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Pathways

ONTOLOGY REPORT - ANNOTATIONS


Term:protein-DNA complex organization
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Accession:GO:0071824 term browser browse the term
Definition:Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a protein-DNA complex.
Synonyms:exact_synonym: DNA-protein complex subunit organization;   protein-DNA complex subunit organisation



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CENP-A containing chromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpa centromere protein A involved_in ISO (PMID:11682612) RGD PMID:11682612 NCBI chr 6:25,700,142...25,711,767
Ensembl chr 6:25,700,142...25,711,675
JBrowse link
G Cenpi centromere protein I involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:97,515,919...97,567,671
Ensembl chr  X:97,515,972...97,567,657
JBrowse link
G Cenpn centromere protein N involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:44,971,265...44,994,019
Ensembl chr19:44,968,308...44,994,012
JBrowse link
G Cenpp centromere protein P involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:15,013,869...15,189,312
Ensembl chr17:15,014,058...15,189,304
JBrowse link
G Hjurp Holliday junction recognition protein involved_in ISO
IBA
(PMID:19410544), (PMID:19410545)
PMID:21873635
RGD PMID:19410544 PMID:19410545 PMID:21873635 RGD:13792537 NCBI chr 9:88,853,379...88,867,730
Ensembl chr 9:88,853,386...88,867,728
JBrowse link
G Itgb3bp integrin subunit beta 3 binding protein involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:114,460,217...114,525,538
Ensembl chr 5:114,460,221...114,525,704
JBrowse link
G Mis18a MIS18 kinetochore protein A acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:5441069 (MGI:5438906|PMID:22516971)
PMID:21873635
RGD PMID:22516971 PMID:21873635 MGI:5438906, RGD:13792537 NCBI chr11:29,968,030...29,981,058
Ensembl chr11:29,967,701...29,981,062
JBrowse link
G Nasp nuclear autoantigenic sperm protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:130,057,363...130,083,003
Ensembl chr 5:130,057,363...130,082,928
JBrowse link
G Oip5 Opa interacting protein 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:106,593,746...106,603,281
Ensembl chr 3:106,593,760...106,603,250
JBrowse link
centromere complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpi centromere protein I involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:97,515,919...97,567,671
Ensembl chr  X:97,515,972...97,567,657
JBrowse link
G Cenpo centromere protein O involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:27,203,642...27,218,394
Ensembl chr 6:27,188,537...27,218,314
JBrowse link
G Cenpv centromere protein V involved_in ISO (PMID:18772885) RGD PMID:18772885 NCBI chr10:47,214,479...47,228,552
Ensembl chr10:47,214,490...47,228,761
JBrowse link
chromatin looping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctcf CCCTC-binding factor involved_in ISO
IEA
(PMID:18654629)
GO_REF:0000107
(MGI:3655597|PMID:16951251)
RGD
Ensembl
PMID:16951251 PMID:18654629 GO_REF:0000107 MGI:3655597 NCBI chr19:33,521,726...33,571,124
Ensembl chr19:33,529,319...33,571,123
JBrowse link
G Rad21 RAD21 cohesin complex component acts_upstream_of_or_within ISO (MGI:6446339|PMID:32328639) RGD PMID:32328639 MGI:6446339 NCBI chr 7:83,287,867...83,314,810
Ensembl chr 7:83,287,870...83,314,817
JBrowse link
chromatin organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07053402.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07053884.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 3:126,570,653...126,570,904 JBrowse link
G AABR07062138.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Abraxas1 abraxas 1, BRCA1 A complex subunit involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:8,796,281...8,810,625
Ensembl chr14:8,796,266...8,810,622
JBrowse link
G Anp32e acidic nuclear phosphoprotein 32 family member E involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:183,472,600...183,489,057
Ensembl chr 2:183,472,609...183,489,054
JBrowse link
G Arid1a AT-rich interaction domain 1A acts_upstream_of_or_within ISO PR:Q6DIC0 (MGI:1934781|PMID:11318604) RGD PMID:11318604 MGI:1934781 NCBI chr 5:145,908,181...145,981,609
Ensembl chr 5:145,908,181...145,985,564
JBrowse link
G Arid4a AT-rich interaction domain 4A acts_upstream_of_or_within ISO MGI:2137512|MGI:3687004 (MGI:3686546|PMID:17043311), (MGI:3815238|PMID:18728284) RGD PMID:17043311 PMID:18728284 MGI:3686546 MGI:3815238 NCBI chr 6:89,522,463...89,593,868
Ensembl chr 6:89,522,442...89,593,510
JBrowse link
G Arid4b AT-rich interaction domain 4B acts_upstream_of_or_within ISO MGI:2444354 (MGI:3686546|PMID:17043311) RGD PMID:17043311 MGI:3686546 NCBI chr17:51,138,419...51,262,956
Ensembl chr17:51,138,535...51,262,906
JBrowse link
G Atg5 autophagy related 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5543312|PMID:23863932)
GO_REF:0000107
RGD
Ensembl
PMID:23863932 GO_REF:0000107 MGI:5543312 NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (MGI:5543312|PMID:23863932) RGD PMID:23863932 MGI:5543312 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Atrx ATRX, chromatin remodeler involved_in ISO
ISS
(PMID:22391447)
GO_REF:0000024
RGD
UniProt
PMID:22391447 GO_REF:0000024 NCBI chr  X:70,850,981...70,997,330
Ensembl chr  X:70,850,981...70,997,330
JBrowse link
G Atxn7l3 ataxin 7-like 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:87,242,843...87,250,186
Ensembl chr10:87,243,587...87,250,620
JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 involved_in IEA GO_REF:0000043
GO_REF:0000104
UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 6:24,369,021...24,833,335
Ensembl chr 6:24,369,022...24,833,951
JBrowse link
G Bag6 BAG cochaperone 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:3,675,938...3,690,414
Ensembl chr20:3,675,938...3,688,657
JBrowse link
G Bahcc1 BAH domain and coiled-coil containing 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6505167|PMID:32969152)
GO_REF:0000107
RGD
Ensembl
PMID:32969152 GO_REF:0000107 MGI:6505167 NCBI chr10:105,526,309...105,583,320
Ensembl chr10:105,522,172...105,583,317
JBrowse link
G Banf1 BAF nuclear assembly factor 1 involved_in ISO
ISS
(PMID:28841419)
GO_REF:0000024
RGD
UniProt
PMID:28841419 GO_REF:0000024 NCBI chr 1:202,672,170...202,674,215
Ensembl chr 1:202,671,305...202,674,188
JBrowse link
G Baz1b bromodomain adjacent to zinc finger domain, 1B acts_upstream_of_or_within ISO (MGI:2179578|PMID:11980720) RGD PMID:11980720 MGI:2179578 NCBI chr12:21,431,985...21,489,956
Ensembl chr12:21,431,985...21,490,426
JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within ISO MGI:99161 (MGI:3612587|PMID:16359901), (MGI:3629244|PMID:16687444) RGD PMID:16359901 PMID:16687444 MGI:3612587 MGI:3629244 NCBI chr17:81,332,175...81,341,625
Ensembl chr17:81,332,214...81,388,690
JBrowse link
G Brd2 bromodomain containing 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:4,727,078...4,735,389
Ensembl chr20:4,728,151...4,735,388
JBrowse link
G Cabin1 calcineurin binding protein 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:12,893,314...13,015,357
Ensembl chr20:12,893,358...13,015,357
JBrowse link
G Cbx1 chromobox 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:81,770,307...81,789,981
Ensembl chr10:81,770,342...81,791,096
JBrowse link
G Cbx3 chromobox 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:80,545,450...80,559,284
Ensembl chr 4:80,546,010...80,559,283
JBrowse link
G Cbx5 chromobox 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:134,333,165...134,376,102
Ensembl chr 7:134,331,335...134,375,022
JBrowse link
G Cbx7 chromobox 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:111,460,656...111,479,231
Ensembl chr 7:111,460,656...111,477,973
JBrowse link
G Cdan1 codanin 1 acts_upstream_of_or_within
acts_upstream_of_positive_effect
involved_in
ISO
IBA
(PMID:21364188)
(PMID:22407294)
PMID:21873635
RGD PMID:21364188 PMID:22407294 PMID:21873635 RGD:13792537 NCBI chr 3:107,675,147...107,689,811
Ensembl chr 3:107,673,645...107,689,773
JBrowse link
G Chd3 chromodomain helicase DNA binding protein 3 acts_upstream_of_or_within ISO (MGI:1333986|PMID:10204490) RGD PMID:10204490 MGI:1333986 NCBI chr10:54,063,629...54,090,030
Ensembl chr10:54,063,629...54,090,047
JBrowse link
G Dapk3 death-associated protein kinase 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:8,524,182...8,532,552
Ensembl chr 7:8,524,183...8,532,558
JBrowse link
G Daxx death-domain associated protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
JBrowse link
G Dek DEK proto-oncogene involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:17,580,804...17,602,825
Ensembl chr17:17,580,843...17,602,808
JBrowse link
G Dnajc2 DnaJ heat shock protein family (Hsp40) member C2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:13,270,239...13,297,438
Ensembl chr 4:13,270,191...13,297,431
JBrowse link
G Ehmt1 euchromatic histone lysine methyltransferase 1 involved_in ISO (PMID:12004135) RGD PMID:12004135 NCBI chr 3:7,580,680...7,729,046
Ensembl chr 3:7,580,683...7,729,007
JBrowse link
G ENSRNOG00000064141 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr15:7,467,152...7,470,303 JBrowse link
G Eny2 ENY2, transcription and export complex 2 subunit involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:75,581,215...75,605,903
Ensembl chr 7:75,581,240...75,605,897
JBrowse link
G Epc2 enhancer of polycomb homolog 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:33,867,219...33,967,908
Ensembl chr 3:33,867,219...33,967,150
JBrowse link
G Epc2l1 enhancer of polycomb homolog 2 (Drosophila)-like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:81,931,963...81,934,681
Ensembl chr 1:81,932,016...81,934,442
JBrowse link
G Ezhip EZH inhibitory protein involved_in
acts_upstream_of_or_within
ISO (PMID:29909548)
MGI:6404408 (MGI:6362099|PMID:31451685)
RGD PMID:29909548 PMID:31451685 MGI:6362099 NCBI chr  X:16,368,582...16,373,642
Ensembl chr  X:16,368,962...16,372,256
JBrowse link
G Fam50a family with sequence similarity 50, member A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:152,095,245...152,102,362
Ensembl chr  X:152,095,245...152,102,362
JBrowse link
G Fam50b family with sequence similarity 50, member B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:30,174,431...30,193,627
Ensembl chr17:30,174,411...30,193,615
JBrowse link
G Fendrr FOXF1 adjacent non-coding developmental regulatory RNA acts_upstream_of_or_within ISO MGI:5470087 (MGI:5462100|PMID:23369715) RGD PMID:23369715 MGI:5462100 NCBI chr19:49,127,225...49,152,779
Ensembl chr19:49,121,214...49,153,240
JBrowse link
G Foxa1 forkhead box A1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
JBrowse link
G Foxa2 forkhead box A2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
JBrowse link
G Foxa3 forkhead box A3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:78,662,067...78,672,321
Ensembl chr 1:78,662,431...78,672,155
JBrowse link
G Ftx FTX transcript, XIST regulator acts_upstream_of_or_within ISO (MGI:4936795|PMID:21118898) RGD PMID:21118898 MGI:4936795 NCBI chr  X:68,588,349...68,630,338 JBrowse link
G Gatad1 GATA zinc finger domain containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:30,507,530...30,519,109
Ensembl chr 4:30,507,538...30,519,107
JBrowse link
G Gpx4 glutathione peroxidase 4 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(MGI:1934492|PMID:11344099)
UniProt
RGD
PMID:11344099 GO_REF:0000024 MGI:1934492 NCBI chr 7:9,650,186...9,652,982
Ensembl chr 7:9,650,185...9,652,982
JBrowse link
G H1f2 H1.2 linker histone, cluster member acts_upstream_of_or_within ISO MGI:2665852 (MGI:2664444|PMID:12808097) RGD PMID:12808097 MGI:2664444 NCBI chr17:41,391,106...41,392,611
Ensembl chr17:41,388,477...41,392,635
JBrowse link
G H1f4 H1.4 linker histone, cluster member acts_upstream_of_or_within ISO MGI:2665857 (MGI:2664444|PMID:12808097) RGD PMID:12808097 MGI:2664444 NCBI chr17:41,486,634...41,487,293
Ensembl chr17:41,486,560...41,487,403
JBrowse link
G H1f5 H1.5 linker histone, cluster member involved_in ISO (PMID:22956909) RGD PMID:22956909 NCBI chr17:42,726,189...42,726,857
Ensembl chr17:42,726,127...42,769,160
JBrowse link
G H2ac1 H2A clustered histone 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5569674|PMID:24506885)
GO_REF:0000107
RGD
Ensembl
PMID:24506885 GO_REF:0000107 MGI:5569674 NCBI chr17:41,171,384...41,171,776
Ensembl chr17:41,135,489...41,172,022
JBrowse link
G H2bc1 H2B clustered histone 1 acts_upstream_of_or_within ISO (MGI:5569674|PMID:24506885) RGD PMID:24506885 MGI:5569674 NCBI chr17:41,172,041...41,172,510
Ensembl chr17:41,171,903...41,176,782
Ensembl chr17:41,171,903...41,176,782
JBrowse link
G H4f3 H1.3 linker histone, cluster member acts_upstream_of_or_within ISO MGI:1931526|MGI:1931527|MGI:2666743 (MGI:2664444|PMID:12808097), (MGI:5691516|PMID:22701719) RGD PMID:12808097 PMID:22701719 MGI:2664444 MGI:5691516 NCBI chr17:41,528,576...41,554,586
Ensembl chr17:41,529,667...41,552,334
JBrowse link
G Hdac5 histone deacetylase 5 TAS RGD PMID:12896970 RGD:1304416 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235
JBrowse link
G Hdac7 histone deacetylase 7 involved_in TAS PMID:12711221 UniProt PMID:12711221 RGD:8553516 NCBI chr 7:128,923,918...128,962,025
Ensembl chr 7:128,923,920...128,962,072
JBrowse link
G Hmga1 high mobility group AT-hook 1 acts_upstream_of_or_within ISO (MGI:5447905|PMID:22797695) RGD PMID:22797695 MGI:5447905 NCBI chr20:5,611,088...5,618,755
Ensembl chr20:5,611,694...5,618,752
JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (MGI:3807115|PMID:18650382) RGD PMID:18650382 MGI:3807115 NCBI chr12:5,973,062...5,978,565
Ensembl chr12:5,901,586...5,978,565
JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:3590648 (MGI:3590574|PMID:12660172)
PMID:21873635
RGD PMID:12660172 PMID:21873635 MGI:3590574, RGD:13792537 NCBI chr11:35,422,328...35,428,247
Ensembl chr11:35,422,328...35,428,254
JBrowse link
G Hmgn2 high mobility group nucleosomal binding domain 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:146,192,126...146,195,580
Ensembl chr 5:146,192,126...146,195,521
JBrowse link
G Hmgn2-ps3 high mobility group nucleosomal binding domain 2, pseudogene 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:99,990,743...99,991,093
Ensembl chr 3:99,990,743...99,991,003
JBrowse link
G Hmgn3 high mobility group nucleosomal binding domain 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:84,022,493...84,059,329
Ensembl chr 8:84,022,495...84,062,976
JBrowse link
G Hmgn5 high mobility group nucleosome binding domain 5 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:5588022 (MGI:5578301|PMID:24392144)
GO_REF:0000043
RGD
UniProt
PMID:24392144 GO_REF:0000043 MGI:5578301 NCBI chr  X:74,085,871...74,094,488 JBrowse link
G Hmgn5b high mobility group nucleosome binding domain 5B involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G Ing1 inhibitor of growth family, member 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:77,937,276...77,945,320
Ensembl chr16:77,937,279...77,946,264
JBrowse link
G Ing2 inhibitor of growth family, member 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:44,573,592...44,584,180
Ensembl chr16:44,575,597...44,583,482
JBrowse link
G Ing3 inhibitor of growth family, member 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:50,477,954...50,505,168
Ensembl chr 4:50,477,962...50,503,715
JBrowse link
G Jak2 Janus kinase 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189
JBrowse link
G Kansl2 KAT8 regulatory NSL complex subunit 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:129,669,031...129,685,828
Ensembl chr 7:129,669,031...129,685,725
JBrowse link
G Kansl3 KAT8 regulatory NSL complex subunit 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:38,562,170...38,605,757
Ensembl chr 9:38,562,177...38,605,692
JBrowse link
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 involved_in ISO (PMID:17540172) RGD PMID:17540172 NCBI chr 3:151,597,903...151,633,657
Ensembl chr 3:151,602,980...151,631,233
JBrowse link
G L3mbtl2 L3MBTL histone methyl-lysine binding protein 2 acts_upstream_of_or_within ISO MGI:5810650 (MGI:5700289|PMID:22770845) RGD PMID:22770845 MGI:5700289 NCBI chr 7:113,186,303...113,209,706
Ensembl chr 7:113,186,370...113,207,489
JBrowse link
G L3mbtl3 L3MBTL histone methyl-lysine binding protein 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:18,988,763...19,089,247
Ensembl chr 1:18,990,618...19,089,263
JBrowse link
G L3mbtl4 L3MBTL histone methyl-lysine binding protein 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:108,295,004...108,747,879
Ensembl chr 9:108,329,669...108,747,774
JBrowse link
