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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to transforming growth factor beta stimulus
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Accession:GO:0071560 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a transforming growth factor beta stimulus.
Synonyms:exact_synonym: cellular response to TGF-beta stimulus;   cellular response to TGFbeta stimulus


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cellular response to transforming growth factor beta stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO RGD PMID:15629889 RGD:8693572 NCBI chrNW_004955513:652,048...799,182
Ensembl chrNW_004955513:653,252...799,239
JBrowse link
G Actr3 actin related protein 3 ISO RGD PMID:22319661 RGD:11530045 NCBI chrNW_004955459:15,216,914...15,284,013
Ensembl chrNW_004955459:15,216,914...15,284,013
JBrowse link
G Acvrl1 activin A receptor like type 1 involved_in ISO (PMID:19494318)
(MGI:3848261|PMID:19494318)
BHF-UCL PMID:19494318 MGI:3848261 NCBI chrNW_004955547:2,278,548...2,293,865
Ensembl chrNW_004955547:2,279,042...2,294,443
JBrowse link
G Ankrd1 ankyrin repeat domain 1 involved_in ISO (PMID:11139470) BHF-UCL PMID:11139470 NCBI chrNW_004955425:2,258,554...2,267,699
Ensembl chrNW_004955425:2,258,392...2,267,878
JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 ISO RGD PMID:11003619 RGD:2325753 NCBI chrNW_004955405:34,619,780...34,693,616
Ensembl chrNW_004955405:34,623,267...34,693,677
JBrowse link
G Arg1 arginase 1 ISO RGD PMID:12069499 RGD:634666 NCBI chrNW_004955436:12,235,767...12,247,817
Ensembl chrNW_004955436:12,235,767...12,251,972
JBrowse link
G Cav1 caveolin 1 acts_upstream_of_or_within ISO (MGI:5289760|PMID:21829547) MGI PMID:21829547 MGI:5289760 NCBI chrNW_004955432:22,258,262...22,292,403
Ensembl chrNW_004955432:22,258,250...22,292,403
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 ISO RGD PMID:20429874 RGD:4889909 NCBI chrNW_004955481:10,293,758...10,301,118
Ensembl chrNW_004955481:10,293,399...10,301,143
JBrowse link
G Cdkn2b cyclin dependent kinase inhibitor 2B ISO RGD PMID:11369440 RGD:11252200 NCBI chrNW_004955472:12,275,613...12,280,141
Ensembl chrNW_004955472:12,275,544...12,280,528
JBrowse link
G Cilp cartilage intermediate layer protein involved_in ISO (PMID:29167509) BHF-UCL PMID:29167509 NCBI chrNW_004955450:10,231,082...10,244,632
Ensembl chrNW_004955450:10,232,641...10,245,945
JBrowse link
G Cldn1 claudin 1 ISO RGD PMID:18031476 RGD:11344898 NCBI chrNW_004955420:17,798,974...17,815,049
Ensembl chrNW_004955420:17,798,974...17,815,205
JBrowse link
G Clec3b C-type lectin domain family 3 member B involved_in ISO (PMID:7589422) UniProt PMID:7589422 NCBI chrNW_004955420:26,665,472...26,669,474 JBrowse link
G Col1a1 collagen type I alpha 1 chain involved_in ISO PMID:19362560 RGD
UniProt
PMID:19362560 PMID:23560091 RGD:8552683 RGD:8554531 NCBI chrNW_004955451:11,468,156...11,484,410
Ensembl chrNW_004955451:11,468,290...11,483,073
JBrowse link
G Col4a2 collagen type IV alpha 2 chain acts_upstream_of_or_within ISO (PMID:17525254) UniProt PMID:17525254 NCBI chrNW_004955404:2,092,184...2,178,079
Ensembl chrNW_004955404:2,092,184...2,178,079
JBrowse link
G Creb1 cAMP responsive element binding protein 1 ISO RGD PMID:21308733 RGD:10059386 NCBI chrNW_004955457:7,424,403...7,490,630
Ensembl chrNW_004955457:7,431,736...7,491,149
JBrowse link
G Crk CRK proto-oncogene, adaptor protein ISO RGD PMID:12837295 RGD:11568682 NCBI chrNW_004955481:1,705,595...1,748,363
Ensembl chrNW_004955481:1,705,520...1,734,859
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein involved_in ISO (PMID:23959425) ARUK-UCL PMID:23959425 NCBI chrNW_004955442:19,358,202...19,388,552
Ensembl chrNW_004955442:19,358,081...19,388,815
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 ISO RGD PMID:12446007 RGD:4892023 NCBI chrNW_004955427:24,691,206...24,705,599
Ensembl chrNW_004955427:24,701,073...24,707,230
JBrowse link
G Dab2 DAB adaptor protein 2 ISO RGD PMID:21762377 RGD:7243156 NCBI chrNW_004955426:23,852,752...23,883,030 JBrowse link
G Dbn1 drebrin 1 ISO RGD PMID:22319661 RGD:11530045 NCBI chrNW_004955408:29,695,442...29,705,417
Ensembl chrNW_004955408:29,696,266...29,705,416
JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 ISO RGD PMID:16087782 RGD:150429767 NCBI chrNW_004955462:13,578,638...13,644,834
Ensembl chrNW_004955462:13,584,724...13,642,968
JBrowse link
G Dlx1 distal-less homeobox 1 involved_in ISO (PMID:14671321) UniProt PMID:14671321 NCBI chrNW_004955449:2,920,705...2,924,667
Ensembl chrNW_004955449:2,920,478...2,924,667
JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO RGD PMID:24211420 RGD:9588224 NCBI chrNW_004955495:1,465,529...1,505,379
Ensembl chrNW_004955495:1,465,480...1,505,462
JBrowse link
G Edn1 endothelin 1 ISO RGD PMID:8439651 RGD:8662306 NCBI chrNW_004955465:2,287,906...2,314,945
Ensembl chrNW_004955465:2,287,798...2,314,753
JBrowse link
G Eln elastin ISO RGD PMID:9224206 RGD:9585659 NCBI chrNW_004955456:13,788,992...13,818,836 JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:24157151 RGD:13204713 NCBI chrNW_004955436:12,416,147...12,477,214
Ensembl chrNW_004955436:12,415,737...12,480,359
JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO (MGI:3821807|PMID:18794329) MGI PMID:18794329 MGI:3821807 NCBI chrNW_004955459:9,641,926...9,783,718
Ensembl chrNW_004955459:9,641,884...9,784,173
JBrowse link
G Fbn1 fibrillin 1 ISO RGD PMID:11012893 RGD:7387263 NCBI chrNW_004955409:5,281,603...5,502,547
Ensembl chrNW_004955409:5,281,603...5,504,761
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO RGD PMID:12648559 RGD:12801436 NCBI chrNW_004955551:2,321,190...2,427,000 JBrowse link
G Fn1 fibronectin 1 ISO RGD PMID:16669970 RGD:1626090 NCBI chrNW_004955457:629,599...694,948
Ensembl chrNW_004955457:629,518...696,975
JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO (MGI:5289760|PMID:21829547) MGI PMID:21829547 MGI:5289760 NCBI chrNW_004955411:36,403,156...36,597,660
Ensembl chrNW_004955411:36,401,842...36,512,054
JBrowse link
G Hdac2 histone deacetylase 2 ISO RGD PMID:19553350 RGD:9590229 NCBI chrNW_004955526:2,739,099...2,759,640
Ensembl chrNW_004955526:2,728,377...2,759,707
JBrowse link
G Hyal2 hyaluronidase 2 involved_in ISO (PMID:19366691)
(MGI:3851310|PMID:19366691)
BHF-UCL PMID:19366691 MGI:3851310 NCBI chrNW_004955532:2,120,781...2,125,083
Ensembl chrNW_004955532:2,120,781...2,123,726
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein ISO RGD PMID:16628634 RGD:9686088 NCBI chrNW_004955422:29,337,969...29,339,178
Ensembl chrNW_004955422:29,337,757...29,339,178
JBrowse link
G Igf1r insulin like growth factor 1 receptor ISO RGD PMID:12837295 RGD:11568682 NCBI chrNW_004955416:26,101,090...26,382,660
Ensembl chrNW_004955416:26,102,628...26,382,666
JBrowse link
G L1cam L1 cell adhesion molecule ISO RGD PMID:16686695 RGD:6483452 NCBI chrNW_004955580:548,442...561,580
Ensembl chrNW_004955580:549,368...561,486
JBrowse link
G Lims1 LIM zinc finger domain containing 1 involved_in ISO (PMID:21390327) UniProt PMID:21390327 NCBI chrNW_004955470:12,142,997...12,158,273 JBrowse link
G LOC102014960 cholesterol side-chain cleavage enzyme, mitochondrial ISO FSH-stimulated granulosa cells RGD PMID:18511507 RGD:4781450 NCBI chrNW_004955450:3,433,310...3,484,462
Ensembl chrNW_004955450:3,474,491...3,484,232
JBrowse link
G Mapk7 mitogen-activated protein kinase 7 involved_in ISO (PMID:18588859) UniProt PMID:18588859 NCBI chrNW_004955467:381,801...387,078
Ensembl chrNW_004955467:378,156...386,532
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (PMID:9770491) UniProt PMID:9770491 NCBI chrNW_004955418:22,537,388...22,701,434
Ensembl chrNW_004955418:22,537,285...22,701,434
JBrowse link
G Muc4 mucin 4, cell surface associated ISO RGD PMID:9857062 RGD:2324952 NCBI chrNW_004955420:12,228,801...12,274,840 JBrowse link
G Nos3 nitric oxide synthase 3 ISO RGD PMID:21792926 RGD:8662393 NCBI chrNW_004955491:5,438,228...5,457,308
Ensembl chrNW_004955491:5,438,010...5,460,814
JBrowse link
G Nox4 NADPH oxidase 4 ISO RGD PMID:18845355 RGD:2324663 NCBI chrNW_004955414:4,062,337...4,220,032
