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ONTOLOGY REPORT - ANNOTATIONS


Term:protein transmembrane transport
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Accession:GO:0071806 term browser browse the term
Definition:The process in which a protein is transported across a membrane.
Comment:Note that this term is not intended for use in annotating lateral movement within membranes.
Synonyms:exact_synonym: protein membrane transport



show annotations for term's descendants           Sort by:
protein transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in ISO (MGI:6207500|PMID:29937375) RGD PMID:29937375 MGI:6207500 NCBI chr 5:67,678,267...67,801,162
Ensembl chr 5:67,681,297...67,801,170
JBrowse link
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:79,155,873...79,158,247
Ensembl chr 1:79,155,693...79,158,505
JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 acts_upstream_of_or_within ISO (PMID:28576874) RGD PMID:28576874 NCBI chr 3:109,816,397...109,826,528
Ensembl chr 3:109,816,366...109,828,308
JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 acts_upstream_of_or_within ISO (PMID:28576874) RGD PMID:28576874 NCBI chr17:19,685,218...19,776,668
Ensembl chr17:19,685,215...19,776,661
JBrowse link
G Ednra endothelin receptor type A involved_in IEA
ISO
GO_REF:0000107
(PMID:27026367)
Ensembl
RGD
PMID:27026367 GO_REF:0000107 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
JBrowse link
G Ednrb endothelin receptor type B involved_in ISO (PMID:27026367) RGD PMID:27026367 NCBI chr15:80,640,839...80,672,115
Ensembl chr15:80,643,043...80,672,115
JBrowse link
G ENSRNOG00000064831 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 Ensembl chr 5:55,583,379...55,585,551 JBrowse link
G Exoc4 exocyst complex component 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:28576874)
Ensembl
RGD
PMID:28576874 GO_REF:0000107 NCBI chr 4:61,807,706...62,584,316
Ensembl chr 4:61,807,761...62,585,723
JBrowse link
G Exoc7 exocyst complex component 7 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:28576874)
Ensembl
RGD
PMID:28576874 GO_REF:0000107 NCBI chr10:101,521,630...101,540,425
Ensembl chr10:101,520,927...101,540,561
JBrowse link
G Hpse heparanase involved_in IEA
ISO
GO_REF:0000107
(PMID:27026367)
Ensembl
RGD
PMID:27026367 GO_REF:0000107 NCBI chr14:8,896,593...8,937,011
Ensembl chr14:8,896,593...8,937,010
JBrowse link
G Ift20 intraflagellar transport 20 acts_upstream_of_or_within ISO (PMID:28576874) RGD PMID:28576874 NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124
JBrowse link
G LOC134478824 protein transport protein Sec61 subunit gamma-like involved_in IEA GO_REF:0000108 GOC GO_REF:0000108
G Myo5b myosin Vb acts_upstream_of_or_within ISO (PMID:28576874) RGD PMID:28576874 NCBI chr18:68,038,759...68,341,568
Ensembl chr18:68,038,759...68,338,745
JBrowse link
G Prf1 perforin 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:20038786), (PMID:24558045)
(PMID:21037563)
Ensembl
RGD
PMID:20038786 PMID:21037563 PMID:24558045 GO_REF:0000107 NCBI chr20:29,246,202...29,251,712
Ensembl chr20:29,246,202...29,251,701
JBrowse link
G Rab11a RAB11a, member RAS oncogene family involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:28576874)
Ensembl
RGD
PMID:28576874 GO_REF:0000107 NCBI chr 8:65,223,698...65,246,461
Ensembl chr 8:65,222,949...65,246,525
JBrowse link
G Timm22 translocase of inner mitochondrial membrane 22 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:61,253,459...61,261,217
Ensembl chr10:61,253,450...61,261,755
JBrowse link
G Tmed10 transmembrane p24 trafficking protein 10 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:104,991,843...105,026,705
Ensembl chr 6:104,991,838...105,026,753
JBrowse link
G Tomm22 translocase of outer mitochondrial membrane 22 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:111,223,508...111,228,671
Ensembl chr 7:111,216,571...111,246,799
JBrowse link
G Trip11 thyroid hormone receptor interactor 11 acts_upstream_of_or_within ISO (PMID:28576874) RGD PMID:28576874 NCBI chr 6:120,995,242...121,067,693
Ensembl chr 6:120,998,733...121,067,781
JBrowse link