G Lamc1 laminin subunit gamma 1 involved_in ISO MGI:2683482 (MGI:5828725|PMID:27234308) RGD PMID:27234308 MGI:5828725 NCBI chr13:65,374,372...65,501,492
Ensembl chr13:65,374,372...65,501,492
JBrowse link
G LOC100363319 high mobility group nucleosomal binding domain 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:83,520,046...83,520,312
Ensembl chr 7:83,520,046...83,520,312
JBrowse link
G LOC120097335 high mobility group nucleosome-binding domain-containing protein 5-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:117,222,188...117,224,158
Ensembl chr 1:117,222,298...117,223,587
JBrowse link
G LOC688980 hypothetical protein LOC688980 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:162,337,285...162,338,246
Ensembl chr 4:162,337,682...162,338,233
JBrowse link
G Lrwd1 leucine-rich repeats and WD repeat domain containing 1 involved_in ISO
IBA
(PMID:20932478)
PMID:21873635
RGD PMID:20932478 PMID:21873635 RGD:13792537 NCBI chr12:20,530,072...20,543,078
Ensembl chr12:20,530,012...20,549,536
JBrowse link
G Mbtd1 mbt domain containing 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:78,839,140...78,895,413
Ensembl chr10:78,839,036...78,893,720
JBrowse link
G Meg3 maternally expressed 3 involved_in ISO (MGI:6444215|PMID:26005002) RGD PMID:26005002 MGI:6444215 NCBI chr 6:128,491,808...128,524,010 JBrowse link
G Mir208b microRNA 208b involved_in ISO MGI:107940 (MGI:5576864|PMID:24137001) RGD PMID:24137001 MGI:5576864 NCBI chr15:28,451,638...28,451,749
Ensembl chr15:28,451,638...28,451,749
JBrowse link
G Mllt6 MLLT6, PHD finger containing acts_upstream_of_or_within ISO MGI:3856248 (MGI:5644399|PMID:21546577) RGD PMID:21546577 MGI:5644399 NCBI chr10:82,657,258...82,678,899
Ensembl chr10:82,656,872...82,676,073
JBrowse link
G Mms22l MMS22-like, DNA repair protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:38,197,707...38,313,745
Ensembl chr 5:38,197,779...38,313,745
JBrowse link
G Morf4l1 mortality factor 4 like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:90,642,988...90,664,518
Ensembl chr 8:90,642,988...90,664,519
JBrowse link
G Morf4l2 mortality factor 4 like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:100,082,562...100,093,658
Ensembl chr  X:100,082,404...100,093,728
JBrowse link
G Mos MOS proto-oncogene, serine/threonine kinase involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:80462|PMID:8631259)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:8631259 GO_REF:0000024 GO_REF:0000107 MGI:80462 NCBI chr 5:16,859,957...16,861,264
Ensembl chr 5:16,859,957...16,861,264
JBrowse link
G Msl3l2 male-specific lethal 3-like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:35,468,877...35,477,037
Ensembl chr20:35,468,888...35,477,757
JBrowse link
G Mtf2 metal response element binding transcription factor 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:1,639,256...1,683,513
Ensembl chr14:1,640,746...1,683,524
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor involved_in ISO MGI:2385681 (MGI:3796491|PMID:18319258) RGD PMID:18319258 MGI:3796491 NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415
JBrowse link
G Myocd myocardin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3525929|PMID:15601857)
GO_REF:0000107
RGD
Ensembl
PMID:15601857 GO_REF:0000107 MGI:3525929 NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
JBrowse link
G Ncoa6 nuclear receptor coactivator 6 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:143,890,896...143,961,916
Ensembl chr 3:143,890,896...143,952,268
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032
JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO MGI:3046930|MGI:5501251 (MGI:3796491|PMID:18319258), (MGI:5613038|PMID:25124037) RGD PMID:18319258 PMID:25124037 MGI:3796491 MGI:5613038 NCBI chr11:44,782,676...44,810,723
Ensembl chr11:44,782,676...44,810,723
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375
JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO (MGI:5576396|PMID:24931609), (MGI:5695791|PMID:26205492) RGD PMID:24931609 PMID:26205492 MGI:5576396 MGI:5695791 NCBI chr13:43,345,091...43,374,316
Ensembl chr13:43,345,115...43,370,229
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:66,771,278...66,816,148
Ensembl chr  X:66,771,349...66,816,146
JBrowse link
G Padi4 peptidyl arginine deiminase 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:5545819|PMID:24463520)
UniProt
RGD
PMID:24463520 GO_REF:0000024 MGI:5545819 NCBI chr 5:153,041,351...153,074,412
Ensembl chr 5:153,041,352...153,074,362
JBrowse link
G Parp10 poly (ADP-ribose) polymerase family, member 10 involved_in ISO (PMID:15674325) RGD PMID:15674325 NCBI chr 7:107,949,031...107,958,377
Ensembl chr 7:107,949,043...107,958,304
JBrowse link
G Pcgf2 polycomb group ring finger 2 acts_upstream_of_or_within ISO MGI:88174 (MGI:3629244|PMID:16687444) RGD PMID:16687444 MGI:3629244 NCBI chr10:82,682,563...82,694,563
Ensembl chr10:82,683,553...82,693,406
JBrowse link
G Phf1 PHD finger protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:5,017,765...5,022,872
Ensembl chr20:5,017,893...5,022,871
JBrowse link
G Phf19 PHD finger protein 19 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:18,175,281...18,197,289
Ensembl chr 3:18,175,282...18,196,405
JBrowse link
G Ptma prothymosin alpha involved_in ISO (MGI:4457993|PMID:20434447) RGD PMID:20434447 MGI:4457993 NCBI chr 9:87,176,251...87,180,333
Ensembl chr 9:87,176,230...87,180,333
JBrowse link
G Pwwp3a PWWP domain containing 3A, DNA repair factor involved_in IBA
IEA
ISS
ISO
PMID:21873635
GO_REF:0000107
GO_REF:0000024
(PMID:20347427)
Ensembl
UniProt
RGD
PMID:20347427 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 7:9,465,180...9,482,053
Ensembl chr 7:9,465,195...9,481,966
JBrowse link
G Rag1 recombination activating 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:87,917,061...87,928,158
Ensembl chr 3:87,917,004...87,928,291
JBrowse link
G Rbl1 RB transcriptional corepressor like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:145,806,160...145,869,434
Ensembl chr 3:145,807,095...145,869,330
JBrowse link
G Rbl2 RB transcriptional corepressor like 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr19:15,876,852...15,923,632
Ensembl chr19:15,876,853...15,923,572
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO (MGI:6161518|PMID:29813070) RGD PMID:29813070 MGI:6161518 NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484
JBrowse link
G RGD1564748 similar to Mortality factor 4-like protein 2 (MORF-related gene X protein) involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:4,753,744...4,762,480
Ensembl chr  X:4,755,173...4,762,467
JBrowse link
G Ring1 ring finger protein 1 acts_upstream_of_or_within_positive_effect ISO MGI:1101759 (MGI:3513221|PMID:15525528), (MGI:3612587|PMID:16359901) RGD PMID:15525528 PMID:16359901 MGI:3513221 MGI:3612587 NCBI chr20:4,830,120...4,833,623
Ensembl chr20:4,830,053...4,833,620
JBrowse link
G Rnf2 ring finger protein 2 acts_upstream_of_or_within_positive_effect ISO MGI:1101770 (MGI:3513221|PMID:15525528), (MGI:3612587|PMID:16359901) RGD PMID:15525528 PMID:16359901 MGI:3513221 MGI:3612587 NCBI chr13:63,553,964...63,584,047
Ensembl chr13:63,554,862...63,583,099
JBrowse link
G Rnf40 ring finger protein 40 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:182,202,475...182,217,899
Ensembl chr 1:182,202,600...182,217,241
JBrowse link
G Satb1 SATB homeobox 1 acts_upstream_of_or_within ISO (MGI:2658695|PMID:12692553) RGD PMID:12692553 MGI:2658695 NCBI chr 9:4,677,817...4,773,061
Ensembl chr 9:4,680,920...4,753,251
JBrowse link
G Setd7 SET domain containing 7, histone lysine methyltransferase acts_upstream_of_or_within ISO (MGI:5471848|PMID:23509280) RGD PMID:23509280 MGI:5471848 NCBI chr 2:135,562,683...135,605,468
Ensembl chr 2:135,562,683...135,605,468
JBrowse link
G Sfmbt1 Scm-like with four mbt domains 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:5,889,046...6,009,860
Ensembl chr16:5,890,782...6,006,605
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:22956909) RGD PMID:22956909 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Sirt2 sirtuin 2 acts_upstream_of_or_within ISO MGI:1915724|MGI:2144471 (MGI:4462728|PMID:20562830) RGD PMID:20562830 MGI:4462728 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 acts_upstream_of_or_within ISO (MGI:2179578|PMID:11980720) RGD PMID:11980720 MGI:2179578 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
JBrowse link
G Snai2 snail family transcriptional repressor 2 acts_upstream_of_or_within_positive_effect ISO (MGI:3770601|PMID:17905753) RGD PMID:17905753 MGI:3770601 NCBI chr11:86,183,800...86,186,109
Ensembl chr11:86,181,909...86,186,200
JBrowse link
G Spin1 spindlin 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:14,055,685...14,105,366
Ensembl chr17:14,055,689...14,105,411
JBrowse link
G Ss18l1 SS18L1 subunit of BAF chromatin remodeling complex involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:167,143,730...167,165,253
Ensembl chr 3:167,143,994...167,165,253
JBrowse link
G Supt4h1 SPT4 homolog, DSIF elongation factor subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:72,539,323...72,545,582
Ensembl chr10:72,539,382...72,545,831
JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase involved_in ISO (PMID:10949293) RGD PMID:10949293 NCBI chr17:74,756,290...74,775,332
Ensembl chr17:74,756,306...74,775,332
JBrowse link
G Suz12 SUZ12 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO (MGI:3612587|PMID:16359901) RGD PMID:16359901 MGI:3612587 NCBI chr10:64,967,035...65,012,916
Ensembl chr10:64,966,967...65,012,738
JBrowse link
G Tada2a transcriptional adaptor 2A acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1927664 (MGI:4462728|PMID:20562830)
GO_REF:0000107
RGD
Ensembl
PMID:20562830 GO_REF:0000107 MGI:4462728 NCBI chr10:68,966,502...69,014,149
Ensembl chr10:68,966,502...69,014,105
JBrowse link
G Tada3 transcriptional adaptor 3 acts_upstream_of_or_within ISO MGI:1927664 (MGI:4462728|PMID:20562830) RGD PMID:20562830 MGI:4462728 NCBI chr 4:146,510,213...146,521,975
Ensembl chr 4:146,510,246...146,521,590
JBrowse link
G Tdrd3 tudor domain containing 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:63,340,531...63,497,208
Ensembl chr15:63,341,235...63,476,110
JBrowse link
G Timm29 translocase of inner mitochondrial membrane 29 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:20,145,264...20,148,233 JBrowse link
G Tonsl tonsoku-like, DNA repair protein involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:108,345,704...108,360,792
Ensembl chr 7:108,346,047...108,360,750
JBrowse link
G Trim28 tripartite motif-containing 28 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:73,652,441...73,659,388
Ensembl chr 1:73,652,709...73,659,380
JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B acts_upstream_of_or_within ISO MGI:2183933 (MGI:3720437|PMID:17488778) RGD PMID:17488778 MGI:3720437 NCBI chr10:36,248,434...36,263,379
Ensembl chr10:36,248,438...36,264,665
JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:9,523,793...9,592,810
Ensembl chr17:9,527,794...9,592,799
JBrowse link
G Usp36 ubiquitin specific peptidase 36 involved_in ISO (PMID:29274341) RGD PMID:29274341 NCBI chr10:103,497,349...103,528,877
Ensembl chr10:103,497,349...103,528,877
JBrowse link
G Utp3 UTP3, small subunit processome component involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:19,515,716...19,517,370
Ensembl chr14:19,515,669...19,517,396
JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a involved_in ISO (MGI:6161518|PMID:29813070) RGD PMID:29813070 MGI:6161518 NCBI chr 7:8,561,015...8,578,243
Ensembl chr 7:8,563,779...8,576,539
JBrowse link
G Zcwpw1 zinc finger CW-type and PWWP domain containing 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:18,880,625...18,910,713
Ensembl chr12:18,880,633...18,910,711
JBrowse link
G Zfp462 zinc finger protein 462 acts_upstream_of_or_within ISO (MGI:4440672|PMID:20219459) RGD PMID:20219459 MGI:4440672 NCBI chr 5:69,670,085...69,810,729
Ensembl chr 5:69,670,328...69,810,327
JBrowse link
G Zfp518a zinc finger protein 518A involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:239,719,305...239,744,978
Ensembl chr 1:239,719,505...239,744,979
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:2180033 (MGI:3789238|PMID:16079796), (MGI:5607719|PMID:20961378) RGD PMID:16079796 PMID:20961378 MGI:3789238 MGI:5607719 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
JBrowse link
G Zzef1 zinc finger ZZ-type and EF-hand domain containing 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:57,413,265...57,550,888
Ensembl chr10:57,411,149...57,549,568
JBrowse link
G Zzz3 zinc finger, ZZ-type containing 3 involved_in ISO (PMID:30217978) RGD PMID:30217978 NCBI chr 2:241,330,366...241,397,308
Ensembl chr 2:241,331,022...241,397,307
JBrowse link
chromatin remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07007744.2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 2:27,601,232...27,601,825 JBrowse link
G AABR07010705.1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 Ensembl chr 2:142,289,467...142,290,623 JBrowse link
G AABR07025089.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr16:26,091,905...26,186,434 JBrowse link
G AABR07028349.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr17:58,274,519...58,277,290 JBrowse link
G AABR07033047.1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 Ensembl chr11:3,479,411...3,480,543 JBrowse link
G AABR07041089.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:111,554,752...111,557,411 JBrowse link
G AABR07055527.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 7:4,352,572...4,353,409 JBrowse link
G Actl6a actin-like 6A acts_upstream_of_or_within
involved_in
ISO (MGI:1314932|PMID:9845365)
(PMID:11726552), (PMID:21303910)
RGD PMID:9845365 PMID:11726552 PMID:21303910 MGI:1314932 NCBI chr 2:115,492,374...115,508,401
Ensembl chr 2:115,492,285...115,508,401
JBrowse link
G Actl6b actin-like 6B involved_in ISO
IEA
(PMID:11726552)
GO_REF:0000107
RGD
Ensembl
PMID:11726552 GO_REF:0000107 NCBI chr12:19,124,887...19,141,419
Ensembl chr12:19,124,916...19,141,376
JBrowse link
G Actr5 actin related protein 5 involved_in ISO (PMID:21303910) RGD PMID:21303910 NCBI chr 3:147,282,461...147,296,110
Ensembl chr 3:147,282,624...147,296,110
JBrowse link
G Actr8 actin related protein 8 involved_in ISO (PMID:21303910) RGD PMID:21303910 NCBI chr16:5,164,131...5,186,353
Ensembl chr16:5,164,129...5,178,577
JBrowse link
G Arid1a AT-rich interaction domain 1A involved_in
acts_upstream_of_or_within
ISO (PMID:11726552)
MGI:3796520 (MGI:3789431|PMID:18448678)
RGD PMID:11726552 PMID:18448678 MGI:3789431 NCBI chr 5:145,908,181...145,981,609
Ensembl chr 5:145,908,181...145,985,564
JBrowse link
G Arid1b AT-rich interaction domain 1B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:45,567,991...45,923,644
Ensembl chr 1:45,563,623...45,923,493
JBrowse link
G Ash1l ASH1 like histone lysine methyltransferase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:174,346,267...174,483,057
Ensembl chr 2:174,346,150...174,483,055
JBrowse link
G Atpsckmt ATP synthase c subunit lysine N-methyltransferase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:82,603,086...82,618,325
Ensembl chr 2:82,603,009...82,618,308
JBrowse link
G Atrx ATRX, chromatin remodeler involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:20651253), (PMID:27029610)
GO_REF:0000108
UniProt
RGD
GOC
PMID:20651253 PMID:27029610 GO_REF:0000024 GO_REF:0000108 NCBI chr  X:70,850,981...70,997,330
Ensembl chr  X:70,850,981...70,997,330
JBrowse link
G Atxn3 ataxin 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:121,072,228...121,107,902
Ensembl chr 6:121,074,448...121,107,902
JBrowse link
G Aurka aurora kinase A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:161,128,309...161,144,524
Ensembl chr 3:161,128,313...161,144,390
JBrowse link
G Aurkb aurora kinase B involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:53,744,290...53,750,831
Ensembl chr10:53,745,142...53,750,837
JBrowse link
G Bap1 Brca1 associated protein 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:6,446,709...6,455,535
Ensembl chr16:6,446,709...6,455,535
JBrowse link
G Baz1a bromodomain adjacent to zinc finger domain, 1A involved_in ISO (PMID:10880450) RGD PMID:10880450 NCBI chr 6:72,389,701...72,512,516
Ensembl chr 6:72,389,703...72,512,459
JBrowse link
G Baz1b bromodomain adjacent to zinc finger domain, 1B acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:2179578|PMID:11980720)
PMID:21873635
(PMID:15543136)
RGD PMID:11980720 PMID:15543136 PMID:21873635 MGI:2179578, RGD:13792537 NCBI chr12:21,431,985...21,489,956
