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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to external stimulus
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Accession:GO:0071496 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external stimulus.
Comment:Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.


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cell-cell adhesion in response to extracellular stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itga4 integrin subunit alpha 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:10,215,283...10,293,653
Ensembl chrNW_004936509:10,215,283...10,292,252
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936748:785,491...802,791
Ensembl chrNW_004936748:785,455...803,048
JBrowse link
cellular response to amino acid starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf3 activating transcription factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:909,302...922,619
Ensembl chrNW_004936557:908,318...922,624
JBrowse link
G Atf4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:2,114,478...2,115,969
Ensembl chrNW_004936492:2,110,634...2,115,996
JBrowse link
G Atxn3 ataxin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936733:306,400...347,161
Ensembl chrNW_004936733:310,836...347,112
JBrowse link
G Becn1 beclin 1 ISO RGD PMID:22835012 RGD:11561942 NCBI chrNW_004936490:17,518,100...17,531,126
Ensembl chrNW_004936490:17,517,751...17,531,151
JBrowse link
G Bmt2 base methyltransferase of 25S rRNA 2 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936589:5,578,566...5,657,093
Ensembl chrNW_004936589:5,578,519...5,659,400
JBrowse link
G Castor1 cytosolic arginine sensor for mTORC1 subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936904:372,609...376,878
Ensembl chrNW_004936904:373,198...376,370
JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:22,717,308...22,725,127
Ensembl chrNW_004936476:22,717,260...22,725,182
JBrowse link
G DAP death associated protein involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 Ensembl chrNW_004936643:2,705,049...2,752,128 JBrowse link
G Dapl1 death associated protein like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936469:19,745,276...19,766,112
Ensembl chrNW_004936469:19,745,234...19,766,303
JBrowse link
G Depdc5 DEP domain containing 5, GATOR1 subcomplex subunit involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936755:871,935...1,024,538
Ensembl chrNW_004936755:872,815...1,024,057
JBrowse link
G Eif2ak2 eukaryotic translation initiation factor 2 alpha kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936663:1,127,047...1,157,263
Ensembl chrNW_004936663:1,126,977...1,157,137
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936712:413,602...454,443
Ensembl chrNW_004936712:414,446...454,449
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:3,423,792...3,527,089
Ensembl chrNW_004936471:3,423,813...3,526,913
JBrowse link
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:10,746,687...10,769,304
Ensembl chrNW_004936495:10,745,923...10,773,199
JBrowse link
G Fas Fas cell surface death receptor involved_in ISO (PMID:11096076) CAFA PMID:11096076 NCBI chrNW_004936735:209,369...234,582 JBrowse link
G Flcn folliculin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936741:881,150...901,296
Ensembl chrNW_004936741:880,736...901,468
JBrowse link
G Gcn1 GCN1 activator of EIF2AK4 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936668:718,961...786,101
Ensembl chrNW_004936668:724,031...785,533
JBrowse link
G Gpr155 G protein-coupled receptor 155 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:4,202,587...4,252,865
Ensembl chrNW_004936509:4,204,362...4,252,949
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L ISO RGD PMID:19273590 RGD:9999430 NCBI chrNW_004936661:1,793,791...1,806,564
Ensembl chrNW_004936661:1,793,801...1,806,579
JBrowse link
G Impact impact RWD domain protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936550:3,765,952...3,795,183
Ensembl chrNW_004936550:3,766,061...3,795,112
JBrowse link
G Itfg2 integrin alpha FG-GAP repeat containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:3,144,616...3,158,825
Ensembl chrNW_004936606:3,144,602...3,158,890
JBrowse link
G Kics2 KICSTOR subunit 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936545:2,577,388...2,602,698
Ensembl chrNW_004936545:2,580,768...2,602,696
JBrowse link
G Kptn kaptin, actin binding protein involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936664:1,146,003...1,155,571
Ensembl chrNW_004936664:1,146,293...1,152,968
JBrowse link
G Lars1 leucyl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:8,500,024...8,568,477
Ensembl chrNW_004936504:8,499,978...8,570,715
JBrowse link
G LOC101966958 GATOR complex protein WDR59 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936475:23,754,525...23,803,942
Ensembl chrNW_004936475:23,726,314...23,803,854
JBrowse link
G Map1lc3a microtubule associated protein 1 light chain 3 alpha ISO RGD PMID:22835012 RGD:11561942 NCBI chrNW_004936561:6,104,748...6,106,348
Ensembl chrNW_004936561:6,104,742...6,106,699
JBrowse link
G Map3k5 mitogen-activated protein kinase kinase kinase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:3,988,696...4,197,953
Ensembl chrNW_004936560:3,989,420...4,197,501
JBrowse link
G Mapk1 mitogen-activated protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:1,889,841...1,932,646
Ensembl chrNW_004936619:1,889,708...1,932,646
JBrowse link
G Mapk3 mitogen-activated protein kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:12,342,670...12,390,650
Ensembl chrNW_004936501:12,384,804...12,392,180
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936728:1,775,746...1,893,895
Ensembl chrNW_004936728:1,775,641...1,893,907
JBrowse link
G Mios meiosis regulator for oocyte development involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936585:2,296,713...2,331,737
Ensembl chrNW_004936585:2,296,830...2,331,601
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:158,376...282,310
Ensembl chrNW_004936474:157,590...282,342
JBrowse link
G Nprl2 NPR2 like, GATOR1 complex subunit involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004939530:1,745...5,100
Ensembl chrNW_004939530:1,769...5,100
JBrowse link
G Nprl3 NPR3 like, GATOR1 complex subunit involved_in IEA Ensembl
TreeGrafter
UniProt
GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:747,806...783,479
Ensembl chrNW_004936501:747,736...787,244
JBrowse link
G Prkch protein kinase C eta involved_in ISO (PMID:19797084) UniProt PMID:19797084 NCBI chrNW_004936495:5,426,243...5,638,250
Ensembl chrNW_004936495:5,426,243...5,638,245
JBrowse link
G Prkd1 protein kinase D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936494:4,469,092...4,601,183
Ensembl chrNW_004936494:4,469,089...4,601,214
JBrowse link
G Rnf152 ring finger protein 152 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936497:3,357,464...3,421,813
Ensembl chrNW_004936497:3,420,724...3,421,335
JBrowse link
G Rpl17 ribosomal protein L17 ISO RGD PMID:8144559 RGD:1304507 NCBI chrNW_004936497:13,457,328...13,460,606 JBrowse link
G Rps25 ribosomal protein S25 ISO RGD PMID:8144559 RGD:1304507 NCBI chrNW_004936542:3,974,796...3,977,155
Ensembl chrNW_004936542:3,974,804...3,976,816
JBrowse link
G Rraga Ras related GTP binding A involved_in ISO (PMID:25936802) UniProt PMID:25936802 NCBI chrNW_004936652:991,832...993,439 JBrowse link
G Rragb Ras related GTP binding B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936819:946,874...988,531
Ensembl chrNW_004936819:955,527...988,644
JBrowse link
G Rragc Ras related GTP binding C involved_in IEA Ensembl GO_REF:0000107
G Seh1l SEH1 like nucleoporin involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936626:2,538,655...2,562,468
Ensembl chrNW_004936626:2,540,710...2,562,595
JBrowse link
G Sesn1 sestrin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936564:5,187,152...5,291,201
Ensembl chrNW_004936564:5,187,005...5,291,498
JBrowse link
G Sesn2 sestrin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:12,416,652...12,436,799
Ensembl chrNW_004936474:12,416,652...12,436,814
JBrowse link
G Sesn3 sestrin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936700:2,429,535...2,491,752
Ensembl chrNW_004936700:2,429,446...2,488,127
JBrowse link
G Sh3glb1 SH3 domain containing GRB2 like, endophilin B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936732:2,066,848...2,097,947
Ensembl chrNW_004936732:2,067,204...2,097,631
JBrowse link
G Slc38a2 solute carrier family 38 member 2 ISO RGD PMID:11311116 RGD:68721 NCBI chrNW_004936512:4,543,845...4,557,118
Ensembl chrNW_004936512:4,543,820...4,557,142
JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:24,788,175...24,837,471
Ensembl chrNW_004936474:24,788,195...24,837,395
JBrowse link
G Tfeb transcription factor EB involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:18,189,096...18,233,622
Ensembl chrNW_004936476:18,189,041...18,233,701
JBrowse link
G Ucp2 uncoupling protein 2 ISO glutamine RGD PMID:18692019 RGD:7240714 NCBI chrNW_004936498:3,059,700...3,066,112
Ensembl chrNW_004936498:3,059,297...3,066,197
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in ISO (MGI:5607224|PMID:21855797) ParkinsonsUK-UCL PMID:21855797 MGI:5607224 NCBI chrNW_004936660:2,160,394...2,188,848
Ensembl chrNW_004936660:2,163,844...2,187,080
JBrowse link
G Wdr24 WD repeat domain 24 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:321,877...326,984
Ensembl chrNW_004936501:321,924...327,253
JBrowse link
cellular response to calcium ion starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp1r15a protein phosphatase 1 regulatory subunit 15A ISO RGD PMID:9878749 RGD:9999163 NCBI chrNW_004936664:2,910,609...2,914,205 JBrowse link
cellular response to cell-matrix adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within ISO (MGI:3712614|PMID:17286598) MGI PMID:17286598 MGI:3712614 NCBI chrNW_004936905:458,062...463,359
Ensembl chrNW_004936905:458,298...463,346
JBrowse link
G Fscn1 fascin actin-bundling protein 1 ISO RGD PMID:7657718 RGD:2317778 NCBI chrNW_004936765:609,894...619,417
Ensembl chrNW_004936765:609,861...619,456
JBrowse link
G Gstp1 glutathione S-transferase pi 1 ISO RGD PMID:10793289 RGD:2317832 NCBI chrNW_004936599:2,197,681...2,200,642
Ensembl chrNW_004936599:2,197,634...2,201,050
JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO RGD PMID:12963432 PMID:20218972 RGD:2325787 RGD:2325968 NCBI chrNW_004936514:7,038,240...7,045,873
Ensembl chrNW_004936514:7,037,639...7,045,793
JBrowse link
G Skp2 S-phase kinase associated protein 2 ISO RGD PMID:11425869 RGD:2315071 NCBI chrNW_004936518:5,635,856...5,664,057
Ensembl chrNW_004936518:5,637,331...5,664,778
JBrowse link
cellular response to external biotic stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1 ATP binding cassette subfamily B member 1 ISO RGD PMID:16353156 RGD:2316359 NCBI chrNW_004936763:1,225,355...1,308,257