intracellular protein transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO MGI:2154396 (PMID:7889565) RGD PMID:7889565 NCBI chr20:13,469,325...13,596,942
Ensembl chr20:13,471,668...13,597,016
JBrowse link
G C2cd5 C2 calcium-dependent domain containing 5 involved_in ISO
IBA
(PMID:21907143)
GO_REF:0000033
RGD
GO_Central
PMID:21907143 GO_REF:0000033 NCBI chr 4:175,969,544...176,055,597
Ensembl chr 4:175,969,545...176,055,558
JBrowse link
G Rtn2 reticulon 2 acts_upstream_of_or_within ISS
ISO
GO_REF:0000024
MGI:3528884 (PMID:19720795)
UniProt
RGD
PMID:19720795 GO_REF:0000024 NCBI chr 1:78,935,056...78,948,069
Ensembl chr 1:78,935,104...78,948,069
JBrowse link
post-translational protein targeting to membrane, translocation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glp1r glucagon-like peptide 1 receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2150310 (PMID:23542788)
Ensembl
RGD
PMID:23542788 GO_REF:0000107 NCBI chr20:8,972,004...9,010,241
Ensembl chr20:8,972,004...9,010,241
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:29719251)
UniProt
Ensembl
RGD
PMID:29719251 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891
JBrowse link
G Sec61a1 SEC61 translocon subunit alpha 1 involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(PMID:29719251)
UniProt
GO_Central
Ensembl
RGD
PMID:29719251 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:120,973,519...120,987,871
Ensembl chr 4:120,960,626...120,987,925
JBrowse link
G Sec61a2 SEC61 translocon subunit alpha 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:72,407,574...72,445,630
Ensembl chr17:72,407,671...72,434,494
JBrowse link
G Sec61b SEC61 translocon subunit beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:61,773,594...61,781,804
Ensembl chr 5:61,773,594...61,781,804
JBrowse link
G Sec61g Sec61 translocon subunit gamma involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:90,899,766...90,906,143
Ensembl chr14:90,899,768...90,906,162
JBrowse link
G Sec61g-ps4 Sec61 translocon subunit gamma, pseudogene 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:113,427,370...113,427,696
Ensembl chr  X:113,427,440...113,427,646
JBrowse link
G Sec61gl2 Sec61 translocon subunit gamma like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:75,638,449...75,638,655
Ensembl chr17:75,638,449...75,638,655
JBrowse link
G Sec61gl4 SEC61 translocon subunit gamma like 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:41,302,673...41,303,608 JBrowse link
G Sec62 SEC62 homolog, preprotein translocation factor involved_in ISO
IBA
(PMID:29719251)
GO_REF:0000033
RGD
GO_Central
PMID:29719251 GO_REF:0000033 NCBI chr 2:112,570,810...112,598,198
Ensembl chr 2:112,570,819...112,601,814
JBrowse link
G Sec63 SEC63 homolog, protein translocation regulator involved_in ISO (PMID:29719251) RGD PMID:29719251 NCBI chr20:46,245,101...46,314,055
Ensembl chr20:46,245,101...46,314,055
JBrowse link
protein import into mitochondrial intermembrane space term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aifm1 apoptosis inducing factor, mitochondria associated 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:6114310|PMID:26004228)
(PMID:26004228)
UniProt
RGD
PMID:26004228 GO_REF:0000024 MGI:6114310 NCBI chr  X:127,650,223...127,689,356
Ensembl chr  X:127,650,226...127,689,256
JBrowse link
G Chchd4 coiled-coil-helix-coiled-coil-helix domain containing 4 involved_in ISO
IBA
IEA
ISS
(PMID:16185709), (PMID:23676665)
GO_REF:0000033
GO_REF:0000002
GO_REF:0000024
RGD
GO_Central
InterPro
UniProt
PMID:16185709 PMID:23676665 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr 4:123,968,264...123,977,398
Ensembl chr 4:123,968,265...123,977,414
Ensembl chr 1:123,968,265...123,977,414
JBrowse link
G Chchd4l1 coiled-coil-helix-coiled-coil-helix domain containing 4 like 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:58,696,582...58,702,716
Ensembl chr  X:58,696,582...58,702,713
JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:56,579,195...56,590,011
Ensembl chr 9:56,579,201...56,589,662
JBrowse link