Ensembl chr12:21,431,985...21,490,426
JBrowse link
G Baz2a bromodomain adjacent to zinc finger domain, 2A acts_upstream_of_or_within ISO MGI:1935129 (MGI:2149896|PMID:11532953) RGD PMID:11532953 MGI:2149896 NCBI chr 7:523,204...560,911
Ensembl chr 7:523,265...560,659
JBrowse link
G Bckdk branched chain ketoacid dehydrogenase kinase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:182,515,335...182,520,007
Ensembl chr 1:182,515,327...182,536,633
JBrowse link
G Bcor BCL6 co-repressor involved_in ISO (PMID:16943429) RGD PMID:16943429 NCBI chr  X:10,609,756...10,729,613
Ensembl chr  X:10,687,732...10,729,613
JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger involved_in ISO (PMID:26151332) RGD PMID:26151332 NCBI chr17:81,332,175...81,341,625
Ensembl chr17:81,332,214...81,388,690
JBrowse link
G Bptf bromodomain PHD finger transcription factor involved_in ISO (PMID:14609955) RGD PMID:14609955 NCBI chr10:91,980,279...92,082,731
Ensembl chr10:91,982,758...92,082,769
JBrowse link
G Brca2 BRCA2, DNA repair associated involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567
JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:6867105|PMID:34180153)
UniProt
RGD
PMID:34180153 GO_REF:0000024 MGI:6867105 NCBI chr 9:1,986,942...1,989,484
Ensembl chr 9:1,986,575...1,991,080
JBrowse link
G Brd1 bromodomain containing 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:119,774,187...119,822,031
Ensembl chr 7:119,774,188...119,822,031
JBrowse link
G Brd2 bromodomain containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:4,727,078...4,735,389
Ensembl chr20:4,728,151...4,735,388
JBrowse link
G Brd3 bromodomain containing 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:10,773,163...10,829,675
Ensembl chr 3:10,775,272...10,829,577
JBrowse link
G Brd4 bromodomain containing 4 involved_in ISO
IBA
(PMID:23728299)
PMID:21873635
RGD PMID:23728299 PMID:21873635 RGD:13792537 NCBI chr 7:11,216,446...11,296,029
Ensembl chr 7:11,216,446...11,295,539
JBrowse link
G Brdt bromodomain testis associated involved_in
acts_upstream_of_or_within
IDA
IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(MGI:5430881|PMID:19794495)
(MGI:2668282|PMID:12861021)
Ensembl
RGD
PMID:12861021 PMID:19794495 PMID:22215678 PMID:21873635 GO_REF:0000107 MGI:2668282 MGI:5430881, RGD:9586361, RGD:13792537 NCBI chr14:2,421,094...2,445,842
Ensembl chr14:2,387,796...2,445,842
JBrowse link
G Brpf1 bromodomain and PHD finger containing, 1 involved_in ISO (PMID:27939640)
(MGI:5887156|PMID:27939640)
RGD PMID:27939640 MGI:5887156 NCBI chr 4:146,456,344...146,472,781
Ensembl chr 4:146,456,318...146,472,649
JBrowse link
G Brpf3 bromodomain and PHD finger containing, 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:6,864,684...6,902,760
Ensembl chr20:6,865,985...6,902,690
JBrowse link
G Btaf1 B-TFIID TATA-box binding protein associated factor 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:234,653,219...234,743,903
Ensembl chr 1:234,653,156...234,743,903
JBrowse link
G Carm1 coactivator-associated arginine methyltransferase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:20,097,262...20,141,950
Ensembl chr 8:20,097,254...20,147,689
JBrowse link
G Cdk1 cyclin-dependent kinase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:19,266,226...19,281,417
Ensembl chr20:19,266,248...19,281,408
JBrowse link
G Cdk2 cyclin dependent kinase 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:1,129,878...1,137,431
Ensembl chr 7:1,129,811...1,137,403
JBrowse link
G Cdk5 cyclin-dependent kinase 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Cecr2 CECR2, histone acetyl-lysine reader involved_in ISO (PMID:15640247) RGD PMID:15640247 NCBI chr 4:153,890,310...153,998,078
Ensembl chr 4:153,890,206...153,993,451
JBrowse link
G Cfdp1 craniofacial development protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:39,718,313...39,823,819
Ensembl chr19:39,718,347...39,823,824
JBrowse link
G Chd1 chromodomain helicase DNA binding protein 1 acts_upstream_of_or_within
involved_in
ISO MGI:1316736 (MGI:3616364|PMID:16415155)
(PMID:28866611)
RGD PMID:16415155 PMID:28866611 MGI:3616364 NCBI chr 1:56,661,743...56,729,119
Ensembl chr 1:56,664,054...56,728,125
JBrowse link
G Chd1l chromodomain helicase DNA binding protein 1-like involved_in ISO
IBA
(PMID:19661379)
PMID:21873635
RGD PMID:19661379 PMID:21873635 RGD:13792537 NCBI chr 2:185,138,526...185,217,498
Ensembl chr 2:185,139,308...185,217,595
JBrowse link
G Chd3 chromodomain helicase DNA binding protein 3 involved_in ISO
IBA
(PMID:30397230), (PMID:9790534)
PMID:21873635
RGD PMID:9790534 PMID:30397230 PMID:21873635 RGD:13792537 NCBI chr10:54,063,629...54,090,030
Ensembl chr10:54,063,629...54,090,047
JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 involved_in ISO
IBA
(PMID:9790534)
PMID:21873635
RGD PMID:9790534 PMID:21873635 RGD:13792537 NCBI chr 4:157,898,503...157,931,632
Ensembl chr 4:157,899,391...157,931,541
JBrowse link
G Chd5 chromodomain helicase DNA binding protein 5 involved_in IEA
ISS
ISO
IBA
GO_REF:0000002
GO_REF:0000024
GO_REF:0000107
(PMID:23948251)
PMID:21873635
InterPro
UniProt
Ensembl
RGD
PMID:23948251 PMID:21873635 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 5:162,848,273...162,898,997
Ensembl chr 5:162,848,394...162,896,291
JBrowse link
G Chd6 chromodomain helicase DNA binding protein 6 involved_in IEA
IBA
GO_REF:0000108
PMID:21873635
GOC PMID:21873635 GO_REF:0000108, RGD:13792537 NCBI chr 3:149,596,509...149,757,765
Ensembl chr 3:149,596,509...149,757,755
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:2176467|MGI:4433295 (MGI:5694290|PMID:26102480)
PMID:21873635
RGD PMID:26102480 PMID:21873635 MGI:5694290, RGD:13792537 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 involved_in ISO
IBA
IEA
ISS
(PMID:18378692)
PMID:21873635
GO_REF:0000104
GO_REF:0000024
RGD
UniProt
PMID:18378692 PMID:21873635 GO_REF:0000024 GO_REF:0000104, RGD:13792537 NCBI chr15:24,905,789...24,965,461
Ensembl chr15:24,905,789...24,951,285
JBrowse link
G Chd9 chromodomain helicase DNA binding protein 9 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:15,941,535...16,146,220
Ensembl chr19:15,942,687...16,164,556
JBrowse link
G Chek1 checkpoint kinase 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5294291|PMID:18243098)
UniProt
RGD
PMID:18243098 GO_REF:0000024 MGI:5294291 NCBI chr 8:36,420,565...36,443,477
Ensembl chr 8:36,420,569...36,441,009
JBrowse link
G Chrac1 chromatin accessibility complex subunit 1 involved_in ISO
IBA
(PMID:10880450)
PMID:21873635
RGD PMID:10880450 PMID:21873635 RGD:13792537 NCBI chr 7:105,013,047...105,016,435
Ensembl chr 7:105,013,015...105,017,136
JBrowse link
G Chtop chromatin target of PRMT1 involved_in ISO
ISS
(PMID:25284789)
GO_REF:0000024
RGD
UniProt
PMID:25284789 GO_REF:0000024 NCBI chr 2:175,981,266...175,992,854
Ensembl chr 2:175,981,271...175,992,748
JBrowse link
G Clock clock circadian regulator involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
JBrowse link
G Coprs coordinator of PRMT5 and differentiation stimulator involved_in ISO (PMID:18404153) RGD PMID:18404153 NCBI chr16:75,721,264...75,726,375
Ensembl chr16:75,720,061...75,726,375
JBrowse link
G Crebbp CREB binding protein involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:11,335,551...11,461,888
Ensembl chr10:11,335,953...11,461,888
JBrowse link
G Daxx death-domain associated protein involved_in ISO (PMID:20651253) RGD PMID:20651253 NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
JBrowse link
G Dcaf1 DDB1 and CUL4 associated factor 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:107,466,229...107,540,633
Ensembl chr 8:107,474,312...107,540,627
JBrowse link
G Dmap1 DNA methyltransferase 1-associated protein 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:131,143,726...131,151,760
Ensembl chr 5:131,143,729...131,151,742
JBrowse link
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:33,890,706...34,009,420
Ensembl chr11:33,890,490...34,009,420
JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:3,919,623...3,936,751
Ensembl chr20:3,919,624...3,941,547
JBrowse link
G ENSRNOG00000063631 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 Ensembl chr  X:141,794,027...141,795,524 JBrowse link
G ENSRNOG00000067141 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 Ensembl chr10:31,086,733...31,087,921 JBrowse link
G ENSRNOG00000069033 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 Ensembl chr 7:78,933,181...78,934,754 JBrowse link
G Eomes eomesodermin involved_in ISO (MGI:6220563|PMID:30186101) RGD PMID:30186101 MGI:6220563 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316
JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (MGI:4430816|PMID:16325578) RGD PMID:16325578 MGI:4430816 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088
JBrowse link
G Ep400 E1A binding protein p400 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:45,891,886...46,002,523
Ensembl chr12:45,891,916...45,998,861
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587
JBrowse link
G Ercc6l ERCC excision repair 6 like, spindle assembly checkpoint helicase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:67,245,414...67,261,222
Ensembl chr  X:67,245,414...67,280,756
JBrowse link
G Ercc6l2 ERCC excision repair 6 like 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:1,076,486...1,311,281
Ensembl chr17:1,216,428...1,310,275
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483
JBrowse link
G Eya2 EYA transcriptional coactivator and phosphatase 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:154,335,558...154,519,006
Ensembl chr 3:154,335,400...154,518,793
JBrowse link
G Eya3 EYA transcriptional coactivator and phosphatase 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:144,806,523...144,934,522
Ensembl chr 5:144,806,577...144,934,518
JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit involved_in ISO (MGI:3820717|PMID:19026781) RGD PMID:19026781 MGI:3820717 NCBI chr10:86,126,023...86,162,001
Ensembl chr10:86,126,015...86,161,921
JBrowse link
G Fbl fibrillarin involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:83,469,832...83,478,932
Ensembl chr 1:83,469,832...83,478,932
JBrowse link
G Fbll1 fibrillarin-like 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:20,258,656...20,260,299
Ensembl chr10:20,258,656...20,260,299
JBrowse link
G Fbxl19 F-box and leucine-rich repeat protein 19 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:182,356,899...182,380,839
Ensembl chr 1:182,360,830...182,380,083
JBrowse link
G Foxa1 forkhead box A1 involved_in IEA
ISO
GO_REF:0000107
(MGI:4456944|PMID:15748903)
Ensembl
RGD
PMID:15748903 GO_REF:0000107 MGI:4456944 NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (MGI:3697020|PMID:17028180) RGD PMID:17028180 MGI:3697020 NCBI chr  X:14,908,494...14,924,994
Ensembl chr  X:14,908,494...14,923,838
JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO (MGI:3046385|PMID:15087456), (MGI:5289737|PMID:21867929) RGD PMID:15087456 PMID:21867929 MGI:3046385 MGI:5289737 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
G Gatad1 GATA zinc finger domain containing 1 involved_in ISO (PMID:20850016) RGD PMID:20850016 NCBI chr 4:30,507,530...30,519,109
Ensembl chr 4:30,507,538...30,519,107
JBrowse link
G Gatad2a GATA zinc finger domain containing 2A involved_in ISO (PMID:9790534) RGD PMID:9790534 NCBI chr16:19,429,578...19,520,320
Ensembl chr16:19,429,578...19,519,587
JBrowse link
G Gatad2b GATA zinc finger domain containing 2B involved_in ISO (PMID:9790534) RGD PMID:9790534 NCBI chr 2:175,748,594...175,829,837
Ensembl chr 2:175,749,433...175,825,542
JBrowse link
G Gtf2b general transcription factor IIB involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:231,767,317...231,785,626
Ensembl chr 2:231,767,238...231,785,651
JBrowse link
G Gtf3c4 general transcription factor IIIC subunit 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:12,154,803...12,172,795
Ensembl chr 3:12,154,805...12,172,725
JBrowse link
G Haspin histone H3 associated protein kinase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:57,747,731...57,750,532
Ensembl chr10:57,747,573...57,750,512
JBrowse link
G Hcfc1 host cell factor C1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:151,687,779...151,712,688
Ensembl chr  X:151,687,779...151,712,638
JBrowse link
G Hcfc2 host cell factor C2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:20,983,986...21,019,826
Ensembl chr 7:20,991,017...21,019,801
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO
IEA
(PMID:9790534)
GO_REF:0000108
RGD
GOC
PMID:9790534 GO_REF:0000108 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hdac10 histone deacetylase 10 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:120,199,126...120,205,850
Ensembl chr 7:120,199,129...120,204,228
JBrowse link
G Hdac11 histone deacetylase 11 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:123,645,873...123,667,407
Ensembl chr 4:123,650,157...123,667,405
JBrowse link
G Hdac1l histone deacetylase 1-like involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:80,453,139...80,454,593
Ensembl chr 9:80,453,139...80,454,593
JBrowse link
G Hdac2 histone deacetylase 2 involved_in ISO (PMID:9790534) RGD PMID:9790534 NCBI chr20:40,548,250...40,571,609
Ensembl chr20:40,548,250...40,571,609
JBrowse link
G Hdac3 histone deacetylase 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr18:29,770,637...29,789,850
Ensembl chr18:29,770,636...29,793,856
JBrowse link
G Hdac4 histone deacetylase 4 involved_in ISO
IEA
(PMID:18850004)
GO_REF:0000108
RGD
GOC
PMID:18850004 GO_REF:0000108 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164
JBrowse link
G Hdac7 histone deacetylase 7 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:128,923,918...128,962,025
Ensembl chr 7:128,923,920...128,962,072
JBrowse link
G Hdac8 histone deacetylase 8 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:67,385,288...67,593,014
Ensembl chr  X:67,385,289...67,592,923
JBrowse link
G Hdgf heparin binding growth factor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:173,370,147...173,379,756
Ensembl chr 2:173,370,465...173,379,747
JBrowse link
G Hdgfl2 HDGF like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:909,581...929,195
Ensembl chr 9:909,614...929,186
JBrowse link
G Hdgfl3 HDGF like 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:135,822,600...135,876,719
Ensembl chr 1:135,827,549...135,876,719
JBrowse link
G Hipk4 homeodomain interacting protein kinase 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:82,810,708...82,821,080
Ensembl chr 1:82,810,708...82,821,077
JBrowse link
G Hira histone cell cycle regulator involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:82,024,469...82,133,212
Ensembl chr11:82,024,469...82,133,529
JBrowse link
G Hltf helicase-like transcription factor involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:102,549,724...102,609,492
Ensembl chr 2:102,549,724...102,609,327
JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within
involved_in
ISO MGI:2154359 (MGI:3699537|PMID:11733582)
(MGI:2388420|PMID:12367519)
RGD PMID:11733582 PMID:12367519 MGI:2388420 MGI:3699537 NCBI chr12:41,638,536...41,672,806
Ensembl chr12:41,645,587...41,672,104
JBrowse link
G Hr HR, lysine demethylase and nuclear receptor corepressor involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:45,626,835...45,646,313
Ensembl chr15:45,626,835...45,646,313
JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:20,871,278...21,001,378
Ensembl chr  X:20,873,795...21,001,262
JBrowse link
G Ing3 inhibitor of growth family, member 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:50,477,954...50,505,168
Ensembl chr 4:50,477,962...50,503,715
JBrowse link
G Ing4 inhibitor of growth family, member 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:157,841,882...157,850,519
Ensembl chr 4:157,841,951...157,850,265
JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:21303910) RGD PMID:21303910 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911
JBrowse link
G Ino80b INO80 complex subunit B involved_in ISO (PMID:21303910) RGD PMID:21303910 NCBI chr 4:115,627,907...115,631,069
Ensembl chr 4:115,627,908...115,631,456
JBrowse link
G Ino80c INO80 complex subunit C involved_in ISO
IEA
IBA
(PMID:21303910)
GO_REF:0000002
PMID:21873635
RGD
InterPro
PMID:21303910 PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr18:15,378,764...15,398,574
Ensembl chr18:15,378,770...15,393,403
JBrowse link
G Ino80d INO80 complex subunit D involved_in ISO (PMID:21303910) RGD PMID:21303910 NCBI chr 9:64,447,075...64,514,013
Ensembl chr 9:64,457,165...64,515,242
JBrowse link
G Ino80e INO80 complex subunit E involved_in ISO
IEA
