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ONTOLOGY REPORT - ANNOTATIONS


Term:otic vesicle development
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Accession:GO:0071599 term browser browse the term
Definition:The process whose specific outcome is the progression of the otic vesicle over time, from its formation to the mature structure. The otic vesicle is a transient embryonic structure formed during development of the vertebrate inner ear.



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otic vesicle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 involved_in IGI (MGI:5306539|PMID:21959375) UniProt PMID:21959375 MGI:5306539 NCBI chr10:20,827,274...20,956,328
Ensembl chr10:20,828,446...20,956,328
JBrowse link
G Col2a1 collagen, type II, alpha 1 acts_upstream_of_or_within IEP (PMID:9119111) UniProt PMID:9119111 NCBI chr15:97,873,483...97,902,722
Ensembl chr15:97,873,483...97,902,576
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within IGI (MGI:5319720|PMID:22513373) MGI PMID:22513373 MGI:5319720 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459
JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within IMP (MGI:1928163|PMID:11135239) MGI PMID:11135239 MGI:1928163 NCBI chr 2:9,861,889...9,892,762
Ensembl chr 2:9,861,889...9,894,845
JBrowse link
G Get1 guided entry of tail-anchored proteins factor 1 acts_upstream_of_or_within IMP (MGI:5817553|PMID:27458190) MGI PMID:27458190 MGI:5817553 NCBI chr16:95,946,600...95,959,052
Ensembl chr16:95,946,607...95,959,052
JBrowse link
G Pax8 paired box 8 involved_in ISO (PMID:15494458) UniProt PMID:15494458 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611
JBrowse link
G Six1 sine oculis-related homeobox 1 acts_upstream_of_or_within IGI
IMP
(MGI:5319720|PMID:22513373)
(MGI:3702803|PMID:16916509)
MGI PMID:16916509 PMID:22513373 MGI:3702803 MGI:5319720 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661
JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IEP (PMID:9119111) UniProt PMID:9119111 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586
JBrowse link
otic vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within
TAS
IGI
(MGI:5424107|PMID:22235191)
(MGI:2683889|PMID:14623822)
ParkinsonsUK-UCL
MGI
PMID:14623822 PMID:22235191 MGI:2683889 MGI:5424107 NCBI chr13:118,851,235...118,929,109
Ensembl chr13:118,806,327...118,928,651
JBrowse link
G Fgf3 fibroblast growth factor 3 involved_in
acts_upstream_of_or_within
TAS
IGI
(MGI:5424107|PMID:22235191)
(MGI:3720541|PMID:17601531)
ParkinsonsUK-UCL
MGI
PMID:17601531 PMID:22235191 MGI:3720541 MGI:5424107 NCBI chr 7:144,392,349...144,397,085
Ensembl chr 7:144,391,820...144,398,173
JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within
TAS
IGI
(MGI:5424107|PMID:22235191)
(MGI:3720541|PMID:17601531)
ParkinsonsUK-UCL
MGI
PMID:17601531 PMID:22235191 MGI:3720541 MGI:5424107 NCBI chr19:45,724,930...45,731,506
Ensembl chr19:45,725,237...45,731,354
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within
involved_in
IMP
TAS
(MGI:1197797|PMID:9435295)
(MGI:5424107|PMID:22235191)
MGI
ParkinsonsUK-UCL
PMID:9435295 PMID:22235191 MGI:1197797 MGI:5424107 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079
JBrowse link
G Hesx1 homeobox gene expressed in ES cells acts_upstream_of_or_within IMP (MGI:1206234|PMID:9620767) MGI PMID:9620767 MGI:1206234 NCBI chr14:26,716,375...26,724,286
Ensembl chr14:26,716,373...26,724,286
JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IMP (MGI:3795349|PMID:18377888) MGI PMID:18377888 MGI:3795349 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586
JBrowse link
G Tcap titin-cap acts_upstream_of_or_within IEP (PMID:9817758) BHF-UCL PMID:9817758 NCBI chr11:98,274,637...98,275,779
Ensembl chr11:98,274,637...98,275,779
JBrowse link
otic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 acts_upstream_of_or_within IMP (MGI:3702803|PMID:16916509) MGI PMID:16916509 MGI:3702803 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459
JBrowse link
G Tbx1 T-box 1 acts_upstream_of_or_within IMP (MGI:3703494|PMID:17074316) MGI PMID:17074316 MGI:3703494 NCBI chr16:18,399,729...18,409,421
Ensembl chr16:18,399,729...18,409,421
JBrowse link
positive regulation of otic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stox1 storkhead box 1 involved_in IMP (MGI:5635320|PMID:25677106) UniProt PMID:25677106 MGI:5635320 NCBI chr10:62,494,822...62,561,907
Ensembl chr10:62,494,822...62,561,907
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28749
    developmental process 7255
      anatomical structure development 6681
        tube development 1358
          otic vesicle development 16
            otic vesicle morphogenesis + 10
Path 2
Term Annotations click to browse term
  biological_process 28749
    developmental process 7255
      anatomical structure development 6681
        animal organ development 4346
          sensory organ development 713
            ear development 278
              inner ear development 247
                otic vesicle development 16
                  otic vesicle morphogenesis + 10
paths to the root