Ensembl chrNW_004955414:4,062,081...4,212,746
JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 involved_in ISO (PMID:12902338) CAFA PMID:12902338 NCBI chrNW_004955415:10,494,704...10,585,778
Ensembl chrNW_004955415:10,494,640...10,586,221
JBrowse link
G Ovol2 ovo like zinc finger 2 involved_in ISO (MGI:6284898|PMID:28455959) ARUK-UCL PMID:28455959 MGI:6284898 NCBI chrNW_004955415:26,825,284...26,843,438
Ensembl chrNW_004955415:26,825,284...26,843,438
JBrowse link
G Pak2 p21 (RAC1) activated kinase 2 ISO RGD PMID:15629889 RGD:8693572 NCBI chrNW_004955420:12,893,760...12,930,955
Ensembl chrNW_004955420:12,892,845...12,930,955
JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 ISO RGD PMID:22073128 RGD:8554355 NCBI chrNW_004955489:520,875...557,609
Ensembl chrNW_004955489:520,875...557,615
JBrowse link
G Pdcd5 programmed cell death 5 involved_in ISO (PMID:24012345) UniProt PMID:24012345 NCBI chrNW_004955468:5,365,137...5,372,888 JBrowse link
G Pde2a phosphodiesterase 2A involved_in ISO (PMID:17704206) UniProt PMID:17704206 NCBI chrNW_004955414:18,765,591...18,826,717
Ensembl chrNW_004955414:18,735,822...18,827,236
JBrowse link
G Pde3a phosphodiesterase 3A involved_in ISO (PMID:17704206) UniProt PMID:17704206 NCBI chrNW_004955413:16,340,827...16,642,731
Ensembl chrNW_004955413:16,340,918...16,643,214
JBrowse link
G Pdgfa platelet derived growth factor subunit A ISO RGD PMID:16039137 RGD:1581755 NCBI chrNW_004955460:8,328,400...8,346,755
Ensembl chrNW_004955460:8,326,891...8,346,550
JBrowse link
G Pdgfd platelet derived growth factor D ISO RGD PMID:23585135 RGD:9854632 NCBI chrNW_004955412:6,868,995...7,093,353
Ensembl chrNW_004955412:6,866,869...7,093,998
JBrowse link
G Pdia3 protein disulfide isomerase family A member 3 ISO RGD PMID:15862831 RGD:9999173 NCBI chrNW_004955416:10,197,957...10,221,104
Ensembl chrNW_004955416:10,198,099...10,220,792
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 ISO RGD PMID:18466611 RGD:2311658 NCBI chrNW_004955478:7,448,584...7,531,860
Ensembl chrNW_004955478:7,478,492...7,531,188
JBrowse link
G Penk proenkephalin ISO RGD PMID:8584038 RGD:10003035 NCBI chrNW_004955454:15,425,712...15,426,685
Ensembl chrNW_004955454:15,426,017...15,426,685
JBrowse link
G Postn periostin ISO RGD PMID:22886209 RGD:10040993 NCBI chrNW_004955431:8,510,646...8,544,901
Ensembl chrNW_004955431:8,510,624...8,544,971
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO with follicle-stimulating hormone RGD PMID:18511507 RGD:4781450 NCBI chrNW_004955480:543,397...1,188,376
Ensembl chrNW_004955480:1,078,322...1,188,435
JBrowse link
G Ppm1a protein phosphatase, Mg2+/Mn2+ dependent 1A acts_upstream_of_or_within ISO (MGI:5289760|PMID:21829547) MGI PMID:21829547 MGI:5289760 NCBI chrNW_004955466:9,315,227...9,331,213 JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (MGI:5289760|PMID:21829547) MGI PMID:21829547 MGI:5289760 NCBI chrNW_004955461:14,337,914...14,622,779
Ensembl chrNW_004955461:14,337,914...14,556,931
JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 ISO RGD PMID:23845590 RGD:9835377 NCBI chrNW_004955500:6,655,056...6,674,311
Ensembl chrNW_004955500:6,655,056...6,674,311
JBrowse link
G Rock1 Rho associated coiled-coil containing protein kinase 1 involved_in ISO (PMID:26634652) BHF-UCL PMID:26634652 NCBI chrNW_004955402:9,752,101...9,864,317
Ensembl chrNW_004955402:9,750,730...9,864,317
JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:26634652) BHF-UCL PMID:26634652 NCBI chrNW_004955487:5,856,190...5,972,408
Ensembl chrNW_004955487:5,859,204...5,972,401
JBrowse link
G Scx scleraxis bHLH transcription factor acts_upstream_of_or_within ISO (PMID:18498113), (PMID:9328840) UniProt PMID:9328840 PMID:18498113 NCBI chrNW_004955454:2,886,981...2,888,829
Ensembl chrNW_004955454:2,886,981...2,888,829
JBrowse link
G Serpine1 serpin family E member 1 acts_upstream_of_or_within ISO (MGI:5289760|PMID:21829547) RGD
MGI
PMID:19247458 PMID:21829547 MGI:5289760 RGD:8547745 NCBI chrNW_004955456:16,147,523...16,157,040
Ensembl chrNW_004955456:16,145,944...16,157,142
JBrowse link
G Sfrp1 secreted frizzled related protein 1 involved_in ISO (PMID:16149051) UniProt PMID:16149051 NCBI chrNW_004955536:1,663,721...1,702,678
Ensembl chrNW_004955536:1,663,344...1,703,514
JBrowse link
G Smad3 SMAD family member 3 involved_in ISO (PMID:12902338) CAFA PMID:12902338 NCBI chrNW_004955450:8,747,651...8,842,003
Ensembl chrNW_004955450:8,747,651...8,842,136
JBrowse link
G Smad7 SMAD family member 7 involved_in ISO (PMID:18593713)
(MGI:5532916|PMID:18593713)
BHF-UCL PMID:18593713 MGI:5532916 NCBI chrNW_004955402:34,028,184...34,058,949
Ensembl chrNW_004955402:34,028,063...34,058,291
JBrowse link
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 ISO RGD PMID:10022522 RGD:10448942 NCBI chrNW_004955559:1,618,246...1,634,144
Ensembl chrNW_004955559:1,614,039...1,634,142
JBrowse link
G Sox5 SRY-box transcription factor 5 involved_in ISO (PMID:21401405) UniProt PMID:21401405 NCBI chrNW_004955413:18,831,931...19,676,371
Ensembl chrNW_004955413:18,831,931...19,204,217
JBrowse link
G Sox6 SRY-box transcription factor 6 involved_in ISO (PMID:21401405) UniProt PMID:21401405 NCBI chrNW_004955414:30,965,626...31,532,473
Ensembl chrNW_004955414:30,971,920...31,335,263
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
ISO (PMID:21401405)
(PMID:17525254)
UniProt PMID:17525254 PMID:21401405 NCBI chrNW_004955478:941,684...945,563
Ensembl chrNW_004955478:940,177...945,563
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:5289760|PMID:21829547) MGI PMID:21829547 MGI:5289760 NCBI chrNW_004955445:19,213,210...19,227,670
Ensembl chrNW_004955445:19,215,161...19,228,695
JBrowse link
G Star steroidogenic acute regulatory protein ISO FSH-stimulated granulosa cells RGD PMID:18511507 RGD:4781450 NCBI chrNW_004955463:13,760,089...13,765,245
Ensembl chrNW_004955463:13,760,089...13,765,244
JBrowse link
G Stk16 serine/threonine kinase 16 ISO RGD PMID:10947953 RGD:727297 NCBI chrNW_004955453:14,182,167...14,185,569
Ensembl chrNW_004955453:14,182,066...14,185,584
JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within
ISO (PMID:22269326)
(MGI:5532214|PMID:23861879)
(PMID:19736306), (PMID:22269326)
BHF-UCL
MGI
PMID:19736306 PMID:22269326 PMID:23861879 MGI:5532214 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 involved_in ISO (PMID:19494318)
(MGI:3848261|PMID:19494318)
BHF-UCL PMID:19494318 MGI:3848261 NCBI chrNW_004955419:26,490,899...26,546,349
Ensembl chrNW_004955419:26,490,899...26,547,017
JBrowse link
G Usp9x ubiquitin specific peptidase 9 X-linked acts_upstream_of_or_within ISO (MGI:5532214|PMID:23861879) MGI PMID:23861879 MGI:5532214 NCBI chrNW_004955565:1,479,040...1,602,070
Ensembl chrNW_004955565:1,479,040...1,602,070
JBrowse link
G Wnt10a Wnt family member 10A involved_in ISO (PMID:15040835) UniProt PMID:15040835 NCBI chrNW_004955453:14,528,373...14,540,801
Ensembl chrNW_004955453:14,528,153...14,540,818
JBrowse link
G Wnt2 Wnt family member 2 involved_in ISO (PMID:15040835) UniProt PMID:15040835 NCBI chrNW_004955432:22,988,208...23,024,530
Ensembl chrNW_004955432:22,984,170...23,027,705
JBrowse link
G Wnt4 Wnt family member 4 involved_in ISO (PMID:15040835) UniProt PMID:15040835 NCBI chrNW_004955452:2,319,446...2,344,740
Ensembl chrNW_004955452:2,319,446...2,344,989
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (PMID:15040835) UniProt PMID:15040835 NCBI chrNW_004955430:5,304,817...5,325,684
Ensembl chrNW_004955430:5,304,745...5,325,684
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:15040835) UniProt PMID:15040835 NCBI chrNW_004955429:12,647,993...12,693,998
Ensembl chrNW_004955429:12,647,993...12,694,895
JBrowse link
G Wwox WW domain containing oxidoreductase involved_in ISO (PMID:19366691)
(MGI:3851310|PMID:19366691)
BHF-UCL PMID:19366691 MGI:3851310 NCBI chrNW_004955522:1,265,732...2,185,372
Ensembl chrNW_004955522:1,265,404...2,184,562
JBrowse link
G Xcl1 X-C motif chemokine ligand 1 involved_in ISO (MGI:85739|PMID:9013979) BHF-UCL PMID:9013979 MGI:85739 NCBI chrNW_004955462:8,594,416...8,598,101 JBrowse link