(PMID:21303910)
GO_REF:0000002
RGD
InterPro
PMID:21303910 GO_REF:0000002 NCBI chr 1:181,461,406...181,472,059
Ensembl chr 1:181,461,408...181,472,469
JBrowse link
G Irf4 interferon regulatory factor 4 acts_upstream_of_or_within ISO (MGI:3615721|PMID:16428437) RGD PMID:16428437 MGI:3615721 NCBI chr17:33,721,800...33,742,570
Ensembl chr17:33,721,811...33,740,070
JBrowse link
G Iws1 interacts with SUPT6H, CTD assembly factor 1 involved_in ISO
ISS
(PMID:19141475)
GO_REF:0000024
RGD
UniProt
PMID:19141475 GO_REF:0000024 NCBI chr18:23,695,496...23,737,363
Ensembl chr18:23,695,425...23,736,172
JBrowse link
G Jade1 jade family PHD finger 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:124,543,259...124,596,361
Ensembl chr 2:124,543,286...124,596,354
JBrowse link
G Jade2 jade family PHD finger 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:36,076,483...36,124,210
Ensembl chr10:36,078,917...36,116,984
JBrowse link
G Jak2 Janus kinase 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189
JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:19,777,487...19,957,696
Ensembl chr17:19,777,266...19,955,690
JBrowse link
G Jdp2 Jun dimerization protein 2 acts_upstream_of_or_within ISO MGI:1343091 (MGI:3807603|PMID:17464331) RGD PMID:17464331 MGI:3807603 NCBI chr 6:105,261,619...105,302,386
Ensembl chr 6:105,261,373...105,301,485
JBrowse link
G Jmjd1c jumonji domain containing 1C involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:21,332,147...21,494,220
Ensembl chr20:21,332,147...21,463,122
JBrowse link
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:102,041,131...102,047,182
Ensembl chr10:102,041,120...102,047,182
JBrowse link
G Kat14 lysine acetyltransferase 14 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:131,736,430...131,781,732
Ensembl chr 3:131,736,549...131,781,706
JBrowse link
G Kat2a lysine acetyltransferase 2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166
JBrowse link
G Kat2b lysine acetyltransferase 2B involved_in ISO (PMID:17707232) RGD PMID:17707232 NCBI chr 9:6,562,525...6,667,064
Ensembl chr 9:6,562,288...6,667,064
JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458
JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:80,221,519...80,255,590
Ensembl chr10:80,221,524...80,255,567
JBrowse link
G Kat8 lysine acetyltransferase 8 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:182,524,355...182,536,638
Ensembl chr 1:182,515,327...182,536,633
JBrowse link
G Kdm2a lysine demethylase 2A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787
JBrowse link
G Kdm2b lysine demethylase 2B involved_in ISO (PMID:16943429) RGD PMID:16943429 NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355
JBrowse link
G Kdm3a lysine demethylase 3A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:103,630,907...103,675,073
Ensembl chr 4:103,630,908...103,675,073
JBrowse link
G Kdm3b lysine demethylase 3B involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr18:26,380,859...26,436,701
Ensembl chr18:26,380,964...26,436,628
JBrowse link
G Kdm4a lysine demethylase 4A involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3629551|PMID:16738407)
RGD PMID:16738407 PMID:21873635 MGI:3629551, RGD:13792537 NCBI chr 5:131,672,754...131,719,534
Ensembl chr 5:131,672,754...131,719,501
JBrowse link
G Kdm4b lysine demethylase 4B involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3845989|PMID:19144645)
RGD PMID:19144645 PMID:21873635 MGI:3845989, RGD:13792537 NCBI chr 9:1,158,737...1,237,228
Ensembl chr 9:1,158,752...1,236,543
JBrowse link
G Kdm4c lysine demethylase 4C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:88,100,710...88,306,821
Ensembl chr 5:88,100,733...88,306,818
JBrowse link
G Kdm4d lysine demethylase 4D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:11,279,756...11,304,920
Ensembl chr 8:11,268,859...11,305,290
JBrowse link
G Kdm5a lysine demethylase 5A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:153,565,909...153,643,912
Ensembl chr 4:153,565,846...153,642,422
JBrowse link
G Kdm5b lysine demethylase 5B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:46,001,589...46,073,868
Ensembl chr13:46,002,542...46,073,872
JBrowse link
G Kdm5c lysine demethylase 5C involved_in IEA
IBA
GO_REF:0000108
PMID:21873635
GOC PMID:21873635 GO_REF:0000108, RGD:13792537 NCBI chr  X:21,345,459...21,387,045
Ensembl chr  X:21,345,481...21,381,870
JBrowse link
G Kdm5d lysine demethylase 5D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  Y:527,069...624,019
Ensembl chr  Y:530,401...624,018
JBrowse link
G Kdm6a lysine demethylase 6A involved_in ISO (MGI:4866963|PMID:21095589) RGD PMID:21095589 MGI:4866963 NCBI chr  X:4,337,466...4,477,100
Ensembl chr  X:4,337,750...4,477,062
JBrowse link
G Kdm6b lysine demethylase 6B involved_in ISO (MGI:4866963|PMID:21095589) RGD PMID:21095589 MGI:4866963 NCBI chr10:54,120,716...54,142,212
Ensembl chr10:54,121,848...54,130,794
JBrowse link
G Kdm7a lysine demethylase 7A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:67,899,407...67,974,264
Ensembl chr 4:67,904,307...67,966,998
JBrowse link
G Kdm8 lysine demethylase 8 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:180,013,969...180,028,829
Ensembl chr 1:180,020,656...180,028,841
JBrowse link
G Klf1 KLF transcription factor 1 acts_upstream_of_or_within ISO (MGI:3056025|PMID:15489291) RGD PMID:15489291 MGI:3056025 NCBI chr19:23,250,627...23,253,802
Ensembl chr19:23,250,631...23,253,758
JBrowse link
G Kmt2c lysine methyltransferase 2C involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:9,620,638...9,834,787
Ensembl chr 4:9,609,627...9,833,539
JBrowse link
G Kmt5a lysine methyltransferase 5A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:32,139,353...32,167,777
Ensembl chr12:32,139,178...32,162,711
JBrowse link
G Kmt5b lysine methyltransferase 5B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000108
(MGI:3043964|PMID:15145825)
GOC
RGD
PMID:15145825 GO_REF:0000108 MGI:3043964 NCBI chr 1:201,000,444...201,049,819
Ensembl chr 1:201,000,444...201,049,819
JBrowse link
G Kmt5c lysine methyltransferase 5C involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000108
(MGI:5659778|PMID:25335925)
GOC
RGD
PMID:25335925 GO_REF:0000108 MGI:5659778 NCBI chr 1:69,099,531...69,107,145
Ensembl chr 1:69,099,539...69,107,145
JBrowse link
G Map3k7 mitogen activated protein kinase kinase kinase 7 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:46,356,973...46,415,597
Ensembl chr 5:46,357,931...46,415,597
JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 involved_in ISO (PMID:16428440), (PMID:9790534) RGD PMID:9790534 PMID:16428440 NCBI chr18:64,174,002...64,240,795
Ensembl chr18:64,174,002...64,240,794
JBrowse link
G Mbd3 methyl-CpG binding domain protein 3 involved_in ISO (PMID:16428440), (PMID:9790534) RGD PMID:9790534 PMID:16428440 NCBI chr 7:9,312,961...9,320,166
Ensembl chr 7:9,313,098...9,320,165
JBrowse link
G Mcrs1 microspherule protein 1 involved_in ISO (PMID:21303910) RGD PMID:21303910 NCBI chr 7:130,383,853...130,392,667
Ensembl chr 7:130,383,853...130,392,685
JBrowse link
G Meaf6 MYST/Esa1-associated factor 6 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:137,344,681...137,369,703
Ensembl chr 5:137,344,380...137,370,014
JBrowse link
G Med24 mediator complex subunit 24 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:83,664,609...83,702,315
Ensembl chr10:83,664,609...83,690,123
JBrowse link
G Men1 menin 1 acts_upstream_of_or_within ISO MGI:2158698|MGI:88393 (MGI:3616131|PMID:15044367), (MGI:3616364|PMID:16415155) RGD PMID:15044367 PMID:16415155 MGI:3616131 MGI:3616364 NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871
JBrowse link
G Mettl8 methyltransferase 8, methylcytidine involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000108
(MGI:3582105|PMID:15992539)
GOC
RGD
PMID:15992539 GO_REF:0000108 MGI:3582105 NCBI chr 3:55,731,453...55,863,652
Ensembl chr 3:55,770,167...55,863,676
JBrowse link
G Mier1 MIER1 transcriptional regulator involved_in ISO (PMID:12482978) RGD PMID:12482978 NCBI chr 5:117,876,012...117,927,592
Ensembl chr 5:117,870,382...117,927,589
JBrowse link
G Mier2 MIER family member 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:10,153,501...10,169,381
Ensembl chr 7:10,153,649...10,169,378
JBrowse link
G Morc2 MORC family CW-type zinc finger 2 involved_in ISO (PMID:23260667) RGD PMID:23260667 NCBI chr14:78,529,603...78,571,375
Ensembl chr14:78,527,009...78,571,343
JBrowse link
G Msl1 MSL complex subunit 1 involved_in ISO
IEA
(MGI:6355689|PMID:24913909)
GO_REF:0000107
RGD
Ensembl
PMID:24913909 GO_REF:0000107 MGI:6355689 NCBI chr10:83,755,380...83,767,147
Ensembl chr10:83,755,720...83,765,726
JBrowse link
G Msl3 MSL complex subunit 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:25,638,029...25,655,698
Ensembl chr  X:25,637,804...25,655,697
JBrowse link
G Mst1 macrophage stimulating 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:108,767,886...108,773,425
Ensembl chr 8:108,768,839...108,773,416
JBrowse link
G Mta1 metastasis associated 1 involved_in ISO (PMID:9790534) RGD PMID:9790534 NCBI chr 6:132,178,608...132,217,641
Ensembl chr 6:132,178,853...132,217,641
JBrowse link
G Mta2 metastasis associated 1 family, member 2 involved_in ISO (PMID:9790534) RGD PMID:9790534 NCBI chr 1:205,838,181...205,846,903
Ensembl chr 1:205,837,964...205,846,946
JBrowse link
G Mta3 metastasis associated 1 family, member 3 involved_in ISO (PMID:9790534) RGD PMID:9790534 NCBI chr 6:10,867,028...10,987,221
Ensembl chr 6:10,867,011...10,986,883
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISO
ISS
(PMID:21533051)
GO_REF:0000024
RGD
UniProt
PMID:21533051 GO_REF:0000024 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415
JBrowse link
G Mysm1 myb-like, SWIRM and MPN domains 1 involved_in ISO
IBA
(PMID:17707232)
PMID:21873635
RGD PMID:17707232 PMID:21873635 RGD:13792537 NCBI chr 5:109,761,345...109,826,652
Ensembl chr 5:109,776,286...109,819,967
JBrowse link
G Naa40 N(alpha)-acetyltransferase 40, NatD catalytic subunit involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:204,410,636...204,430,890
Ensembl chr 1:204,413,498...204,430,717
JBrowse link
G Naa50 N(alpha)-acetyltransferase 50, NatE catalytic subunit involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:56,538,366...56,560,842
Ensembl chr11:56,538,366...56,560,842
JBrowse link
G Nat8f3 N-acetyltransferase 8 (GCN5-related) family member 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:118,241,792...118,246,010
Ensembl chr 4:118,239,304...118,285,500
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:154,738,566...154,821,395
Ensembl chr 3:154,738,581...154,818,594
JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO MGI:3525252 (MGI:5792624|PMID:27129283) RGD PMID:27129283 MGI:5792624 NCBI chr11:44,782,676...44,810,723
Ensembl chr11:44,782,676...44,810,723
JBrowse link
G Nfrkb nuclear factor related to kappa B binding protein involved_in ISO (PMID:21303910) RGD PMID:21303910 NCBI chr 8:29,831,802...29,863,360
Ensembl chr 8:29,831,812...29,863,359
JBrowse link
G Npm1 nucleophosmin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
JBrowse link
G Npm2 nucleophosmin/nucleoplasmin 2 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:12714744)
PMID:21873635
MGI:2182141 (MGI:2662932|PMID:12714744)
RGD PMID:12714744 PMID:21873635 MGI:2662932, RGD:13792537 NCBI chr15:45,722,494...45,729,246
Ensembl chr15:45,722,400...45,729,726
JBrowse link
G Npm3 nucleophosmin/nucleoplasmin, 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:244,595,638...244,597,623
Ensembl chr 1:244,595,644...244,597,591
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 involved_in IMP PMID:12917342 UniProt PMID:12917342 RGD:8553888 NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375
JBrowse link
G Nsd1 nuclear receptor binding SET domain protein 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:9,311,963...9,426,373
Ensembl chr17:9,315,237...9,425,358
JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:76,833,194...76,911,304
Ensembl chr14:76,835,637...76,913,641
JBrowse link
G Nsd3 nuclear receptor binding SET domain protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000108
(MGI:3625557|PMID:16682010)
GOC
RGD
PMID:16682010 GO_REF:0000108 MGI:3625557 NCBI chr16:66,354,030...66,466,202
Ensembl chr16:66,358,973...66,465,423
JBrowse link
G Ntmt1 N-terminal Xaa-Pro-Lys N-methyltransferase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:14,093,374...14,110,565
Ensembl chr 3:14,093,977...14,110,663
JBrowse link
G Nudt5 nudix hydrolase 5 involved_in ISO
ISS
(PMID:27257257)
GO_REF:0000024
RGD
UniProt
PMID:27257257 GO_REF:0000024 NCBI chr17:72,435,690...72,459,008
Ensembl chr17:72,435,697...72,459,001
JBrowse link
G Oga O-GlcNAcase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:244,598,285...244,633,835
Ensembl chr 1:244,598,292...244,634,359
JBrowse link
G Pabpc1l poly(A) binding protein, cytoplasmic 1-like acts_upstream_of_or_within ISO MGI:5437740 (MGI:5688228|PMID:26134869) RGD PMID:26134869 MGI:5688228 NCBI chr 3:152,692,825...152,725,997
Ensembl chr 3:152,693,700...152,725,997
JBrowse link
G Padi2 peptidyl arginine deiminase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:153,209,053...153,251,632
Ensembl chr 5:153,209,053...153,251,632
JBrowse link
G Padi4 peptidyl arginine deiminase 4 involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:5545819|PMID:24463520)
UniProt
RGD
PMID:24463520 PMID:21873635 GO_REF:0000024 MGI:5545819, RGD:13792537 NCBI chr 5:153,041,351...153,074,412
Ensembl chr 5:153,041,352...153,074,362
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 involved_in ISO
IEA
ISS
(PMID:23260667)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:23260667 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:152,111,172...152,226,390
Ensembl chr 1:152,111,188...152,226,383
JBrowse link
G Pax6 paired box 6 involved_in ISO
IEA
(MGI:6220563|PMID:30186101)
GO_REF:0000107
RGD
Ensembl
PMID:30186101 GO_REF:0000107 MGI:6220563 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Pax7 paired box 7 acts_upstream_of_or_within ISO MGI:1857831|MGI:3047633 (MGI:5440096|PMID:23070814) RGD PMID:23070814 MGI:5440096 NCBI chr 5:151,996,368...152,098,023
Ensembl chr 5:151,999,092...152,097,979
JBrowse link
G Paxip1 PAX interacting protein 1 involved_in ISO (PMID:17178841) RGD PMID:17178841 NCBI chr 4:7,524,887...7,576,663
Ensembl chr 4:7,525,004...7,576,548
JBrowse link
G Pbrm1 polybromo 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:6,213,507...6,312,895
Ensembl chr16:6,213,300...6,311,780
JBrowse link
G Pcgf1 polycomb group ring finger 1 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:16943429), (PMID:26151332)
Ensembl
UniProt
RGD
PMID:16943429 PMID:26151332 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:115,576,165...115,587,019
Ensembl chr 4:115,583,867...115,587,008
JBrowse link
G Pcgf2 polycomb group ring finger 2 involved_in ISO (PMID:26151332) RGD PMID:26151332 NCBI chr10:82,682,563...82,694,563
Ensembl chr10:82,683,553...82,693,406
JBrowse link
G Pcgf6 polycomb group ring finger 6 involved_in ISO
ISS
(PMID:26151332)
GO_REF:0000024
RGD
UniProt
PMID:26151332 GO_REF:0000024 NCBI chr 1:245,925,354...245,944,964
Ensembl chr 1:245,925,360...245,944,914
JBrowse link
G Per1 period circadian regulator 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5014424|PMID:21680841)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:21680841 GO_REF:0000024 GO_REF:0000107 MGI:5014424 NCBI chr10:53,800,126...53,814,963
Ensembl chr10:53,805,535...53,814,431
JBrowse link
G Per2 period circadian regulator 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5014424|PMID:21680841)
UniProt
RGD
PMID:21680841 GO_REF:0000024 MGI:5014424 NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459
JBrowse link
G Phc1 polyhomeotic homolog 1 involved_in ISO (PMID:23418308) RGD PMID:23418308 NCBI chr 4:155,510,274...155,532,636
Ensembl chr 4:155,510,274...155,533,959
JBrowse link
G Phf10 PHD finger protein 10 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:55,952,249...55,968,994
Ensembl chr 1:55,952,253...55,969,038
JBrowse link
G Phf8 PHD finger protein 8 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:20,524,103...20,623,459
Ensembl chr  X:20,524,558...20,623,410
JBrowse link
G Pih1d1 PIH1 domain containing 1 involved_in ISO (PMID:22368283) RGD PMID:22368283 NCBI chr 1:95,639,597...95,645,295
Ensembl chr 1:95,639,592...95,645,290
JBrowse link
G Pkn1 protein kinase N1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:24,442,130...24,470,107
Ensembl chr19:24,442,122...24,470,107
JBrowse link