Ensembl chrNW_004936763:1,226,482...1,297,427
JBrowse link
G Cda cytidine deaminase ISO K-selection - confluent culture RGD PMID:16353156 RGD:2316359 NCBI chrNW_004936474:6,543,295...6,564,575
Ensembl chrNW_004936474:6,543,220...6,566,308
JBrowse link
cellular response to extracellular stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2b adenosine A2b receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:65736|PMID:8157966) MGI
Ensembl
PMID:8157966 GO_REF:0000107 MGI:65736 NCBI chrNW_004936821:583,463...608,189
Ensembl chrNW_004936821:580,675...608,245
JBrowse link
G Arhgap35 Rho GTPase activating protein 35 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:714,036...788,584
Ensembl chrNW_004936664:713,984...789,344
JBrowse link
G Axl AXL receptor tyrosine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1335904|PMID:10322635) MGI
Ensembl
PMID:10322635 GO_REF:0000107 MGI:1335904 NCBI chrNW_004936661:3,658,140...3,687,290
Ensembl chrNW_004936661:3,657,831...3,687,816
JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:22,717,308...22,725,127
Ensembl chrNW_004936476:22,717,260...22,725,182
JBrowse link
G Cdkn2b cyclin dependent kinase inhibitor 2B involved_in ISO (PMID:17553787) BHF-UCL PMID:17553787 NCBI chrNW_004936652:3,576,975...3,582,790
Ensembl chrNW_004936652:3,538,986...3,581,159
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1096764|PMID:9294610) MGI
Ensembl
PMID:9294610 GO_REF:0000107 MGI:1096764 NCBI chrNW_004936488:4,384,710...4,388,118
Ensembl chrNW_004936488:4,384,705...4,388,122
JBrowse link
G Fosl1 FOS like 1, AP-1 transcription factor subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1096764|PMID:9294610) MGI
Ensembl
PMID:9294610 GO_REF:0000107 MGI:1096764 NCBI chrNW_004936599:3,642,504...3,649,294
Ensembl chrNW_004936599:3,642,504...3,648,417
JBrowse link
G Gsdmd gasdermin D acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1335904|PMID:10322635) MGI
Ensembl
PMID:10322635 GO_REF:0000107 MGI:1335904 NCBI chrNW_004936470:8,567,085...8,571,448
Ensembl chrNW_004936470:8,567,091...8,571,467
JBrowse link
G Itga6 integrin subunit alpha 6 acts_upstream_of_or_within ISO (MGI:1335904|PMID:10322635) MGI PMID:10322635 MGI:1335904 NCBI chrNW_004936509:2,508,446...2,587,643
Ensembl chrNW_004936509:2,508,375...2,587,669
JBrowse link
G Ldha lactate dehydrogenase A acts_upstream_of_or_within ISO (MGI:1335904|PMID:10322635) MGI PMID:10322635 MGI:1335904 NCBI chrNW_004936528:866,607...879,977 JBrowse link
G LOC101957084 plectin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:8,194,124...8,252,139
Ensembl chrNW_004936470:8,216,205...8,250,978
JBrowse link
G LOC101966831 asialoglycoprotein receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:58018|PMID:3215517) MGI
Ensembl
PMID:3215517 GO_REF:0000107 MGI:58018 NCBI chrNW_004936595:475,816...479,180
Ensembl chrNW_004936595:476,438...479,030
JBrowse link
G LOC101977127 cyclin-dependent kinase inhibitor 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936652:3,539,004...3,545,321 JBrowse link
G Nr4a2 nuclear receptor subfamily 4 group A member 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:84485|PMID:8961274)
(PMID:7877627)
MGI
Ensembl
PMID:7877627 PMID:8961274 GO_REF:0000107 MGI:84485 NCBI chrNW_004936469:21,912,118...21,920,486
Ensembl chrNW_004936469:21,912,047...21,920,486
JBrowse link
G P2rx7 purinergic receptor P2X 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3772417|PMID:18082965) MGI
Ensembl
PMID:18082965 GO_REF:0000107 MGI:3772417 NCBI chrNW_004936558:3,106,819...3,149,689
Ensembl chrNW_004936558:3,108,283...3,149,765
JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:5,266,653...5,378,464
Ensembl chrNW_004936567:5,267,615...5,378,258
JBrowse link
G Sfrp2 secreted frizzled related protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1335904|PMID:10322635) MGI
Ensembl
PMID:10322635 GO_REF:0000107 MGI:1335904 NCBI chrNW_004936576:604,174...612,440
Ensembl chrNW_004936576:604,069...613,021
JBrowse link
G Slc1a2 solute carrier family 1 member 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3608234|PMID:16197522) MGI
Ensembl
PMID:16197522 GO_REF:0000107 MGI:3608234 NCBI chrNW_004936533:2,779,650...2,918,640
Ensembl chrNW_004936533:2,779,518...2,918,298
JBrowse link
G Tle5 TLE family member 5, transcriptional modulator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1335904|PMID:10322635) MGI
Ensembl
PMID:10322635 GO_REF:0000107 MGI:1335904 NCBI chrNW_004936588:1,746,300...1,753,727
Ensembl chrNW_004936588:1,746,843...1,752,275
JBrowse link
cellular response to folic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Folr1 folate receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:1,489,916...1,497,200
Ensembl chrNW_004936498:1,491,547...1,497,226
JBrowse link
G Folr2 folate receptor beta involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936498:1,516,719...1,522,187
Ensembl chrNW_004936498:1,516,710...1,522,347
JBrowse link
cellular response to glucose starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asns asparagine synthetase (glutamine-hydrolyzing) involved_in ISO
IEA
RGD
Ensembl
PMID:10085239 GO_REF:0000107 RGD:2315999 NCBI chrNW_004936585:2,834,202...2,854,740
Ensembl chrNW_004936585:2,834,008...2,855,387
JBrowse link
G Atf4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:2,114,478...2,115,969
Ensembl chrNW_004936492:2,110,634...2,115,996
JBrowse link
G Atg14 autophagy related 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:155,709...195,860
Ensembl chrNW_004936495:154,593...195,917
JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:77298|PMID:7595537) MGI
Ensembl
PMID:7595537 GO_REF:0000107 MGI:77298 NCBI chrNW_004936497:2,209,136...2,373,580
Ensembl chrNW_004936497:2,210,334...2,210,921
JBrowse link
G Becn1 beclin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:17,518,100...17,531,126
Ensembl chrNW_004936490:17,517,751...17,531,151
JBrowse link
G Bhlha15 basic helix-loop-helix family member a15 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936750:752,887...756,562
Ensembl chrNW_004936750:753,615...754,187
JBrowse link
G Chka choline kinase alpha involved_in ISO (PMID:34077757) UniProt PMID:34077757 NCBI chrNW_004936599:2,031,953...2,068,423
Ensembl chrNW_004936599:2,001,673...2,067,399
JBrowse link
G Cpeb4 cytoplasmic polyadenylation element binding protein 4 involved_in ISO PMID:20937770 UniProt PMID:20937770 RGD:8553637 NCBI chrNW_004936609:1,793,027...1,858,586
Ensembl chrNW_004936609:1,793,027...1,858,597
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936712:413,602...454,443
Ensembl chrNW_004936712:414,446...454,449
JBrowse link
G Foxo3 forkhead box O3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936564:4,788,036...4,907,600
Ensembl chrNW_004936564:4,787,992...4,903,837
JBrowse link
G Fxn frataxin ISO RGD PMID:21863062 RGD:401793715 NCBI chrNW_004936503:5,323,206...5,343,228 JBrowse link
G Gck glucokinase ISO down-regulation of the counterregulatory response to insulin-induced hypoglycemia RGD PMID:18292346 RGD:2301900 NCBI chrNW_004936478:19,104,477...19,118,915
Ensembl chrNW_004936478:19,105,361...19,158,733
JBrowse link
G Higd1a HIG1 hypoxia inducible domain family member 1A acts_upstream_of_or_within ISO (MGI:3654896|PMID:16815968)
(MGI:5643884|PMID:25683712)
MGI PMID:16815968 PMID:25683712 MGI:3654896 MGI:5643884 NCBI chrNW_004936695:2,330,939...2,341,387
Ensembl chrNW_004936695:2,330,465...2,341,681
JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 involved_in ISO (PMID:25689357) CAFA PMID:25689357 NCBI chrNW_004936512:11,481,017...11,487,737 JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:13,348,465...13,352,717
Ensembl chrNW_004936487:13,348,465...13,352,717
JBrowse link
G Itfg2 integrin alpha FG-GAP repeat containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:3,144,616...3,158,825
Ensembl chrNW_004936606:3,144,602...3,158,890
JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:3,767,526...3,775,416
Ensembl chrNW_004936599:3,766,242...3,776,128
JBrowse link
G Kics2 KICSTOR subunit 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936545:2,577,388...2,602,698
Ensembl chrNW_004936545:2,580,768...2,602,696
JBrowse link
G Kptn kaptin, actin binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:1,146,003...1,155,571
Ensembl chrNW_004936664:1,146,293...1,152,968
JBrowse link
G Mtmr3 myotubularin related protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937211:67,199...92,204
Ensembl chrNW_004937211:55,221...92,040
JBrowse link
G Mybbp1a MYB binding protein 1a involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:1,095,022...1,108,545
Ensembl chrNW_004936677:1,095,420...1,108,496
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:6,589,967...6,621,171
Ensembl chrNW_004936509:6,590,630...6,620,262
JBrowse link
G Nuak2 NUAK family kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:7,085,777...7,104,430
Ensembl chrNW_004936557:7,085,719...7,104,443
JBrowse link
G Pick1 protein interacting with PRKCA 1 involved_in ISO PMID:23843614 UniProt PMID:23843614 RGD:8553949 NCBI chrNW_004936492:3,098,196...3,115,921
Ensembl chrNW_004936492:3,097,629...3,116,526
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase catalytic subunit type 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936517:4,009,938...4,145,518
Ensembl chrNW_004936517:4,033,247...4,145,422
JBrowse link
G Pik3r4 phosphoinositide-3-kinase regulatory subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:4,162,276...4,232,471
Ensembl chrNW_004936529:4,162,112...4,232,510
JBrowse link
G Plin2 perilipin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936652:1,039,248...1,059,983
Ensembl chrNW_004936652:1,039,259...1,060,122
JBrowse link
G Plin3 perilipin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,829,536...2,842,427
Ensembl chrNW_004936588:2,829,282...2,842,501
JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in ISO (PMID:21145489) UniProt PMID:21145489 NCBI chrNW_004936497:4,985,995...4,986,720 JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:1,817,051...1,843,376
Ensembl chrNW_004936518:1,804,969...1,843,380
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:4,872,360...4,939,873
Ensembl chrNW_004936522:4,875,046...4,939,879
JBrowse link
G Prkcd protein kinase C delta ISO RGD PMID:17728702 RGD:1642520 NCBI chrNW_004936473:3,892,625...3,923,467
Ensembl chrNW_004936473:3,892,366...3,923,515
JBrowse link
G Rrp8 ribosomal RNA processing 8 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936842:656,508...661,894
Ensembl chrNW_004936842:657,727...661,757
JBrowse link
G Sesn1 sestrin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936564:5,187,152...5,291,201
Ensembl chrNW_004936564:5,187,005...5,291,498
JBrowse link
