transcription factor IIF subunit 2
IDA
RGD
PMID:7929273
RGD:9681417
NCBI chr15:51,206,027...51,327,166
Ensembl chr15:51,206,031...51,327,253
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Taf1
TATA-box binding protein associated factor 1
involved_in
ISO
(PMID:27007846)
RGD
PMID:27007846
NCBI chr X:66,640,915...66,716,543
Ensembl chr X:66,640,982...66,716,543
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Taf10
TATA-box binding protein associated factor 10
involved_in
ISO
(PMID:27007846) MGI:3606185 (MGI:5918349|PMID:28893950)
RGD
PMID:27007846 PMID:28893950
MGI:5918349
NCBI chr 1:160,095,108...160,096,401
Ensembl chr 1:160,095,108...160,096,376
G
Taf11
TATA-box binding protein associated factor 11
involved_in
ISO IBA
(PMID:27007846) PMID:21873635
RGD
PMID:27007846 PMID:21873635
RGD:13792537
NCBI chr20:5,955,774...5,963,593
Ensembl chr20:5,955,777...5,961,905
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Taf12
TATA-box binding protein associated factor 12
involved_in
ISO IBA
(PMID:27007846) PMID:21873635
RGD
PMID:27007846 PMID:21873635
RGD:13792537
NCBI chr 5:144,472,816...144,490,299
Ensembl chr 5:144,472,841...144,488,849
G
Taf13
TATA-box binding protein associated factor 13
involved_in
ISO
(PMID:27007846)
RGD
PMID:27007846
NCBI chr 2:196,205,219...196,215,882
Ensembl chr 2:196,205,243...196,215,878
G
Taf2
TATA-box binding protein associated factor 2
involved_in
ISO
(PMID:27007846)
RGD
PMID:27007846
NCBI chr 7:86,422,613...86,479,616
Ensembl chr 7:86,422,613...86,479,616
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Taf3
TATA-box binding protein associated factor 3
involved_in
ISO
(PMID:27007846)
RGD
PMID:27007846
NCBI chr17:68,455,389...68,608,367
Ensembl chr17:68,423,909...68,608,367
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Taf4
TATA-box binding protein associated factor 4
involved_in
ISO
(PMID:27007846)
RGD
PMID:27007846
NCBI chr 3:167,017,992...167,083,413
Ensembl chr 3:167,017,993...167,083,356
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Taf5
TATA-box binding protein associated factor 5
involved_in
ISO
(PMID:27007846)
RGD
PMID:27007846
NCBI chr 1:245,958,428...245,973,914
Ensembl chr 1:245,958,428...245,973,914
G
Taf6
TATA-box binding protein associated factor 6
involved_in
ISO IBA
(PMID:27007846) PMID:21873635
RGD
PMID:27007846 PMID:21873635
RGD:13792537
NCBI chr12:17,055,864...17,064,244
Ensembl chr12:17,055,873...17,064,247
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Taf6l
TATA-box binding protein associated factor 6 like
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 1:205,672,147...205,684,721
Ensembl chr 1:205,672,149...205,684,655
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Taf7
TATA-box binding protein associated factor 7
involved_in
ISO IBA
(PMID:27007846) PMID:21873635
RGD
PMID:27007846 PMID:21873635
RGD:13792537
NCBI chr18:29,459,937...29,462,086
Ensembl chr18:29,452,943...29,462,134
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Taf7l
TATA-box binding protein associated factor 7-like
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr X:97,660,222...97,675,241
Ensembl chr X:97,660,222...97,675,023
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Taf7l-ps1
TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, pseudogene 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 7:51,763,259...51,764,401
Ensembl chr 7:51,763,259...51,764,401
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Taf7l2
TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, pseudogene 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
Ensembl chr 7:51,763,259...51,764,401
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Taf8
TATA-box binding protein associated factor 8
involved_in
ISO
(PMID:27007846)
RGD
PMID:27007846
NCBI chr 9:13,491,892...13,511,713
Ensembl chr 9:13,491,937...13,511,717
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Taf9
TATA-box binding protein associated factor 9
involved_in
ISO IBA IEA
(PMID:27007846) PMID:21873635 GO_REF:0000107
RGD Ensembl
PMID:27007846 PMID:21873635
GO_REF:0000107, RGD:13792537
NCBI chr 2:31,794,316...31,798,324
Ensembl chr 2:31,794,142...31,798,769
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Tbp
