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ONTOLOGY REPORT - ANNOTATIONS

Term:endoplasmic reticulum tubular network organization
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Accession:GO:0071786 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum (ER) tubular network. The ER tubular network is the ER part that that has membranes with high curvature in cross-section.
Synonyms:exact_synonym: ER tubular network organisation;   ER tubular network organization;   endoplasmic reticulum tubular network organisation


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endoplasmic reticulum tubular network organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lnpk lunapark, ER junction formation factor involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:74,345,180...74,409,802
Ensembl chr 2:74,350,635...74,409,779 		JBrowse link
G Rab10 RAB10, member RAS oncogene family involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:3,297,428...3,359,969
Ensembl chr12:3,297,428...3,359,969 		JBrowse link
G Rab18 RAB18, member RAS oncogene family involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:6,765,167...6,791,606
Ensembl chr18:6,733,905...6,794,429 		JBrowse link
G Reep1 receptor accessory protein 1 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 6:71,684,413...71,787,694
Ensembl chr 6:71,684,545...71,787,694 		JBrowse link
G Reep2 receptor accessory protein 2 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr18:34,973,642...34,980,516
Ensembl chr18:34,973,642...34,980,516 		JBrowse link
G Reep3 receptor accessory protein 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:66,844,968...66,932,767
Ensembl chr10:66,844,968...66,932,724 		JBrowse link
G Reep4 receptor accessory protein 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:70,782,666...70,786,375
Ensembl chr14:70,782,691...70,786,373 		JBrowse link
G Retreg3 reticulophagy regulator family member 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:100,987,148...101,010,720
Ensembl chr11:100,987,148...101,010,719 		JBrowse link
G Rtn3 reticulon 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:7,403,260...7,460,656
Ensembl chr19:7,403,266...7,460,646 		JBrowse link
G Rtn4 reticulon 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:29,642,898...29,694,414
Ensembl chr11:29,642,947...29,694,331 		JBrowse link
G Tmem170 transmembrane protein 170 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 8:112,589,670...112,603,378
Ensembl chr 8:112,589,670...112,603,382 		JBrowse link
G Tmem33 transmembrane protein 33 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:67,417,908...67,448,804
Ensembl chr 5:67,417,908...67,448,804 		JBrowse link
G Use1 unconventional SNARE in the ER 1 homolog (S. cerevisiae) acts_upstream_of_or_within IMP (PMID:19188447) MGI PMID:19188447 NCBI chr 8:71,819,329...71,822,376
Ensembl chr 8:71,819,492...71,822,376 		JBrowse link
endoplasmic reticulum tubular network formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl6ip1 ADP-ribosylation factor-like 6 interacting protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:117,718,113...117,728,848
Ensembl chr 7:117,718,114...117,728,885 		JBrowse link
G Rtn1 reticulon 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:72,258,523...72,455,828
Ensembl chr12:72,258,526...72,455,828 		JBrowse link
G Rtn3 reticulon 3 involved_in IDA
IBA
ISO		 (MGI:5770041|PMID:24262037) UniProt
GO_Central
MGI		 PMID:24262037 GO_REF:0000033 GO_REF:0000119 MGI:4834177 MGI:5770041 NCBI chr19:7,403,260...7,460,656
Ensembl chr19:7,403,266...7,460,646 		JBrowse link
G Rtn4 reticulon 4 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:29,642,898...29,694,414
Ensembl chr11:29,642,947...29,694,331 		JBrowse link
G Zfyve27 zinc finger, FYVE domain containing 27 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr19:42,159,006...42,183,032
Ensembl chr19:42,152,390...42,183,029 		JBrowse link
endoplasmic reticulum tubular network maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lnpk lunapark, ER junction formation factor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:74,345,180...74,409,802
Ensembl chr 2:74,350,635...74,409,779 		JBrowse link
endoplasmic reticulum tubular network membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl6ip1 ADP-ribosylation factor-like 6 interacting protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:117,718,113...117,728,848
Ensembl chr 7:117,718,114...117,728,885 		JBrowse link
G Atl1 atlastin GTPase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:69,939,879...70,010,859
Ensembl chr12:69,939,388...70,013,191 		JBrowse link
G Atl2 atlastin GTPase 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:80,155,819...80,203,633
Ensembl chr17:80,155,819...80,203,552 		JBrowse link
G Rtn4 reticulon 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:29,642,898...29,694,414
Ensembl chr11:29,642,947...29,694,331 		JBrowse link
positive regulation of endoplasmic reticulum tubular network organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atl3 atlastin GTPase 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:7,471,178...7,515,974
Ensembl chr19:7,471,405...7,517,039 		JBrowse link
G Lnpk lunapark, ER junction formation factor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:74,345,180...74,409,802
Ensembl chr 2:74,350,635...74,409,779 		JBrowse link
G Rab3gap1 RAB3 GTPase activating protein subunit 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:127,796,492...127,871,612
Ensembl chr 1:127,796,510...127,871,605 		JBrowse link
G Rab3gap2 RAB3 GTPase activating protein subunit 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:184,936,287...185,018,953
Ensembl chr 1:184,936,314...185,018,956 		JBrowse link
regulation of endoplasmic reticulum tubular network organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl6ip1 ADP-ribosylation factor-like 6 interacting protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:117,718,113...117,728,848
Ensembl chr 7:117,718,114...117,728,885 		JBrowse link
G Tmem33 transmembrane protein 33 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:67,417,908...67,448,804
Ensembl chr 5:67,417,908...67,448,804 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28573
    cellular process 17593
      cellular component organization or biogenesis 6936
        cellular component organization 6712
          endomembrane system organization 582
            endoplasmic reticulum organization 99
              endoplasmic reticulum tubular network organization 21
                endoplasmic reticulum tubular network formation 5
                endoplasmic reticulum tubular network maintenance 1
                endoplasmic reticulum tubular network membrane organization 4
                negative regulation of endoplasmic reticulum tubular network organization 0
                positive regulation of endoplasmic reticulum tubular network organization 4
                regulation of endoplasmic reticulum tubular network organization + 6
paths to the root