G Sesn2 sestrin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:12,416,652...12,436,799
Ensembl chrNW_004936474:12,416,652...12,436,814
JBrowse link
G Sesn3 sestrin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936700:2,429,535...2,491,752
Ensembl chrNW_004936700:2,429,446...2,488,127
JBrowse link
G Sh3glb1 SH3 domain containing GRB2 like, endophilin B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936732:2,066,848...2,097,947
Ensembl chrNW_004936732:2,067,204...2,097,631
JBrowse link
G Sirt1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:10,296,097...10,316,673
Ensembl chrNW_004936521:10,296,097...10,322,215
JBrowse link
G Slc2a1 solute carrier family 2 member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1932248|PMID:11259273) MGI
Ensembl
PMID:11259273 GO_REF:0000107 MGI:1932248 NCBI chrNW_004936474:24,205,878...24,236,611
Ensembl chrNW_004936474:24,206,644...24,236,713
JBrowse link
G Slc3a2 solute carrier family 3 member 2 ISO RGD PMID:22185814 RGD:151361127 NCBI chrNW_004936581:424,801...441,592 JBrowse link
G Slc7a5 solute carrier family 7 member 5 ISO RGD PMID:22185814 RGD:151361127 NCBI chrNW_004936641:1,513,110...1,538,955 JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936721:646,778...661,144
Ensembl chrNW_004936721:646,772...661,091
JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:24,788,175...24,837,471
Ensembl chrNW_004936474:24,788,195...24,837,395
JBrowse link
G Tbl2 transducin beta like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,825,990...2,833,908
Ensembl chrNW_004936543:2,824,770...2,833,922
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14744935) MGI
Ensembl
PMID:14744935 GO_REF:0000107 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
JBrowse link
G Upp1 uridine phosphorylase 1 ISO RGD PMID:18457515 RGD:2317094 NCBI chrNW_004936478:22,508,602...22,531,604
Ensembl chrNW_004936478:22,508,559...22,531,898
JBrowse link
G Vldlr very low density lipoprotein receptor ISO RGD PMID:18262491 RGD:2324645 NCBI chrNW_004936503:2,407,040...2,440,366
Ensembl chrNW_004936503:2,405,689...2,440,502
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (MGI:5607242|PMID:17612490) UniProt PMID:17612490 MGI:5607242 NCBI chrNW_004936657:2,891,171...2,895,409
Ensembl chrNW_004936657:2,891,907...2,896,174
JBrowse link
G Ywhag tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,062,137...2,096,207
Ensembl chrNW_004936543:2,061,794...2,096,525
JBrowse link
G Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta involved_in ISO (PMID:18439900) UniProt PMID:18439900 NCBI chrNW_004936470:42,444,671...42,470,548
Ensembl chrNW_004936470:42,445,412...42,470,900
JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:19,714,145...19,722,512
Ensembl chrNW_004936474:19,714,153...19,722,528
JBrowse link
cellular response to iron ion starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hfe homeostatic iron regulator ISO RGD PMID:16208485 RGD:1582698 NCBI chrNW_004936671:1,940,079...1,947,574
Ensembl chrNW_004936671:1,940,101...1,947,580
JBrowse link
cellular response to L-ascorbic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eln elastin ISO RGD PMID:2859894 RGD:9585689 NCBI chrNW_004936543:3,135,169...3,165,023 JBrowse link
G Lep leptin ISO RGD PMID:20400526 RGD:5128594 NCBI chrNW_004936479:15,394,966...15,411,334
Ensembl chrNW_004936479:15,394,966...15,411,334
JBrowse link
cellular response to leucine starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 acts_upstream_of_or_within_positive_effect
involved_in
ISO
IEA
(MGI:5007596|PMID:21533046) MGI
Ensembl
PMID:21533046 GO_REF:0000107 MGI:5007596 NCBI chrNW_004936509:4,729,984...4,826,367
Ensembl chrNW_004936509:4,732,930...4,826,443
JBrowse link
G Atf4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:2,114,478...2,115,969
Ensembl chrNW_004936492:2,110,634...2,115,996
JBrowse link
G Lars1 leucyl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:8,500,024...8,568,477
Ensembl chrNW_004936504:8,499,978...8,570,715
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:158,376...282,310
Ensembl chrNW_004936474:157,590...282,342
JBrowse link
G Rnf167 ring finger protein 167 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:2,766,724...2,771,111
Ensembl chrNW_004936677:2,766,907...2,770,225
JBrowse link
G Rragb Ras related GTP binding B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936819:946,874...988,531
Ensembl chrNW_004936819:955,527...988,644
JBrowse link
G Rragd Ras related GTP binding D involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936510:2,810,028...2,849,792
Ensembl chrNW_004936510:2,810,022...2,853,306
JBrowse link
G Sar1a secretion associated Ras related GTPase 1A involved_in ISO (PMID:34290409) UniProt PMID:34290409 NCBI chrNW_004936521:8,422,511...8,439,945
Ensembl chrNW_004936521:8,422,446...8,441,333
JBrowse link
G Sar1b secretion associated Ras related GTPase 1B involved_in ISO (PMID:34290409) UniProt PMID:34290409 NCBI chrNW_004936647:697,930...723,577 JBrowse link
G Sesn1 sestrin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936564:5,187,152...5,291,201
Ensembl chrNW_004936564:5,187,005...5,291,498
JBrowse link
G Sesn2 sestrin 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:12,416,652...12,436,799
Ensembl chrNW_004936474:12,416,652...12,436,814
JBrowse link
G Sesn3 sestrin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936700:2,429,535...2,491,752
Ensembl chrNW_004936700:2,429,446...2,488,127
JBrowse link
cellular response to magnesium starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B ISO RGD PMID:17428633 RGD:4106247 NCBI chrNW_004936587:3,406,055...3,806,956
Ensembl chrNW_004936587:3,405,698...3,804,664
JBrowse link
cellular response to mechanical stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afap1 actin filament associated protein 1 ISO mechanical cyclic stretching RGD PMID:12114187 RGD:625602 NCBI chrNW_004936477:19,288,075...19,418,543
Ensembl chrNW_004936477:19,287,856...19,418,568
JBrowse link
G Agt angiotensinogen ISO RGD PMID:21131638 RGD:5129192 NCBI chrNW_004936484:19,713,299...19,721,144
Ensembl chrNW_004936484:19,716,165...19,721,261
JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO RGD PMID:20042609 RGD:7242068 NCBI chrNW_004936621:620,163...639,115
Ensembl chrNW_004936621:620,074...639,093
JBrowse link
G Ankrd1 ankyrin repeat domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:3,502,844...3,510,919
Ensembl chrNW_004936601:3,502,844...3,511,003
JBrowse link
G Aqp1 aquaporin 1 (Colton blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:7,146,997...7,160,369
Ensembl chrNW_004936478:7,147,027...7,160,401
JBrowse link
G Arhgdia Rho GDP dissociation inhibitor alpha ISO RGD PMID:18566890 RGD:9684962 NCBI chrNW_004936594:5,383,370...5,386,618
Ensembl chrNW_004936594:5,383,380...5,386,494
JBrowse link
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 ISO RGD PMID:17458903 RGD:6903221 NCBI chrNW_004936627:1,555,151...1,584,370
Ensembl chrNW_004936627:1,554,873...1,584,638
JBrowse link
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 ISO RGD PMID:16893515 PMID:17458903 RGD:1581763 RGD:6903221 NCBI chrNW_004936740:489,357...514,235
Ensembl chrNW_004936740:488,154...514,308
JBrowse link
G Bad BCL2 associated agonist of cell death involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:4,924,349...4,933,683
Ensembl chrNW_004936599:4,924,789...4,933,368
JBrowse link
G Bag3 BAG cochaperone 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3656163|PMID:16936253) MGI
Ensembl
PMID:16936253 GO_REF:0000107 MGI:3656163 NCBI chrNW_004936486:8,985,871...9,007,461
Ensembl chrNW_004936486:8,985,761...9,007,502
JBrowse link
G Bak1 BCL2 antagonist/killer 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:25,347,608...25,354,772
Ensembl chrNW_004936476:25,347,545...25,355,789
JBrowse link
G Bcl10 BCL10 immune signaling adaptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:434,740...442,162
Ensembl chrNW_004936608:434,978...442,391
JBrowse link
G Bmp2 bone morphogenetic protein 2 ISO RGD PMID:20877159 RGD:9068439 NCBI chrNW_004936485:12,428,765...12,439,570
Ensembl chrNW_004936485:12,428,710...12,439,454
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO RGD PMID:20877159 RGD:9068439 NCBI chrNW_004936697:1,054,237...1,061,468
Ensembl chrNW_004936697:1,056,636...1,061,468
JBrowse link
G Bmp6 bone morphogenetic protein 6 ISO RGD PMID:23198877 RGD:7242187 NCBI chrNW_004936534:4,707,658...4,871,865
Ensembl chrNW_004936534:4,709,064...4,871,023
JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:18,449,371...18,460,435
Ensembl chrNW_004936486:18,448,494...18,455,927
JBrowse link
G Casp2 caspase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:739,325...754,259
Ensembl chrNW_004936527:739,281...754,331
JBrowse link
G Casp8 caspase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936726:554,627...596,334
Ensembl chrNW_004936726:554,758...595,922
JBrowse link
G Casp8ap2 caspase 8 associated protein 2 involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chrNW_004936510:2,420,924...2,447,634
Ensembl chrNW_004936510:2,420,920...2,447,986
JBrowse link
G Cav1 caveolin 1 ISO RGD PMID:20172952 RGD:6849300 NCBI chrNW_004936589:2,504,235...2,536,778
Ensembl chrNW_004936589:2,504,224...2,537,170
JBrowse link
G Cd40 CD40 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:6,936,915...6,947,246
Ensembl chrNW_004936514:6,936,572...6,947,280
JBrowse link
G Chek1 checkpoint kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936743:2,004,535...2,027,287
Ensembl chrNW_004936743:2,005,851...2,026,587
JBrowse link
G Cnn2 calponin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:16236705) MGI
Ensembl
PMID:16236705 GO_REF:0000107 NCBI chrNW_004936588:453,908...459,916
Ensembl chrNW_004936588:453,876...460,015
JBrowse link
G Col1a1 collagen type I alpha 1 chain involved_in ISO
IEA
uniaxial mechanical tension RGD
Ensembl
PMID:22615126 GO_REF:0000107 RGD:8552682 NCBI chrNW_004936490:11,448,552...11,465,836
Ensembl chrNW_004936490:11,448,654...11,464,444
JBrowse link
G Col2a1 collagen type II alpha 1 chain ISO cyclic compressive stress RGD PMID:19725071 RGD:8661239 NCBI chrNW_004936512:5,861,933...5,894,898
Ensembl chrNW_004936512:5,861,933...5,892,853
JBrowse link
G Cradd CASP2 and RIPK1 domain containing adaptor with death domain involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936507:10,077,345...10,264,705
Ensembl chrNW_004936507:10,098,171...10,264,716
JBrowse link
G Ctnnb1 catenin beta 1 ISO RGD PMID:20042609 RGD:7242068 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293
JBrowse link
G Dag1 dystroglycan 1 ISO RGD PMID:18556591 RGD:11541067 NCBI chrNW_004936529:1,099,510...1,171,587
Ensembl chrNW_004936529:1,099,647...1,173,124
JBrowse link
G Ednra endothelin receptor type A ISO RGD PMID:18320471 RGD:4889461 NCBI chrNW_004936535:1,950,117...2,005,786
Ensembl chrNW_004936535:1,949,941...2,005,910