G Yes1 YES proto-oncogene 1, Src family tyrosine kinase acts_upstream_of_or_within ISO (MGI:5289760|PMID:21829547) MGI PMID:21829547 MGI:5289760 NCBI chrNW_004955402:9,199,704...9,255,183
Ensembl chrNW_004955402:9,226,295...9,256,044
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 ISO RGD PMID:16824956 RGD:2325877 NCBI chrNW_004955429:23,011,627...23,198,188
Ensembl chrNW_004955429:23,010,790...23,198,250
JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 involved_in ISO (PMID:20166898) UniProt PMID:20166898 NCBI chrNW_004955466:1,541,367...1,546,617
Ensembl chrNW_004955466:1,541,323...1,546,617
JBrowse link
G Zfp36l2 ZFP36 ring finger protein like 2 involved_in ISO (PMID:20166898) UniProt PMID:20166898 NCBI chrNW_004955441:10,467,608...10,469,885 JBrowse link
negative regulation of cellular response to transforming growth factor beta stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cflar CASP8 and FADD like apoptosis regulator ISO RGD PMID:18314484 RGD:11341711 NCBI chrNW_004955403:415,092...442,214
Ensembl chrNW_004955403:412,632...434,741
JBrowse link
G Dlx1 distal-less homeobox 1 involved_in ISO (PMID:14671321) UniProt PMID:14671321 NCBI chrNW_004955449:2,920,705...2,924,667
Ensembl chrNW_004955449:2,920,478...2,924,667
JBrowse link
G Il4 interleukin 4 involved_in ISO (PMID:11967989) UniProt PMID:11967989 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (PMID:28467929) ARUK-UCL PMID:28467929 NCBI chrNW_004955429:14,814,690...14,936,869
Ensembl chrNW_004955429:14,873,908...14,937,387
JBrowse link
negative regulation of transforming growth factor beta receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam17 ADAM metallopeptidase domain 17 involved_in ISO (PMID:21170088) UniProt PMID:21170088 NCBI chrNW_004955487:5,180,241...5,218,298
Ensembl chrNW_004955487:5,180,252...5,218,216
JBrowse link
G Adamtsl2 ADAMTS like 2 involved_in
acts_upstream_of_or_within
ISO (PMID:18677313)
(MGI:5638958|PMID:25762570)
BHF-UCL
MGI
PMID:18677313 PMID:25762570 MGI:5638958 NCBI chrNW_004955513:2,849,310...2,879,130
Ensembl chrNW_004955513:2,849,271...2,879,848
JBrowse link
G Aspn asporin involved_in ISO (PMID:17827158)
(MGI:3762064|PMID:17827158)
UniProt PMID:17827158 MGI:3762064 NCBI chrNW_004955515:5,322,074...5,345,715
Ensembl chrNW_004955515:5,321,943...5,345,894
JBrowse link
G Bambi BMP and activin membrane bound inhibitor involved_in ISO (PMID:14660579)
(PMID:19328798)
BHF-UCL PMID:14660579 PMID:19328798 NCBI chrNW_004955429:21,024,396...21,025,890
Ensembl chrNW_004955429:21,024,374...21,025,890
JBrowse link
G Bcl9l BCL9 like involved_in ISO (PMID:19328798) BHF-UCL PMID:19328798 NCBI chrNW_004955412:20,029,988...20,059,057
Ensembl chrNW_004955412:20,029,988...20,059,057
JBrowse link
G Bmp2 bone morphogenetic protein 2 acts_upstream_of_or_within ISO (PMID:28467929) ARUK-UCL PMID:28467929 NCBI chrNW_004955415:17,048,374...17,058,172
Ensembl chrNW_004955415:17,048,030...17,060,181
JBrowse link
G Cav1 caveolin 1 involved_in ISO (PMID:25893292) UniProt PMID:25893292 NCBI chrNW_004955432:22,258,262...22,292,403
Ensembl chrNW_004955432:22,258,250...22,292,403
JBrowse link
G Cav2 caveolin 2 acts_upstream_of_or_within ISO (MGI:5298182|PMID:21832243) MGI PMID:21832243 MGI:5298182 NCBI chrNW_004955432:22,240,041...22,242,200 JBrowse link
G Cd109 CD109 molecule involved_in ISO (PMID:16754747) UniProt PMID:16754747 NCBI chrNW_004955488:9,281,407...9,378,354
Ensembl chrNW_004955488:9,281,661...9,378,490
JBrowse link
G Chst11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within ISO (MGI:3767479|PMID:16079159) MGI PMID:16079159 MGI:3767479 NCBI chrNW_004955405:38,985,046...39,134,130
Ensembl chrNW_004955405:38,985,046...39,139,021
JBrowse link
G Cidea cell death inducing DFFA like effector a involved_in ISO (MGI:3768618|PMID:17080483) BHF-UCL PMID:17080483 MGI:3768618 NCBI chrNW_004955402:1,090,372...1,096,621
Ensembl chrNW_004955402:1,090,518...1,096,569
JBrowse link
G Dand5 DAN domain BMP antagonist family member 5 acts_upstream_of_or_within ISO (MGI:3055566|PMID:14721776) MGI PMID:14721776 MGI:3055566 NCBI chrNW_004955415:32,012,637...32,015,965
Ensembl chrNW_004955415:32,012,637...32,015,965
JBrowse link
G Dnm2 dynamin 2 ISO RGD PMID:25100282 RGD:9685289 NCBI chrNW_004955495:1,860,644...1,934,589
Ensembl chrNW_004955495:1,860,644...1,934,818
JBrowse link
G Eid2 EP300 interacting inhibitor of differentiation 2 involved_in ISO (PMID:14612439) HGNC-UCL PMID:14612439 NCBI chrNW_004955468:29,927...32,947
Ensembl chrNW_004955468:30,076...31,387
JBrowse link
G Emilin1 elastin microfibril interfacer 1 involved_in ISO (MGI:5605894|PMID:25056700) BHF-UCL PMID:25056700 MGI:5605894 NCBI chrNW_004955469:9,049,666...9,057,692
Ensembl chrNW_004955469:9,049,662...9,057,684
JBrowse link
G Fam89b family with sequence similarity 89 member B involved_in ISO (MGI:5486566|PMID:12646588) UniProt PMID:12646588 MGI:5486566 NCBI chrNW_004955422:19,690,806...19,693,575
Ensembl chrNW_004955422:19,691,352...19,692,377
JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A involved_in ISO (PMID:11583628) FlyBase PMID:11583628 NCBI chrNW_004955596:580,106...606,210
Ensembl chrNW_004955596:580,106...603,255
JBrowse link
G Glg1 golgi glycoprotein 1 acts_upstream_of_or_within ISO (MGI:4829577|PMID:20530870) MGI PMID:20530870 MGI:4829577 NCBI chrNW_004955484:2,871,390...2,987,913
Ensembl chrNW_004955484:2,870,872...2,983,467
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 acts_upstream_of_or_within ISO (MGI:3771280|PMID:17991893) MGI PMID:17991893 MGI:3771280 NCBI chrNW_004955419:3,055,420...3,060,208
Ensembl chrNW_004955419:3,055,420...3,062,131
JBrowse link
G Htra1 HtrA serine peptidase 1 acts_upstream_of_or_within ISO (MGI:3034116|PMID:14973287) MGI PMID:14973287 MGI:3034116 NCBI chrNW_004955477:761,127...808,396
Ensembl chrNW_004955477:761,127...808,994
JBrowse link
G Htra3 HtrA serine peptidase 3 involved_in ISO (MGI:3046453|PMID:15206957) UniProt PMID:15206957 MGI:3046453 NCBI chrNW_004955514:2,716,448...2,740,590
Ensembl chrNW_004955514:2,717,290...2,737,288
JBrowse link
G Il17rd interleukin 17 receptor D involved_in ISO (MGI:6414689|PMID:25576668) UniProt PMID:25576668 MGI:6414689 NCBI chrNW_004955430:6,842,756...6,873,195
Ensembl chrNW_004955430:6,848,820...6,898,704
JBrowse link
G Ldlrad4 low density lipoprotein receptor class A domain containing 4 involved_in ISO (PMID:24627487)
(MGI:5583005|PMID:24627487)
UniProt PMID:24627487 MGI:5583005 NCBI chrNW_004955402:384,177...508,876 JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO (MGI:6434720|PMID:31023188) BHF-UCL PMID:31023188 MGI:6434720 NCBI chrNW_004955458:4,861,431...4,941,939
Ensembl chrNW_004955458:4,861,431...4,941,146
JBrowse link
G Mecom MDS1 and EVI1 complex locus NOT|involved_in ISO (PMID:15897867) UniProt PMID:15897867 NCBI chrNW_004955448:18,259,847...18,542,085
Ensembl chrNW_004955448:18,259,083...18,439,646
JBrowse link
G Nkx2-1 NK2 homeobox 1 involved_in ISO (PMID:19293183) UniProt PMID:19293183 NCBI chrNW_004955409:24,612,490...24,616,360
Ensembl chrNW_004955409:24,612,635...24,616,430
JBrowse link
G Onecut1 one cut homeobox 1 acts_upstream_of_or_within ISO (MGI:3588024|PMID:16103213) MGI PMID:16103213 MGI:3588024 NCBI chrNW_004955409:2,181,364...2,214,636
Ensembl chrNW_004955409:2,181,346...2,207,888
JBrowse link
G Onecut2 one cut homeobox 2 acts_upstream_of_or_within ISO (MGI:3588024|PMID:16103213) MGI PMID:16103213 MGI:3588024 NCBI chrNW_004955402:41,782,281...41,839,782
Ensembl chrNW_004955402:41,782,281...41,839,782
JBrowse link
G Pbld phenazine biosynthesis like protein domain containing involved_in ISO (PMID:23687415) UniProt PMID:23687415 NCBI chrNW_004955425:20,564,296...20,620,988
Ensembl chrNW_004955425:20,584,644...20,620,988
JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase 1 involved_in ISO (PMID:17327236) UniProt PMID:17327236 NCBI chrNW_004955442:14,685,089...14,772,870
Ensembl chrNW_004955442:14,685,153...14,772,870
JBrowse link
G Peg10 paternally expressed 10 involved_in ISO (PMID:15611116) HGNC-UCL PMID:15611116 NCBI chrNW_004955432:11,383,919...11,395,313
Ensembl chrNW_004955432:11,390,847...11,391,929
JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 involved_in ISO (PMID:19122240) BHF-UCL PMID:19122240 NCBI chrNW_004955495:1,250,557...1,261,617