G LOC120094797 mitochondrial intermembrane space import and assembly protein 40-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:60,584,841...60,585,260
Ensembl chr 9:60,584,841...60,585,260
JBrowse link
protein import into mitochondrial matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07030524.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr10:88,602,453...88,602,827 JBrowse link
G Card9 caspase recruitment domain family, member 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:9,171,814...9,180,310
Ensembl chr 3:9,171,815...9,180,237
JBrowse link
G Dnajc15 DnaJ heat shock protein family (Hsp40) member C15 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:53,182,060...53,249,675
Ensembl chr15:53,184,855...53,249,675
JBrowse link
G Dnajc19 DnaJ heat shock protein family (Hsp40) member C19 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:116,923,272...116,945,312
Ensembl chr 2:116,923,272...116,945,264
JBrowse link
G Dnlz DNL-type zinc finger involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:9,169,948...9,171,727
Ensembl chr 3:9,169,793...9,180,551
JBrowse link
G ENSRNOG00000064217 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 4:158,213,575...158,213,949 JBrowse link
G ENSRNOG00000071118 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr10:55,253,098...55,253,904 JBrowse link
G Grpel1 GrpE-like 1, mitochondrial involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:74,292,023...74,298,243
Ensembl chr14:74,292,023...74,298,200
JBrowse link
G Grpel2 GrpE-like 2, mitochondrial involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:55,167,831...55,180,073
Ensembl chr18:55,168,209...55,180,180
JBrowse link
G Magmas-ps1 mitochondria-associated protein involved in granulocyte-macrophage colony-stimulating factor signal transduction, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:88,602,379...88,602,899 JBrowse link
G Pam16 presequence translocase associated motor 16 involved_in ISO
IBA
SGD:S000003640 (PMID:20053669)
GO_REF:0000033
RGD
GO_Central
PMID:20053669 GO_REF:0000033 NCBI chr10:10,942,534...10,950,654
Ensembl chr10:10,943,001...10,950,649
JBrowse link
G Romo1 reactive oxygen species modulator 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:144,659,709...144,661,310
Ensembl chr 3:144,659,826...144,661,310
JBrowse link
G Timm17a translocase of inner mitochondrial membrane 17A involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr13:46,731,117...46,742,604
Ensembl chr13:46,730,660...46,742,655
JBrowse link
G Timm17b translocase of inner mitochondrial membrane 17b involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:14,596,330...14,603,491
Ensembl chr  X:14,594,577...14,603,416
JBrowse link
G Timm21 translocase of inner mitochondrial membrane 21 involved_in ISO
IBA
IEA
ISS
(PMID:23260140)
GO_REF:0000033
GO_REF:0000104
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:23260140 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 NCBI chr18:78,314,900...78,319,362
Ensembl chr18:78,314,909...78,319,454
JBrowse link
G Timm23 translocase of inner mitochondrial membrane 23 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr16:7,410,308...7,436,392
Ensembl chr16:7,409,688...7,436,379
JBrowse link
G Timm23-ps8 translocase of inner mitochondrial membrane 23, pseudogene 8 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:80,036,051...80,037,343
Ensembl chr 3:80,036,240...80,036,869
JBrowse link
G Timm23-ps8 translocase of inner mitochondrial membrane 23, pseudogene 8 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 3:80,036,240...80,036,869 JBrowse link
G Timm44 translocase of inner mitochondrial membrane 44 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr12:2,612,581...2,629,374
Ensembl chr12:2,612,581...2,629,351
JBrowse link
G Timm50 translocase of inner mitochondrial membrane 50 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:83,574,872...83,582,748
Ensembl chr 1:83,556,757...83,582,793
JBrowse link
G Tomm20 translocase of outer mitochondrial membrane 20 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:54,925,197...54,935,188
Ensembl chr19:54,923,402...54,935,198
JBrowse link
