Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:endoplasmic reticulum tubular network organization
go back to main search page
Accession:GO:0071786 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum (ER) tubular network. The ER tubular network is the ER part that that has membranes with high curvature in cross-section.
Synonyms:exact_synonym: ER tubular network organisation;   ER tubular network organization;   endoplasmic reticulum tubular network organisation



show annotations for term's descendants           Sort by:
 
endoplasmic reticulum tubular network organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lnpk lunapark, ER junction formation factor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:59,418,872...59,487,029
Ensembl chr 3:59,424,286...59,486,518
JBrowse link
G Rab10 RAB10, member RAS oncogene family involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:23263280), (PMID:24891604)
UniProt
Ensembl
RGD
PMID:23263280 PMID:24891604 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:26,267,081...26,319,739
Ensembl chr 6:26,266,859...26,320,193
JBrowse link
G Rab18 RAB18, member RAS oncogene family involved_in ISO (PMID:24891604) RGD PMID:24891604 NCBI chr17:54,944,099...54,976,093
Ensembl chr17:54,943,955...54,976,043
JBrowse link
G Reep1 receptor accessory protein 1 involved_in ISO
IBA
(PMID:20200447)
PMID:21873635
RGD PMID:20200447 PMID:21873635 RGD:13792537 NCBI chr 4:103,746,004...103,862,347
Ensembl chr 4:103,745,633...103,862,338
JBrowse link
G Reep2 receptor accessory protein 2 involved_in ISO (PMID:24388663) RGD PMID:24388663 NCBI chr18:26,438,130...26,447,165
Ensembl chr18:26,438,346...26,447,161
JBrowse link
G Reep3 receptor accessory protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:21,493,868...21,578,698
Ensembl chr20:21,493,954...21,578,697
JBrowse link
G Reep4 receptor accessory protein 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:45,620,317...45,623,524
Ensembl chr15:45,619,941...45,623,526
JBrowse link
G Rtn3 reticulon 3 involved_in ISO (PMID:18779370) RGD PMID:18779370 NCBI chr 1:204,612,675...204,669,212
Ensembl chr 1:204,612,675...204,669,275
JBrowse link
G Rtn4 reticulon 4 involved_in ISO
ISS
(PMID:18779370), (PMID:26906412)
GO_REF:0000024
RGD
UniProt
PMID:18779370 PMID:26906412 GO_REF:0000024 NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
JBrowse link
G Tmem170a transmembrane protein 170A involved_in ISO
IBA
(PMID:26906412)
PMID:21873635
RGD PMID:26906412 PMID:21873635 RGD:13792537 NCBI chr19:39,833,947...39,846,807
Ensembl chr19:39,833,980...39,846,783
JBrowse link
G Tmem33 transmembrane protein 33 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:40,888,485...40,910,715
Ensembl chr14:40,885,712...40,910,715
JBrowse link
G Use1 unconventional SNARE in the ER 1 acts_upstream_of_or_within ISO MGI:3842569|MGI:3842571 (MGI:3842069|PMID:19188447) RGD PMID:19188447 MGI:3842069 NCBI chr16:18,038,284...18,041,826
Ensembl chr16:18,039,173...18,041,826
JBrowse link
endoplasmic reticulum tubular network formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl6ip1 ADP-ribosylation factor like GTPase 6 interacting protein 1 involved_in ISO (PMID:24262037) RGD PMID:24262037 NCBI chr 1:172,430,475...172,439,990
Ensembl chr 1:172,430,489...172,439,994
JBrowse link
G Rtn3 reticulon 3 involved_in ISO
IBA
(PMID:25612671)
PMID:21873635
(MGI:5770041|PMID:24262037)
RGD PMID:24262037 PMID:25612671 PMID:21873635 MGI:5770041, RGD:13792537 NCBI chr 1:204,612,675...204,669,212
Ensembl chr 1:204,612,675...204,669,275
JBrowse link
G Rtn4 reticulon 4 involved_in ISO
IBA
ISS
IEA
(PMID:24262037), (PMID:25612671)
PMID:21873635
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:24262037 PMID:25612671 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
JBrowse link
G Zfyve27 zinc finger FYVE-type containing 27 involved_in IBA
IEA
ISS
ISO
PMID:21873635