JBrowse link
G Egfr epidermal growth factor receptor ISO mechanical stretch RGD PMID:20927110 RGD:5131524 NCBI chrNW_004936678:365,005...560,546
Ensembl chrNW_004936678:365,834...436,528
JBrowse link
G Egr1 early growth response 1 ISO cyclic stretch RGD PMID:16998809 RGD:5131896 NCBI chrNW_004936531:7,625,956...7,629,041
Ensembl chrNW_004936531:7,625,892...7,629,749
JBrowse link
G Eng endoglin ISO mechanical stretch RGD PMID:22941949 RGD:7248789 NCBI chrNW_004936487:15,467,165...15,499,180
Ensembl chrNW_004936487:15,467,835...15,477,488
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:24157151 RGD:13204713 NCBI chrNW_004937067:194,375...246,607 JBrowse link
G F11r F11 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936903:317,975...338,892
Ensembl chrNW_004936903:315,716...338,932
JBrowse link
G F2 coagulation factor II, thrombin ISO RGD PMID:22915765 RGD:6893464 NCBI chrNW_004936562:2,371,725...2,388,617
Ensembl chrNW_004936562:2,372,044...2,388,650
JBrowse link
G Fadd Fas associated via death domain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:633,501...639,412
Ensembl chrNW_004936599:633,330...639,456
JBrowse link
G Fas Fas cell surface death receptor involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chrNW_004936735:209,369...234,582 JBrowse link
G Gadd45a growth arrest and DNA damage inducible alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936591:3,998,359...4,001,491
Ensembl chrNW_004936591:3,998,340...4,001,830
JBrowse link
G Gclc glutamate-cysteine ligase catalytic subunit ISO RGD PMID:20054150 RGD:8547898 NCBI chrNW_004936476:7,371,270...7,418,756
Ensembl chrNW_004936476:7,371,149...7,418,958
JBrowse link
G Gja1 gap junction protein alpha 1 ISO RGD PMID:10631100 RGD:7207855 NCBI chrNW_004936658:3,920,043...3,932,987
Ensembl chrNW_004936658:3,920,043...3,932,987
JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 ISO mechanical stretching RGD PMID:26880260 RGD:13504840 NCBI chrNW_004936636:617,376...640,424
Ensembl chrNW_004936636:617,356...640,932
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO RGD PMID:20042609 RGD:7242068 NCBI chrNW_004936536:6,730,070...6,893,818
Ensembl chrNW_004936536:6,730,062...6,894,303
JBrowse link
G Habp4 hyaluronan binding protein 4 involved_in ISO PMID:15862299 UniProt PMID:15862299 RGD:8553316 NCBI chrNW_004936487:402,701...424,399 JBrowse link
G Hdac3 histone deacetylase 3 ISO RGD PMID:19261284 RGD:9590196 NCBI chrNW_004936504:12,530,546...12,546,556
Ensembl chrNW_004936504:12,530,528...12,546,556
JBrowse link
G Hdac4 histone deacetylase 4 ISO RGD PMID:19261284 RGD:9590196 NCBI chrNW_004936745:1,730,743...1,942,071
Ensembl chrNW_004936745:1,730,694...1,942,074
JBrowse link
G Hdac7 histone deacetylase 7 ISO RGD PMID:19261284 RGD:9590196 NCBI chrNW_004936512:5,680,564...5,701,182
Ensembl chrNW_004936512:5,682,490...5,697,869
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:15183444 RGD:9068913 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157
JBrowse link
G Igf1r insulin like growth factor 1 receptor ISO RGD PMID:21854769 RGD:10046007 NCBI chrNW_004936483:4,563,995...4,860,231
Ensembl chrNW_004936483:4,564,512...4,852,925
JBrowse link
G Igf2 insulin like growth factor 2 ISO RGD PMID:20695079 RGD:5509947 NCBI chrNW_004936816:972,902...981,232
Ensembl chrNW_004936816:972,282...979,167
JBrowse link
G Il13 interleukin 13 ISO RGD PMID:18362439 RGD:2298568 NCBI chrNW_004936647:2,529,933...2,532,503
Ensembl chrNW_004936647:2,530,491...2,532,373
JBrowse link
G Il13ra2 interleukin 13 receptor subunit alpha 2 ISO RGD PMID:18362439 RGD:2298568 NCBI chrNW_004936499:860,179...883,884
Ensembl chrNW_004936499:863,599...883,855
JBrowse link
G Il18 interleukin 18 ISO RGD PMID:18320471 RGD:4889461 NCBI chrNW_004936612:2,306,963...2,325,086
Ensembl chrNW_004936612:2,306,875...2,325,189
JBrowse link
G Il1b interleukin 1 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936783:1,251,678...1,256,807
Ensembl chrNW_004936783:1,252,158...1,257,165
JBrowse link
G Il1rl1 interleukin 1 receptor like 1 ISO RGD PMID:17492053 RGD:40813740 NCBI chrNW_004936713:1,020,969...1,035,012
Ensembl chrNW_004936713:1,021,044...1,035,039
JBrowse link
G Il33 interleukin 33 ISO RGD PMID:17492053 RGD:40813740 NCBI chrNW_004936539:763,755...791,461
Ensembl chrNW_004936539:623,248...791,470
JBrowse link
G Irf1 interferon regulatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936647:2,686,247...2,693,633
Ensembl chrNW_004936647:2,686,414...2,693,636
JBrowse link
G Itga2 integrin subunit alpha 2 ISO RGD PMID:12856576 RGD:1582308 NCBI chrNW_004936480:14,320,292...14,417,828
Ensembl chrNW_004936480:14,320,692...14,417,786
JBrowse link
G Itgb1 integrin subunit beta 1 ISO cyclic uniaxial tensile strain RGD PMID:19720043 RGD:2325327 NCBI chrNW_004936574:1,465,981...1,495,717
Ensembl chrNW_004936574:1,465,897...1,495,762
JBrowse link
G Itgb3 integrin subunit beta 3 ISO RGD PMID:12856576 RGD:1582308 NCBI chrNW_004936541:2,822,789...2,871,069
Ensembl chrNW_004936541:2,815,738...2,871,035
JBrowse link
G Kcnd2 potassium voltage-gated channel subfamily D member 2 ISO RGD PMID:17293496 RGD:7247436 NCBI chrNW_004936605:4,370,222...4,828,972
Ensembl chrNW_004936605:4,372,671...4,825,423
JBrowse link
G Kcnj2 potassium inwardly rectifying channel subfamily J member 2 ISO RGD PMID:17293496 RGD:7247436 NCBI chrNW_004936655:3,447,026...3,459,569
Ensembl chrNW_004936655:3,447,321...3,458,312
JBrowse link
G Kcnj4 potassium inwardly rectifying channel subfamily J member 4 ISO RGD PMID:17293496 RGD:7247436 NCBI chrNW_004936492:2,865,803...2,867,657
Ensembl chrNW_004936492:2,865,879...2,867,201
JBrowse link
G Kcnk4 potassium two pore domain channel subfamily K member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:4,910,783...4,917,355
Ensembl chrNW_004936599:4,910,723...4,918,229
JBrowse link
G LOC101957084 plectin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:8,194,124...8,252,139
Ensembl chrNW_004936470:8,216,205...8,250,978
JBrowse link
G LOC101967032 cytochrome b-245 light chain ISO RGD PMID:16685209 RGD:2317865 NCBI chrNW_004936641:1,036,967...1,044,954
Ensembl chrNW_004936641:1,036,967...1,044,991
JBrowse link
G Ltbp1 latent transforming growth factor beta binding protein 1 ISO RGD PMID:9607192 RGD:10412058 NCBI chrNW_004936493:253,390...640,140
Ensembl chrNW_004936493:253,216...640,140
JBrowse link
G Ltbr lymphotoxin beta receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936709:1,362,846...1,369,287
Ensembl chrNW_004936709:1,362,840...1,369,365
JBrowse link
G Mag myelin associated glycoprotein ISO RGD PMID:16140204 RGD:9685293 NCBI chrNW_004936570:989,743...1,004,820 JBrowse link
G Map2k4 mitogen-activated protein kinase kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:4,762,327...4,828,433
Ensembl chrNW_004936595:4,727,108...4,830,662
JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:11,082,811...11,156,691
Ensembl chrNW_004936480:11,083,605...11,156,691
JBrowse link
G Map3k14 mitogen-activated protein kinase kinase kinase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:1,548,892...1,591,770
Ensembl chrNW_004936541:1,548,875...1,591,833
JBrowse link
G Map3k2 mitogen-activated protein kinase kinase kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:43,880,816...43,958,556
Ensembl chrNW_004936469:43,880,468...43,958,556
JBrowse link
G Mapk3 mitogen-activated protein kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:12,342,670...12,390,650
Ensembl chrNW_004936501:12,384,804...12,392,180
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936728:1,775,746...1,893,895
Ensembl chrNW_004936728:1,775,641...1,893,907
JBrowse link
G Mkx mohawk homeobox ISO RGD PMID:27370800 RGD:40924660 NCBI chrNW_004936613:2,019,815...2,083,724
Ensembl chrNW_004936613:2,019,783...2,084,267
JBrowse link
G Mmp7 matrix metallopeptidase 7 ISO RGD PMID:20054150 RGD:8547898 NCBI chrNW_004936551:5,388,456...5,395,071
Ensembl chrNW_004936551:5,388,459...5,395,071
JBrowse link
G Mtpn myotrophin ISO RGD PMID:12031792 RGD:1581046 NCBI chrNW_004936592:644,618...679,615
Ensembl chrNW_004936592:644,430...679,800
JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:27,672,237...27,676,339
Ensembl chrNW_004936473:27,671,797...27,676,372
JBrowse link
G Myh9 myosin heavy chain 9 ISO RGD PMID:8888698 RGD:11533927 NCBI chrNW_004936492:4,384,215...4,466,229
Ensembl chrNW_004936492:4,384,215...4,466,262
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:733,760...850,563
Ensembl chrNW_004936520:733,668...829,435
JBrowse link
G Nos1 nitric oxide synthase 1 ISO RGD PMID:23619128 RGD:7257608 NCBI chrNW_004936558:5,162,471...5,302,488
Ensembl chrNW_004936558:5,233,459...5,301,414
JBrowse link
G Nos3 nitric oxide synthase 3 ISO RGD PMID:19673940 RGD:8693631 NCBI chrNW_004936527:6,427,147...6,445,770
Ensembl chrNW_004936527:6,427,093...6,446,534
JBrowse link
G Nppa natriuretic peptide A ISO RGD PMID:23617620 RGD:7297055 NCBI chrNW_004936474:671,362...673,610 JBrowse link
G Nppb natriuretic peptide B ISO RGD PMID:21812548 PMID:23617620 RGD:5685655 RGD:7297055 NCBI chrNW_004936474:683,325...684,662
Ensembl chrNW_004936474:683,325...684,665
JBrowse link
G Pax2 paired box 2 involved_in ISO (MGI:3707943|PMID:17164400) UniProt PMID:17164400 MGI:3707943 NCBI chrNW_004936600:4,850,594...4,939,010
Ensembl chrNW_004936600:4,850,552...4,928,214
JBrowse link
G Pde2a phosphodiesterase 2A involved_in ISO (MGI:5294515|PMID:21571906) UniProt PMID:21571906 MGI:5294515 NCBI chrNW_004936498:1,856,256...1,944,405
Ensembl chrNW_004936498:1,856,144...1,944,412
JBrowse link
G Pdgfb platelet derived growth factor subunit B ISO RGD PMID:7653578 RGD:10449502 NCBI chrNW_004936492:2,353,840...2,368,573
Ensembl chrNW_004936492:2,353,841...2,368,573
JBrowse link
G Phactr1 phosphatase and actin regulator 1 ISO RGD PMID:26098115 RGD:11053274 NCBI chrNW_004936534:42,354...323,735
Ensembl chrNW_004936534:42,433...536,171
JBrowse link
G Ptger4 prostaglandin E receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:1,903,636...1,916,746
Ensembl chrNW_004936518:1,903,725...1,916,746
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:21051526 RGD:5135055 NCBI chrNW_004936481:3,821,564...3,828,086 JBrowse link
G Ptpn11 protein tyrosine phosphatase non-receptor type 11 ISO RGD PMID:18757826 RGD:12743581 NCBI chrNW_004936668:2,602,261...2,687,903
Ensembl chrNW_004936668:2,628,706...2,682,448
JBrowse link
G Rac1 Rac family small GTPase 1 ISO RGD PMID:12105187 RGD:1299247 NCBI chrNW_004936750:107,689...122,679
Ensembl chrNW_004936750:107,689...122,676
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936671:1,064,937...1,232,985
Ensembl chrNW_004936671:1,051,742...1,093,021
JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (MGI:5294512|PMID:21625049) UniProt PMID:21625049 MGI:5294512 NCBI chrNW_004936470:7,966,096...7,972,379 JBrowse link