G Tomm20l translocase of outer mitochondrial membrane 20 like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:89,594,016...89,612,070
Ensembl chr 6:89,599,873...89,610,147
JBrowse link
G Tomm40 translocase of outer mitochondrial membrane 40 involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr 1:79,358,781...79,370,882
Ensembl chr 1:79,358,786...79,370,915
JBrowse link
G Tomm40l translocase of outer mitochondrial membrane 40 like involved_in IEA
IBA
GO_REF:0000002
GO_REF:0000033
InterPro
GO_Central
GO_REF:0000002 GO_REF:0000033 NCBI chr13:83,636,692...83,641,654
Ensembl chr13:83,638,195...83,641,654
JBrowse link
G Tomm7 translocase of outer mitochondrial membrane 7 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:11,305,122...11,311,963
Ensembl chr 4:11,305,110...11,311,962
JBrowse link
G Tomm70 translocase of outer mitochondrial membrane 70 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:43,378,719...43,417,166
Ensembl chr11:43,377,216...43,417,202
JBrowse link
protein import into peroxisome matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lonp2 lon peptidase 2, peroxisomal involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr19:20,407,475...20,498,985
Ensembl chr19:20,407,477...20,499,014
JBrowse link
G Pex1 peroxisomal biogenesis factor 1 involved_in ISO
IBA
(PMID:9398847)
GO_REF:0000033
RGD
GO_Central
PMID:9398847 GO_REF:0000033 NCBI chr 4:30,519,950...30,558,953
Ensembl chr 4:30,519,955...30,558,921
JBrowse link
G Pex10 peroxisomal biogenesis factor 10 involved_in ISO
IBA
(PMID:9683594)
GO_REF:0000033
(PMID:10862081)
RGD
GO_Central
PMID:9683594 PMID:10862081 GO_REF:0000033 NCBI chr 5:165,627,799...165,632,965
Ensembl chr 5:165,627,799...165,632,965
JBrowse link
G Pex12 peroxisomal biogenesis factor 12 involved_in ISO
IBA
(PMID:10562279), (PMID:9090384)
GO_REF:0000033
RGD
GO_Central
PMID:9090384 PMID:10562279 GO_REF:0000033 NCBI chr10:68,095,776...68,103,812
Ensembl chr10:68,095,776...68,099,428
JBrowse link
G Pex14 peroxisomal biogenesis factor 14 involved_in ISO (PMID:15146459) RGD PMID:15146459 NCBI chr 5:159,399,776...159,536,260
Ensembl chr 5:159,399,776...159,536,272
JBrowse link
G Pex16 peroxisomal biogenesis factor 16 acts_upstream_of_or_within ISO (PMID:9922452) RGD PMID:9922452 NCBI chr 3:78,347,212...78,352,603
Ensembl chr 3:78,343,164...78,353,207
JBrowse link
G Pex2 peroxisomal biogenesis factor 2 involved_in ISO (PMID:10528859) RGD PMID:10528859 NCBI chr 2:96,050,380...96,072,928
Ensembl chr 2:96,045,958...96,073,404
JBrowse link
G Pex26 peroxisomal biogenesis factor 26 involved_in ISO
IBA
(PMID:12717447), (PMID:15858711), (PMID:16257970)
GO_REF:0000033
RGD
GO_Central
PMID:12717447 PMID:15858711 PMID:16257970 GO_REF:0000033 NCBI chr 4:154,414,332...154,426,954
Ensembl chr 4:154,414,849...154,426,952
JBrowse link
G Pex5 peroxisomal biogenesis factor 5 involved_in ISO
ISS
(MGI:5442515|PMID:11463335)
UniProtKB:O09012 (PMID:11463335), (PMID:16314507), (PMID:17157249), (PMID:18346465), (PMID:21976670), (PMID:24235149), (PMID:24662292), (PMID:26344566), (PMID:33389129)
(PMID:25538232)
UniProtKB:O09012 (PMID:11546814), (PMID:11931631)
GO_REF:0000024
RGD
UniProt
PMID:11463335 PMID:11546814 PMID:11931631 PMID:16314507 PMID:17157249 More... GO_REF:0000024 MGI:5442515 NCBI chr 4:157,270,671...157,296,432
Ensembl chr 4:157,270,672...157,296,431
JBrowse link
G Pex6 peroxisomal biogenesis factor 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:14,258,145...14,270,335
Ensembl chr 9:14,258,145...14,270,303
JBrowse link
G Pex7 peroxisomal biogenesis factor 7 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:9090381)
GO_REF:0000033
(MGI:3052413|PMID:12915479)
(PMID:11546814), (PMID:12522768), (PMID:22057399), (PMID:25538232)
RGD
GO_Central
PMID:9090381 PMID:11546814 PMID:12522768 PMID:12915479 PMID:22057399 More... GO_REF:0000033 MGI:3052413 NCBI chr 1:14,582,698...14,646,686
Ensembl chr 1:14,582,699...14,646,748
JBrowse link
G Trim37 tripartite motif-containing 37 acts_upstream_of ISO (PMID:28724525) RGD PMID:28724525 NCBI chr10:71,943,384...72,075,563
Ensembl chr10:71,943,375...72,075,558
JBrowse link