Ensembl chrNW_004955495:1,250,453...1,266,235
JBrowse link
G Pmepa1 prostate transmembrane protein, androgen induced 1 involved_in ISO (PMID:20129061)
(MGI:5582164|PMID:20129061)
(PMID:24627487)
UniProt PMID:20129061 PMID:24627487 MGI:5582164 NCBI chrNW_004955445:1,837,084...1,847,214
Ensembl chrNW_004955445:1,837,062...1,847,214
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of_or_within ISO (PMID:31611175) ARUK-UCL PMID:31611175 NCBI chrNW_004955413:30,306,563...30,366,245
Ensembl chrNW_004955413:30,307,219...30,359,500
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in
acts_upstream_of_or_within
ISO (PMID:31023188)
(PMID:28467929)
BHF-UCL
ARUK-UCL
PMID:28467929 PMID:31023188 NCBI chrNW_004955429:14,814,690...14,936,869
Ensembl chrNW_004955429:14,873,908...14,937,387
JBrowse link
G Ppm1a protein phosphatase, Mg2+/Mn2+ dependent 1A involved_in ISO (PMID:16751101) UniProt PMID:16751101 NCBI chrNW_004955466:9,315,227...9,331,213 JBrowse link
G Prdm16 PR/SET domain 16 NOT|involved_in
acts_upstream_of_or_within
ISO (PMID:14656887)
(MGI:4430027|PMID:20007998)
(PMID:19049980)
UniProt
MGI
PMID:14656887 PMID:19049980 PMID:20007998 MGI:4430027 NCBI chrNW_004955486:8,139,848...8,327,788
Ensembl chrNW_004955486:8,137,531...8,327,977
JBrowse link
G Rasl11b RAS like family 11 member B acts_upstream_of_or_within ISO (MGI:3505646|PMID:15239668) MGI PMID:15239668 MGI:3505646 NCBI chrNW_004955447:17,755,277...17,758,827
Ensembl chrNW_004955447:17,755,277...17,758,830
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (MGI:5306300|PMID:17098745) UniProt PMID:17098745 MGI:5306300 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
JBrowse link
G Ski SKI proto-oncogene involved_in
acts_upstream_of_or_within
ISO (PMID:17469184)
(PMID:15312649)
(MGI:5300220|PMID:21937600)
(PMID:17054724), (PMID:19049980)
UniProt
MGI
PMID:15312649 PMID:17054724 PMID:17469184 PMID:19049980 PMID:21937600 MGI:5300220 NCBI chrNW_004955486:8,857,693...8,921,821
Ensembl chrNW_004955486:8,857,693...8,921,821
JBrowse link
G Skil SKI like proto-oncogene involved_in
acts_upstream_of_or_within
ISO (PMID:17469184), (PMID:19383336)
(MGI:3530729|PMID:15677329)
UniProt
MGI
PMID:15677329 PMID:17469184 PMID:19383336 MGI:3530729 NCBI chrNW_004955420:530,531...554,308
Ensembl chrNW_004955420:530,528...554,551
JBrowse link
G Skor2 SKI family transcriptional corepressor 2 involved_in
NOT|acts_upstream_of_or_within
ISO (PMID:16200078)
(MGI:5300220|PMID:21937600)
UniProt
MGI
PMID:16200078 PMID:21937600 MGI:5300220 NCBI chrNW_004955402:32,577,189...32,618,611
Ensembl chrNW_004955402:32,582,575...32,618,436
JBrowse link
G Slc2a10 solute carrier family 2 member 10 acts_upstream_of_or_within ISO (PMID:16550171), (PMID:26376865) ARUK-UCL PMID:16550171 PMID:26376865 NCBI chrNW_004955445:10,708,147...10,722,109
Ensembl chrNW_004955445:10,709,681...10,722,264
JBrowse link
G Smad6 SMAD family member 6 involved_in ISO (PMID:19047146)
(PMID:9256479)
BHF-UCL PMID:9256479 PMID:19047146 NCBI chrNW_004955450:9,005,332...9,070,790 JBrowse link
G Smad7 SMAD family member 7 involved_in ISO (PMID:12151385), (PMID:17438144), (PMID:18762808), (PMID:9256479) BHF-UCL PMID:9256479 PMID:12151385 PMID:17438144 PMID:18762808 NCBI chrNW_004955402:34,028,184...34,058,949
Ensembl chrNW_004955402:34,028,063...34,058,291
JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 involved_in ISO (PMID:11278251), (PMID:12151385) BHF-UCL PMID:11278251 PMID:12151385 NCBI chrNW_004955460:14,774,545...14,860,783
Ensembl chrNW_004955460:14,774,545...14,802,879
JBrowse link
G Smurf2 SMAD specific E3 ubiquitin protein ligase 2 involved_in ISO (PMID:19255252) CACAO PMID:19255252 NCBI chrNW_004955478:7,205,266...7,336,390
Ensembl chrNW_004955478:7,270,055...7,336,390
JBrowse link
G Snx1 sorting nexin 1 acts_upstream_of_or_within ISO (MGI:3505646|PMID:15239668) MGI PMID:15239668 MGI:3505646 NCBI chrNW_004955450:11,266,712...11,306,014
Ensembl chrNW_004955450:11,266,712...11,305,930
JBrowse link
G Snx25 sorting nexin 25 involved_in ISO (PMID:21266196)
(MGI:5545984|PMID:21266196)
UniProt PMID:21266196 MGI:5545984 NCBI chrNW_004955403:23,678,301...23,787,256
Ensembl chrNW_004955403:23,676,002...23,787,308
JBrowse link
G Snx6 sorting nexin 6 involved_in ISO (PMID:11279102) HGNC-UCL PMID:11279102 NCBI chrNW_004955409:26,323,940...26,353,675
Ensembl chrNW_004955409:26,319,951...26,352,994
JBrowse link
G Spred1 sprouty related EVH1 domain containing 1 involved_in ISO (MGI:6414689|PMID:25576668) UniProt PMID:25576668 MGI:6414689 NCBI chrNW_004955416:5,288,779...5,376,861
Ensembl chrNW_004955416:5,288,262...5,377,036
JBrowse link
G Spred2 sprouty related EVH1 domain containing 2 involved_in ISO (MGI:6414689|PMID:25576668) UniProt PMID:25576668 MGI:6414689 NCBI chrNW_004955424:19,133,568...19,250,118
Ensembl chrNW_004955424:19,133,568...19,250,118
JBrowse link
G Spred3 sprouty related EVH1 domain containing 3 involved_in ISO (MGI:6414689|PMID:25576668) UniProt PMID:25576668 MGI:6414689 NCBI chrNW_004955468:1,030,964...1,039,495
Ensembl chrNW_004955468:1,028,470...1,039,495
JBrowse link
G Spry1 sprouty RTK signaling antagonist 1 involved_in ISO (MGI:6414689|PMID:25576668) UniProt PMID:25576668 MGI:6414689 NCBI chrNW_004955428:17,451,703...17,455,695
Ensembl chrNW_004955428:17,451,703...17,455,695
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 involved_in ISO (MGI:6414689|PMID:25576668) UniProt PMID:25576668 MGI:6414689 NCBI chrNW_004955404:27,349,286...27,353,706
Ensembl chrNW_004955404:27,349,519...27,353,706
JBrowse link
G Strap serine/threonine kinase receptor associated protein involved_in
acts_upstream_of_or_within
ISO (PMID:23687415)
(MGI:1321347|PMID:9856985)
UniProt
MGI
PMID:9856985 PMID:23687415 MGI:1321347 NCBI chrNW_004955413:12,533,422...12,558,138
Ensembl chrNW_004955413:12,533,423...12,559,288
JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in ISO (PMID:24613385) UniProt PMID:24613385 NCBI chrNW_004955442:16,521,130...16,523,733
Ensembl chrNW_004955442:16,521,130...16,523,468
JBrowse link
G Tdgf1 teratocarcinoma-derived growth factor 1 acts_upstream_of_or_within ISO (MGI:3771280|PMID:17991893) MGI PMID:17991893 MGI:3771280 NCBI chrNW_004955420:25,476,975...25,479,969
Ensembl chrNW_004955420:25,477,122...25,479,969
JBrowse link
G Tgfb1i1 transforming growth factor beta 1 induced transcript 1 involved_in ISO (PMID:18762808) BHF-UCL PMID:18762808 NCBI chrNW_004955493:8,309,480...8,315,378
Ensembl chrNW_004955493:8,309,505...8,315,668
JBrowse link
G Tgfb3 transforming growth factor beta 3 ISO RGD PMID:12071374 RGD:730235 NCBI chrNW_004955438:33,129...55,180
Ensembl chrNW_004955438:29,415...55,180
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 ISO RGD PMID:10746731 RGD:1579946 NCBI chrNW_004955423:2,573,851...2,765,353
Ensembl chrNW_004955423:2,573,795...2,765,772
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:3528807|PMID:15657445) MGI PMID:15657445 MGI:3528807 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
G Vasn vasorin involved_in ISO (PMID:15247411)
(PMID:21170088)
UniProt PMID:15247411 PMID:21170088 NCBI chrNW_004955442:13,060,923...13,071,303
Ensembl chrNW_004955442:13,060,923...13,071,303
JBrowse link
G Veph1 ventricular zone expressed PH domain containing 1 involved_in ISO (PMID:26039994) UniProt PMID:26039994 NCBI chrNW_004955448:8,207,272...8,423,712
Ensembl chrNW_004955448:8,207,272...8,423,861
JBrowse link
G Wfikkn1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 involved_in ISO (PMID:21054789) UniProt PMID:21054789 NCBI chrNW_004955442:16,573,094...16,577,650
Ensembl chrNW_004955442:16,569,046...16,577,650
JBrowse link
G Wfikkn2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 involved_in ISO (PMID:21054789) UniProt PMID:21054789 NCBI chrNW_004955451:10,976,748...10,982,482
Ensembl chrNW_004955451:10,976,700...10,982,616
JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO (MGI:3628833|PMID:16601693) MGI PMID:16601693 MGI:3628833 NCBI chrNW_004955500:7,797,063...7,811,142
Ensembl chrNW_004955500:7,797,060...7,811,167