G Pole3 DNA polymerase epsilon 3, accessory subunit involved_in ISO (PMID:10880450) RGD PMID:10880450 NCBI chr 5:75,973,941...75,977,175
Ensembl chr 5:75,974,717...75,977,231
JBrowse link
G Prdm13 PR/SET domain 13 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000108
(MGI:5553208|PMID:24370451)
GOC
RGD
PMID:24370451 GO_REF:0000108 MGI:5553208 NCBI chr 5:35,220,815...35,233,641
Ensembl chr 5:35,225,435...35,232,881
JBrowse link
G Prdm2 PR/SET domain 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:155,421,066...155,531,884
Ensembl chr 5:155,422,134...155,531,825
JBrowse link
G Prdm6 PR/SET domain 6 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr18:46,904,115...47,008,482
Ensembl chr18:46,904,127...47,007,823
JBrowse link
G Prdm8 PR/SET domain 8 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:11,403,202...11,424,059
Ensembl chr14:11,404,407...11,410,993
JBrowse link
G Prdm9 PR/SET domain 9 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:56,505,579...56,525,726
Ensembl chr 1:56,505,579...56,525,652
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
JBrowse link
G Prkca protein kinase C, alpha involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:92,889,390...93,288,013
Ensembl chr10:92,894,012...93,288,012
JBrowse link
G Prkcb protein kinase C, beta involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:176,832,173...177,163,539
Ensembl chr 1:176,832,226...177,163,536
JBrowse link
G Prmt1 protein arginine methyltransferase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:95,458,853...95,468,176
Ensembl chr 1:95,458,850...95,468,345
JBrowse link
G Prmt2 protein arginine methyltransferase 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:12,394,748...12,420,643
Ensembl chr20:12,394,798...12,420,643
JBrowse link
G Prmt5 protein arginine methyltransferase 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:27,968,893...27,978,291
Ensembl chr15:27,968,910...27,978,296
JBrowse link
G Prmt8 protein arginine methyltransferase 8 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:160,535,813...160,618,193
Ensembl chr 4:160,535,813...160,617,930
JBrowse link
G Psip1 PC4 and SRSF1 interacting protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:97,847,010...97,879,280
Ensembl chr 5:97,847,015...97,879,257
JBrowse link
G Pwwp2a PWWP domain containing 2A involved_in ISO (PMID:30327463)
(MGI:6709552|PMID:30228260), (MGI:6867108|PMID:33235983)
RGD PMID:30228260 PMID:30327463 PMID:33235983 MGI:6709552 MGI:6867108 NCBI chr10:28,155,509...28,195,255
Ensembl chr10:28,155,605...28,194,308
JBrowse link
G Pwwp2b PWWP domain containing 2B involved_in ISO (MGI:6709552|PMID:30228260) RGD PMID:30228260 MGI:6709552 NCBI chr 1:194,040,395...194,059,979
Ensembl chr 1:194,041,341...194,059,958
JBrowse link
G Rad54b RAD54 homolog B involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:25,030,885...25,104,616
Ensembl chr 5:25,032,066...25,104,616
JBrowse link
G Rad54l RAD54 like involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:129,575,431...129,605,100
Ensembl chr 5:129,575,378...129,605,070
JBrowse link
G Rad54l2 RAD54 like 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:107,324,945...107,427,033
Ensembl chr 8:107,327,420...107,427,106
JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor involved_in ISO
IBA
(PMID:14609955), (PMID:9790534)
PMID:21873635
RGD PMID:9790534 PMID:14609955 PMID:21873635 RGD:13792537 NCBI chr 5:141,655,863...141,675,157
Ensembl chr 5:141,638,421...141,675,284
JBrowse link
G Rbbp7 RB binding protein 7, chromatin remodeling factor involved_in ISO
IBA
(PMID:14609955), (PMID:9790534)
PMID:21873635
RGD PMID:9790534 PMID:14609955 PMID:21873635 RGD:13792537 NCBI chr  X:31,913,080...31,931,245
Ensembl chr  X:31,913,081...31,931,226
JBrowse link
G Rere arginine-glutamic acid dipeptide repeats acts_upstream_of_or_within ISO PR:O09106 (MGI:2683041|PMID:14645126) RGD PMID:14645126 MGI:2683041 NCBI chr 5:160,765,855...161,097,678
Ensembl chr 5:160,765,934...161,097,677
JBrowse link
G Rest RE1-silencing transcription factor involved_in IMP PMID:22371606 UniProt PMID:22371606 RGD:14397566 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354
JBrowse link
G RGD1310212 similar to KIAA1111-like protein involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:12,194,437...12,200,509
Ensembl chr 7:12,194,441...12,200,446
JBrowse link
G RGD1561318 similar to SET domain-containing protein involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:92,178,344...92,180,517
Ensembl chr  X:92,178,016...92,179,731
JBrowse link
G RGD1563620 similar to retinoblastoma binding protein 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:153,958,955...153,961,336
Ensembl chr 2:153,958,955...153,960,757
JBrowse link
G RGD735065 similar to GI:13385412-like protein splice form I involved_in ISO
IEA
ISS
(PMID:23460338)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:23460338 GO_REF:0000024 GO_REF:0000107 NCBI chr20:7,322,483...7,362,054
Ensembl chr20:7,322,442...7,357,612
JBrowse link
G Ring1 ring finger protein 1 involved_in ISO
IEA
(PMID:16943429)
GO_REF:0000107
RGD
Ensembl
PMID:16943429 GO_REF:0000107 NCBI chr20:4,830,120...4,833,623
Ensembl chr20:4,830,053...4,833,620
JBrowse link
G Riox1 ribosomal oxygenase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:103,579,642...103,582,260
Ensembl chr 6:103,579,642...103,582,250
JBrowse link
G Riox2 ribosomal oxygenase 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:40,861,365...40,884,782
Ensembl chr11:40,860,774...40,884,574
JBrowse link
G Rnf2 ring finger protein 2 involved_in ISO (PMID:16943429) RGD PMID:16943429 NCBI chr13:63,553,964...63,584,047
Ensembl chr13:63,554,862...63,583,099
JBrowse link
G Rnf20 ring finger protein 20 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000108
(MGI:5319125|PMID:22252316)
GOC
RGD
PMID:22252316 GO_REF:0000108 MGI:5319125 NCBI chr 5:63,976,063...64,001,754
Ensembl chr 5:63,976,045...64,001,754
JBrowse link
G Rps6ka4 ribosomal protein S6 kinase A4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:204,021,805...204,032,781
Ensembl chr 1:204,021,806...204,032,761
JBrowse link
G Rps6ka5 ribosomal protein S6 kinase A5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:119,828,823...120,006,190
Ensembl chr 6:119,828,846...120,006,224
JBrowse link
G Rsbn1 round spermatid basic protein 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:191,416,631...191,470,711
Ensembl chr 2:191,416,631...191,470,711
JBrowse link
G Rsf1 remodeling and spacing factor 1 involved_in ISO (PMID:9836642) RGD PMID:9836642 NCBI chr 1:151,892,055...152,015,089
Ensembl chr 1:151,892,434...152,009,051
JBrowse link
G Ruvbl1 RuvB-like AAA ATPase 1 involved_in ISO
IBA
(PMID:21303910)
PMID:21873635
RGD PMID:21303910 PMID:21873635 RGD:13792537 NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384
JBrowse link
G Ruvbl1-ps1 RuvB-like AAA ATPase 1, pseudogene 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:1,640,138...1,641,886
Ensembl chr  X:1,640,300...1,641,811
JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 involved_in ISO
IBA
(PMID:21303910), (PMID:23637611)
PMID:21873635
RGD PMID:21303910 PMID:23637611 PMID:21873635 RGD:13792537 NCBI chr 1:95,902,014...95,915,364
Ensembl chr 1:95,901,701...95,915,342
JBrowse link
G Rybp RING1 and YY1 binding protein involved_in ISO (PMID:16943429) RGD PMID:16943429 NCBI chr 4:132,876,361...132,927,580
NCBI chr 4:132,876,260...132,929,075
Ensembl chr 4:132,876,361...132,928,316
JBrowse link
G Satb1 SATB homeobox 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2386676 (MGI:5295905|PMID:21930775)
RGD PMID:21930775 PMID:21873635 MGI:5295905, RGD:13792537 NCBI chr 9:4,677,817...4,773,061
Ensembl chr 9:4,680,920...4,753,251
JBrowse link
G Satb2 SATB homeobox 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3793380|PMID:18255031)
RGD PMID:18255031 PMID:21873635 MGI:3793380, RGD:13792537 NCBI chr 9:58,348,027...58,534,256
Ensembl chr 9:58,350,246...58,530,707
JBrowse link
G Scmh1 Scm polycomb group protein homolog 1 acts_upstream_of_or_within ISO MGI:3706668 (MGI:3703453|PMID:17215307) RGD PMID:17215307 MGI:3703453 NCBI chr 5:133,991,167...134,115,893
Ensembl chr 5:133,990,520...134,122,105
JBrowse link
G Setbp1 SET binding protein 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr18:72,190,542...72,551,272
Ensembl chr18:72,191,035...72,552,556
JBrowse link
G Setd1a SET domain containing 1A, histone lysine methyltransferase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:182,386,197...182,411,695
Ensembl chr 1:182,388,060...182,411,090
JBrowse link
G Setd1b SET domain containing 1B, histone lysine methyltransferase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:33,395,963...33,421,671
Ensembl chr12:33,396,120...33,426,934
JBrowse link
G Setd3 SET domain containing 3, actin histidine methyltransferase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:127,023,058...127,090,020
Ensembl chr 6:127,023,058...127,090,008
JBrowse link
G Setd4 SET domain containing 4 involved_in IEA
ISO
GO_REF:0000108
GO_REF:0000107
(MGI:6694359|PMID:31376731)
GOC
Ensembl
RGD
PMID:31376731 GO_REF:0000107 GO_REF:0000108 MGI:6694359 NCBI chr11:32,829,509...32,859,162
Ensembl chr11:32,838,063...32,858,243
JBrowse link
G Setd5 SET domain containing 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:146,217,172...146,294,896
Ensembl chr 4:146,217,180...146,294,894
JBrowse link
G Setmar SET domain and mariner transposase fusion gene involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:141,046,058...141,058,183
Ensembl chr 4:141,046,069...141,058,197
JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO (MGI:5014424|PMID:21680841) RGD PMID:21680841 MGI:5014424 NCBI chr 5:139,338,034...139,353,476
Ensembl chr 5:139,338,075...139,353,472
JBrowse link
G Sirt1 sirtuin 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Sirt2 sirtuin 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
JBrowse link
G Sirt3 sirtuin 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:195,942,066...195,964,472
Ensembl chr 1:195,942,073...195,964,808
JBrowse link
G Sirt4 sirtuin 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:41,125,533...41,139,440
Ensembl chr12:41,131,262...41,139,439
JBrowse link
G Skp1 S-phase kinase-associated protein 1 involved_in ISO
IEA
(PMID:16943429)
GO_REF:0000107
RGD
Ensembl
PMID:16943429 GO_REF:0000107 NCBI chr10:36,401,987...36,417,066
Ensembl chr10:36,402,153...36,417,388
JBrowse link
G Slfn13 schlafen family member 13 involved_in ISO (PMID:29395061) RGD PMID:29395061 NCBI chr10:67,909,105...67,955,912
Ensembl chr10:67,909,106...67,925,383
JBrowse link
G Slk STE20-like kinase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:246,473,712...246,529,643
Ensembl chr 1:246,473,712...246,526,530
JBrowse link
G Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 involved_in ISO (PMID:14609955), (PMID:15640247) RGD PMID:14609955 PMID:15640247 NCBI chr  X:126,980,201...127,066,385
Ensembl chr  X:126,994,947...127,066,347
JBrowse link
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 involved_in IEA GO_REF:0000117
GO_REF:0000002
UniProt
InterPro
GO_REF:0000002 GO_REF:0000117 NCBI chr 1:224,191,125...224,358,640
Ensembl chr 1:224,191,125...224,358,684
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 involved_in
acts_upstream_of_or_within
IDA
IEA
ISO
GO_REF:0000117
MGI:3611933 (MGI:3610843|PMID:16287714)
(PMID:10943845), (PMID:11726552), (PMID:22368283)
UniProt
RGD
PMID:10943845 PMID:11726552 PMID:16287714 PMID:22368283 PMID:9001244 GO_REF:0000117 MGI:3610843, RGD:634124 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 acts_upstream_of_or_within
involved_in
ISO MGI:2151152 (MGI:2149896|PMID:11532953), (MGI:2179578|PMID:11980720)
(PMID:10880450), (PMID:15543136), (PMID:9836642)
RGD PMID:9836642 PMID:10880450 PMID:11532953 PMID:11980720 PMID:15543136 MGI:2149896 MGI:2179578 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
JBrowse link
G Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1` involved_in ISO
IEA
(PMID:22960744)
GO_REF:0000108
RGD
GOC
PMID:22960744 GO_REF:0000108 NCBI chr 4:94,311,441...94,379,184
Ensembl chr 4:94,311,489...94,372,563
JBrowse link
G Smarcal1 Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:74,239,718...74,286,156
Ensembl chr 9:74,240,241...74,286,146
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 involved_in ISO
IBA
(PMID:11726552), (PMID:22368283)
PMID:21873635
RGD PMID:11726552 PMID:22368283 PMID:21873635 RGD:13792537 NCBI chr20:12,741,164...12,763,616
Ensembl chr20:12,741,477...12,763,620
JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 involved_in ISO (PMID:10078207), (PMID:11018012), (PMID:11726552) RGD PMID:10078207 PMID:11018012 PMID:11726552 NCBI chr 8:110,111,097...110,214,727
Ensembl chr 8:110,111,122...110,214,720
JBrowse link
G Smarcc2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 involved_in ISO (PMID:10078207), (PMID:11018012), (PMID:11726552) RGD PMID:10078207 PMID:11018012 PMID:11726552 NCBI chr 7:881,844...910,090
Ensembl chr 7:881,421...909,978
JBrowse link
G Smarcd1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 involved_in ISO (PMID:11726552), (PMID:12917342) RGD PMID:11726552 PMID:12917342 NCBI chr 7:130,829,783...130,840,323
Ensembl chr 7:130,829,768...130,840,323
JBrowse link
G Smarcd2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 involved_in ISO (PMID:11726552) RGD PMID:11726552 NCBI chr10:91,193,752...91,202,817
Ensembl chr10:91,193,752...91,204,341
JBrowse link
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 involved_in ISO (PMID:11726552) RGD PMID:11726552 NCBI chr 4:10,548,693...10,580,334
Ensembl chr 4:10,548,751...10,580,326
JBrowse link
G Smarce1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 involved_in ISO (PMID:11726552) RGD PMID:11726552 NCBI chr10:84,159,270...84,180,547
Ensembl chr10:84,159,275...84,179,989
JBrowse link
G Smyd1 SET and MYND domain containing 1 acts_upstream_of_or_within ISO PR:O09106 (MGI:2178868|PMID:11923873) RGD PMID:11923873 MGI:2178868 NCBI chr 4:103,195,330...103,252,989
Ensembl chr 4:103,200,322...103,311,766
JBrowse link
G Smyd2 SET and MYND domain containing 2 acts_upstream_of_or_within ISO (MGI:5447149|PMID:22862948) RGD PMID:22862948 MGI:5447149 NCBI chr13:101,425,270...101,466,576
Ensembl chr13:101,425,273...101,466,576
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISO
ISS
(PMID:20484372)
GO_REF:0000024
RGD
UniProt
PMID:20484372 GO_REF:0000024 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Srcap Snf2-related CREBBP activator protein involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:182,123,562...182,172,643
Ensembl chr 1:182,118,416...182,176,610
JBrowse link
G Suds3 SDS3 homolog, SIN3A corepressor complex component involved_in ISO (PMID:21239494) RGD PMID:21239494 NCBI chr12:39,477,181...39,499,633
Ensembl chr12:39,477,568...39,499,628
JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase acts_upstream_of_or_within ISO MGI:2445449 (MGI:5913114|PMID:23695662) RGD PMID:23695662 MGI:5913114 NCBI chr  X:14,421,028...14,434,216
Ensembl chr  X:14,421,109...14,433,982
JBrowse link
G Suv39h1-ps1 SUV39H1 histone lysine methyltransferase, pseudogene 1 acts_upstream_of_or_within ISO MGI:2445449 (MGI:5913114|PMID:23695662) RGD PMID:23695662 MGI:5913114 NCBI chr  X:141,793,695...141,795,558 JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase involved_in ISO (PMID:10949293) RGD PMID:10949293 NCBI chr17:74,756,290...74,775,332
Ensembl chr17:74,756,306...74,775,332
JBrowse link
G Tada2a transcriptional adaptor 2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:68,966,502...69,014,149
Ensembl chr10:68,966,502...69,014,105
JBrowse link
G Tada2b transcriptional adaptor 2B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:74,279,286...74,290,758
Ensembl chr14:74,279,217...74,290,755
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:66,640,915...66,716,543
Ensembl chr  X:66,640,982...66,716,543
JBrowse link
G Taf10 TATA-box binding protein associated factor 10 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:160,095,108...160,096,401
Ensembl chr 1:160,095,108...160,096,376
JBrowse link
G Taf9 TATA-box binding protein associated factor 9 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:31,794,316...31,798,324
Ensembl chr 2:31,794,142...31,798,769
JBrowse link
G Tbr1 T-box brain transcription factor 1 involved_in ISO (MGI:6220563|PMID:30186101) RGD PMID:30186101 MGI:6220563 NCBI chr 3:46,350,237...46,368,397
Ensembl chr 3:46,351,213...46,361,041
JBrowse link
G Tcf3 transcription factor 3 acts_upstream_of_or_within ISO MGI:2178112 (MGI:3615721|PMID:16428437) RGD PMID:16428437 MGI:3615721 NCBI chr 7:9,280,571...9,302,315
Ensembl chr 7:9,280,571...9,302,314