G Serpine1 serpin family E member 1 ISO biaxial cyclic stretch RGD PMID:20054150 RGD:8547898 NCBI chrNW_004936543:1,032,543...1,040,956
Ensembl chrNW_004936543:1,032,794...1,039,123
JBrowse link
G Sftpb surfactant protein B ISO RGD PMID:12600831 RGD:4143475 NCBI chrNW_004936712:1,614,979...1,621,207
Ensembl chrNW_004936712:1,614,979...1,622,466
JBrowse link
G Sftpc surfactant protein C ISO RGD PMID:12600831 RGD:4143475 NCBI chrNW_004936555:5,966,610...5,982,083
Ensembl chrNW_004936555:5,979,417...5,982,011
JBrowse link
G Slc2a1 solute carrier family 2 member 1 ISO RGD PMID:19918242 RGD:12879501 NCBI chrNW_004936474:24,205,878...24,236,611
Ensembl chrNW_004936474:24,206,644...24,236,713
JBrowse link
G Slc38a2 solute carrier family 38 member 2 ISO RGD PMID:15288886 RGD:9999216 NCBI chrNW_004936512:4,543,845...4,557,118
Ensembl chrNW_004936512:4,543,820...4,557,142
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936655:1,849,044...1,852,648
Ensembl chrNW_004936655:1,847,272...1,852,705
JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO RGD PMID:19012730 PMID:24120154 RGD:11073676 RGD:8662390 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
JBrowse link
G Tlr3 toll like receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:3,370,766...3,388,125
Ensembl chrNW_004936554:3,369,469...3,385,907
JBrowse link
G Tlr4 toll like receptor 4 involved_in ISO
IEA
RGD
Ensembl
PMID:20202224 GO_REF:0000107 RGD:4144075 NCBI chrNW_004936487:6,519,140...6,532,018
Ensembl chrNW_004936487:6,518,441...6,533,095
JBrowse link
G Tlr5 toll like receptor 5 involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chrNW_004936526:383,490...387,007
Ensembl chrNW_004936526:383,418...401,552
JBrowse link
G Tlr7 toll like receptor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:2,593,544...2,610,972
Ensembl chrNW_004936470:2,607,508...2,610,675
JBrowse link
G Tlr8 toll like receptor 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:2,638,020...2,642,201
Ensembl chrNW_004936470:2,638,014...2,641,133
JBrowse link
G Tmem150c transmembrane protein 150C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936738:2,006,254...2,022,906
Ensembl chrNW_004936738:1,956,488...2,022,899
JBrowse link
G Tmem87a transmembrane protein 87A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:5,517,362...5,578,290
Ensembl chrNW_004936471:5,516,332...5,578,290
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936709:1,407,327...1,421,448
Ensembl chrNW_004936709:1,407,278...1,421,921
JBrowse link
G Tnfrsf8 TNF receptor superfamily member 8 involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chrNW_004936474:814,510...889,851 JBrowse link
G Tnfsf14 TNF superfamily member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:3,976,492...3,979,825
Ensembl chrNW_004936588:3,976,492...3,979,825
JBrowse link
G Vegfa vascular endothelial growth factor A ISO RGD PMID:19012730 RGD:8662390 NCBI chrNW_004936476:16,245,134...16,261,180
Ensembl chrNW_004936476:16,247,100...16,260,673
JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5705446|PMID:25959411) MGI
Ensembl
PMID:25959411 GO_REF:0000107 MGI:5705446 NCBI chrNW_004936498:4,909,041...4,927,482
Ensembl chrNW_004936498:4,908,978...4,927,165
JBrowse link
cellular response to methionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmt2 base methyltransferase of 25S rRNA 2 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936589:5,578,566...5,657,093
Ensembl chrNW_004936589:5,578,519...5,659,400
JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:1201245 RGD:6893692 NCBI chrNW_004936484:16,087,924...16,180,089
Ensembl chrNW_004936484:16,087,923...16,180,148
JBrowse link
G Prmt1 protein arginine methyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:3,492,032...3,502,738
Ensembl chrNW_004936664:3,491,920...3,504,667
JBrowse link
cellular response to nitrogen starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936564:2,759,085...2,885,394
Ensembl chrNW_004936564:2,758,598...2,885,420
JBrowse link
G Atg7 autophagy related 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936602:1,938,720...2,179,239
Ensembl chrNW_004936602:1,935,507...2,179,256
JBrowse link
G Becn1 beclin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936490:17,518,100...17,531,126
Ensembl chrNW_004936490:17,517,751...17,531,151
JBrowse link
G Becn2 beclin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936526:8,532,991...8,534,271
Ensembl chrNW_004936526:8,533,009...8,534,271
JBrowse link
G Gabarap GABA type A receptor-associated protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936595:534,042...536,289
Ensembl chrNW_004936595:533,977...536,271
JBrowse link
G Gabarapl1 GABA type A receptor associated protein like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936902:364,158...372,888
Ensembl chrNW_004936902:362,282...373,459
JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:24,238,262...24,249,249
Ensembl chrNW_004936475:24,238,209...24,249,557
JBrowse link
G LOC101964795 microtubule-associated proteins 1A/1B light chain 3B-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936706:2,345,274...2,345,776 JBrowse link
G Map1lc3a microtubule associated protein 1 light chain 3 alpha involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936561:6,104,748...6,106,348
Ensembl chrNW_004936561:6,104,742...6,106,699
JBrowse link
G Map1lc3c microtubule associated protein 1 light chain 3 gamma involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936526:8,492,840...8,497,028
Ensembl chrNW_004936526:8,492,840...8,496,744
JBrowse link
cellular response to nutrient term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat2 acetyl-CoA acetyltransferase 2 ISO N-acetylcysteine RGD PMID:12563020 RGD:1598705 NCBI chrNW_004936489:11,255,871...11,273,848
Ensembl chrNW_004936489:11,255,871...11,283,216
JBrowse link
G Ccne1 cyclin E1 ISO RGD PMID:17979132 RGD:2289272 NCBI chrNW_004936570:5,536,817...5,547,880
Ensembl chrNW_004936570:5,536,672...5,548,008
JBrowse link
G Cdkn2b cyclin dependent kinase inhibitor 2B involved_in ISO (PMID:17597576) BHF-UCL PMID:17597576 NCBI chrNW_004936652:3,576,975...3,582,790
Ensembl chrNW_004936652:3,538,986...3,581,159
JBrowse link
G Csnk1a1 casein kinase 1 alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:5,351,354...5,394,856
Ensembl chrNW_004936504:5,351,029...5,396,034
JBrowse link
G Dbi diazepam binding inhibitor, acyl-CoA binding protein ISO RGD PMID:15825833 RGD:2316268 NCBI chrNW_004936469:50,981,198...50,986,224
Ensembl chrNW_004936469:50,980,595...50,986,506
JBrowse link
G Hmox1 heme oxygenase 1 ISO RGD PMID:15531134 RGD:1582714 NCBI chrNW_004936492:5,042,353...5,049,216
Ensembl chrNW_004936492:5,042,330...5,049,311
JBrowse link
G LOC101977127 cyclin-dependent kinase inhibitor 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936652:3,539,004...3,545,321 JBrowse link
G Lpl lipoprotein lipase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:4,084,099...4,108,219
Ensembl chrNW_004936555:4,084,099...4,108,365
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:158,376...282,310
Ensembl chrNW_004936474:157,590...282,342
JBrowse link
G Pdk2 pyruvate dehydrogenase kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:11,534,412...11,549,128
Ensembl chrNW_004936490:11,534,243...11,549,642
JBrowse link
G Pld1 phospholipase D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936593:844,634...1,049,478
Ensembl chrNW_004936593:930,637...1,046,821
JBrowse link
G Prdm4 PR/SET domain 4 ISO fetal calf serum RGD PMID:10485890 RGD:633619 NCBI chrNW_004936492:7,392,072...7,417,478
Ensembl chrNW_004936492:7,396,561...7,417,482
JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:3,441,046...3,492,917
Ensembl chrNW_004936490:3,441,055...3,492,917
JBrowse link
G Tnks tankyrase ISO RGD PMID:25876076 RGD:13628743 NCBI chrNW_004936573:788,909...993,453
Ensembl chrNW_004936573:794,184...994,247
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (MGI:4442277|PMID:20348926) UniProt PMID:20348926 MGI:4442277 NCBI chrNW_004936657:2,891,171...2,895,409
Ensembl chrNW_004936657:2,891,907...2,896,174
JBrowse link
cellular response to nutrient levels term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 acts_upstream_of_or_within ISO (MGI:5693219|PMID:23624089) MGI PMID:23624089 MGI:5693219 NCBI chrNW_004936528:1,608,782...1,682,873
Ensembl chrNW_004936528:1,608,757...1,682,975
JBrowse link
G Cd68 CD68 molecule involved_in ISO (MGI:6274946|PMID:16157452) ARUK-UCL PMID:16157452 MGI:6274946 NCBI chrNW_004936595:858,289...861,131 JBrowse link
G Crebbp CREB binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936694:552,447...663,237
Ensembl chrNW_004936694:553,753...663,617
JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:5,548,526...5,567,220
Ensembl chrNW_004936578:5,548,500...5,567,339
JBrowse link
G Ep300 E1A binding protein p300 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:696,982...778,132
Ensembl chrNW_004936492:696,960...778,138
JBrowse link
G Fam107a family with sequence similarity 107 member A involved_in ISO (MGI:6162291|PMID:21969592) UniProt PMID:21969592 MGI:6162291 NCBI chrNW_004936473:2,438,995...2,483,746
Ensembl chrNW_004936473:2,438,626...2,484,071
JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO RGD PMID:20643106 RGD:4145376 NCBI chrNW_004936659:616,570...627,172
Ensembl chrNW_004936659:616,752...627,174
JBrowse link
G Il6 interleukin 6 ISO RGD PMID:23079940 RGD:11062063 NCBI chrNW_004936549:7,015,595...7,016,246 JBrowse link
G Kcnb1 potassium voltage-gated channel subfamily B member 1 involved_in ISO PMID:19077057 UniProt PMID:19077057 RGD:10047372 NCBI chrNW_004936514:4,827,156...4,902,271
Ensembl chrNW_004936514:4,827,127...4,900,707
JBrowse link
G Kcnj11 potassium inwardly rectifying channel subfamily J member 11 acts_upstream_of_or_within ISO (MGI:5693219|PMID:23624089) MGI PMID:23624089 MGI:5693219 NCBI chrNW_004936528:1,685,015...1,688,220
Ensembl chrNW_004936528:1,685,924...1,687,096
JBrowse link
G Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:1,446,794...1,459,590
Ensembl chrNW_004936498:1,442,754...1,459,673
JBrowse link
G Lcn2 lipocalin 2 ISO serum deprivation RGD PMID:17356516 RGD:2303047 NCBI chrNW_004936487:15,721,752...15,725,396
Ensembl chrNW_004936487:15,721,684...15,728,221
JBrowse link
G LOC101966958 GATOR complex protein WDR59 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:23,754,525...23,803,942
Ensembl chrNW_004936475:23,726,314...23,803,854
JBrowse link
G LOC101973983 5'-AMP-activated protein kinase subunit beta-2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936953:77,671...93,383
Ensembl chrNW_004936953:77,688...93,374
JBrowse link
G Mios meiosis regulator for oocyte development involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936585:2,296,713...2,331,737
Ensembl chrNW_004936585:2,296,830...2,331,601