GO_REF:0000002
GO_REF:0000024
(PMID:23969831), (PMID:24668814)
InterPro
UniProt
RGD
PMID:23969831 PMID:24668814 PMID:21873635 GO_REF:0000002 GO_REF:0000024, RGD:13792537 NCBI chr 1:240,979,831...241,003,193
Ensembl chr 1:240,979,842...241,003,193
JBrowse link
endoplasmic reticulum tubular network maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lnpk lunapark, ER junction formation factor involved_in ISO (PMID:25548161), (PMID:27619977) RGD PMID:25548161 PMID:27619977 NCBI chr 3:59,418,872...59,487,029
Ensembl chr 3:59,424,286...59,486,518
JBrowse link
endoplasmic reticulum tubular network membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl6ip1 ADP-ribosylation factor like GTPase 6 interacting protein 1 involved_in ISO (PMID:24262037) RGD PMID:24262037 NCBI chr 1:172,430,475...172,439,990
Ensembl chr 1:172,430,489...172,439,994
JBrowse link
G Atl1 atlastin GTPase 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:27619977)
UniProt
RGD
PMID:27619977 GO_REF:0000024 NCBI chr 6:88,377,168...88,475,242
Ensembl chr 6:88,377,239...88,475,204
JBrowse link
G Atl2 atlastin GTPase 2 involved_in ISO (PMID:27619977) RGD PMID:27619977 NCBI chr 6:15,139,071...15,180,421
Ensembl chr 6:15,139,044...15,180,421
JBrowse link
G Rtn4 reticulon 4 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:27619977)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:27619977 GO_REF:0000024 GO_REF:0000107 NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
JBrowse link
positive regulation of endoplasmic reticulum tubular network organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atl3 atlastin GTPase 3 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:27619977)
UniProt
Ensembl
RGD
PMID:27619977 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:204,680,958...204,727,360
Ensembl chr 1:204,680,968...204,723,354
JBrowse link
G Lnpk lunapark, ER junction formation factor involved_in ISO (PMID:24223779), (PMID:25404289) RGD PMID:24223779 PMID:25404289 NCBI chr 3:59,418,872...59,487,029
Ensembl chr 3:59,424,286...59,486,518
JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISO
ISS
(PMID:24891604)
GO_REF:0000024
RGD
ParkinsonsUK-UCL
PMID:24891604 GO_REF:0000024 NCBI chr13:39,355,698...39,429,154
Ensembl chr13:39,352,247...39,429,169
JBrowse link
G Rab3gap2 RAB3 GTPase activating non-catalytic protein subunit 2 involved_in ISO
IEA
(PMID:24891604)
GO_REF:0000107
RGD
Ensembl
PMID:24891604 GO_REF:0000107 NCBI chr13:96,757,430...96,828,930
Ensembl chr13:96,757,460...96,829,478
JBrowse link
regulation of endoplasmic reticulum tubular network organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl6ip1 ADP-ribosylation factor like GTPase 6 interacting protein 1 involved_in ISO (PMID:24262037) RGD PMID:24262037 NCBI chr 1:172,430,475...172,439,990
Ensembl chr 1:172,430,489...172,439,994
JBrowse link
G Tmem33 transmembrane protein 33 involved_in ISO
ISS
(PMID:25612671)
GO_REF:0000024
RGD
UniProt
PMID:25612671 GO_REF:0000024 NCBI chr14:40,888,485...40,910,715
Ensembl chr14:40,885,712...40,910,715
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18737
    cellular process 17430
      cellular component organization or biogenesis 6534
        cellular component organization 6309
          endomembrane system organization 537
            endoplasmic reticulum organization 94
              endoplasmic reticulum tubular network organization 19
                endoplasmic reticulum tubular network formation 4
                endoplasmic reticulum tubular network maintenance 1
                endoplasmic reticulum tubular network membrane organization 4
                negative regulation of endoplasmic reticulum tubular network organization 0
                positive regulation of endoplasmic reticulum tubular network organization 4
                regulation of endoplasmic reticulum tubular network organization + 6
paths to the root