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ONTOLOGY REPORT - ANNOTATIONS


Term:ectodermal placode morphogenesis
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Accession:GO:0071697 term browser browse the term
Definition:The process in which the anatomical structures of an ectodermal placode are generated and organized. An ectodermal placode is a thickening of the ectoderm that is the primordium of many structures derived from the ectoderm.



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hair follicle placode formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO MGI:1195272|MGI:2148594|MGI:2148596 (MGI:1934694|PMID:11371349), (MGI:4355652|PMID:19619491) RGD PMID:11371349 PMID:19619491 MGI:1934694 MGI:4355652 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Eda ectodysplasin-A acts_upstream_of_or_within ISO MGI:88276 (MGI:4355652|PMID:19619491) RGD PMID:19619491 MGI:4355652 NCBI chr  X:65,078,454...65,480,172
Ensembl chr  X:65,078,673...65,480,172
JBrowse link
G Gnas GNAS complex locus involved_in ISO (PMID:12719376) RGD PMID:12719376 NCBI chr 3:163,071,003...163,136,350
Ensembl chr 3:163,071,417...163,127,262
Ensembl chr 3:163,071,417...163,127,262
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO UniProtKB:P70288 (MGI:4889029|PMID:21093383) RGD PMID:21093383 MGI:4889029 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hdac2 histone deacetylase 2 involved_in ISO UniProtKB:O09106 (MGI:4889029|PMID:21093383) RGD PMID:21093383 MGI:4889029 NCBI chr20:40,548,250...40,571,609
Ensembl chr20:40,548,250...40,571,609
JBrowse link
lens placode formation involved in camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Frs2 fibroblast growth factor receptor substrate 2 acts_upstream_of_or_within ISO MGI:3521833 (MGI:3513737|PMID:15569927) RGD PMID:15569927 MGI:3513737 NCBI chr 7:52,711,255...52,792,758
Ensembl chr 7:52,711,257...52,792,743
JBrowse link
G Prox1 prospero homeobox 1 acts_upstream_of_or_within ISO (PMID:11850194) RGD PMID:11850194 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
JBrowse link
mammary placode formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191 (MGI:3849913|PMID:19503830) RGD PMID:19503830 MGI:3849913 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497
JBrowse link
G Nrg3 neuregulin 3 acts_upstream_of_or_within ISO MGI:1889610 (MGI:1353819|PMID:10723730) RGD PMID:10723730 MGI:1353819 NCBI chr16:14,229,270...15,352,505
Ensembl chr16:14,235,157...15,352,368
JBrowse link
G Tbx2 T-box transcription factor 2 acts_upstream_of_or_within ISO MGI:98495 (MGI:3608166|PMID:16222716) RGD PMID:16222716 MGI:3608166 NCBI chr10:70,679,670...70,688,868
Ensembl chr10:70,679,518...70,688,529
JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO MGI:98494 (MGI:3608166|PMID:16222716), (MGI:3695659|PMID:17071745) RGD PMID:16222716 PMID:17071745 MGI:3608166 MGI:3695659 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708
JBrowse link
negative regulation of hair follicle placode formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk4 dickkopf WNT signaling pathway inhibitor 4 acts_upstream_of_or_within ISO (MGI:3805070|PMID:18508042) RGD PMID:18508042 MGI:3805070 NCBI chr16:69,402,989...69,406,580
Ensembl chr16:69,402,989...69,406,580
JBrowse link
olfactory placode formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou2f1 POU class 2 homeobox 1 acts_upstream_of_or_within ISO MGI:98364 (MGI:3701404|PMID:17140559) RGD PMID:17140559 MGI:3701404 NCBI chr13:78,120,617...78,263,306
Ensembl chr13:78,130,685...78,263,363
JBrowse link
G Six1 SIX homeobox 1 involved_in ISO (MGI:3833798|PMID:19027001) RGD PMID:19027001 MGI:3833798 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:3833798|PMID:19027001) RGD PMID:19027001 MGI:3833798 NCBI chr 6:91,802,328...91,816,062
Ensembl chr 6:91,802,329...91,815,992
JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO MGI:101898 (MGI:3701404|PMID:17140559) RGD PMID:17140559 MGI:3701404 NCBI chr 2:117,536,929...117,539,338
Ensembl chr 2:117,536,929...117,539,338
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18877
    developmental process 6926
      anatomical structure morphogenesis 2992
        ectodermal placode morphogenesis 16
          ectodermal placode formation + 16
          olfactory placode morphogenesis + 4
Path 2
Term Annotations click to browse term
  biological_process 18877
    developmental process 6926
      anatomical structure development 6400
        anatomical structure morphogenesis 2992
          ectodermal placode morphogenesis 16
            ectodermal placode formation + 16
            olfactory placode morphogenesis + 4
paths to the root