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:158,376...282,310
Ensembl chrNW_004936474:157,590...282,342
JBrowse link
G Otud3 OTU deubiquitinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:5,994,019...6,010,101
Ensembl chrNW_004936474:5,994,076...6,011,799
JBrowse link
G Ppard peroxisome proliferator activated receptor delta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:23,799,285...23,886,606
Ensembl chrNW_004936476:23,811,641...23,828,176
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:1,817,051...1,843,376
Ensembl chrNW_004936518:1,804,969...1,843,380
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:4,872,360...4,939,873
Ensembl chrNW_004936522:4,875,046...4,939,879
JBrowse link
G Prkab1 protein kinase AMP-activated non-catalytic subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936668:1,153,791...1,165,469
Ensembl chrNW_004936668:1,152,929...1,165,576
JBrowse link
G Prkag1 protein kinase AMP-activated non-catalytic subunit gamma 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:6,804,571...6,819,096
Ensembl chrNW_004936512:6,804,571...6,819,077
JBrowse link
G Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:1,258,678...1,266,925
Ensembl chrNW_004936569:1,259,105...1,266,925
JBrowse link
G Rheb Ras homolog, mTORC1 binding involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:6,832,286...6,877,938
Ensembl chrNW_004936527:6,832,169...6,878,164
JBrowse link
G Rptor regulatory associated protein of MTOR complex 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:4,427,225...4,758,081
Ensembl chrNW_004936594:4,427,169...4,760,120
JBrowse link
G Rraga Ras related GTP binding A involved_in ISO (PMID:31601708), (PMID:31601764) UniProt PMID:31601708 PMID:31601764 NCBI chrNW_004936652:991,832...993,439 JBrowse link
G Rragc Ras related GTP binding C involved_in IEA Ensembl GO_REF:0000107
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936602:3,013,490...3,030,489
Ensembl chrNW_004936602:3,013,337...3,030,486
JBrowse link
G Seh1l SEH1 like nucleoporin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936626:2,538,655...2,562,468
Ensembl chrNW_004936626:2,540,710...2,562,595
JBrowse link
G Txn2 thioredoxin 2 ISO Choline-deprived diet. RGD PMID:18578693 RGD:2306156 NCBI chrNW_004936492:4,310,394...4,320,714
Ensembl chrNW_004936492:4,311,287...4,321,763
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in ISO (MGI:5285135|PMID:21258367) UniProt PMID:21258367 MGI:5285135 NCBI chrNW_004936660:2,160,394...2,188,848
Ensembl chrNW_004936660:2,163,844...2,187,080
JBrowse link
G Wdr24 WD repeat domain 24 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:321,877...326,984
Ensembl chrNW_004936501:321,924...327,253
JBrowse link
cellular response to oxygen-glucose deprivation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2a activin A receptor type 2A ISO RGD PMID:27769861 RGD:329853763 NCBI chrNW_004936469:29,195,329...29,273,237
Ensembl chrNW_004936469:29,194,908...29,273,196
JBrowse link
G Becn1 beclin 1 ISO protein:increased expression:neuronal PC12 cells (rat) RGD PMID:27769861 RGD:329853763 NCBI chrNW_004936490:17,518,100...17,531,126
Ensembl chrNW_004936490:17,517,751...17,531,151
JBrowse link
G Inhba inhibin subunit beta A ISO protein:increased expression:neuronal PC12 cells (rat) RGD PMID:27769861 RGD:329853763 NCBI chrNW_004936478:16,878,725...16,884,065 JBrowse link
G Map1lc3a microtubule associated protein 1 light chain 3 alpha ISO protein:increased expression:neuronal PC12 cells (rat) RGD PMID:27769861 RGD:329853763 NCBI chrNW_004936561:6,104,748...6,106,348
Ensembl chrNW_004936561:6,104,742...6,106,699
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO protein:increased expression:neuronal PC12 cells (rat) RGD PMID:27769861 RGD:329853763 NCBI chrNW_004936728:1,775,746...1,893,895
Ensembl chrNW_004936728:1,775,641...1,893,907
JBrowse link
G Oaz1 ornithine decarboxylase antizyme 1 ISO RGD PMID:19531214 RGD:401851038 NCBI chrNW_004936588:1,356,769...1,361,037
Ensembl chrNW_004936588:1,356,769...1,361,037
JBrowse link
cellular response to phosphate starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5510279|PMID:23863468) MGI
Ensembl
PMID:23863468 GO_REF:0000107 MGI:5510279 NCBI chrNW_004936619:3,847,059...3,883,866
Ensembl chrNW_004936619:3,876,299...3,882,747
JBrowse link
G Slc34a1 solute carrier family 34 member 1 involved_in ISO PMID:9058191 UniProt PMID:9058191 RGD:152025535 NCBI chrNW_004936597:1,667,700...1,684,533
Ensembl chrNW_004936597:1,667,569...1,684,539
JBrowse link
G Xpr1 xenotropic and polytropic retrovirus receptor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936481:8,462,714...8,601,824
Ensembl chrNW_004936481:8,462,714...8,602,185
JBrowse link
cellular response to potassium ion starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:17428807 RGD:2290488 NCBI chrNW_004936522:3,034,364...3,037,632
Ensembl chrNW_004936522:3,035,346...3,036,350
JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3851650|PMID:19458124) MGI
Ensembl
PMID:19458124 GO_REF:0000107 MGI:3851650 NCBI chrNW_004936530:361,872...367,005
Ensembl chrNW_004936530:361,872...367,005
JBrowse link
G Slc38a3 solute carrier family 38 member 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3851650|PMID:19458124) MGI
Ensembl
PMID:19458124 GO_REF:0000107 MGI:3851650 NCBI chrNW_004936529:1,749,919...1,765,885
Ensembl chrNW_004936529:1,749,853...1,768,476
JBrowse link
cellular response to starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ambra1 autophagy and beclin 1 regulator 1 ISO RGD PMID:25117440 RGD:11552604 NCBI chrNW_004936562:2,493,823...2,676,868
Ensembl chrNW_004936562:2,493,774...2,676,912
JBrowse link
G Atg14 autophagy related 14 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936495:155,709...195,860
Ensembl chrNW_004936495:154,593...195,917
JBrowse link
G Atg4b autophagy related 4B cysteine peptidase involved_in ISO (MGI:5630037|PMID:25578879) ParkinsonsUK-UCL PMID:25578879 MGI:5630037 NCBI chrNW_004936745:291,311...308,469
Ensembl chrNW_004936745:292,746...307,746
JBrowse link
G Atg5 autophagy related 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5494529|PMID:22496425) MGI
Ensembl
PMID:22496425 GO_REF:0000107 MGI:5494529 NCBI chrNW_004936564:2,759,085...2,885,394
Ensembl chrNW_004936564:2,758,598...2,885,420
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5494529|PMID:22496425) MGI
Ensembl
PMID:22496425 GO_REF:0000107 MGI:5494529 NCBI chrNW_004936602:1,938,720...2,179,239
Ensembl chrNW_004936602:1,935,507...2,179,256
JBrowse link
G Bmf Bcl2 modifying factor involved_in ISO (MGI:5490676|PMID:23629966) CAFA PMID:23629966 MGI:5490676 NCBI chrNW_004936471:3,573,437...3,594,438
Ensembl chrNW_004936471:3,577,221...3,594,981
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936726:1,543,263...1,711,422
Ensembl chrNW_004936726:1,543,245...1,704,541
JBrowse link
G Cadps2 calcium dependent secretion activator 2 acts_upstream_of_or_within ISO (MGI:5468191|PMID:23260145) MGI PMID:23260145 MGI:5468191 NCBI chrNW_004936605:2,505,064...3,012,322
Ensembl chrNW_004936605:2,505,231...3,011,468
JBrowse link
G Cartpt CART prepropeptide involved_in IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936549:4,717,337...4,719,523
Ensembl chrNW_004936549:4,717,771...4,719,395
JBrowse link
G Cav1 caveolin 1 involved_in ISO (PMID:15657086) BHF-UCL PMID:15657086 NCBI chrNW_004936589:2,504,235...2,536,778
Ensembl chrNW_004936589:2,504,224...2,537,170
JBrowse link
G Clec16a C-type lectin domain containing 16A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:9,089,478...9,264,563
Ensembl chrNW_004936530:9,089,476...9,264,592
JBrowse link
G Ctsl cathepsin L ISO serum and potassium deprivation RGD PMID:16176344 RGD:2315590 NCBI chrNW_004936680:3,047,355...3,050,640 JBrowse link
G Dnajc15 DnaJ heat shock protein family (Hsp40) member C15 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5529421|PMID:23530063) MGI
Ensembl
PMID:23530063 GO_REF:0000107 MGI:5529421 NCBI chrNW_004936747:800,070...864,299
Ensembl chrNW_004936747:802,218...864,299
JBrowse link
G Dsc2 desmocollin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5468191|PMID:23260145) MGI
Ensembl
PMID:23260145 GO_REF:0000107 MGI:5468191 NCBI chrNW_004936682:2,057,331...2,091,034
Ensembl chrNW_004936682:2,057,190...2,164,429
JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23918802) MGI
Ensembl
PMID:23918802 GO_REF:0000107 NCBI chrNW_004936727:1,648,451...1,663,294
Ensembl chrNW_004936727:1,648,448...1,663,455
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 acts_upstream_of_or_within ISO (MGI:3589702|PMID:15937339) MGI PMID:15937339 MGI:3589702 NCBI chrNW_004936471:3,423,792...3,527,089
Ensembl chrNW_004936471:3,423,813...3,526,913
JBrowse link
G Elapor1 endosome-lysosome associated apoptosis and autophagy regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936704:653,434...736,660
Ensembl chrNW_004936704:653,403...739,151
JBrowse link
G Fads1 fatty acid desaturase 1 involved_in ISO (PMID:10601301) UniProt PMID:10601301 NCBI chrNW_004936581:1,312,199...1,327,046
Ensembl chrNW_004936581:1,312,183...1,327,998
JBrowse link
G Fbxo22 F-box protein 22 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3840749|PMID:19319192) MGI
Ensembl
PMID:19319192 GO_REF:0000107 MGI:3840749 NCBI chrNW_004936471:36,232,749...36,255,772
Ensembl chrNW_004936471:36,232,583...36,255,672
JBrowse link
G Flcn folliculin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936741:881,150...901,296
Ensembl chrNW_004936741:880,736...901,468
JBrowse link
G Fnip1 folliculin interacting protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
ISS
(MGI:5436190|PMID:22608497) MGI
Ensembl
UniProt
PMID:22608497 GO_REF:0000024 GO_REF:0000107 MGI:5436190 NCBI chrNW_004936647:3,329,097...3,428,170
Ensembl chrNW_004936647:3,329,103...3,428,242
JBrowse link
G Foxa3 forkhead box A3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2153289|PMID:11546810) MGI
Ensembl
PMID:11546810 GO_REF:0000107 MGI:2153289 NCBI chrNW_004936706:2,196,530...2,202,924
Ensembl chrNW_004936706:2,196,468...2,203,113
JBrowse link
G Foxo1 forkhead box O1 involved_in IEA
ISS
(PMID:22510882) Ensembl
UniProt
PMID:22510882 GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936565:5,210,014...5,299,213
Ensembl chrNW_004936565:5,210,014...5,302,436
JBrowse link
G Gas2l1 growth arrest specific 2 like 1 involved_in ISO (MGI:3052497|PMID:12584248) UniProt PMID:12584248 MGI:3052497 NCBI chrNW_004936657:3,327,363...3,333,087
Ensembl chrNW_004936657:3,327,339...3,333,797
JBrowse link
G Gas6 growth arrest specific 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1861137|PMID:8336730) MGI
Ensembl
PMID:8336730 GO_REF:0000107 MGI:1861137 NCBI chrNW_004936472:27,116...57,158
Ensembl chrNW_004936472:32,123...54,028
JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:4,715,869...4,720,752
Ensembl chrNW_004936580:4,715,408...4,720,798