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (PMID:26315405) BHF-UCL PMID:26315405 NCBI chrNW_004955455:3,037,885...3,041,827 JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7A involved_in ISO (PMID:25514493) UniProt PMID:25514493 NCBI chrNW_004955495:4,747,905...4,754,066
Ensembl chrNW_004955495:4,740,901...4,753,992
JBrowse link
G Znf451 zinc finger protein 451 involved_in ISO (PMID:24324267) UniProt PMID:24324267 NCBI chrNW_004955502:3,003,822...3,087,529
Ensembl chrNW_004955502:2,999,976...3,048,464
JBrowse link
positive regulation of transforming growth factor beta receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam17 ADAM metallopeptidase domain 17 involved_in ISO (MGI:3829110|PMID:18625725) BHF-UCL PMID:18625725 MGI:3829110 NCBI chrNW_004955487:5,180,241...5,218,298
Ensembl chrNW_004955487:5,180,252...5,218,216
JBrowse link
G Axin1 axin 1 acts_upstream_of_or_within ISO (MGI:3628833|PMID:16601693) MGI PMID:16601693 MGI:3628833 NCBI chrNW_004955442:16,845,728...16,898,301
Ensembl chrNW_004955442:16,843,152...16,898,430
JBrowse link
G Cdkn1c cyclin dependent kinase inhibitor 1C involved_in ISO (PMID:16943770) BHF-UCL PMID:16943770 NCBI chrNW_004955422:14,576,971...14,578,868 JBrowse link
G Cdkn2b cyclin dependent kinase inhibitor 2B involved_in ISO (PMID:16943770) BHF-UCL PMID:16943770 NCBI chrNW_004955472:12,275,613...12,280,141
Ensembl chrNW_004955472:12,275,544...12,280,528
JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in ISO (MGI:3690196|PMID:16619037) UniProt PMID:16619037 MGI:3690196 NCBI chrNW_004955436:20,370,950...20,372,677
Ensembl chrNW_004955436:20,370,950...20,372,677
JBrowse link
G Crebbp CREB binding protein involved_in ISO (PMID:25514493) UniProt PMID:25514493 NCBI chrNW_004955442:13,559,496...13,691,913
Ensembl chrNW_004955442:13,559,496...13,692,004
JBrowse link
G CUNH20orf27 chromosome unknown C20orf27 homolog involved_in ISO (PMID:32024300) FlyBase PMID:32024300 NCBI chrNW_004955415:14,596,522...14,610,181
Ensembl chrNW_004955415:14,596,522...14,610,181
JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:25514493) UniProt PMID:25514493 NCBI chrNW_004955413:26,647,553...26,727,875
Ensembl chrNW_004955413:26,648,339...26,727,933
JBrowse link
G Fermt1 FERM domain containing kindlin 1 involved_in ISO (MGI:5571208|PMID:24681597) CAFA PMID:24681597 MGI:5571208 NCBI chrNW_004955415:16,447,921...16,483,221
Ensembl chrNW_004955415:16,446,934...16,483,369
JBrowse link
G Flcn folliculin involved_in
acts_upstream_of_or_within
ISO (PMID:20573232)
(MGI:5050037|PMID:21258407)
UniProt
MGI
PMID:20573232 PMID:21258407 MGI:5050037 NCBI chrNW_004955577:672,774...694,140
Ensembl chrNW_004955577:672,410...694,140
JBrowse link
G Furin furin, paired basic amino acid cleaving enzyme ISO RGD PMID:15194465 RGD:1582619 NCBI chrNW_004955416:14,915,031...14,947,634
Ensembl chrNW_004955416:14,936,546...14,949,252
JBrowse link
G Gipc1 GIPC PDZ domain containing family member 1 involved_in ISO (MGI:3807767|PMID:11546783) BHF-UCL PMID:11546783 MGI:3807767 NCBI chrNW_004955415:33,067,689...33,077,749
Ensembl chrNW_004955415:33,067,689...33,074,730
JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 ISO RGD PMID:26880260 RGD:13504840 NCBI chrNW_004955507:5,346,937...5,370,072
Ensembl chrNW_004955507:5,346,838...5,370,072
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in ISO (PMID:14678985) UniProt PMID:14678985 NCBI chrNW_004955494:3,365,826...3,554,735
Ensembl chrNW_004955494:3,393,049...3,554,844
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in ISO (PMID:24613385) UniProt PMID:24613385 NCBI chrNW_004955437:9,872,649...9,878,459
Ensembl chrNW_004955437:9,873,908...9,878,459
JBrowse link
G Ing2 inhibitor of growth family member 2 involved_in ISO (PMID:18334480) UniProt PMID:18334480 NCBI chrNW_004955403:25,325,600...25,331,175
Ensembl chrNW_004955403:25,325,600...25,331,175
JBrowse link
G Itga8 integrin subunit alpha 8 acts_upstream_of_or_within ISO (MGI:3714574|PMID:17537792) MGI PMID:17537792 MGI:3714574 NCBI chrNW_004955429:11,932,764...12,120,757
Ensembl chrNW_004955429:11,932,570...12,120,821
JBrowse link
G Lrg1 leucine rich alpha-2-glycoprotein 1 acts_upstream_of_or_within ISO (MGI:5543310|PMID:23868260) MGI PMID:23868260 MGI:5543310 NCBI chrNW_004955495:4,402,670...4,405,666
Ensembl chrNW_004955495:4,402,746...4,406,943
JBrowse link
G Men1 menin 1 involved_in ISO (PMID:11274402) UniProt PMID:11274402 NCBI chrNW_004955422:20,356,491...20,363,374
Ensembl chrNW_004955422:20,356,491...20,363,575
JBrowse link
G Myocd myocardin involved_in ISO (MGI:3696631|PMID:16224064) BHF-UCL PMID:16224064 MGI:3696631 NCBI chrNW_004955467:4,653,065...4,743,438
Ensembl chrNW_004955467:4,656,380...4,743,110
JBrowse link
G Npnt nephronectin acts_upstream_of_or_within ISO (MGI:3714574|PMID:17537792) MGI PMID:17537792 MGI:3714574 NCBI chrNW_004955496:3,321,310...3,388,625
Ensembl chrNW_004955496:3,320,946...3,388,694
JBrowse link
G Rnf111 ring finger protein 111 acts_upstream_of_or_within ISO (MGI:3628833|PMID:16601693) MGI PMID:16601693 MGI:3628833 NCBI chrNW_004955450:15,590,053...15,651,344
Ensembl chrNW_004955450:15,587,270...15,624,576
JBrowse link
G Sdcbp syndecan binding protein involved_in ISO (PMID:25893292) UniProt PMID:25893292 NCBI chrNW_004955454:17,093,930...17,113,491
Ensembl chrNW_004955454:17,089,232...17,113,484
JBrowse link
G Slc2a10 solute carrier family 2 member 10 acts_upstream_of_or_within ISO (PMID:26376865) ARUK-UCL PMID:26376865 NCBI chrNW_004955445:10,708,147...10,722,109
Ensembl chrNW_004955445:10,709,681...10,722,264
JBrowse link
G Smad4 SMAD family member 4 involved_in ISO (PMID:19328798) BHF-UCL PMID:19328798 NCBI chrNW_004955402:35,956,080...36,001,746
Ensembl chrNW_004955402:35,961,165...35,994,538
JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:11278756) UniProt PMID:11278756 NCBI chrNW_004955438:1,561,562...1,601,492
Ensembl chrNW_004955438:1,561,568...1,601,492
JBrowse link
G Stk11 serine/threonine kinase 11 involved_in ISO (PMID:18311138)
(MGI:3788958|PMID:18311138)
BHF-UCL PMID:18311138 MGI:3788958 NCBI chrNW_004955495:6,678,195...6,699,408
Ensembl chrNW_004955495:6,678,195...6,699,058
JBrowse link
G Tgfb1i1 transforming growth factor beta 1 induced transcript 1 involved_in ISO (PMID:18762808) BHF-UCL PMID:18762808 NCBI chrNW_004955493:8,309,480...8,315,378
Ensembl chrNW_004955493:8,309,505...8,315,668
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 acts_upstream_of_or_within ISO (MGI:5617089|PMID:25382630) RGD
MGI
PMID:8106553 PMID:25382630 MGI:5617089 RGD:1579949 NCBI chrNW_004955423:2,573,851...2,765,353
Ensembl chrNW_004955423:2,573,795...2,765,772
JBrowse link
G Thbs1 thrombospondin 1 involved_in ISO (PMID:18555217)
(MGI:1270011|PMID:9657149)
BHF-UCL PMID:9657149 PMID:18555217 MGI:1270011 NCBI chrNW_004955416:6,490,034...6,506,419
Ensembl chrNW_004955416:6,489,451...6,506,419
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 involved_in ISO (PMID:30592286) DIBU PMID:30592286 NCBI chrNW_004955440:10,755,658...10,881,044
Ensembl chrNW_004955440:10,756,014...10,795,491
JBrowse link
regulation of transforming growth factor beta receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl9 BCL9 transcription coactivator NOT|involved_in ISO (PMID:19328798) BHF-UCL PMID:19328798 NCBI chrNW_004955568:785,361...866,986
Ensembl chrNW_004955568:783,692...811,600
JBrowse link
G Cav3 caveolin 3 acts_upstream_of_or_within ISO (MGI:4946902|PMID:21182936) MGI PMID:21182936 MGI:4946902 NCBI chrNW_004955561:326,008...335,911
Ensembl chrNW_004955561:325,944...335,914
JBrowse link
G Dand5 DAN domain BMP antagonist family member 5 acts_upstream_of_or_within ISO (MGI:1335654|PMID:10208746) MGI PMID:10208746 MGI:1335654 NCBI chrNW_004955415:32,012,637...32,015,965
Ensembl chrNW_004955415:32,012,637...32,015,965
JBrowse link
G Eid2 EP300 interacting inhibitor of differentiation 2 involved_in ISO (PMID:14612439) HGNC-UCL PMID:14612439 NCBI chrNW_004955468:29,927...32,947
Ensembl chrNW_004955468:30,076...31,387
JBrowse link
G Eng endoglin involved_in ISO (PMID:15702480) RGD
HGNC-UCL
PMID:15702480 PMID:17376778 RGD:2313627 NCBI chrNW_004955419:818,797...853,319
Ensembl chrNW_004955419:818,932...852,694