protein import into peroxisome matrix, docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pex13 peroxisomal biogenesis factor 13 involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
IEA
GO_REF:0000024
MGI:2384515 (PMID:12897163)
GO_REF:0000033
GO_REF:0000002
(PMID:28765278), (PMID:8858165)
UniProt
RGD
GO_Central
InterPro
PMID:8858165 PMID:12897163 PMID:28765278 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 NCBI chr14:97,602,829...97,621,233
Ensembl chr14:97,603,539...97,621,262
JBrowse link
G Pex14 peroxisomal biogenesis factor 14 involved_in IEA
IBA
ISO
IDA
GO_REF:0000104
GO_REF:0000033
(PMID:11438541), (PMID:25538232), (PMID:28765278)
PMID:19122147
UniProt
GO_Central
RGD
PMID:11438541 PMID:25538232 PMID:28765278 PMID:19122147 GO_REF:0000033 GO_REF:0000104, RGD:155230698 NCBI chr 5:159,399,776...159,536,260
Ensembl chr 5:159,399,776...159,536,272
JBrowse link
G Pex5 peroxisomal biogenesis factor 5 involved_in ISO
IBA
(PMID:21976670)
GO_REF:0000033
RGD
GO_Central
PMID:21976670 GO_REF:0000033 NCBI chr 4:157,270,671...157,296,432
Ensembl chr 4:157,270,672...157,296,431
JBrowse link
G Pex5l peroxisomal biogenesis factor 5-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:115,694,868...115,908,365
Ensembl chr 2:115,700,972...115,913,628
JBrowse link
protein import into peroxisome matrix, receptor recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pex1 peroxisomal biogenesis factor 1 involved_in ISO (PMID:16314507), (PMID:16854980), (PMID:19208625), (PMID:21362118), (PMID:29884772) RGD PMID:16314507 PMID:16854980 PMID:19208625 PMID:21362118 PMID:29884772 NCBI chr 4:30,519,950...30,558,953
Ensembl chr 4:30,519,955...30,558,921
JBrowse link
G Pex10 peroxisomal biogenesis factor 10 involved_in ISO (PMID:24662292) RGD PMID:24662292 NCBI chr 5:165,627,799...165,632,965
Ensembl chr 5:165,627,799...165,632,965
JBrowse link
G Pex12 peroxisomal biogenesis factor 12 involved_in ISO (PMID:24662292) RGD PMID:24662292 NCBI chr10:68,095,776...68,103,812
Ensembl chr10:68,095,776...68,099,428
JBrowse link
G Pex2 peroxisomal biogenesis factor 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:24662292)
UniProt
Ensembl
RGD
PMID:24662292 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:96,050,380...96,072,928
Ensembl chr 2:96,045,958...96,073,404
JBrowse link
G Pex5 peroxisomal biogenesis factor 5 involved_in ISS
ISO
GO_REF:0000024
(PMID:11336669), (PMID:22371489), (PMID:29884772)
UniProt
RGD
PMID:11336669 PMID:22371489 PMID:29884772 GO_REF:0000024 NCBI chr 4:157,270,671...157,296,432
Ensembl chr 4:157,270,672...157,296,431
JBrowse link
G Pex6 peroxisomal biogenesis factor 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:16314507), (PMID:16854980), (PMID:19208625), (PMID:21362118), (PMID:29884772)
UniProt
RGD
PMID:16314507 PMID:16854980 PMID:19208625 PMID:21362118 PMID:29884772 GO_REF:0000024 NCBI chr 9:14,258,145...14,270,335
Ensembl chr 9:14,258,145...14,270,303
JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked involved_in ISO (PMID:22371489) RGD PMID:22371489 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711
JBrowse link
protein import into peroxisome matrix, substrate release term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pex14 peroxisomal biogenesis factor 14 involved_in ISO
IEA
(PMID:21976670)
GO_REF:0000107
RGD
Ensembl
PMID:21976670 GO_REF:0000107 NCBI chr 5:159,399,776...159,536,260
Ensembl chr 5:159,399,776...159,536,272
JBrowse link
G Pex5 peroxisomal biogenesis factor 5 involved_in ISS
ISO
GO_REF:0000024
(PMID:26344566)
UniProt
RGD
PMID:26344566 GO_REF:0000024 NCBI chr 4:157,270,671...157,296,432
Ensembl chr 4:157,270,672...157,296,431
JBrowse link
protein import into peroxisome matrix, translocation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pex13 peroxisomal biogenesis factor 13 involved_in ISO (PMID:28765278) RGD PMID:28765278 NCBI chr14:97,602,829...97,621,233
Ensembl chr14:97,603,539...97,621,262
JBrowse link
G Pex14 peroxisomal biogenesis factor 14 involved_in ISO
IEA
(PMID:21525035), (PMID:28765278)
GO_REF:0000107
RGD
Ensembl
PMID:21525035 PMID:28765278 GO_REF:0000107 NCBI chr 5:159,399,776...159,536,260