JBrowse link
G Gcgr glucagon receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5474727|PMID:23209793) ARUK-UCL
Ensembl
PMID:23209793 GO_REF:0000107 MGI:5474727 NCBI chrNW_004936594:5,347,789...5,351,852
Ensembl chrNW_004936594:5,343,740...5,351,923
JBrowse link
G Glul glutamate-ammonia ligase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5468191|PMID:23260145) MGI
Ensembl
PMID:23260145 GO_REF:0000107 MGI:5468191 NCBI chrNW_004936481:7,293,301...7,301,416
Ensembl chrNW_004936481:7,293,091...7,306,202
JBrowse link
G Inhbb inhibin subunit beta B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:50,186,036...50,191,455
Ensembl chrNW_004936469:50,186,036...50,191,461
JBrowse link
G Jmy junction mediating and regulatory protein, p53 cofactor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:7,074,644...7,163,531
Ensembl chrNW_004936549:7,074,970...7,155,490
JBrowse link
G Klf10 KLF transcription factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:40,980,487...40,986,880
Ensembl chrNW_004936470:40,980,487...40,986,885
JBrowse link
G Krt20 keratin 20 involved_in ISO (MGI:3759335|PMID:16608857) UniProt PMID:16608857 MGI:3759335
G Lamp2 lysosomal associated membrane protein 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936479:9,584,221...9,622,330
Ensembl chrNW_004936479:9,584,221...9,610,420
JBrowse link
G Lrrk2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936607:628,469...761,117
Ensembl chrNW_004936607:626,991...761,123
JBrowse link
G Map1lc3a microtubule associated protein 1 light chain 3 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:6,104,748...6,106,348
Ensembl chrNW_004936561:6,104,742...6,106,699
JBrowse link
G Map1lc3c microtubule associated protein 1 light chain 3 gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:8,492,840...8,497,028
Ensembl chrNW_004936526:8,492,840...8,496,744
JBrowse link
G Max MYC associated factor X ISO serum deprivation RGD PMID:10446908 RGD:2316822 NCBI chrNW_004936495:8,728,941...8,755,742
Ensembl chrNW_004936495:8,728,940...8,755,799
JBrowse link
G Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5474727|PMID:23209793) ARUK-UCL
Ensembl
PMID:23209793 GO_REF:0000107 MGI:5474727 NCBI chrNW_004936474:21,790,807...21,803,336
Ensembl chrNW_004936474:21,790,747...21,803,360
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:158,376...282,310
Ensembl chrNW_004936474:157,590...282,342
JBrowse link
G Myh13 myosin heavy chain 13 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3840749|PMID:19319192) MGI
Ensembl
PMID:19319192 GO_REF:0000107 MGI:3840749 NCBI chrNW_004936595:3,204,487...3,262,459
Ensembl chrNW_004936595:3,204,573...3,255,494
JBrowse link
G Myod1 myogenic differentiation 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3840749|PMID:19319192) MGI
Ensembl
PMID:19319192 GO_REF:0000107 MGI:3840749 NCBI chrNW_004936528:1,407,187...1,409,683
Ensembl chrNW_004936528:1,407,661...1,409,573
JBrowse link
G Nr1h3 nuclear receptor subfamily 1 group H member 3 ISO RGD PMID:33770194 RGD:401827922 NCBI chrNW_004936562:1,937,665...1,946,680
Ensembl chrNW_004936562:1,937,667...1,946,669
JBrowse link
G NUPR2 nuclear protein 2, transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 Ensembl chrNW_004936543:7,852,069...7,852,363 JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:6,271,339...6,300,202
Ensembl chrNW_004936522:6,272,507...6,299,917
JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936585:4,701,012...4,713,421
Ensembl chrNW_004936585:4,700,418...4,714,450
JBrowse link
G Pik3c2a phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha acts_upstream_of_or_within ISO (MGI:5565574|PMID:24098492) MGI PMID:24098492 MGI:5565574 NCBI chrNW_004936528:1,845,372...1,964,908
Ensembl chrNW_004936528:1,869,527...1,964,183
JBrowse link
G Pik3c2b phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5565574|PMID:24098492) MGI
Ensembl
PMID:24098492 GO_REF:0000107 MGI:5565574 NCBI chrNW_004936567:314,957...377,544
Ensembl chrNW_004936567:314,898...378,045
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase catalytic subunit type 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5565574|PMID:24098492) MGI
Ensembl
PMID:24098492 GO_REF:0000107 MGI:5565574 NCBI chrNW_004936517:4,009,938...4,145,518
Ensembl chrNW_004936517:4,033,247...4,145,422
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936629:3,672,445...3,725,645
Ensembl chrNW_004936629:3,672,460...3,725,626
JBrowse link
G Ppm1d protein phosphatase, Mg2+/Mn2+ dependent 1D ISO RGD PMID:23520533 RGD:8693590 NCBI chrNW_004936490:2,139,201...2,183,850
Ensembl chrNW_004936490:2,139,078...2,184,602
JBrowse link
G Ralb RAS like proto-oncogene B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:50,237,804...50,279,483
Ensembl chrNW_004936469:50,236,409...50,279,583
JBrowse link
G Ripor1 RHO family interacting cell polarization regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:17,952,297...17,968,029
Ensembl chrNW_004936475:17,952,092...17,971,085
JBrowse link
G Rnase4 ribonuclease A family member 4 acts_upstream_of_or_within ISO (MGI:5468191|PMID:23260145) MGI PMID:23260145 MGI:5468191 NCBI chrNW_004936880:41,940...42,988
Ensembl chrNW_004936880:34,289...43,209
JBrowse link
G Rptor regulatory associated protein of MTOR complex 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936594:4,427,225...4,758,081
Ensembl chrNW_004936594:4,427,169...4,760,120
JBrowse link
G Rraga Ras related GTP binding A involved_in ISO (MGI:5473730|PMID:23263183) UniProt PMID:23263183 MGI:5473730 NCBI chrNW_004936652:991,832...993,439 JBrowse link
G Rragb Ras related GTP binding B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936819:946,874...988,531
Ensembl chrNW_004936819:955,527...988,644
JBrowse link
G Rragc Ras related GTP binding C involved_in IEA TreeGrafter GO_REF:0000118
G Rragd Ras related GTP binding D involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936510:2,810,028...2,849,792
Ensembl chrNW_004936510:2,810,022...2,853,306
JBrowse link
G Sfrp1 secreted frizzled related protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936785:1,276,478...1,320,397
Ensembl chrNW_004936785:1,276,420...1,321,017
JBrowse link
G Sirt1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:10,296,097...10,316,673
Ensembl chrNW_004936521:10,296,097...10,322,215
JBrowse link
G Sphk1 sphingosine kinase 1 ISO RGD PMID:16959847 RGD:2311370 NCBI chrNW_004936594:1,482,830...1,489,337
Ensembl chrNW_004936594:1,486,111...1,489,188
JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 ISO serum-free culture RGD PMID:9729333 RGD:1600064 NCBI chrNW_004936634:758,231...798,809 JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936741:1,408,669...1,419,717
Ensembl chrNW_004936741:1,406,521...1,419,776
JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 involved_in ISO (PMID:25339898) ParkinsonsUK-UCL PMID:25339898 NCBI chrNW_004936492:115,923...174,614
Ensembl chrNW_004936492:115,821...174,775
JBrowse link
G Stk24 serine/threonine kinase 24 involved_in ISO (PMID:27807006) UniProt PMID:27807006 NCBI chrNW_004936472:11,788,439...11,888,703
Ensembl chrNW_004936472:11,833,646...11,888,705
JBrowse link
G Stk26 serine/threonine kinase 26 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936691:2,757,934...2,811,961
Ensembl chrNW_004936691:2,757,934...2,811,937
JBrowse link
G Tbc1d7 TBC1 domain family member 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:8,104...17,056
Ensembl chrNW_004936534:8,281...27,544
JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (MGI:5468191|PMID:23260145) MGI PMID:23260145 MGI:5468191 NCBI chrNW_004936486:3,473,877...3,660,565
Ensembl chrNW_004936486:3,473,843...3,660,576
JBrowse link
G Tfeb transcription factor EB involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:18,189,096...18,233,622
Ensembl chrNW_004936476:18,189,041...18,233,701
JBrowse link
G Tnrc6a trinucleotide repeat containing adaptor 6A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3510094|PMID:15494374) MGI
Ensembl
PMID:15494374 GO_REF:0000107 MGI:3510094 NCBI chrNW_004936501:9,016,844...9,192,946
Ensembl chrNW_004936501:9,045,546...9,193,281
JBrowse link
G Tsc1 TSC complex subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:19,331,183...19,386,841
Ensembl chrNW_004936487:19,331,194...19,386,892
JBrowse link
G Tsc2 TSC complex subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936694:1,958,152...1,993,373
Ensembl chrNW_004936694:1,958,154...1,993,363
JBrowse link
G Ttc5 tetratricopeptide repeat domain 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936877:504,406...520,295
Ensembl chrNW_004936877:501,743...520,316
JBrowse link
G Usp33 ubiquitin specific peptidase 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936571:4,537,461...4,600,238
Ensembl chrNW_004936571:4,537,405...4,588,570
JBrowse link
G Vps41 VPS41 subunit of HOPS complex involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936478:14,296,191...14,454,650
Ensembl chrNW_004936478:14,293,108...14,454,707
JBrowse link
G Wdr45 WD repeat domain 45 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936721:975,113...981,149
Ensembl chrNW_004936721:975,104...981,731
JBrowse link
G Wdr45b WD repeat domain 45B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936923:173,515...192,616
Ensembl chrNW_004936923:173,515...192,580
JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:7,782,836...7,812,142
Ensembl chrNW_004936541:7,783,322...7,812,054
JBrowse link
G Wipi2 WD repeat domain, phosphoinositide interacting 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936765:909,118...946,788
Ensembl chrNW_004936765:907,877...946,822
JBrowse link
G Wnt2b Wnt family member 2B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5468191|PMID:23260145) MGI
Ensembl
PMID:23260145 GO_REF:0000107 MGI:5468191 NCBI chrNW_004936690:1,077,538...1,094,005
Ensembl chrNW_004936690:1,079,227...1,097,041
JBrowse link
G Wnt4 Wnt family member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5468191|PMID:23260145) MGI
Ensembl
PMID:23260145 GO_REF:0000107 MGI:5468191 NCBI chrNW_004936474:7,623,462...7,635,416
Ensembl chrNW_004936474:7,623,463...7,635,664
JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5468191|PMID:23260145) MGI
Ensembl
PMID:23260145 GO_REF:0000107 MGI:5468191 NCBI chrNW_004936541:1,899,039...1,939,561
Ensembl chrNW_004936541:1,899,039...1,939,561
JBrowse link
G Wrn WRN RecQ like helicase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11420665) MGI
Ensembl
PMID:11420665 GO_REF:0000107 NCBI chrNW_004936792:862,659...1,005,065
Ensembl chrNW_004936792:862,383...1,005,755
JBrowse link
G Zfyve1 zinc finger FYVE-type containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:2,304,521...2,364,472
Ensembl chrNW_004936488:2,304,438...2,364,709
JBrowse link
