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ONTOLOGY REPORT - ANNOTATIONS

Term:otic vesicle development
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Accession:GO:0071599 term browser browse the term
Definition:The process whose specific outcome is the progression of the otic vesicle over time, from its formation to the mature structure. The otic vesicle is a transient embryonic structure formed during development of the vertebrate inner ear.


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otic vesicle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHI1 Abelson helper integration site 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:135,283,532...135,497,740
Ensembl chr 6:135,283,407...135,498,434 		JBrowse link
G COL2A1 collagen type II alpha 1 chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:47,972,967...48,006,212
Ensembl chr12:47,972,967...48,004,554 		JBrowse link
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22513373) Ensembl
MGI		 PMID:22513373 GO_REF:0000107 NCBI chr 8:71,197,433...71,548,094
Ensembl chr 8:71,197,433...71,592,025 		JBrowse link
G GATA3 GATA binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11135239) Ensembl
MGI		 PMID:11135239 GO_REF:0000107 NCBI chr10:8,045,333...8,075,198
Ensembl chr10:8,045,378...8,075,198 		JBrowse link
G GET1 guided entry of tail-anchored proteins factor 1 acts_upstream_of_or_within ISO (PMID:27458190) MGI PMID:27458190 NCBI chr21:39,380,326...39,428,528
Ensembl chr21:39,377,698...39,428,528 		JBrowse link
G PAX8 paired box 8 involved_in IEP (PMID:15494458) UniProt PMID:15494458 NCBI chr 2:113,215,997...113,278,921
Ensembl chr 2:113,215,997...113,278,921 		JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22513373)
(PMID:16916509)		 Ensembl
MGI		 PMID:16916509 PMID:22513373 GO_REF:0000107 NCBI chr14:60,643,421...60,649,477
Ensembl chr14:60,643,421...60,658,259 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416 		JBrowse link
otic placode formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PROX1 prospero homeobox 1 involved_in ISS (PMID:11789987) BHF-UCL PMID:11789987 NCBI chr 1:213,983,151...214,041,510
Ensembl chr 1:213,983,181...214,041,510 		JBrowse link
otic vesicle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEP290 centrosomal protein 290 involved_in ISS (PMID:16682973) HGNC-UCL PMID:16682973 NCBI chr12:88,049,016...88,142,088
Ensembl chr12:88,049,016...88,142,099 		JBrowse link
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14623822) Ensembl
MGI		 PMID:14623822 GO_REF:0000107 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706 		JBrowse link
G FGF3 fibroblast growth factor 3 acts_upstream_of_or_within ISO (PMID:17601531) MGI PMID:17601531 NCBI chr11:69,809,968...69,819,416
Ensembl chr11:69,809,968...69,819,416 		JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17601531) Ensembl
MGI		 PMID:17601531 GO_REF:0000107 NCBI chr10:101,770,109...101,780,369
Ensembl chr10:101,770,109...101,780,371 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:9435295) UniProt
MGI		 PMID:9435295 GO_REF:0000024 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458 		JBrowse link
G HESX1 HESX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9620767) Ensembl
MGI		 PMID:9620767 GO_REF:0000107 NCBI chr 3:57,197,838...57,227,615
Ensembl chr 3:57,197,838...57,227,606 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 (PMID:18377888) UniProt
MGI
Ensembl		 PMID:18377888 GO_REF:0000024 GO_REF:0000107 NCBI chr17:72,121,020...72,126,416
Ensembl chr17:72,121,020...72,126,416 		JBrowse link
G TCAP titin-cap involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:39,665,349...39,666,554
Ensembl chr17:39,665,349...39,666,554 		JBrowse link
otic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EYA1 EYA transcriptional coactivator and phosphatase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16916509) Ensembl
MGI		 PMID:16916509 GO_REF:0000107 NCBI chr 8:71,197,433...71,548,094
Ensembl chr 8:71,197,433...71,592,025 		JBrowse link
G TBX1 T-box transcription factor 1 acts_upstream_of_or_within ISO (PMID:17074316) MGI PMID:17074316 NCBI chr22:19,756,703...19,783,593
Ensembl chr22:19,756,703...19,783,593 		JBrowse link
positive regulation of otic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STOX1 storkhead box 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:68,827,531...68,895,432
Ensembl chr10:68,827,531...68,895,432 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19770
    developmental process 7667
      anatomical structure development 7073
        tube development 1437
          otic vesicle development 18
            otic vesicle morphogenesis + 12
Path 2
Term Annotations click to browse term
  biological_process 19770
    developmental process 7667
      anatomical structure development 7073
        animal organ development 3887
          sensory organ development 760
            ear development 286
              inner ear development 255
                otic vesicle development 18
                  otic vesicle morphogenesis + 12
paths to the root