Ensembl chr 5:159,399,776...159,536,272
JBrowse link
G Pex5 peroxisomal biogenesis factor 5 involved_in ISO (PMID:11336669), (PMID:7719337) RGD PMID:7719337 PMID:11336669 NCBI chr 4:157,270,671...157,296,432
Ensembl chr 4:157,270,672...157,296,431
JBrowse link
G Pex6 peroxisomal biogenesis factor 6 involved_in ISO (PMID:8670792) RGD PMID:8670792 NCBI chr 9:14,258,145...14,270,335
Ensembl chr 9:14,258,145...14,270,303
JBrowse link
protein transmembrane import into intracellular organelle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspa8 heat shock protein family A (Hsp70) member 8 IEP RGD PMID:9038169 RGD:10059368 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
JBrowse link
SRP-dependent cotranslational protein targeting to membrane, translocation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sec61a1 SEC61 translocon subunit alpha 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:120,973,519...120,987,871
Ensembl chr 4:120,960,626...120,987,925
JBrowse link
G Sec61a2 SEC61 translocon subunit alpha 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:72,407,574...72,445,630
Ensembl chr17:72,407,671...72,434,494
JBrowse link
G Sec61b SEC61 translocon subunit beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:61,773,594...61,781,804
Ensembl chr 5:61,773,594...61,781,804
JBrowse link
G Srp54a signal recognition particle 54A involved_in ISO
IBA
(PMID:8521805)
GO_REF:0000033
RGD
GO_Central
PMID:8521805 GO_REF:0000033 NCBI chr 6:72,587,584...72,626,878
Ensembl chr 6:72,587,605...72,625,189
JBrowse link
G Tram1 translocation associated membrane protein 1 involved_in IEA
ISO
GO_REF:0000002
(PMID:8698819)
InterPro
RGD
PMID:8698819 GO_REF:0000002 NCBI chr 5:5,642,579...5,667,666
Ensembl chr 5:5,642,546...5,686,971
JBrowse link
G Tram2 translocation associated membrane protein 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:23,419,204...23,498,745
Ensembl chr 9:23,424,232...23,498,689
JBrowse link
G Zfand2b zinc finger AN1-type containing 2B acts_upstream_of_or_within ISO (PMID:24160817) RGD PMID:24160817 NCBI chr 9:76,665,466...76,668,447
Ensembl chr 9:76,665,546...76,668,445
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19872
    cellular process 18312
      transmembrane transport 1602
        protein transmembrane transport 84
          intracellular protein transmembrane transport + 33
          protein import into chloroplast stroma + 0
          protein secretion by the type I secretion system 0
          protein secretion by the type III secretion system 0
          protein secretion by the type IV secretion system 0
          protein secretion by the type VI secretion system 0
          protein secretion by the type VII secretion system 0
          protein transmembrane import into intracellular organelle + 47
          protein transport across the cell outer membrane + 0
          protein transport by the Sec complex 0
          protein transport by the Tat complex 0
Path 2
Term Annotations click to browse term
  biological_process 19872
    localization 5633
      macromolecule localization 3185
        cellular macromolecule localization 2698
          protein localization 2686
            establishment of protein localization 1772
              protein transport 1465
                protein transmembrane transport 84
                  intracellular protein transmembrane transport + 33
                  protein import into chloroplast stroma + 0
                  protein secretion by the type I secretion system 0
                  protein secretion by the type III secretion system 0
                  protein secretion by the type IV secretion system 0
                  protein secretion by the type VI secretion system 0
                  protein secretion by the type VII secretion system 0
                  protein transmembrane import into intracellular organelle + 47
                  protein transport across the cell outer membrane + 0
                  protein transport by the Sec complex 0
                  protein transport by the Tat complex 0
paths to the root