JBrowse link
G Folr1 folate receptor alpha involved_in ISO (MGI:5644149|PMID:21649587) BHF-UCL PMID:21649587 MGI:5644149 NCBI chrNW_004955414:19,188,830...19,197,728
Ensembl chrNW_004955414:19,187,388...19,197,728
JBrowse link
G Gdf2 growth differentiation factor 2 NOT|involved_in ISO (MGI:4830635|PMID:20406889) DFLAT PMID:20406889 MGI:4830635 NCBI chrNW_004955556:2,204,841...2,210,335
Ensembl chrNW_004955556:2,205,071...2,209,055
JBrowse link
G Il17f interleukin 17F involved_in ISO (PMID:11591732) UniProt PMID:11591732 NCBI chrNW_004955411:5,852,767...5,859,208
Ensembl chrNW_004955411:5,852,767...5,859,208
JBrowse link
G Itga3 integrin subunit alpha 3 involved_in ISO (PMID:24621570) UniProt PMID:24621570 NCBI chrNW_004955451:11,563,120...11,590,119
Ensembl chrNW_004955451:11,561,704...11,589,727
JBrowse link
G Lats1 large tumor suppressor kinase 1 involved_in ISO (MGI:4939579|PMID:21145499) UniProt PMID:21145499 MGI:4939579 NCBI chrNW_004955439:11,559,655...11,611,287
Ensembl chrNW_004955439:11,559,657...11,611,660
JBrowse link
G Lats2 large tumor suppressor kinase 2 involved_in ISO (MGI:4939579|PMID:21145499) UniProt PMID:21145499 MGI:4939579 NCBI chrNW_004955497:1,711,882...1,768,177
Ensembl chrNW_004955497:1,711,205...1,761,584
JBrowse link
G Lox lysyl oxidase acts_upstream_of_or_within ISO (MGI:5634219|PMID:25715398) MGI PMID:25715398 MGI:5634219 NCBI chrNW_004955521:178,290...193,926
Ensembl chrNW_004955521:185,792...193,926
JBrowse link
G Nrep neuronal regeneration related protein acts_upstream_of_or_within ISO (MGI:3034115|PMID:14985127) MGI PMID:14985127 MGI:3034115 NCBI chrNW_004955418:3,435,784...3,464,667
Ensembl chrNW_004955418:3,436,731...3,464,667
JBrowse link
G Pals1 protein associated with LIN7 1, MAGUK p55 family member involved_in ISO (MGI:4939579|PMID:21145499) UniProt PMID:21145499 MGI:4939579 NCBI chrNW_004955466:2,871,445...2,937,296
Ensembl chrNW_004955466:2,874,058...2,918,122
JBrowse link
G Smad2 SMAD family member 2 involved_in ISO (PMID:14555988) BHF-UCL PMID:14555988 NCBI chrNW_004955402:33,131,760...33,217,144
Ensembl chrNW_004955402:33,136,778...33,216,844
JBrowse link
G Smad3 SMAD family member 3 involved_in
acts_upstream_of_or_within
ISO (PMID:8774881)
(MGI:2153314|PMID:11711431)
BHF-UCL
MGI
PMID:8774881 PMID:11711431 MGI:2153314 NCBI chrNW_004955450:8,747,651...8,842,003
Ensembl chrNW_004955450:8,747,651...8,842,136
JBrowse link
G Smad4 SMAD family member 4 involved_in ISO (PMID:8774881) BHF-UCL PMID:8774881 NCBI chrNW_004955402:35,956,080...36,001,746
Ensembl chrNW_004955402:35,961,165...35,994,538
JBrowse link
G Smad7 SMAD family member 7 ISO RGD PMID:11959632 RGD:625758 NCBI chrNW_004955402:34,028,184...34,058,949
Ensembl chrNW_004955402:34,028,063...34,058,291
JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISO (PMID:20624318) UniProt PMID:20624318 NCBI chrNW_004955487:2,678,961...2,680,869
Ensembl chrNW_004955487:2,679,145...2,680,521
JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISO (PMID:15334054) BHF-UCL PMID:15334054 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
JBrowse link
G Trim33 tripartite motif containing 33 involved_in ISO (PMID:19135894) UniProt PMID:19135894 NCBI chrNW_004955435:17,631,596...17,750,261
Ensembl chrNW_004955435:17,631,602...17,750,261
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 acts_upstream_of_or_within ISO (MGI:3641341|PMID:16824956) MGI PMID:16824956 MGI:3641341 NCBI chrNW_004955429:23,011,627...23,198,188
Ensembl chrNW_004955429:23,010,790...23,198,250
JBrowse link
G Znf703 zinc finger protein 703 involved_in ISO (PMID:21337521)
(MGI:4940410|PMID:21317240)
UniProt PMID:21317240 PMID:21337521 MGI:4940410 NCBI chrNW_004955463:13,407,491...13,411,562
Ensembl chrNW_004955463:13,407,491...13,411,562
JBrowse link
sequestering of TGFbeta in extracellular matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbn1 fibrillin 1 involved_in ISO (MGI:4836762|PMID:20855508) BHF-UCL PMID:20855508 MGI:4836762 NCBI chrNW_004955409:5,281,603...5,502,547
Ensembl chrNW_004955409:5,281,603...5,504,761
JBrowse link
G Fbn2 fibrillin 2 involved_in ISO (MGI:4836762|PMID:20855508) BHF-UCL PMID:20855508 MGI:4836762 NCBI chrNW_004955415:1,307,553...1,535,435
Ensembl chrNW_004955415:1,309,077...1,537,052
JBrowse link
G Ltbp1 latent transforming growth factor beta binding protein 1 involved_in ISO (PMID:2022183), (PMID:8617200) UniProt PMID:2022183 PMID:8617200 NCBI chrNW_004955441:1,405,340...1,626,668
Ensembl chrNW_004955441:1,232,041...1,627,470
JBrowse link
G Nrros negative regulator of reactive oxygen species involved_in ISO (MGI:6192878|PMID:29909984) UniProt PMID:29909984 MGI:6192878 NCBI chrNW_004955420:12,792,173...12,798,645
Ensembl chrNW_004955420:12,792,111...12,801,963
JBrowse link
transforming growth factor beta receptor complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1c activin A receptor type 1C ISO TbetaR-II, ActR-II (Chlorocebus aethiops), ligand-dependent RGD PMID:8940033 RGD:631880 NCBI chrNW_004955449:15,814,230...15,864,747
Ensembl chrNW_004955449:15,813,856...15,858,537
JBrowse link
G Eid2 EP300 interacting inhibitor of differentiation 2 involved_in ISO (PMID:14612439) HGNC-UCL PMID:14612439 NCBI chrNW_004955468:29,927...32,947
Ensembl chrNW_004955468:30,076...31,387
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 ISO RGD PMID:8106553 RGD:1579949 NCBI chrNW_004955423:2,573,851...2,765,353
Ensembl chrNW_004955423:2,573,795...2,765,772
JBrowse link
transforming growth factor beta receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in
acts_upstream_of_or_within
ISO (PMID:8242742)
(MGI:1935017|PMID:11376112)
PMID:12968668
UniProt
MGI
PMID:8242742 PMID:11376112 PMID:12968668 MGI:1935017 RGD:8554636 NCBI chrNW_004955449:15,587,958...15,706,432
Ensembl chrNW_004955449:15,640,230...15,708,694
JBrowse link
G Acvrl1 activin A receptor like type 1 involved_in
acts_upstream_of_or_within
ISO (PMID:15702480)
(MGI:2679137|PMID:14580334)
HGNC-UCL
MGI
PMID:14580334 PMID:15702480 MGI:2679137 NCBI chrNW_004955547:2,278,548...2,293,865
Ensembl chrNW_004955547:2,279,042...2,294,443
JBrowse link
G Adam9 ADAM metallopeptidase domain 9 involved_in ISO (PMID:11955914)
(MGI:3828410|PMID:11955914)
BHF-UCL PMID:11955914 MGI:3828410 NCBI chrNW_004955463:14,545,425...14,646,498
Ensembl chrNW_004955463:14,545,589...14,645,419
JBrowse link
G Amhr2 anti-Mullerian hormone receptor type 2 acts_upstream_of_or_within ISO PMID:11376112 MGI PMID:11376112 RGD:8554753 NCBI chrNW_004955458:693,434...703,026
Ensembl chrNW_004955458:694,055...702,778
JBrowse link
G Apoa1 apolipoprotein A1 NOT|involved_in ISO (PMID:23726972) UniProt PMID:23726972 NCBI chrNW_004955412:18,170,331...18,172,298
Ensembl chrNW_004955412:18,170,331...18,172,298
JBrowse link
G Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 involved_in ISO (PMID:26583432) UniProt PMID:26583432 NCBI chrNW_004955430:6,986,977...7,018,938
Ensembl chrNW_004955430:6,986,759...7,018,938
JBrowse link
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 involved_in ISO (PMID:26583432) UniProt PMID:26583432 NCBI chrNW_004955405:39,503,020...39,540,069
Ensembl chrNW_004955405:39,503,020...39,540,335
JBrowse link
G Arrb2 arrestin beta 2 involved_in ISO (PMID:12958365) BHF-UCL PMID:12958365 NCBI chrNW_004955467:10,109,985...10,118,687
Ensembl chrNW_004955467:10,110,003...10,123,022
JBrowse link
G Bambi BMP and activin membrane bound inhibitor ISO RGD PMID:12933693 RGD:632261 NCBI chrNW_004955429:21,024,396...21,025,890
Ensembl chrNW_004955429:21,024,374...21,025,890
JBrowse link
G Cdh5 cadherin 5 involved_in ISO (PMID:21168935) UniProt PMID:21168935 NCBI chrNW_004955433:22,957,718...22,994,515
Ensembl chrNW_004955433:22,967,960...22,992,924
JBrowse link
G Cited1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in ISO (PMID:9707553) BHF-UCL PMID:9707553 NCBI chrNW_004955475:11,722,514...11,725,067 JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 acts_upstream_of_or_within ISO (MGI:3690196|PMID:16619037) MGI PMID:16619037 MGI:3690196 NCBI chrNW_004955436:20,370,950...20,372,677
Ensembl chrNW_004955436:20,370,950...20,372,677
JBrowse link