TATA box binding protein
involved_in
ISO
(PMID:27007846), (PMID:9841876)
RGD
PMID:9841876 PMID:27007846
NCBI chr 1:56,463,330...56,480,430
Ensembl chr 1:56,463,618...56,510,016
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Bdp1
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 2:31,457,523...31,470,119
Ensembl chr 2:31,378,924...31,470,119
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Brdt
bromodomain testis associated
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:5447877|PMID:22922464) GO_REF:0000024
Ensembl RGD UniProt
PMID:22922464
GO_REF:0000024 GO_REF:0000107 MGI:5447877
NCBI chr14:2,421,094...2,445,842
Ensembl chr14:2,387,796...2,445,842
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Chd5
chromodomain helicase DNA binding protein 5
involved_in
ISS ISO
GO_REF:0000024 (MGI:5559810|PMID:24252660)
UniProt RGD
PMID:24252660
GO_REF:0000024 MGI:5559810
NCBI chr 5:162,848,273...162,898,997
Ensembl chr 5:162,848,394...162,896,291
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Fshr
follicle stimulating hormone receptor
acts_upstream_of_or_within
ISO
MGI:2384087 (MGI:2682484|PMID:14680821)
RGD
PMID:14680821
MGI:2682484
NCBI chr 6:5,198,825...5,406,785
Ensembl chr 6:5,198,825...5,406,785
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H2bc1
H2B clustered histone 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5502464|PMID:23884607)
UniProt RGD
PMID:23884607
GO_REF:0000024 MGI:5502464
NCBI chr17:41,172,041...41,172,510
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Piwil1
piwi-like RNA-mediated gene silencing 1
involved_in
ISO
(MGI:5905675|PMID:28552346)
RGD
PMID:28552346
MGI:5905675
NCBI chr12:27,949,743...27,970,645
Ensembl chr12:27,949,744...27,970,580
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Psme4
proteasome activator subunit 4
involved_in
IBA ISO
PMID:21873635 (MGI:5494329|PMID:23706739)
RGD
PMID:23706739 PMID:21873635
MGI:5494329 , RGD:13792537
NCBI chr14:104,505,716...104,609,410
Ensembl chr14:104,505,716...104,609,408
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Rnf8
ring finger protein 8
involved_in
ISS ISO
GO_REF:0000024 (MGI:5905675|PMID:28552346)
UniProt RGD
PMID:28552346
GO_REF:0000024 MGI:5905675
NCBI chr20:7,682,258...7,710,448
Ensembl chr20:7,682,322...7,708,491
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Sycp3
synaptonemal complex protein 3
involved_in
ISO
(PMID:14643120)
RGD
PMID:14643120
NCBI chr 7:22,874,055...22,888,512
Ensembl chr 7:22,874,055...22,888,511
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Tnp1
transition protein 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3041389|PMID:15083521), (MGI:3056208|PMID:15189834), (MGI:3620321|PMID:15163613), (MGI:5897488|PMID:28366643)
UniProt RGD
PMID:15083521 PMID:15163613 PMID:15189834 PMID:28366643
GO_REF:0000024 MGI:3041389 MGI:3056208 MGI:3620321 MGI:5897488
NCBI chr 9:74,594,463...74,595,072
Ensembl chr 9:74,594,466...74,595,274
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Tnp2
transition protein 2
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:3041389|PMID:15083521), (MGI:3056208|PMID:15189834), (MGI:3620321|PMID:15163613), (MGI:5897488|PMID:28366643) GO_REF:0000107
UniProt RGD Ensembl
PMID:15083521 PMID:15163613 PMID:15189834 PMID:28366643
GO_REF:0000024 GO_REF:0000107 MGI:3041389 MGI:3056208 MGI:3620321 MGI:5897488
NCBI chr10:4,879,812...4,880,540
Ensembl chr10:4,879,812...4,880,538
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Gtf2e1
general transcription factor IIE subunit 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr11:63,182,073...63,215,349
Ensembl chr11:63,182,349...63,213,942
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Brf1
BRF1, RNA polymerase III transcription initiation factor subunit
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 6:132,034,380...132,081,296
Ensembl chr 6:132,037,272...132,081,278
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Brf2
BRF2, RNA polymerase III transcription initiation factor subunit
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr16:64,928,334...64,933,057
Ensembl chr16:64,928,300...64,933,059
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