JBrowse link
G Tet1 tet methylcytosine dioxygenase 1 involved_in ISO (PMID:25284789) RGD PMID:25284789 NCBI chr20:25,761,042...25,840,926
Ensembl chr20:25,768,120...25,833,052
JBrowse link
G Tfpt TCF3 fusion partner involved_in ISO
IEA
(PMID:21303910)
GO_REF:0000107
RGD
Ensembl
PMID:21303910 GO_REF:0000107 NCBI chr 1:65,587,855...65,597,407
Ensembl chr 1:65,582,359...65,611,689
JBrowse link
G Tgm2 transglutaminase 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:146,772,684...146,801,924
Ensembl chr 3:146,772,687...146,801,981
JBrowse link
G Tnp1 transition protein 1 involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:12743712)
UniProt
RGD
PMID:12743712 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 9:74,594,463...74,595,072
Ensembl chr 9:74,594,466...74,595,274
JBrowse link
G Top1 DNA topoisomerase I involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:22904072)
UniProt
Ensembl
RGD
PMID:22904072 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:149,293,658...149,375,405
Ensembl chr 3:149,293,403...149,376,623
JBrowse link
G Tp63 tumor protein p63 acts_upstream_of_or_within ISO MGI:1934580 (MGI:5295905|PMID:21930775) RGD PMID:21930775 MGI:5295905 NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398
JBrowse link
G Ttf1 transcription termination factor 1 acts_upstream_of_or_within ISO (MGI:85982|PMID:9049305) RGD PMID:9049305 MGI:85982 NCBI chr 3:12,384,626...12,409,257
Ensembl chr 3:12,384,655...12,409,257
JBrowse link
G Ttf2 transcription termination factor 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:188,366,321...188,397,750
Ensembl chr 2:188,366,331...188,397,689
JBrowse link
G Tti1 TELO2 interacting protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:146,639,048...146,682,945
Ensembl chr 3:146,639,054...146,682,847
JBrowse link
G Ube2a ubiquitin-conjugating enzyme E2A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:116,114,339...116,125,076
Ensembl chr  X:116,113,875...116,125,070
JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (PMID:21303910) RGD PMID:21303910 NCBI chr13:55,520,722...55,556,503
Ensembl chr13:55,520,729...55,556,502
JBrowse link
G Usp16 ubiquitin specific peptidase 16 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000108
(MGI:5527017|PMID:24034696)
GOC
RGD
PMID:24034696 GO_REF:0000108 MGI:5527017 NCBI chr11:26,681,359...26,711,313
Ensembl chr11:26,681,414...26,710,539
JBrowse link
G Usp22 ubiquitin specific peptidase 22 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:45,831,226...45,855,325
Ensembl chr10:45,828,622...45,855,497
JBrowse link
G Usp49 ubiquitin specific peptidase 49 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:13,305,640...13,366,132
Ensembl chr 9:13,308,178...13,366,132
JBrowse link
G Usp51 ubiquitin specific peptidase 51 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:18,374,940...18,381,472
Ensembl chr  X:18,376,930...18,379,888
JBrowse link
G Vrk1 VRK serine/threonine kinase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:124,914,770...124,981,508
Ensembl chr 6:124,914,855...124,981,436
JBrowse link
G Wac WW domain containing adaptor with coiled-coil involved_in ISO (PMID:21329877) RGD PMID:21329877 NCBI chr17:55,922,686...55,984,286
Ensembl chr17:55,923,123...55,982,301
JBrowse link
G Yeats2 YEATS domain containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:80,743,134...80,829,253
Ensembl chr11:80,743,134...80,829,208
JBrowse link
G Yeats4 YEATS domain containing 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:52,858,313...52,865,454
Ensembl chr 7:52,858,305...52,865,635
JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:21303910) RGD PMID:21303910 NCBI chr 6:127,706,739...127,731,907
Ensembl chr 6:127,707,596...127,732,747
JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (PMID:24657165) RGD PMID:24657165 NCBI chr 6:95,096,838...95,125,811
Ensembl chr 6:95,096,387...95,118,996
JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7a involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:26816381)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:26816381 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:8,561,015...8,578,243
Ensembl chr 7:8,563,779...8,576,539
JBrowse link
G Zfp110 zinc finger protein 110 involved_in ISO (PMID:27029610) RGD PMID:27029610 NCBI chr 1:73,445,303...73,461,112
Ensembl chr 1:73,445,336...73,461,086
JBrowse link
G Zfp827 zinc finger protein 827 involved_in ISO (PMID:25150861) RGD PMID:25150861 NCBI chr19:28,720,568...28,887,381
Ensembl chr19:28,721,021...28,887,191
JBrowse link
G Znhit1 zinc finger, HIT-type containing 1 involved_in ISO (MGI:6106288|PMID:29138493) RGD PMID:29138493 MGI:6106288 NCBI chr12:19,686,606...19,692,880
Ensembl chr12:19,686,148...19,692,880
JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr13:39,440,653...39,595,782
Ensembl chr13:39,440,889...39,595,670
JBrowse link
DNA methylation-dependent heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt1 DNA methyltransferase 1 involved_in ISO
IEA
(MGI:3687778|PMID:10615135)
GO_REF:0000107
RGD
Ensembl
PMID:10615135 GO_REF:0000107 MGI:3687778 NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha acts_upstream_of_or_within ISO MGI:1261819 (MGI:3611125|PMID:16322236), (MGI:3768461|PMID:17938196) RGD PMID:16322236 PMID:17938196 MGI:3611125 MGI:3768461 NCBI chr 6:26,791,517...26,902,161
Ensembl chr 6:26,822,609...26,896,687
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta acts_upstream_of_or_within ISO MGI:1261827 (MGI:3768461|PMID:17938196) RGD PMID:17938196 MGI:3768461 NCBI chr 3:142,130,592...142,169,124
Ensembl chr 3:142,130,592...142,169,124
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO UniProtKB:Q9UBB5 (PMID:23770133) RGD PMID:23770133 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hells helicase, lymphoid specific involved_in IBA
ISO
PMID:21873635
(MGI:3573964|PMID:15647320)
RGD PMID:15647320 PMID:21873635 MGI:3573964, RGD:13792537 NCBI chr 1:236,701,704...236,748,239
Ensembl chr 1:236,701,758...236,746,844
JBrowse link
G Kmt2b lysine methyltransferase 2B acts_upstream_of_or_within ISO MGI:3056522|MGI:3623309 (MGI:4849597|PMID:20808952) RGD PMID:20808952 MGI:4849597 NCBI chr 1:85,821,700...85,840,987
Ensembl chr 1:85,821,753...85,841,326
JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 involved_in ISO
IBA
UniProtKB:Q13547 (PMID:23770133)
PMID:21873635
RGD PMID:23770133 PMID:21873635 RGD:13792537 NCBI chr18:64,174,002...64,240,795
Ensembl chr18:64,174,002...64,240,794
JBrowse link
G Mbd3 methyl-CpG binding domain protein 3 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3611125|PMID:16322236)
PMID:21873635
RGD PMID:16322236 PMID:21873635 MGI:3611125, RGD:13792537 NCBI chr 7:9,312,961...9,320,166
Ensembl chr 7:9,313,098...9,320,165
JBrowse link
G Mbd3l1 methyl-CpG binding domain protein 3-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:16,150,539...16,160,463
Ensembl chr 8:16,153,472...16,160,404
JBrowse link
G Mbd3l2 methyl-CpG binding domain protein 3-like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:15,607,477...15,614,046
Ensembl chr 8:15,611,214...15,612,563
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (MGI:3611125|PMID:16322236) RGD PMID:16322236 MGI:3611125 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
JBrowse link
G Tex15 testis expressed 15, meiosis and synapsis associated acts_upstream_of_or_within_positive_effect ISO (MGI:6434559|PMID:32381626) RGD PMID:32381626 MGI:6434559 NCBI chr16:58,598,991...58,659,005
Ensembl chr16:58,598,989...58,658,467
JBrowse link
DNA recombinase assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmc1 DNA meiotic recombinase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:111,124,888...111,167,465
Ensembl chr 7:111,124,888...111,167,952
JBrowse link
G Rad51 RAD51 recombinase involved_in ISO
IBA
(PMID:26681308)
PMID:21873635
RGD PMID:26681308 PMID:21873635 RGD:13792537 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035
JBrowse link
G Rad52 RAD52 homolog, DNA repair protein involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:153,106,062...153,128,598
Ensembl chr 4:153,106,062...153,128,207
JBrowse link
DNA repair-dependent chromatin remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apbb1 amyloid beta precursor protein binding family B member 1 involved_in IMP PMID:19282473 UniProt PMID:19282473 RGD:8553580 NCBI chr 1:159,896,889...159,920,505
Ensembl chr 1:159,896,880...159,920,627
JBrowse link
G Aplf aprataxin and PNKP like factor involved_in ISO (PMID:21211722), (PMID:29905837) RGD PMID:21211722 PMID:29905837 NCBI chr 4:120,070,471...120,122,656
Ensembl chr 4:120,070,471...120,122,633
JBrowse link
G Asf1a anti-silencing function 1A histone chaperone involved_in ISO (PMID:29478807) RGD PMID:29478807 NCBI chr20:32,893,962...32,908,808
Ensembl chr20:32,893,573...32,908,808
JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 involved_in ISO
ISS
(PMID:19261746)
GO_REF:0000024
RGD
UniProt
PMID:19261746 GO_REF:0000024 NCBI chr16:18,068,830...18,074,938
Ensembl chr16:18,068,884...18,074,923
JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 involved_in ISO
ISS
(PMID:19202061), (PMID:19261746)
GO_REF:0000024
RGD
UniProt
PMID:19202061 PMID:19261746 GO_REF:0000024 NCBI chr 9:1,986,942...1,989,484
Ensembl chr 9:1,986,575...1,991,080
JBrowse link
G Dtx3l deltex E3 ubiquitin ligase 3L involved_in ISO (PMID:19818714) RGD PMID:19818714 NCBI chr11:64,814,926...64,824,538
Ensembl chr11:64,814,926...64,824,538
JBrowse link
G Hdgfl2 HDGF like 2 involved_in ISO
IEA
(PMID:26721387)
GO_REF:0000107
RGD
Ensembl
PMID:26721387 GO_REF:0000107 NCBI chr 9:909,581...929,195
Ensembl chr 9:909,614...929,186
JBrowse link
G Hpf1 histone PARylation factor 1 involved_in ISO (PMID:32939087) RGD PMID:32939087 NCBI chr16:29,203,749...29,219,651
Ensembl chr16:29,183,256...29,219,716
JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO
IEA
(PMID:10966108)
GO_REF:0000107
RGD
Ensembl
PMID:10966108 GO_REF:0000107 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458
JBrowse link
G Kdm1a lysine demethylase 1A acts_upstream_of_or_within
involved_in
ISO (MGI:5562615|PMID:24217620)
(PMID:24217620)
RGD PMID:24217620 MGI:5562615 NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
JBrowse link
G Parp2 poly (ADP-ribose) polymerase 2 involved_in ISO (PMID:32939087) RGD PMID:32939087 NCBI chr15:24,034,069...24,044,340
Ensembl chr15:24,034,106...24,044,338
JBrowse link
G Phf1 PHD finger protein 1 involved_in ISO (PMID:23142980) RGD PMID:23142980 NCBI chr20:5,017,765...5,022,872
Ensembl chr20:5,017,893...5,022,871
JBrowse link
G Rnf168 ring finger protein 168 involved_in ISO
IEA
ISS
(PMID:19203578), (PMID:19500350), (PMID:22980979), (PMID:23760478)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:19203578 PMID:19500350 PMID:22980979 PMID:23760478 GO_REF:0000024 GO_REF:0000107 NCBI chr11:68,486,313...68,508,296
Ensembl chr11:68,486,321...68,508,277
JBrowse link
G Rnf8 ring finger protein 8 involved_in ISO
ISS
(PMID:18001824), (PMID:18001825), (PMID:22980979)
GO_REF:0000024
RGD
UniProt
PMID:18001824 PMID:18001825 PMID:22980979 GO_REF:0000024 NCBI chr20:7,682,258...7,710,448
Ensembl chr20:7,682,322...7,708,491
JBrowse link
G Sirt6 sirtuin 6 involved_in IEA
ISO
GO_REF:0000107
(MGI:6694658|PMID:32584788)
Ensembl
RGD
PMID:32584788 GO_REF:0000107 MGI:6694658 NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914
JBrowse link
G Sirt7 sirtuin 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:5789069|PMID:27225932)
(PMID:27436229)
UniProt
RGD
PMID:27225932 PMID:27436229 GO_REF:0000024 MGI:5789069 NCBI chr10:105,896,476...105,903,301
Ensembl chr10:105,896,476...105,903,172
JBrowse link
G Trip12 thyroid hormone receptor interactor 12 involved_in ISS
ISO
GO_REF:0000024
(PMID:22884692)
UniProt
RGD
PMID:22884692 GO_REF:0000024 NCBI chr 9:85,916,691...86,043,312
Ensembl chr 9:85,916,691...86,051,403
JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:22884692)
UniProt
Ensembl
RGD
PMID:22884692 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:69,116,758...69,224,490
Ensembl chr 7:69,116,761...69,224,903
JBrowse link
G Usp3 ubiquitin specific peptidase 3 involved_in ISO (PMID:17980597) RGD PMID:17980597 NCBI chr 8:67,078,249...67,154,109
Ensembl chr 8:67,079,927...67,154,111
JBrowse link
DNA replication preinitiation complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdt1 chromatin licensing and DNA replication factor 1 involved_in IBA
ISO
PMID:21873635
(PMID:11125146)
RGD PMID:11125146 PMID:21873635 RGD:13792537 NCBI chr19:50,620,713...50,625,659
Ensembl chr19:50,620,713...50,625,659
JBrowse link
G Gmnn geminin, DNA replication inhibitor involved_in ISO (PMID:11125146) RGD PMID:11125146 NCBI chr17:40,301,771...40,310,054
Ensembl chr17:40,301,808...40,310,054
JBrowse link
DNA replication-dependent chromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asf1a anti-silencing function 1A histone chaperone involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:32,893,962...32,908,808
Ensembl chr20:32,893,573...32,908,808
JBrowse link
G Asf1b anti-silencing function 1B histone chaperone involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:24,181,024...24,195,604
Ensembl chr19:24,181,028...24,195,549
JBrowse link
G Chaf1a chromatin assembly factor 1 subunit A involved_in ISO (PMID:8858152), (PMID:9614144) RGD PMID:8858152 PMID:9614144 NCBI chr 9:873,953...900,701
Ensembl chr 9:874,051...900,654
JBrowse link
G Chaf1b chromatin assembly factor 1 subunit B involved_in ISO (PMID:8858152), (PMID:9614144) RGD PMID:8858152 PMID:9614144 NCBI chr11:33,200,894...33,221,076
Ensembl chr11:33,200,981...33,221,070
JBrowse link
G Nasp nuclear autoantigenic sperm protein acts_upstream_of_or_within
involved_in
ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:3693383|PMID:12509435)
(MGI:3694318|PMID:16728391)
UniProt
RGD
PMID:12509435 PMID:16728391 PMID:21873635 GO_REF:0000024 MGI:3693383 MGI:3694318, RGD:13792537 NCBI chr 5:130,057,363...130,083,003
Ensembl chr 5:130,057,363...130,082,928
JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor involved_in ISO (PMID:8858152), (PMID:9614144) RGD PMID:8858152 PMID:9614144 NCBI chr 5:141,655,863...141,675,157
Ensembl chr 5:141,638,421...141,675,284
JBrowse link
DNA replication-dependent chromatin disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ing4 inhibitor of growth family, member 4 involved_in ISO (PMID:16387653) RGD PMID:16387653 NCBI chr 4:157,841,882...157,850,519
Ensembl chr 4:157,841,951...157,850,265
JBrowse link
G Ing5 inhibitor of growth family, member 5 involved_in ISO (PMID:16387653) RGD PMID:16387653 NCBI chr 9:94,326,919...94,344,220
Ensembl chr 9:94,326,548...94,344,220
JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in ISS
ISO
GO_REF:0000024
(PMID:16387653)
UniProt
RGD
PMID:16387653 GO_REF:0000024 NCBI chr10:80,221,519...80,255,590
Ensembl chr10:80,221,524...80,255,567
JBrowse link
DNA-templated transcription open complex formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Taf8 TATA-box binding protein associated factor 8 acts_upstream_of_or_within ISO (PMID:14580349) RGD PMID:14580349 NCBI chr 9:13,491,892...13,511,713
Ensembl chr 9:13,491,937...13,511,717
JBrowse link
dosage compensation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Macroh2a1 macroH2A.1 histone acts_upstream_of_or_within ISO (PMID:15053874) RGD PMID:15053874 NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072
JBrowse link
G Macroh2a2 macroH2A.2 histone acts_upstream_of_or_within ISO (PMID:11331621) RGD PMID:11331621 NCBI chr20:29,678,194...29,727,867
Ensembl chr20:29,678,222...29,727,891
JBrowse link
dosage compensation by inactivation of X chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca1 BRCA1, DNA repair associated involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
(MGI:2389513|PMID:12419249)
GO_REF:0000107
RGD
Ensembl
PMID:12419249 PMID:21873635 GO_REF:0000107 MGI:2389513, RGD:13792537 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304
JBrowse link
G Eif1 eukaryotic translation initiation factor 1 acts_upstream_of_or_within ISO (MGI:3694307|PMID:16789828) RGD PMID:16789828 MGI:3694307 NCBI chr10:85,246,751...85,248,842
Ensembl chr10:85,246,764...85,427,327
JBrowse link
G Exosc10 exosome component 10 acts_upstream_of_or_within ISO (MGI:3694307|PMID:16789828) RGD PMID:16789828 MGI:3694307 NCBI chr 5:158,995,318...159,018,946
Ensembl chr 5:158,995,313...159,018,940
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (MGI:4831049|PMID:20833368) RGD PMID:20833368 MGI:4831049 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588
JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 acts_upstream_of_or_within ISO MGI:5888989 (MGI:5888829|PMID:27892467) RGD PMID:27892467 MGI:5888829 NCBI chr17:19,777,487...19,957,696
Ensembl chr17:19,777,266...19,955,690
JBrowse link
G Lrif1 ligand dependent nuclear receptor interacting factor 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:23542155)
UniProt
Ensembl
RGD
PMID:23542155 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:194,231,397...194,322,489
Ensembl chr 2:194,230,951...194,322,483
JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:27602518) RGD PMID:27602518 NCBI chr15:25,002,505...25,014,097
Ensembl chr15:25,003,172...25,014,041
JBrowse link
G Rbm15 RNA binding motif protein 15 involved_in ISO (PMID:27602518) RGD PMID:27602518 NCBI chr 2:194,945,717...194,954,523
Ensembl chr 2:194,945,974...194,954,703
JBrowse link
G Rbm15b RNA binding motif protein 15B involved_in ISO (PMID:27602518) RGD PMID:27602518 NCBI chr 8:107,543,542...107,548,195
Ensembl chr 8:107,525,898...107,551,696
JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in
acts_upstream_of_or_within
ISO (PMID:23542155)
MGI:3586547 (MGI:3821390|PMID:18425126), (MGI:5532809|PMID:23754746)
RGD PMID:18425126 PMID:23542155 PMID:23754746 MGI:3821390 MGI:5532809 NCBI chr 9:111,243,445...111,387,272
Ensembl chr 9:111,247,702...111,349,665
JBrowse link
G Suz12 SUZ12 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO (MGI:5888829|PMID:27892467) RGD PMID:27892467 MGI:5888829 NCBI chr10:64,967,035...65,012,916
Ensembl chr10:64,966,967...65,012,738
JBrowse link
G Xist X inactive specific transcript acts_upstream_of_or_within ISO MGI:1336196|MGI:2445459|MGI:2445460 (MGI:2389513|PMID:12419249), (MGI:3582103|PMID:15992549), (MGI:5429141|PMID:22573614), (MGI:5581575|PMID:24613346), (MGI:5888829|PMID:27892467) RGD PMID:12419249 PMID:15992549 PMID:22573614 PMID:24613346 PMID:27892467 MGI:2389513 MGI:3582103 MGI:5429141 MGI:5581575 MGI:5888829 NCBI chr  X:68,474,987...68,492,500 JBrowse link
G Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in ISO
ISS
(PMID:27602518)
GO_REF:0000024
RGD
UniProt
PMID:27602518 GO_REF:0000024 NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028
JBrowse link
epigenetic programing of female pronucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dppa3 developmental pluripotency-associated 3 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5432962|PMID:22722204), (MGI:5447615|PMID:17143267), (MGI:5465527|PMID:21407207), (MGI:7277865|PMID:35541912)
GO_REF:0000024
RGD
UniProt
PMID:17143267 PMID:21407207 PMID:22722204 PMID:35541912 PMID:21873635 GO_REF:0000024 MGI:5432962 MGI:5447615 MGI:5465527 MGI:7277865, RGD:13792537 NCBI chr 4:155,851,461...155,854,845
Ensembl chr 4:155,815,296...155,854,861
JBrowse link
G Dppa3l1 developmental pluripotency associated 3-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:56,421,825...56,422,277
Ensembl chr 8:56,421,825...56,422,277
JBrowse link
G LOC120096627 developmental pluripotency-associated protein 3-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:69,456,777...69,460,079
Ensembl chr14:69,457,383...69,457,859
JBrowse link
G LOC120096971 developmental pluripotency-associated protein 3-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:27,224,329...27,232,700
Ensembl chr15:27,225,434...27,225,910
JBrowse link
G Zfp445 zinc finger protein 445 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:Q8C6P8 (MGI:6284037|PMID:30602440)
(PMID:30602440)
Ensembl
RGD
PMID:30602440 GO_REF:0000107 MGI:6284037 NCBI chr 8:122,453,175...122,473,355
Ensembl chr 8:122,454,328...122,473,286
JBrowse link
G Zfp57 zinc finger protein 57 involved_in ISO UniProtKB:Q8R2V3 (MGI:6284037|PMID:30602440) RGD PMID:30602440 MGI:6284037 NCBI chr20:1,521,323...1,534,884
Ensembl chr20:1,521,323...1,529,846
JBrowse link
epigenetic programing of male pronucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl23 methyltransferase 23, arginine acts_upstream_of_positive_effect
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(MGI:6103984|PMID:28930672)
UniProt
RGD
PMID:28930672 GO_REF:0000024 MGI:6103984 NCBI chr10:102,047,090...102,053,379
Ensembl chr10:102,047,314...102,051,977
JBrowse link
G Stpg4 sperm-tail PG-rich repeat containing 4 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:6103984|PMID:28930672)
(MGI:5762940|PMID:23560077)
RGD PMID:23560077 PMID:28930672 PMID:21873635 MGI:5762940 MGI:6103984, RGD:13792537 NCBI chr 6:7,108,827...7,158,519
Ensembl chr 6:7,108,869...7,151,390
JBrowse link
G Tet3 tet methylcytosine dioxygenase 3 involved_in ISO (MGI:5289702|PMID:21892189), (MGI:5432962|PMID:22722204), (MGI:5465527|PMID:21407207) RGD PMID:21407207 PMID:21892189 PMID:22722204 MGI:5289702 MGI:5432962 MGI:5465527 NCBI chr 4:115,867,412...115,964,433
Ensembl chr 4:115,871,265...115,964,193
JBrowse link
epigenetic programming in the zygotic pronuclei term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dcaf13 DDB1 and CUL4 associated factor 13 involved_in IEA
ISO
GO_REF:0000107
(PMID:30111536)
Ensembl
RGD
PMID:30111536 GO_REF:0000107 NCBI chr 7:70,160,983...70,196,142
Ensembl chr 7:70,160,941...70,196,142
JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:30111536)
Ensembl
RGD
PMID:30111536 GO_REF:0000107 NCBI chr 1:207,252,890...207,278,685
Ensembl chr 1:207,252,890...207,278,676
JBrowse link
G Mettl23 methyltransferase 23, arginine involved_in ISS
ISO
GO_REF:0000024
(MGI:6103984|PMID:28930672)
UniProt
RGD
PMID:28930672 GO_REF:0000024 MGI:6103984 NCBI chr10:102,047,090...102,053,379
Ensembl chr10:102,047,314...102,051,977
JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase involved_in ISO (PMID:30111536) RGD PMID:30111536 NCBI chr  X:14,421,028...14,434,216
Ensembl chr  X:14,421,109...14,433,982
JBrowse link
G Suv39h1-ps1 SUV39H1 histone lysine methyltransferase, pseudogene 1 involved_in ISO (PMID:30111536) RGD PMID:30111536 NCBI chr  X:141,793,695...141,795,558 JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase involved_in IEA
ISO
GO_REF:0000107
(PMID:30111536)
Ensembl
RGD
PMID:30111536 GO_REF:0000107 NCBI chr17:74,756,290...74,775,332
Ensembl chr17:74,756,306...74,775,332
JBrowse link
epigenetic regulation of embryonic gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt1 DNA methyltransferase 1 involved_in
acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect
IEA
ISO
GO_REF:0000107
MGI:1261819|MGI:1261827|MGI:1857157 (MGI:49689|PMID:1606615), (MGI:6151717|PMID:27841881)
MGI:3613486|MGI:5566775 (MGI:6270117|PMID:29117290)
Ensembl
RGD
PMID:1606615 PMID:27841881 PMID:29117290 GO_REF:0000107 MGI:49689 MGI:6151717 MGI:6270117 NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha involved_in
acts_upstream_of_or_within
ISO (MGI:3045942|PMID:15215868)
MGI:1261819|MGI:94912 (MGI:1347183|PMID:10555141), (MGI:5014027|PMID:20385583), (MGI:6151717|PMID:27841881)
RGD PMID:10555141 PMID:15215868 PMID:20385583 PMID:27841881 MGI:1347183 MGI:3045942 MGI:5014027 MGI:6151717 NCBI chr 6:26,791,517...26,902,161
Ensembl chr 6:26,822,609...26,896,687
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta involved_in
acts_upstream_of_or_within
ISO (MGI:3826753|PMID:18814855)
MGI:1261827|MGI:94912 (MGI:1347183|PMID:10555141), (MGI:6151717|PMID:27841881)
RGD PMID:10555141 PMID:18814855 PMID:27841881 MGI:1347183 MGI:3826753 MGI:6151717 NCBI chr 3:142,130,592...142,169,124
Ensembl chr 3:142,130,592...142,169,124
JBrowse link
G Trim28 tripartite motif-containing 28 acts_upstream_of_or_within ISO MGI:1928907 (MGI:5319411|PMID:22495301) RGD PMID:22495301 MGI:5319411 NCBI chr 1:73,652,441...73,659,388
Ensembl chr 1:73,652,709...73,659,380
JBrowse link
G Zdbf2 zinc finger, DBF-type containing 2 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:6161219 (MGI:6151717|PMID:27841881)
PMID:21873635
RGD PMID:27841881 PMID:21873635 MGI:6151717, RGD:13792537 NCBI chr 9:64,672,974...64,748,446
Ensembl chr 9:64,709,880...64,744,265
JBrowse link
G Zfp57 zinc finger protein 57 involved_in
acts_upstream_of_or_within
ISO
ISS
(PMID:18622393)
MGI:3826984 (MGI:6506156|PMID:33500348)
(MGI:3826319|PMID:18854139)
GO_REF:0000024
RGD
UniProt
PMID:18622393 PMID:18854139 PMID:33500348 GO_REF:0000024 MGI:3826319 MGI:6506156 NCBI chr20:1,521,323...1,534,884
Ensembl chr20:1,521,323...1,529,846
JBrowse link
epigenetic regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asip agouti signaling protein acts_upstream_of_or_within ISO MGI:1855930|MGI:1855937 (MGI:2652932|PMID:12601169) RGD PMID:12601169 MGI:2652932 NCBI chr 3:143,473,584...143,561,170
Ensembl chr 3:143,555,696...143,561,171
JBrowse link
G Cggbp1 CGG triplet repeat binding protein 1 involved_in ISO (PMID:31547883) RGD PMID:31547883 NCBI chr11:2,565,629...2,572,869
Ensembl chr11:2,565,484...2,573,031
JBrowse link
G Ctcf CCCTC-binding factor involved_in ISO
IBA
(PMID:16815976)
PMID:21873635
RGD PMID:16815976 PMID:21873635 RGD:13792537 NCBI chr19:33,521,726...33,571,124
Ensembl chr19:33,529,319...33,571,123
JBrowse link
G Dppa2 developmental pluripotency-associated 2 acts_upstream_of_or_within ISO MGI:5298642 (MGI:5298147|PMID:21896782) RGD PMID:21896782 MGI:5298147 NCBI chr11:52,549,024...52,556,740 JBrowse link
G Ezhip EZH inhibitory protein involved_in ISO (PMID:30923826) RGD PMID:30923826 NCBI chr  X:16,368,582...16,373,642
Ensembl chr  X:16,368,962...16,372,256
JBrowse link
G Glmn glomulin, FKBP associated protein involved_in ISO (PMID:12604780) RGD PMID:12604780 NCBI chr14:2,187,144...2,231,295
Ensembl chr14:2,187,642...2,230,420
JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in ISO
IEA
(PMID:16132718)
GO_REF:0000107
RGD
Ensembl
PMID:16132718 GO_REF:0000107 NCBI chr 8:109,026,905...109,028,031
Ensembl chr 8:109,026,905...109,028,024
JBrowse link
G H1f8 H1.8 linker histone involved_in ISS
ISO
GO_REF:0000024
(MGI:5559660|PMID:22868987)
CAFA
RGD
PMID:22868987 GO_REF:0000024 MGI:5559660 NCBI chr 4:148,993,133...148,998,254
Ensembl chr 4:148,993,133...148,998,254
JBrowse link
G H3c1 H3 clustered histone 1 involved_in ISO (PMID:16267050) RGD PMID:16267050 NCBI chr17:41,367,824...41,368,902
Ensembl chr17:41,368,386...41,368,856
JBrowse link
G Hdac4 histone deacetylase 4 involved_in ISO (PMID:24413532) RGD PMID:24413532 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164
JBrowse link
G Hdac5 histone deacetylase 5 involved_in ISO (PMID:24413532) RGD PMID:24413532 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235
JBrowse link
G Hdac6 histone deacetylase 6 involved_in ISO (PMID:24413532) RGD PMID:24413532 NCBI chr  X:14,550,645...14,572,445
Ensembl chr  X:14,551,044...14,572,441
JBrowse link
G Hist1h2ail1 histone cluster 1 H2a family member I like 1 involved_in ISO (PMID:16267050) RGD PMID:16267050 NCBI chr17:41,568,666...41,569,076
Ensembl chr17:41,568,471...41,569,109
JBrowse link
G Hist1h3b histone cluster 1, H3b involved_in ISO (PMID:16267050) RGD PMID:16267050 NCBI chr17:42,722,805...42,723,925
Ensembl chr17:42,723,450...42,723,911
JBrowse link
G Klf2 KLF transcription factor 2 acts_upstream_of_or_within ISO MGI:3588194 (MGI:5429781|PMID:22482507) RGD PMID:22482507 MGI:5429781 NCBI chr16:17,521,773...17,523,723
Ensembl chr16:17,514,552...17,523,944
JBrowse link
G Kmt2a lysine methyltransferase 2A involved_in ISO (PMID:20010842) RGD PMID:20010842 NCBI chr 8:45,116,771...45,193,320
Ensembl chr 8:45,118,814...45,193,181
JBrowse link
G Kpna7 karyopherin subunit alpha 7 acts_upstream_of_or_within ISO MGI:6108355 (MGI:5913752|PMID:20699224) RGD PMID:20699224 MGI:5913752 NCBI chr12:9,576,378...9,635,247
Ensembl chr12:9,576,378...9,612,833
JBrowse link
G Macroh2a1 macroH2A.1 histone involved_in ISO (PMID:20008927) RGD PMID:20008927 NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072
JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within ISO MGI:2137311|MGI:2158354 (MGI:3576944|PMID:15757975), (MGI:3789859|PMID:17532643) RGD PMID:15757975 PMID:17532643 MGI:3576944 MGI:3789859 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Mir127 microRNA 127 acts_upstream_of_or_within ISO MGI:5789789 (MGI:3831054|PMID:19126398), (MGI:5661605|PMID:26138477) RGD PMID:19126398 PMID:26138477 MGI:3831054 MGI:5661605 NCBI chr 6:128,546,215...128,546,311
Ensembl chr 6:128,546,215...128,546,311
JBrowse link
G Mir136 microRNA 136 acts_upstream_of_or_within ISO (MGI:3831054|PMID:19126398) RGD PMID:19126398 MGI:3831054 NCBI chr 6:128,549,096...128,549,177
Ensembl chr 6:128,549,096...128,549,177
JBrowse link
G Morc1 MORC family CW-type zinc finger 1 acts_upstream_of_or_within ISO MGI:1857787 (MGI:5694015|PMID:25503965) RGD PMID:25503965 MGI:5694015 NCBI chr11:52,178,769...52,384,255
Ensembl chr11:52,178,769...52,384,255
JBrowse link
G Mta1 metastasis associated 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:24413532)
UniProt
Ensembl
RGD
PMID:24413532 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:132,178,608...132,217,641
Ensembl chr 6:132,178,853...132,217,641
JBrowse link
G Mtf2 metal response element binding transcription factor 2 involved_in ISO (MGI:4429983|PMID:20144788), (MGI:4946172|PMID:21059868) RGD PMID:20144788 PMID:21059868 MGI:4429983 MGI:4946172 NCBI chr14:1,639,256...1,683,513
Ensembl chr14:1,640,746...1,683,524
JBrowse link
G Phb1 prohibitin 1 involved_in ISO (PMID:12466959) RGD PMID:12466959 NCBI chr10:80,605,268...80,618,043
Ensembl chr10:80,605,251...80,618,042
JBrowse link
G Phf19 PHD finger protein 19 involved_in ISO (MGI:5318799|PMID:22438827) RGD PMID:22438827 MGI:5318799 NCBI chr 3:18,175,281...18,197,289
Ensembl chr 3:18,175,282...18,196,405
JBrowse link
G Prdm14 PR/SET domain 14 acts_upstream_of_or_within ISO MGI:1342772 (MGI:5429781|PMID:22482507) RGD PMID:22482507 MGI:5429781 NCBI chr 5:6,082,163...6,092,712
Ensembl chr 5:6,082,442...6,092,712
JBrowse link
G Rnf168 ring finger protein 168 involved_in ISO
IEA
(PMID:20550933)
GO_REF:0000107
RGD
Ensembl
PMID:20550933 GO_REF:0000107 NCBI chr11:68,486,313...68,508,296
Ensembl chr11:68,486,321...68,508,277
JBrowse link
G Rnf2 ring finger protein 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:33864376)
UniProt
Ensembl
RGD
PMID:33864376 GO_REF:0000024 GO_REF:0000107 NCBI chr13:63,553,964...63,584,047
Ensembl chr13:63,554,862...63,583,099
JBrowse link
G Rnf8 ring finger protein 8 involved_in ISS
ISO
GO_REF:0000024
(PMID:20550933)
UniProt
RGD
PMID:20550933 GO_REF:0000024 NCBI chr20:7,682,258...7,710,448
Ensembl chr20:7,682,322...7,708,491
JBrowse link
G Sirt2 sirtuin 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5502462|PMID:23908241)
(PMID:23908241)
UniProt
Ensembl
RGD
PMID:23908241 GO_REF:0000024 GO_REF:0000107 MGI:5502462 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
JBrowse link
G Tdg thymine-DNA glycosylase involved_in ISO (MGI:5141157|PMID:21722948), (MGI:5487523|PMID:21278727) RGD PMID:21278727 PMID:21722948 MGI:5141157 MGI:5487523 NCBI chr 7:21,077,853...21,097,617
Ensembl chr 7:21,077,853...21,097,567
JBrowse link
G Tfap2c transcription factor AP-2 gamma involved_in ISO (PMID:24413532) RGD PMID:24413532 NCBI chr 3:161,315,114...161,322,998
Ensembl chr 3:161,315,031...161,322,995
JBrowse link
G Zfp335 zinc finger protein 335 involved_in ISO
ISS
IEA
(PMID:23178126)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:23178126 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:153,618,587...153,648,213
Ensembl chr 3:153,627,467...153,647,054
JBrowse link
establishment of genomic imprinting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asip agouti signaling protein acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1855930|MGI:1855937 (MGI:2652932|PMID:12601169)
GO_REF:0000107
RGD
Ensembl
PMID:12601169 GO_REF:0000107 MGI:2652932 NCBI chr 3:143,473,584...143,561,170
Ensembl chr 3:143,555,696...143,561,171
JBrowse link
G Asz1 ankyrin repeat, SAM and basic leucine zipper domain containing 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:4356194|PMID:19730684)
Ensembl
RGD
PMID:19730684 GO_REF:0000107 MGI:4356194 NCBI chr 4:46,400,485...46,456,085
Ensembl chr 4:46,400,485...46,456,085
JBrowse link
G Axin1 axin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1856035 (MGI:2652932|PMID:12601169)
GO_REF:0000107
RGD
Ensembl
PMID:12601169 GO_REF:0000107 MGI:2652932 NCBI chr10:15,163,684...15,215,615
Ensembl chr10:15,163,684...15,215,615
JBrowse link
G Cdkn1c cyclin-dependent kinase inhibitor 1C acts_upstream_of_or_within ISO MGI:1933758|MGI:3840687 (MGI:3839493|PMID:19276117) RGD PMID:19276117 MGI:3839493 NCBI chr 1:198,655,394...198,658,097
Ensembl chr 1:198,655,407...198,658,048
JBrowse link
G Ctcf CCCTC-binding factor involved_in ISO
IEA
(PMID:17827499)
GO_REF:0000107
RGD
Ensembl
PMID:17827499 GO_REF:0000107 NCBI chr19:33,521,726...33,571,124
Ensembl chr19:33,529,319...33,571,123
JBrowse link