G Cldn5 claudin 5 involved_in ISO (PMID:21168935) UniProt PMID:21168935 NCBI chrNW_004955442:18,509,501...18,511,267
Ensembl chrNW_004955442:18,509,676...18,510,332
JBrowse link
G Col1a2 collagen type I alpha 2 chain involved_in ISO (PMID:17217948) UniProt PMID:17217948 NCBI chrNW_004955432:11,127,961...11,164,145
Ensembl chrNW_004955432:11,128,112...11,163,302
JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISO (PMID:16360482) UniProt PMID:16360482 NCBI chrNW_004955403:9,720,831...9,758,019
Ensembl chrNW_004955403:9,721,114...9,757,887
JBrowse link
G Creb1 cAMP responsive element binding protein 1 ISO RGD PMID:16891311 RGD:1625706 NCBI chrNW_004955457:7,424,403...7,490,630
Ensembl chrNW_004955457:7,431,736...7,491,149
JBrowse link
G Dusp22 dual specificity phosphatase 22 acts_upstream_of_or_within ISO (MGI:2387732|PMID:12138158) MGI PMID:12138158 MGI:2387732 NCBI chrNW_004955465:12,551,063...12,597,386
Ensembl chrNW_004955465:12,551,063...12,592,572
JBrowse link
G Eng endoglin involved_in
NOT|involved_in
ISO (PMID:8294451)
(PMID:18223685)
(PMID:12015308), (PMID:18223685)
BHF-UCL PMID:8294451 PMID:12015308 PMID:18223685 NCBI chrNW_004955419:818,797...853,319
Ensembl chrNW_004955419:818,932...852,694
JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in ISO (PMID:21325030) UniProt PMID:21325030 NCBI chrNW_004955409:10,285,780...10,327,286
Ensembl chrNW_004955409:10,285,793...10,327,468
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:9732876) BHF-UCL PMID:9732876 NCBI chrNW_004955523:307,181...310,728
Ensembl chrNW_004955523:305,728...310,728
JBrowse link
G Foxh1 forkhead box H1 involved_in ISO (MGI:1321467|PMID:9858566)
(MGI:1328655|PMID:10349617), (MGI:3055632|PMID:15363409)
BHF-UCL
UniProt
PMID:9858566 PMID:10349617 PMID:15363409 MGI:1321467 MGI:1328655 MGI:3055632 NCBI chrNW_004955454:3,094,015...3,096,060
Ensembl chrNW_004955454:3,094,033...3,095,512
JBrowse link
G Fshb follicle stimulating hormone subunit beta involved_in ISO (PMID:14557487) BHF-UCL PMID:14557487 NCBI chrNW_004955476:8,795,354...8,797,244
Ensembl chrNW_004955476:8,795,351...8,797,244
JBrowse link
G Fut8 fucosyltransferase 8 acts_upstream_of_or_within ISO (MGI:3608245|PMID:16236725) MGI PMID:16236725 MGI:3608245 NCBI chrNW_004955466:4,248,414...4,481,942
Ensembl chrNW_004955466:4,246,336...4,399,751
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 acts_upstream_of_or_within ISO (MGI:3696537|PMID:17159989) MGI PMID:17159989 MGI:3696537 NCBI chrNW_004955494:3,365,826...3,554,735
Ensembl chrNW_004955494:3,393,049...3,554,844
JBrowse link
G Hpgd 15-hydroxyprostaglandin dehydrogenase involved_in ISO (PMID:15574495) UniProt PMID:15574495 NCBI chrNW_004955403:32,569,841...32,614,860
Ensembl chrNW_004955403:32,569,841...32,613,763
JBrowse link
G Itgb1 integrin subunit beta 1 NOT|involved_in ISO (PMID:24036928)
(MGI:5582864|PMID:24036928)
UniProt PMID:24036928 MGI:5582864 NCBI chrNW_004955462:4,454,809...4,483,227
Ensembl chrNW_004955462:4,454,809...4,484,842
JBrowse link
G Itgb5 integrin subunit beta 5 involved_in ISO (PMID:24036928)
(MGI:5582864|PMID:24036928)
UniProt PMID:24036928 MGI:5582864 NCBI chrNW_004955427:23,851,475...23,952,211
Ensembl chrNW_004955427:23,850,261...23,939,950
JBrowse link
G Itgb6 integrin subunit beta 6 acts_upstream_of_or_within ISO (MGI:6376388|PMID:30952606)
(MGI:3040752|PMID:12634787)
MGI PMID:12634787 PMID:30952606 MGI:3040752 MGI:6376388 NCBI chrNW_004955449:13,387,013...13,520,879
Ensembl chrNW_004955449:13,448,084...13,520,879
JBrowse link
G Itgb8 integrin subunit beta 8 acts_upstream_of_or_within ISO (MGI:6376388|PMID:30952606) MGI PMID:30952606 MGI:6376388 NCBI chrNW_004955410:23,011,874...23,099,191
Ensembl chrNW_004955410:23,011,973...23,097,021
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:9732876) BHF-UCL PMID:9732876 NCBI chrNW_004955464:1,107,598...1,110,326 JBrowse link
G Lrrc32 leucine rich repeat containing 32 involved_in ISO (PMID:19750484) UniProt PMID:19750484 NCBI chrNW_004955414:15,296,704...15,309,088
Ensembl chrNW_004955414:15,296,563...15,309,088
JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 acts_upstream_of_or_within ISO (MGI:2389565|PMID:12379497)
(MGI:72661|PMID:7730318)
MGI PMID:7730318 PMID:12379497 MGI:2389565 MGI:72661 NCBI chrNW_004955422:19,714,161...19,730,344
Ensembl chrNW_004955422:19,714,627...19,729,855
JBrowse link
G Ltbp4 latent transforming growth factor beta binding protein 4 acts_upstream_of_or_within ISO (MGI:2386340|PMID:12208849) MGI PMID:12208849 MGI:2386340 NCBI chrNW_004955578:685,960...712,809
Ensembl chrNW_004955578:686,211...712,794
JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 acts_upstream_of_or_within ISO (MGI:2674169|PMID:12941696) MGI PMID:12941696 MGI:2674169 NCBI chrNW_004955446:11,022,091...11,090,136
Ensembl chrNW_004955446:11,021,971...11,090,136
JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 acts_upstream_of_or_within ISO (MGI:3607216|PMID:16145668) MGI PMID:16145668 MGI:3607216 NCBI chrNW_004955411:17,177,335...17,229,957
Ensembl chrNW_004955411:17,177,335...17,229,957
JBrowse link
G Mstn myostatin acts_upstream_of_or_within ISO (MGI:2676508|PMID:12595574) MGI PMID:12595574 MGI:2676508 NCBI chrNW_004955403:8,914,505...8,921,190
Ensembl chrNW_004955403:8,914,482...8,923,465
JBrowse link
G Nlk nemo like kinase involved_in ISO (PMID:15004007) UniProt PMID:15004007 NCBI chrNW_004955481:4,828,441...4,973,734
Ensembl chrNW_004955481:4,828,448...4,973,734
JBrowse link
G Nrros negative regulator of reactive oxygen species involved_in ISO (MGI:6192878|PMID:29909984) UniProt PMID:29909984 MGI:6192878 NCBI chrNW_004955420:12,792,173...12,798,645
Ensembl chrNW_004955420:12,792,111...12,801,963
JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in ISO PMID:22073128 BHF-UCL PMID:22073128 RGD:8554355 NCBI chrNW_004955489:520,875...557,609
Ensembl chrNW_004955489:520,875...557,615
JBrowse link
G Pias2 protein inhibitor of activated STAT 2 NOT|involved_in ISO (PMID:16777850) UniProt PMID:16777850 NCBI chrNW_004955402:32,263,616...32,358,532
Ensembl chrNW_004955402:32,270,348...32,358,312
JBrowse link
G Pml PML nuclear body scaffold acts_upstream_of_or_within ISO (MGI:3054278|PMID:15356634) MGI PMID:15356634 MGI:3054278 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406
JBrowse link
G Ptk2 protein tyrosine kinase 2 involved_in ISO (PMID:24036928) UniProt PMID:24036928 NCBI chrNW_004955461:14,337,914...14,622,779
Ensembl chrNW_004955461:14,337,914...14,556,931
JBrowse link
G Ptprk protein tyrosine phosphatase receptor type K involved_in ISO (PMID:15899872) UniProt PMID:15899872 NCBI chrNW_004955436:8,975,742...9,371,608
Ensembl chrNW_004955436:8,975,554...9,380,971
JBrowse link
G Pxn paxillin involved_in ISO (PMID:24036928)
(MGI:5582864|PMID:24036928)
UniProt PMID:24036928 MGI:5582864 NCBI chrNW_004955455:11,387,140...11,401,178
Ensembl chrNW_004955455:11,388,378...11,403,082
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:23960241) BHF-UCL PMID:23960241 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
JBrowse link
G Skil SKI like proto-oncogene acts_upstream_of_or_within ISO (MGI:3797158|PMID:18212064) MGI PMID:18212064 MGI:3797158 NCBI chrNW_004955420:530,531...554,308
Ensembl chrNW_004955420:530,528...554,551
JBrowse link
G Smad1 SMAD family member 1 involved_in ISO (PMID:9389648) ComplexPortal PMID:9389648 NCBI chrNW_004955428:1,357,398...1,429,521
Ensembl chrNW_004955428:1,361,085...1,429,948
JBrowse link
G Smad2 SMAD family member 2 involved_in
acts_upstream_of_or_within
ISO (PMID:18548003), (PMID:8752209), (PMID:9389648), (PMID:9732876)
(MGI:2153598|PMID:11557747), (MGI:3032478|PMID:14749725)
(MGI:3797158|PMID:18212064)
PMID:22073128
(PMID:8980228)
BHF-UCL
MGI
PMID:8752209 PMID:8980228 PMID:9389648 PMID:9732876 PMID:11557747 More... MGI:2153598 MGI:3032478 MGI:3797158 RGD:8554355 NCBI chrNW_004955402:33,131,760...33,217,144
Ensembl chrNW_004955402:33,136,778...33,216,844
JBrowse link
G Smad3 SMAD family member 3 involved_in
acts_upstream_of_or_within
ISO TGFbeta-1 dependent, in pancreatic stellate cells
(PMID:18548003), (PMID:21947082), (PMID:28467929), (PMID:9732876)
