Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:vocalization behavior
go back to main search page
Accession:GO:0071625 term browser browse the term
Definition:The behavior in which an organism produces sounds by a mechanism involving its respiratory system.
Synonyms:exact_synonym: vocalisation behaviour


show annotations for term's descendants           Sort by:
vocalization behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brinp1 BMP/retinoic acid inducible neural specific 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5604542 (MGI:5770105|PMID:27042284)		 Ensembl
RGD		 PMID:27042284 GO_REF:0000107 MGI:5770105 NCBI chr 5:82,348,501...82,550,506
Ensembl chr 5:82,348,930...82,493,150 		JBrowse link
G Celf6 CUGBP, Elav-like family member 6 acts_upstream_of_or_within ISO MGI:5494708 (MGI:5471883|PMID:23407934) RGD PMID:23407934 MGI:5471883 NCBI chr 8:59,975,095...60,006,060
Ensembl chr 8:59,975,088...60,005,041 		JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:18179893), (PMID:19896112)
MGI:2677631 (MGI:5906519|PMID:26273832)		 RGD PMID:18179893 PMID:19896112 PMID:26273832 MGI:5906519 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027 		JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5285520|PMID:20952458)		 BHF-UCL
RGD		 PMID:20952458 GO_REF:0000024 MGI:5285520 NCBI chr10:54,740,700...54,769,097
Ensembl chr10:54,739,470...54,767,153 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (MGI:5315031|PMID:22411800) RGD PMID:22411800 MGI:5315031 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Foxp2 forkhead box P2 involved_in ISO MGI:3778383 (MGI:5306536|PMID:22133810) RGD PMID:22133810 MGI:5306536 NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276 (MGI:5897919|PMID:28177282) RGD PMID:28177282 MGI:5897919 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Myh14 myosin heavy chain 14 involved_in ISO (PMID:21480433) RGD PMID:21480433 NCBI chr 1:95,096,266...95,158,861
Ensembl chr 1:95,096,266...95,158,836 		JBrowse link
G Nlgn3 neuroligin 3 involved_in ISO
IEA		 (PMID:12669065)
GO_REF:0000107		 RGD
Ensembl		 PMID:12669065 GO_REF:0000107 NCBI chr  X:66,427,926...66,457,378
Ensembl chr  X:66,429,458...66,451,876 		JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (PMID:17034946), (PMID:18057082), (PMID:19896112) RGD PMID:17034946 PMID:18057082 PMID:19896112 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710 		JBrowse link
G Nrxn2 neurexin 2 involved_in ISO (PMID:21424692) RGD PMID:21424692 NCBI chr 1:203,726,420...203,842,301
Ensembl chr 1:203,735,753...203,842,297 		JBrowse link
G Nrxn3 neurexin 3 involved_in ISO UniProtKB:Q9HDB5|UniProtKB:Q9Y4C0 (PMID:22209245) RGD PMID:22209245 NCBI chr 6:107,641,760...109,272,849
Ensembl chr 6:107,641,780...109,272,044 		JBrowse link
G Shank1 SH3 and multiple ankyrin repeat domains 1 involved_in ISO (PMID:22503632)
(MGI:5086047|PMID:21695253)		 RGD PMID:21695253 PMID:22503632 MGI:5086047 NCBI chr 1:94,807,879...94,857,356
Ensembl chr 1:94,808,276...94,855,824 		JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5432970|PMID:22699620)
(PMID:20473310)		 BHF-UCL
RGD		 PMID:20473310 PMID:22699620 GO_REF:0000024 MGI:5432970 NCBI chr 1:199,146,210...199,590,962
Ensembl chr 1:199,169,429...199,589,394 		JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 GO_REF:0000107
MGI:5056336 (MGI:5013997|PMID:21558424)
(MGI:5285139|PMID:21167025)
GO_REF:0000024
(PMID:17173049), (PMID:21378602)		 Ensembl
RGD
BHF-UCL		 PMID:17173049 PMID:21167025 PMID:21378602 PMID:21558424 GO_REF:0000024 GO_REF:0000107 MGI:5013997 MGI:5285139 NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374 		JBrowse link
G Srpx2 sushi-repeat-containing protein, X-linked 2 involved_in ISO (MGI:5527007|PMID:24179158) RGD PMID:24179158 MGI:5527007 NCBI chr  X:97,106,455...97,132,197
Ensembl chr  X:97,106,561...97,132,195 		JBrowse link
innate vocalization behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Auts2 activator of transcription and developmental regulator AUTS2 acts_upstream_of_or_within ISO (MGI:5615311|PMID:25519132) RGD PMID:25519132 MGI:5615311 NCBI chr12:24,104,187...25,194,123
Ensembl chr12:24,104,192...25,194,416 		JBrowse link
G Foxp1 forkhead box P1 acts_upstream_of ISO MGI:3711150 (MGI:5697988|PMID:26494785) RGD PMID:26494785 MGI:5697988 NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258 		JBrowse link
G Foxp2 forkhead box P2 IMP RGD PMID:23426656 RGD:11536005 NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683 		JBrowse link
learned vocalization behavior term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neurog1 neurogenin 1 involved_in ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571 		JBrowse link
G Tifab TIFA inhibitor involved_in ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,433,406...8,436,541
Ensembl chr17:8,431,635...8,436,592 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19738
    multicellular organismal process 9179
      behavior 826
        vocalization behavior 20
          innate vocalization behavior 3
          learned vocalization behavior 2
paths to the root