G Ddx4 DEAD-box helicase 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:4443217|PMID:20439430)
UniProt
RGD
PMID:20439430 GO_REF:0000024 MGI:4443217 NCBI chr 2:44,227,946...44,282,867
Ensembl chr 2:44,227,946...44,282,723
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha involved_in IEA
ISO
GO_REF:0000107
(MGI:3045942|PMID:15215868)
Ensembl
RGD
PMID:15215868 GO_REF:0000107 MGI:3045942 NCBI chr 6:26,791,517...26,902,161
Ensembl chr 6:26,822,609...26,896,687
JBrowse link
G Dnmt3l DNA methyltransferase 3 like acts_upstream_of_or_within
involved_in
ISO
IEA
ISS
MGI:2447127 (MGI:3663953|PMID:16920095)
(MGI:3054275|PMID:15318244)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:15318244 PMID:16920095 GO_REF:0000024 GO_REF:0000107 MGI:3054275 MGI:3663953 NCBI chr20:10,614,933...10,629,516
Ensembl chr20:10,614,934...10,629,516
JBrowse link
G Dppa3 developmental pluripotency-associated 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5432962|PMID:22722204)
UniProt
RGD
PMID:22722204 GO_REF:0000024 MGI:5432962 NCBI chr 4:155,851,461...155,854,845
Ensembl chr 4:155,815,296...155,854,861
JBrowse link
G Fkbp6 FKBP prolyl isomerase family member 6 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5439219|PMID:22902560)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22902560 GO_REF:0000024 GO_REF:0000107 MGI:5439219 NCBI chr12:21,318,251...21,390,350
Ensembl chr12:21,319,568...21,390,350
JBrowse link
G Gnas GNAS complex locus acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:4459474 (MGI:4454202|PMID:20427744)
GO_REF:0000107
RGD
Ensembl
PMID:20427744 GO_REF:0000107 MGI:4454202 NCBI chr 3:163,071,003...163,136,350
Ensembl chr 3:163,071,417...163,127,262
Ensembl chr 3:163,071,417...163,127,262
JBrowse link
G H19 H19 imprinted maternally expressed transcript acts_upstream_of_or_within ISO (MGI:1096753|PMID:9294195) RGD PMID:9294195 MGI:1096753 NCBI chr 1:197,730,698...197,733,374
Ensembl chr 1:197,730,698...197,733,134
JBrowse link
G Kdm1b lysine demethylase 1B acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:4359289 (MGI:4358629|PMID:19727073)
GO_REF:0000107
RGD
Ensembl
PMID:19727073 GO_REF:0000107 MGI:4358629 NCBI chr17:17,602,961...17,643,865
Ensembl chr17:17,602,961...17,643,800
JBrowse link
G Mael maelstrom spermatogenic transposon silencer involved_in IEA
ISO
GO_REF:0000107
(MGI:4417983|PMID:20011505)
Ensembl
RGD
PMID:20011505 GO_REF:0000107 MGI:4417983 NCBI chr13:78,457,073...78,496,657
Ensembl chr13:78,457,073...78,496,657
JBrowse link
G Meg3 maternally expressed 3 acts_upstream_of_or_within ISO MGI:4840060 (MGI:4839866|PMID:20610486), (MGI:5465388|PMID:23195472) RGD PMID:20610486 PMID:23195472 MGI:4839866 MGI:5465388 NCBI chr 6:128,491,808...128,524,010 JBrowse link
G Morc1 MORC family CW-type zinc finger 1 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1857787 (MGI:5694015|PMID:25503965)
GO_REF:0000107
RGD
Ensembl
PMID:25503965 GO_REF:0000107 MGI:5694015 NCBI chr11:52,178,769...52,384,255
Ensembl chr11:52,178,769...52,384,255
JBrowse link
G Mov10l1 Mov10 like RISC complex RNA helicase 1 involved_in ISO (MGI:4457283|PMID:20534472) RGD PMID:20534472 MGI:4457283 NCBI chr 7:120,070,171...120,135,406
Ensembl chr 7:120,070,135...120,134,765
JBrowse link
G Ndn necdin, MAGE family member acts_upstream_of_or_within ISO MGI:2653045|MGI:2653048 (MGI:1345919|PMID:10508517) RGD PMID:10508517 MGI:1345919 NCBI chr 1:115,849,168...115,850,767
Ensembl chr 1:115,849,105...115,850,767
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha involved_in ISO
IEA
(MGI:5009774|PMID:21047779)
GO_REF:0000107
RGD
Ensembl
PMID:21047779 GO_REF:0000107 MGI:5009774 NCBI chr 2:115,175,275...115,249,034
Ensembl chr 2:115,174,984...115,249,032
JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:3778312|PMID:18381894), (MGI:3815367|PMID:18922463)
Ensembl
RGD
PMID:18381894 PMID:18922463 GO_REF:0000107 MGI:3778312 MGI:3815367 NCBI chr15:45,431,402...45,498,034
Ensembl chr15:45,431,703...45,497,702
JBrowse link
G Piwil4 piwi-like RNA-mediated gene silencing 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:3778312|PMID:18381894), (MGI:3815367|PMID:18922463)
UniProt
RGD
PMID:18381894 PMID:18922463 GO_REF:0000024 MGI:3778312 MGI:3815367 NCBI chr 8:11,536,520...11,579,883
Ensembl chr 8:11,536,520...11,579,761
JBrowse link
G Pld6 phospholipase D family, member 6 involved_in IEA
ISO
GO_REF:0000107
(MGI:4943610|PMID:21397847)
Ensembl
RGD
PMID:21397847 GO_REF:0000107 MGI:4943610 NCBI chr10:44,577,740...44,581,686
Ensembl chr10:44,577,675...44,581,077
JBrowse link
G Tdrd1 tudor domain containing 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:4356231|PMID:19465913)
Ensembl
RGD
PMID:19465913 GO_REF:0000107 MGI:4356231 NCBI chr 1:255,871,939...255,919,222
Ensembl chr 1:255,875,887...255,915,871
JBrowse link
G Tdrd12 tudor domain containing 12 involved_in ISO (MGI:5516419|PMID:24067652) RGD PMID:24067652 MGI:5516419 NCBI chr 1:88,133,271...88,205,729
Ensembl chr 1:88,133,373...88,205,705
JBrowse link
G Tdrd5 tudor domain containing 5 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:4946318|PMID:21383078)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21383078 GO_REF:0000024 GO_REF:0000107 MGI:4946318 NCBI chr13:68,394,180...68,447,745
Ensembl chr13:68,394,061...68,441,319
JBrowse link
G Tdrd9 tudor domain containing 9 involved_in ISS
ISO
GO_REF:0000024
(MGI:4418580|PMID:20059948)
UniProt
RGD
PMID:20059948 GO_REF:0000024 MGI:4418580 NCBI chr 6:131,029,644...131,145,076
Ensembl chr 6:131,029,652...131,144,651
JBrowse link
G Zdbf2 zinc finger, DBF-type containing 2 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:6161219 (MGI:6151717|PMID:27841881)
PMID:21873635
RGD PMID:27841881 PMID:21873635 MGI:6151717, RGD:13792537 NCBI chr 9:64,672,974...64,748,446
Ensembl chr 9:64,709,880...64,744,265
JBrowse link
G Zfp42 zinc finger protein 42 acts_upstream_of_or_within ISO MGI:4125334 (MGI:4940138|PMID:21233130) RGD PMID:21233130 MGI:4940138 NCBI chr16:48,836,463...48,845,443
Ensembl chr16:48,836,648...48,845,401
JBrowse link
G Zfp57 zinc finger protein 57 acts_upstream_of_or_within ISO MGI:3826984 (MGI:6506156|PMID:33500348) RGD PMID:33500348 MGI:6506156 NCBI chr20:1,521,323...1,534,884
Ensembl chr20:1,521,323...1,529,846
JBrowse link
facultative heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eed embryonic ectoderm development involved_in ISO (MGI:4431292|PMID:20064375), (MGI:4436818|PMID:20064376) RGD PMID:20064375 PMID:20064376 MGI:4431292 MGI:4436818 NCBI chr 1:143,867,875...143,895,008
Ensembl chr 1:143,867,875...143,894,974
JBrowse link
G Ehmt1 euchromatic histone lysine methyltransferase 1 involved_in ISO (MGI:4441247|PMID:19010785) RGD PMID:19010785 MGI:4441247 NCBI chr 3:7,580,680...7,729,046
Ensembl chr 3:7,580,683...7,729,007
JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit involved_in ISO (MGI:4436818|PMID:20064376) RGD PMID:20064376 MGI:4436818 NCBI chr10:86,126,023...86,162,001
Ensembl chr10:86,126,015...86,161,921
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO (MGI:4431292|PMID:20064375), (MGI:4436818|PMID:20064376) RGD PMID:20064375 PMID:20064376 MGI:4431292 MGI:4436818 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 involved_in ISO (MGI:4431292|PMID:20064375), (MGI:4436818|PMID:20064376), (MGI:4441247|PMID:19010785) RGD PMID:19010785 PMID:20064375 PMID:20064376 MGI:4431292 MGI:4436818 MGI:4441247 NCBI chr17:19,777,487...19,957,696
Ensembl chr17:19,777,266...19,955,690
JBrowse link
G Kdm5a lysine demethylase 5A involved_in ISO (MGI:4431292|PMID:20064375) RGD PMID:20064375 MGI:4431292 NCBI chr 4:153,565,909...153,643,912
Ensembl chr 4:153,565,846...153,642,422
JBrowse link
G Suz12 SUZ12 polycomb repressive complex 2 subunit involved_in ISO (MGI:4431292|PMID:20064375), (MGI:4436818|PMID:20064376) RGD PMID:20064375 PMID:20064376 MGI:4431292 MGI:4436818 NCBI chr10:64,967,035...65,012,916
Ensembl chr10:64,966,967...65,012,738
JBrowse link
heterochromatin boundary formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trip12 thyroid hormone receptor interactor 12 involved_in ISO
ISS
(PMID:22884692)
GO_REF:0000024
RGD
UniProt
PMID:22884692 GO_REF:0000024 NCBI chr 9:85,916,691...86,043,312
Ensembl chr 9:85,916,691...86,051,403
JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 involved_in ISO
IEA
ISS
(PMID:22884692)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:22884692 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:69,116,758...69,224,490
Ensembl chr 7:69,116,761...69,224,903
JBrowse link
heterochromatin formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bahd1 bromo adjacent homology domain containing 1 involved_in ISO
IBA
(PMID:19666599)
PMID:21873635
RGD PMID:19666599 PMID:21873635 RGD:13792537 NCBI chr 3:105,891,207...105,914,414
Ensembl chr 3:105,892,478...105,914,410
JBrowse link
G Baz2a bromodomain adjacent to zinc finger domain, 2A acts_upstream_of_or_within ISO (MGI:3653583|PMID:16678107), (MGI:4462332|PMID:20168299) RGD PMID:16678107 PMID:20168299 MGI:3653583 MGI:4462332 NCBI chr 7:523,204...560,911
Ensembl chr 7:523,265...560,659
JBrowse link
G Bcl6 BCL6, transcription repressor acts_upstream_of_or_within ISO MGI:2135607 (MGI:5493185|PMID:23160044) RGD PMID:23160044 MGI:5493185 NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
JBrowse link
G Cbx3 chromobox 3 involved_in ISO (PMID:17540172) RGD PMID:17540172 NCBI chr 4:80,545,450...80,559,284
Ensembl chr 4:80,546,010...80,559,283
JBrowse link
G Ctbp1 C-terminal binding protein 1 involved_in ISO
IEA
(PMID:21102443)
GO_REF:0000107
RGD
Ensembl
PMID:21102443 GO_REF:0000107 NCBI chr14:77,455,580...77,482,821
Ensembl chr14:77,455,696...77,482,821
JBrowse link
G Dot1l DOT1 like histone lysine methyltransferase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:8,917,786...8,959,474
Ensembl chr 7:8,917,786...8,956,475
JBrowse link
G Efcc1 EF-hand and coiled-coil domain containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:120,188,202...120,223,464
Ensembl chr 4:120,188,470...120,217,516
JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit involved_in ISO
IBA
(MGI:3820717|PMID:19026781)
PMID:21873635
RGD PMID:19026781 PMID:21873635 MGI:3820717, RGD:13792537 NCBI chr10:86,126,023...86,162,001
Ensembl chr10:86,126,015...86,161,921
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G H1f0 H1.0 linker histone involved_in ISO UniProtKB:P09429 (PMID:19158276) RGD PMID:19158276 NCBI chr 7:110,592,834...110,594,694
Ensembl chr 7:110,592,208...110,594,694
JBrowse link
G Hells helicase, lymphoid specific acts_upstream_of_or_within ISO MGI:2178586 (MGI:3510059|PMID:15448183) RGD PMID:15448183 MGI:3510059 NCBI chr 1:236,701,704...236,748,239
Ensembl chr 1:236,701,758...236,746,844
JBrowse link
G Hils1 histone linker H1 domain, spermatid-specific 1 involved_in ISO (PMID:12920187) RGD PMID:12920187 NCBI chr10:79,913,525...79,914,321
Ensembl chr10:79,913,480...79,914,321
JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:16901784)
UniProt
RGD
PMID:16901784 GO_REF:0000024 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO UniProtKB:P07305 (PMID:19158276) RGD PMID:19158276 NCBI chr12:5,973,062...5,978,565
Ensembl chr12:5,901,586...5,978,565
JBrowse link
G Kmt2d lysine methyltransferase 2D involved_in ISO (MGI:4849597|PMID:20808952) RGD PMID:20808952 MGI:4849597 NCBI chr 7:129,980,744...130,022,088
Ensembl chr 7:129,962,887...130,020,325
JBrowse link
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 involved_in ISO (PMID:17540172) RGD PMID:17540172 NCBI chr 3:151,597,903...151,633,657
Ensembl chr 3:151,602,980...151,631,233
JBrowse link
G Lmna lamin A/C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:173,939,751...173,960,423
Ensembl chr 2:173,939,751...173,960,423
JBrowse link
G Lmnb1 lamin B1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:50,175,861...50,215,210
Ensembl chr18:50,175,874...50,214,502
JBrowse link
G Lmnb2 lamin B2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:8,792,628...8,808,665
Ensembl chr 7:8,789,314...8,808,665
JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within ISO MGI:2137311 (MGI:3530434|PMID:15608638) RGD PMID:15608638 MGI:3530434 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Pole3 DNA polymerase epsilon 3, accessory subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:75,973,941...75,977,175
Ensembl chr 5:75,974,717...75,977,231
JBrowse link
G Pole3-ps2 DNA polymerase epsilon 3, accessory subunit, pseudogene 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:26,135,927...26,136,417
Ensembl chr17:26,135,927...26,136,235
JBrowse link
G Pole3-ps3 DNA polymerase epsilon 3, accessory subunit, pseudogene 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:109,236,160...109,236,825
Ensembl chr 7:109,236,321...109,236,758
JBrowse link
G Ppm1d protein phosphatase, Mg2+/Mn2+ dependent, 1D involved_in ISO (MGI:5551345|PMID:24135283) RGD PMID:24135283 MGI:5551345 NCBI chr10:70,172,603...70,208,607
Ensembl chr10:70,172,603...70,208,607
JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in ISO
IEA
(PMID:17540172)
GO_REF:0000107
RGD
Ensembl
PMID:17540172 GO_REF:0000107 NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
JBrowse link
G Sirt1 sirtuin 1 involved_in
acts_upstream_of_or_within
ISO (PMID:15469825)
MGI:107187 (MGI:5493185|PMID:23160044)
RGD PMID:15469825 PMID:23160044 MGI:5493185 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in ISO (MGI:3653583|PMID:16678107) RGD PMID:16678107 MGI:3653583 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
JBrowse link
G Spty2d1 SPT2 chromatin protein domain containing 1 involved_in ISO (PMID:26109053) RGD PMID:26109053 NCBI chr 1:97,531,495...97,549,633
Ensembl chr 1:97,531,508...97,549,581
JBrowse link
G Tnp1 transition protein 1 involved_in ISO
ISS
(PMID:11315969)
GO_REF:0000024
RGD
UniProt
PMID:11315969 GO_REF:0000024 NCBI chr 9:74,594,463...74,595,072
Ensembl chr 9:74,594,466...74,595,274
JBrowse link
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 involved_in ISO (MGI:4431162|PMID:20080676) RGD PMID:20080676 MGI:4431162 NCBI chr 9:13,982,427...14,062,315
Ensembl chr 9:13,982,329...14,062,139
JBrowse link
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 involved_in ISO
IEA
ISS
(PMID:17967883)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:17967883 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:1,133,117...1,154,639
Ensembl chr 9:1,134,909...1,154,631
JBrowse link
G Uty ubiquitously transcribed tetratricopeptide repeat containing, Y-linked acts_upstream_of_or_within ISO (MGI:5305502|PMID:22192413) RGD PMID:22192413 MGI:5305502 NCBI chr  Y:942,838...1,105,313
Ensembl chr  Y:924,168...1,103,422
JBrowse link
heterochromatin organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmrtc2 DMRT-like family C2 acts_upstream_of_or_within ISO MGI:3711104 (MGI:3710435|PMID:17447844) RGD PMID:17447844 MGI:3710435 NCBI chr 1:80,466,259...80,473,883
Ensembl chr 1:80,466,132...80,473,531
JBrowse link
G Hdac2 histone deacetylase 2 involved_in ISO (PMID:19372552) RGD PMID:19372552 NCBI chr20:40,548,250...40,571,609
Ensembl chr20:40,548,250...40,571,609
JBrowse link
G Hp1bp3 heterochromatin protein 1, binding protein 3 involved_in ISS
IBA
ISO
IEA
GO_REF:0000024
PMID:21873635
(PMID:24830416)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:24830416 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 5:150,435,781...150,463,004
Ensembl chr 5:150,433,740...150,463,000
JBrowse link
G LOC120093070 PHD finger protein 11-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:33,526,380...33,549,382
Ensembl chr15:33,453,952...33,606,470
JBrowse link
G LOC120093163 PHD finger protein 11-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:33,453,948...33,475,669
Ensembl chr15:33,453,952...33,606,470
JBrowse link
G Loxl2 lysyl oxidase-like 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:24239292)
UniProt
Ensembl
RGD
PMID:24239292 GO_REF:0000024 GO_REF:0000107 NCBI chr15:44,683,449...44,773,067
Ensembl chr15:44,683,880...44,773,067
JBrowse link
G Mecom MDS1 and EVI1 complex locus involved_in ISO (MGI:6274969|PMID:22939622) RGD PMID:22939622 MGI:6274969 NCBI chr 2:112,909,353...113,464,583
Ensembl chr 2:112,909,321...113,464,590
JBrowse link
G Mthfr methylenetetrahydrofolate reductase acts_upstream_of ISO (PMID:24769206) RGD PMID:24769206 NCBI chr 5:158,465,248...158,484,999
Ensembl chr 5:158,465,296...158,483,797
JBrowse link
G Pcid2 PCI domain containing 2 involved_in ISO (MGI:6106288|PMID:29138493) RGD PMID:29138493 MGI:6106288 NCBI chr16:76,423,245...76,448,712
Ensembl chr16:76,423,245...76,448,712
JBrowse link
G Prdm16 PR/SET domain 16 involved_in ISO (MGI:6274969|PMID:22939622) RGD PMID:22939622