(MGI:3505646|PMID:15239668), (MGI:3690196|PMID:16619037), (MGI:5300220|PMID:21937600)
PMID:22073128
RGD
BHF-UCL
MGI
PMID:9732876 PMID:15239668 PMID:16371439 PMID:16619037 PMID:16891311 More... MGI:3505646 MGI:3690196 MGI:5300220 RGD:1625706 RGD:2300404 RGD:8554355 NCBI chrNW_004955450:8,747,651...8,842,003
Ensembl chrNW_004955450:8,747,651...8,842,136
JBrowse link
G Smad4 SMAD family member 4 involved_in
acts_upstream_of_or_within
ISO (PMID:9389648), (PMID:9732876)
(MGI:3797158|PMID:18212064)
(MGI:3769957|PMID:16330325)
(PMID:25514493)
BHF-UCL
MGI
UniProt
PMID:9389648 PMID:9732876 PMID:16330325 PMID:18212064 PMID:25514493 MGI:3769957 MGI:3797158 NCBI chrNW_004955402:35,956,080...36,001,746
Ensembl chrNW_004955402:35,961,165...35,994,538
JBrowse link
G Smad5 SMAD family member 5 acts_upstream_of_or_within ISO (MGI:1935017|PMID:11376112) MGI PMID:11376112 MGI:1935017 NCBI chrNW_004955408:31,183,727...31,228,355
Ensembl chrNW_004955408:31,183,659...31,229,384
JBrowse link
G Smad7 SMAD family member 7 acts_upstream_of_or_within ISO (MGI:2153598|PMID:11557747) MGI PMID:11557747 MGI:2153598 NCBI chrNW_004955402:34,028,184...34,058,949
Ensembl chrNW_004955402:34,028,063...34,058,291
JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (MGI:6453080|PMID:31314592) ARUK-UCL PMID:31314592 MGI:6453080 NCBI chrNW_004955422:873,735...886,560
Ensembl chrNW_004955422:873,735...886,560
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in ISO (PMID:24036928) UniProt PMID:24036928 NCBI chrNW_004955445:19,213,210...19,227,670
Ensembl chrNW_004955445:19,215,161...19,228,695
JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in ISO (PMID:28467929) ARUK-UCL PMID:28467929 NCBI chrNW_004955451:16,320,326...16,348,505
Ensembl chrNW_004955451:16,319,904...16,357,687
JBrowse link
G Tab1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 acts_upstream_of_or_within ISO (MGI:2447107|PMID:12464436) MGI PMID:12464436 MGI:2447107 NCBI chrNW_004955413:25,290,733...25,315,267
Ensembl chrNW_004955413:25,290,828...25,313,969
JBrowse link
G Tgfb1 transforming growth factor beta 1 acts_upstream_of_or_within
involved_in
ISO (MGI:2386340|PMID:12208849), (MGI:5543310|PMID:23868260)
(PMID:11157754), (PMID:1333888), (PMID:28467929), (PMID:31023188), (PMID:9389648)
MGI
ComplexPortal
RGD
PMID:1333888 PMID:9389648 PMID:11157754 PMID:12208849 PMID:23868260 More... MGI:2386340 MGI:5543310 RGD:127229954 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
JBrowse link
G Tgfb2 transforming growth factor beta 2 involved_in ISO (PMID:11157754), (PMID:1333888), (PMID:18358889) ComplexPortal PMID:1333888 PMID:11157754 PMID:18358889 NCBI chrNW_004955406:174,949...249,248
Ensembl chrNW_004955406:172,814...249,248
JBrowse link
G Tgfb3 transforming growth factor beta 3 involved_in ISO (PMID:11157754), (PMID:1333888), (PMID:18718461) ComplexPortal PMID:1333888 PMID:11157754 PMID:18718461 NCBI chrNW_004955438:33,129...55,180
Ensembl chrNW_004955438:29,415...55,180
JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 involved_in
acts_upstream_of_or_within
ISO (PMID:11157754), (PMID:1333888), (PMID:9389648)
(MGI:3703113|PMID:17078885)
(MGI:5298182|PMID:21832243)
(MGI:1933434|PMID:11285230)
(MGI:3820811|PMID:18718461)
(MGI:2679137|PMID:14580334), (MGI:3575204|PMID:15820682)
(PMID:1333888)
RGD
BHF-UCL
MGI
PMID:1333888 PMID:8272871 PMID:9389648 PMID:11157754 PMID:11285230 More... MGI:1933434 MGI:2679137 MGI:3575204 MGI:3703113 MGI:3820811 MGI:5298182 RGD:2302021 RGD:2302517 RGD:737663 NCBI chrNW_004955419:26,490,899...26,546,349
Ensembl chrNW_004955419:26,490,899...26,547,017
JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 involved_in
acts_upstream_of_or_within
ISO (PMID:1333888), (PMID:18453574)
(MGI:4949016|PMID:21420963)
(PMID:11157754), (PMID:1333888)
RGD
BHF-UCL
MGI
PMID:1333888 PMID:11157754 PMID:18453574 PMID:18684975 PMID:21420963 MGI:4949016 RGD:2302517 NCBI chrNW_004955430:21,919,338...21,999,688
Ensembl chrNW_004955430:21,932,553...22,001,837
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 involved_in ISO (PMID:11157754)
(MGI:3699491|PMID:17295310), (MGI:3807767|PMID:11546783)
(MGI:2663364|PMID:12773577)
(PMID:12958365)
BHF-UCL PMID:11157754 PMID:11546783 PMID:12773577 PMID:12958365 PMID:17295310 MGI:2663364 MGI:3699491 MGI:3807767 NCBI chrNW_004955423:2,573,851...2,765,353
Ensembl chrNW_004955423:2,573,795...2,765,772
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:3797158|PMID:18212064) MGI PMID:18212064 MGI:3797158 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 involved_in ISO (PMID:17164348) BHF-UCL PMID:17164348 NCBI chrNW_004955402:2,652,020...2,685,350
Ensembl chrNW_004955402:2,652,020...2,686,117
JBrowse link
G Usp15 ubiquitin specific peptidase 15 involved_in ISO (PMID:22344298)
(PMID:21947082)
UniProt PMID:21947082 PMID:22344298 NCBI chrNW_004955458:9,440,645...9,533,653
Ensembl chrNW_004955458:9,403,097...9,533,653
JBrowse link
G Usp9x ubiquitin specific peptidase 9 X-linked involved_in ISO (PMID:19135894) UniProt PMID:19135894 NCBI chrNW_004955565:1,479,040...1,602,070
Ensembl chrNW_004955565:1,479,040...1,602,070
JBrowse link
G Wfikkn2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 acts_upstream_of_or_within ISO (MGI:2676508|PMID:12595574) MGI PMID:12595574 MGI:2676508 NCBI chrNW_004955451:10,976,748...10,982,482
Ensembl chrNW_004955451:10,976,700...10,982,616
JBrowse link
G Zfyve9 zinc finger FYVE-type containing 9 involved_in ISO (PMID:9865696) UniProt PMID:9865696 NCBI chrNW_004955464:6,805,960...6,935,337
Ensembl chrNW_004955464:6,810,645...6,913,377
JBrowse link
G Zmiz1 zinc finger MIZ-type containing 1 involved_in ISO (PMID:16777850) UniProt PMID:16777850 NCBI chrNW_004955437:13,338,077...13,534,283
Ensembl chrNW_004955437:13,337,825...13,494,889
JBrowse link
G Zmiz2 zinc finger MIZ-type containing 2 NOT|involved_in ISO (PMID:16777850) UniProt PMID:16777850 NCBI chrNW_004955456:7,393,675...7,407,710
Ensembl chrNW_004955456:7,387,346...7,407,807
JBrowse link
G Zyx zyxin involved_in ISO (PMID:24036928)
(MGI:5582864|PMID:24036928)
UniProt PMID:24036928 MGI:5582864 NCBI chrNW_004955494:268,844...277,381
Ensembl chrNW_004955494:269,222...276,904
JBrowse link
transforming growth factor beta receptor signaling pathway involved in heart development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfb1 transforming growth factor beta 1 involved_in ISO (MGI:67103|PMID:8009224) BHF-UCL PMID:8009224 MGI:67103 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
JBrowse link
transforming growth factor beta receptor signaling pathway involved in primitive streak formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (MGI:2677178|PMID:14511481) MGI PMID:14511481 MGI:2677178 NCBI chrNW_004955437:20,828,448...20,835,486
Ensembl chrNW_004955437:20,828,448...20,835,628
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12107
    response to stimulus 6556
      response to endogenous stimulus 1727
        response to transforming growth factor beta 261
          cellular response to transforming growth factor beta stimulus 252
            negative regulation of cellular response to transforming growth factor beta stimulus 4
            positive regulation of cellular response to transforming growth factor beta stimulus + 31
            regulation of cellular response to transforming growth factor beta stimulus + 123
            transforming growth factor beta receptor signaling pathway + 177
Path 2
Term Annotations click to browse term
  biological_process 12107
    response to stimulus 6556
      response to chemical 3800
        response to organic substance 3076
          response to growth factor 745
            cellular response to growth factor stimulus 705
              cellular response to transforming growth factor beta stimulus 252
                negative regulation of cellular response to transforming growth factor beta stimulus 4
                positive regulation of cellular response to transforming growth factor beta stimulus + 31
                regulation of cellular response to transforming growth factor beta stimulus + 123
                transforming growth factor beta receptor signaling pathway + 177
paths to the root