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ONTOLOGY REPORT - ANNOTATIONS

Term:ectodermal placode morphogenesis
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Accession:GO:0071697 term browser browse the term
Definition:The process in which the anatomical structures of an ectodermal placode are generated and organized. An ectodermal placode is a thickening of the ectoderm that is the primordium of many structures derived from the ectoderm.

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hair follicle placode formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11371349)
(PMID:19619491)		 Ensembl
MGI		 PMID:11371349 PMID:19619491 GO_REF:0000107 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293 		JBrowse link
G Eda ectodysplasin A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19619491) Ensembl
MGI		 PMID:19619491 GO_REF:0000107 NCBI chrNW_004936777:1,545,293...1,561,109
Ensembl chrNW_004936777:1,238,272...1,557,410 		JBrowse link
G Hdac1 histone deacetylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:15,320,635...15,351,418
Ensembl chrNW_004936474:15,320,729...15,350,860 		JBrowse link
G Hdac2 histone deacetylase 2 involved_in ISO (MGI:4889029|PMID:21093383) BHF-UCL PMID:21093383 MGI:4889029 NCBI chrNW_004936679:2,448,676...2,474,641
Ensembl chrNW_004936679:2,448,390...2,474,641 		JBrowse link
G LOC101971027 neuroendocrine secretory protein 55 involved_in ISO (PMID:12719376) UniProt PMID:12719376 NCBI chrNW_004936530:1,353,432...1,407,437 JBrowse link
lens placode formation involved in camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Frs2 fibroblast growth factor receptor substrate 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15569927) Ensembl
MGI		 PMID:15569927 GO_REF:0000107 NCBI chrNW_004936545:7,286,018...7,407,623
Ensembl chrNW_004936545:7,396,023...7,407,637 		JBrowse link
G Prox1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936628:4,185,712...4,240,680
Ensembl chrNW_004936628:4,185,706...4,238,451 		JBrowse link
mammary placode formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101957192 pro-neuregulin-3, membrane-bound isoform acts_upstream_of_or_within ISO (PMID:10723730) MGI PMID:10723730 NCBI chrNW_004936716:1,362,574...2,391,432 JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (PMID:19503830) MGI PMID:19503830 NCBI chrNW_004936587:5,065,200...5,143,029
Ensembl chrNW_004936587:4,978,043...5,140,191 		JBrowse link
G Tbx2 T-box transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16222716) Ensembl
MGI		 PMID:16222716 GO_REF:0000107 NCBI chrNW_004936490:2,769,264...2,778,342
Ensembl chrNW_004936490:2,769,231...2,805,238 		JBrowse link
G Tbx3 T-box transcription factor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16222716)
(PMID:17071745)		 Ensembl
MGI		 PMID:16222716 PMID:17071745 GO_REF:0000107 NCBI chrNW_004936558:7,230,361...7,243,651
Ensembl chrNW_004936558:7,230,668...7,244,361 		JBrowse link
negative regulation of hair follicle placode formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk4 dickkopf WNT signaling pathway inhibitor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18508042) Ensembl
MGI		 PMID:18508042 GO_REF:0000107 NCBI chrNW_004936785:319,494...323,226
Ensembl chrNW_004936785:319,494...323,055 		JBrowse link
olfactory placode formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou2f1 POU class 2 homeobox 1 acts_upstream_of_or_within ISO (PMID:17140559) MGI PMID:17140559 NCBI chrNW_004936481:18,607,212...18,679,828
Ensembl chrNW_004936481:18,617,572...18,678,183 		JBrowse link
G Six1 SIX homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:4,839,496...4,842,906
Ensembl chrNW_004936495:4,838,051...4,842,994 		JBrowse link
G Six4 SIX homeobox 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:4,887,718...4,900,198
Ensembl chrNW_004936495:4,887,718...4,900,198 		JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:17140559) MGI PMID:17140559 NCBI chrNW_004936566:1,630,698...1,632,607
Ensembl chrNW_004936566:1,631,822...1,632,613 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15871
    developmental process 6321
      anatomical structure morphogenesis 2769
        ectodermal placode morphogenesis 16
          ectodermal placode formation + 16
          olfactory placode morphogenesis + 4
Path 2
Term Annotations click to browse term
  biological_process 15871
    developmental process 6321
      anatomical structure development 5953
        anatomical structure morphogenesis 2769
          ectodermal placode morphogenesis 16
            ectodermal placode formation + 16
            olfactory placode morphogenesis + 4
paths to the root