cellular response to vitamin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting helicase 1 ISO RGD PMID:16771696 RGD:2326085 NCBI chrNW_004936490:3,001,445...3,139,538
Ensembl chrNW_004936490:3,003,484...3,137,479
JBrowse link
cellular response to vitamin A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ltc4s leukotriene C4 synthase ISO RGD PMID:12767051 RGD:724432 NCBI chrNW_004936739:975,494...978,426
Ensembl chrNW_004936739:975,493...978,482
JBrowse link
cellular response to vitamin B1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mdm2 MDM2 proto-oncogene ISO RGD PMID:15656374 RGD:2317394 NCBI chrNW_004936545:6,709,903...6,732,334 JBrowse link
cellular response to vitamin B3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sirt1 sirtuin 1 ISO RGD PMID:23555824 RGD:10047117 NCBI chrNW_004936521:10,296,097...10,316,673
Ensembl chrNW_004936521:10,296,097...10,322,215
JBrowse link
cellular response to vitamin D term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif 1 ISO RGD PMID:11108265 RGD:9681746 NCBI chrNW_004936640:959,405...967,305
Ensembl chrNW_004936640:959,417...968,842
JBrowse link
G Atp2b1 ATPase plasma membrane Ca2+ transporting 1 ISO RGD PMID:11277270 RGD:2317730 NCBI chrNW_004936507:6,525,302...6,631,003
Ensembl chrNW_004936507:6,523,199...6,630,606
JBrowse link
G Bglap bone gamma-carboxyglutamate protein ISO RGD PMID:3257212 PMID:6607920 RGD:2316174 RGD:6483560 NCBI chrNW_004936580:5,480,023...5,482,288
Ensembl chrNW_004936580:5,481,355...5,482,155
JBrowse link
G Casr calcium sensing receptor ISO 1,25-dihydroxycholecalciferol (calcitriol) RGD PMID:21940515 RGD:7205697 NCBI chrNW_004936536:8,574,064...8,599,446
Ensembl chrNW_004936536:8,574,064...8,599,454
JBrowse link
G Fes FES proto-oncogene, tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:16,123,938...16,135,044
Ensembl chrNW_004936483:16,123,779...16,135,044
JBrowse link
G Fgf23 fibroblast growth factor 23 ISO RGD PMID:23263654 RGD:10044209 NCBI chrNW_004936606:4,555,034...4,561,961
Ensembl chrNW_004936606:4,555,034...4,561,961
JBrowse link
G Fzd1 frizzled class receptor 1 ISO RGD PMID:1334084 RGD:61590 NCBI chrNW_004936621:2,899,183...2,903,427
Ensembl chrNW_004936621:2,900,995...2,902,947
JBrowse link
G Fzd2 frizzled class receptor 2 ISO RGD PMID:1334084 RGD:61590 NCBI chrNW_004936541:965,135...967,018
Ensembl chrNW_004936541:965,131...966,798
JBrowse link
G Gdap1 ganglioside induced differentiation associated protein 1 ISO RGD PMID:25449168 RGD:12738378 NCBI chrNW_004936648:2,981,802...2,999,161
Ensembl chrNW_004936648:2,981,546...3,014,430
JBrowse link
G Il15 interleukin 15 ISO RGD PMID:15637289 RGD:2311387 NCBI chrNW_004936535:6,344,348...6,358,803
Ensembl chrNW_004936535:6,344,395...6,350,197
JBrowse link
G Itgb1 integrin subunit beta 1 ISO calcitriol RGD PMID:20304064 RGD:2325261 NCBI chrNW_004936574:1,465,981...1,495,717
Ensembl chrNW_004936574:1,465,897...1,495,762
JBrowse link
G Kdm6a lysine demethylase 6A ISO RGD PMID:31907922 RGD:151665135 NCBI chrNW_004936502:10,980,303...11,196,711
Ensembl chrNW_004936502:10,980,118...11,196,163
JBrowse link
G LOC101957714 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial ISO RGD PMID:28104492 RGD:151665513 NCBI chrNW_004936514:1,467,460...1,480,185
Ensembl chrNW_004936514:1,467,261...1,480,185
JBrowse link
G Ltbp1 latent transforming growth factor beta binding protein 1 ISO RGD PMID:10025676 RGD:10412059 NCBI chrNW_004936493:253,390...640,140
Ensembl chrNW_004936493:253,216...640,140
JBrowse link
G Mmp1 matrix metallopeptidase 1 ISO RGD PMID:22064970 RGD:7207281 NCBI chrNW_004936551:5,167,909...5,175,149
Ensembl chrNW_004936551:5,168,044...5,174,857
JBrowse link
G Nos2 nitric oxide synthase 2 ISO RGD PMID:18534083 RGD:4891908 NCBI chrNW_004936538:4,052,277...4,097,051
Ensembl chrNW_004936538:4,052,448...4,097,051
JBrowse link
G Pdia3 protein disulfide isomerase family A member 3 ISO RGD PMID:15862831 RGD:9999173 NCBI chrNW_004936471:6,809,181...6,834,189
Ensembl chrNW_004936471:6,809,195...6,836,169
JBrowse link
G Penk proenkephalin ISO RGD PMID:8584038 RGD:10003035 NCBI chrNW_004936496:3,016,247...3,021,726
Ensembl chrNW_004936496:3,016,218...3,021,738
JBrowse link
G Phex phosphate regulating endopeptidase X-linked ISO RGD PMID:15337762 RGD:11556251 NCBI chrNW_004936624:2,124,479...2,312,847
Ensembl chrNW_004936624:2,126,253...2,312,847
JBrowse link
G Ptn pleiotrophin ISO RGD PMID:21153232 RGD:9831436 NCBI chrNW_004936592:1,706,979...1,806,345
Ensembl chrNW_004936592:1,707,693...1,730,617
JBrowse link
G Sfrp1 secreted frizzled related protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936785:1,276,478...1,320,397
Ensembl chrNW_004936785:1,276,420...1,321,017
JBrowse link
G Tnc tenascin C ISO RGD PMID:10502285 RGD:4889620 NCBI chrNW_004936487:4,172,263...4,256,780
Ensembl chrNW_004936487:4,172,886...4,233,126
JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 ISO RGD PMID:29331667 RGD:127284861 NCBI chrNW_004936476:18,577,825...18,583,675
Ensembl chrNW_004936476:18,574,381...18,583,647
JBrowse link
G Vdr vitamin D receptor ISO RGD PMID:9753201 RGD:8158092 NCBI chrNW_004936512:5,741,836...5,800,999
Ensembl chrNW_004936512:5,740,748...5,801,109
JBrowse link
cellular response to vitamin E term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col1a1 collagen type I alpha 1 chain ISO RGD PMID:23722449 RGD:8552711 NCBI chrNW_004936490:11,448,552...11,465,836
Ensembl chrNW_004936490:11,448,654...11,464,444
JBrowse link
G Col2a1 collagen type II alpha 1 chain ISO RGD PMID:23722449 RGD:8552711 NCBI chrNW_004936512:5,861,933...5,894,898
Ensembl chrNW_004936512:5,861,933...5,892,853
JBrowse link
G Pawr pro-apoptotic WT1 regulator ISO RGD PMID:10428045 RGD:9835341 NCBI chrNW_004936698:650,225...746,593
Ensembl chrNW_004936698:650,953...747,057
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma ISO RGD PMID:11752099 RGD:8553036 NCBI chrNW_004936602:1,230,907...1,368,588
Ensembl chrNW_004936602:1,230,907...1,304,743
JBrowse link
cellular response to vitamin K term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl5 C-C motif chemokine ligand 5 ISO menadione (K3) RGD PMID:19291322 RGD:4889997 NCBI chrNW_004936490:253,279...259,947
Ensembl chrNW_004936490:253,034...259,965
JBrowse link
G Gas6 growth arrest specific 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:27,116...57,158
Ensembl chrNW_004936472:32,123...54,028
JBrowse link
G Postn periostin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:31,644,778...31,677,572
Ensembl chrNW_004936472:31,644,778...31,677,572
JBrowse link
cellular response to water deprivation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp2 aquaporin 2 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:1328377|PMID:10191086) RGD
Ensembl
MGI
PMID:10191086 PMID:15196935 GO_REF:0000107 MGI:1328377 RGD:2313141 NCBI chrNW_004936512:7,628,677...7,633,344
Ensembl chrNW_004936512:7,628,495...7,634,107
JBrowse link
G Avpr1a arginine vasopressin receptor 1A ISO RGD PMID:11796498 RGD:70387 NCBI chrNW_004936545:1,788,995...1,795,842
Ensembl chrNW_004936545:1,786,571...1,794,709
JBrowse link
G Sipa1 signal-induced proliferation-associated 1 ISO RGD PMID:15196935 RGD:2313141 NCBI chrNW_004936599:3,813,350...3,825,319
Ensembl chrNW_004936599:3,813,596...3,822,170
JBrowse link
cellular response to zinc ion starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp5 acid phosphatase 5, tartrate resistant ISO RGD PMID:21893222 RGD:151667428 NCBI chrNW_004936659:1,598,252...1,642,615
Ensembl chrNW_004936659:1,598,177...1,600,262
JBrowse link
G Bglap bone gamma-carboxyglutamate protein ISO RGD PMID:21893222 RGD:151667428 NCBI chrNW_004936580:5,480,023...5,482,288
Ensembl chrNW_004936580:5,481,355...5,482,155
JBrowse link
G Ctnnb1 catenin beta 1 ISO RGD PMID:21893222 RGD:151667428 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293
JBrowse link
G Ctsk cathepsin K ISO RGD PMID:21893222 RGD:151667428 NCBI chrNW_004936580:1,022,762...1,038,020
Ensembl chrNW_004936580:1,022,762...1,034,984
JBrowse link
G Dlx5 distal-less homeobox 5 ISO RGD PMID:21893222 RGD:151667428 NCBI chrNW_004936585:3,462,063...3,466,641
Ensembl chrNW_004936585:3,461,944...3,466,641
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:21893222 RGD:151667428 NCBI chrNW_004936488:4,384,710...4,388,118
Ensembl chrNW_004936488:4,384,705...4,388,122
JBrowse link
G Igf1 insulin like growth factor 1 ISO RGD PMID:21893222 RGD:151667428 NCBI chrNW_004936492:11,709,623...11,784,028
Ensembl chrNW_004936492:11,709,222...11,778,351
JBrowse link
G Igf1r insulin like growth factor 1 receptor ISO RGD PMID:21893222 RGD:151667428 NCBI chrNW_004936483:4,563,995...4,860,231
Ensembl chrNW_004936483:4,564,512...4,852,925
JBrowse link
G Insr insulin receptor ISO RGD PMID:21893222 RGD:151667428 NCBI chrNW_004936588:4,345,306...4,453,380
Ensembl chrNW_004936588:4,345,306...4,453,668
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:21893222 RGD:151667428 NCBI chrNW_004936522:3,034,364...3,037,632
Ensembl chrNW_004936522:3,035,346...3,036,350
JBrowse link
G Mitf melanocyte inducing transcription factor ISO RGD PMID:21893222 RGD:151667428 NCBI chrNW_004936603:1,682,411...1,858,295
Ensembl chrNW_004936603:1,682,513...1,858,173
JBrowse link
G Runx2 RUNX family transcription factor 2 ISO RGD PMID:21893222 RGD:151667428 NCBI chrNW_004936476:14,695,965...14,818,246
Ensembl chrNW_004936476:14,695,965...14,905,157
JBrowse link
G Slc39a4 solute carrier family 39 member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3522410|PMID:15358787) MGI
Ensembl
PMID:15358787 GO_REF:0000107 MGI:3522410 NCBI chrNW_004936470:7,836,612...7,842,262
Ensembl chrNW_004936470:7,838,030...7,842,262
JBrowse link
G Slc39a5 solute carrier family 39 member 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3522410|PMID:15358787) MGI
Ensembl
PMID:15358787 GO_REF:0000107 MGI:3522410 NCBI chrNW_004936646:638,956...649,501
Ensembl chrNW_004936646:640,253...645,617
JBrowse link
G Sp1 Sp1 transcription factor ISO RGD PMID:21893222 RGD:151667428 NCBI chrNW_004936512:10,655,116...10,693,025
Ensembl chrNW_004936512:10,655,349...10,693,042
JBrowse link
G Sp7 Sp7 transcription factor ISO RGD PMID:21893222 RGD:151667428 NCBI chrNW_004936512:10,610,542...10,613,335
Ensembl chrNW_004936512:10,612,060...10,619,628
JBrowse link
G Tnfrsf11a TNF receptor superfamily member 11a ISO RGD PMID:21893222 RGD:151667428 NCBI chrNW_004936497:2,944,841...2,986,113
Ensembl chrNW_004936497:2,945,010...2,995,207
JBrowse link
DNA protection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta-synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:976,043...1,003,559
Ensembl chrNW_004936500:987,128...1,003,388
JBrowse link
G Dctpp1 dCTP pyrophosphatase 1 involved_in IEA Ensembl
TreeGrafter
UniProt
GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:12,880,745...12,884,240
Ensembl chrNW_004936501:12,879,241...12,884,287
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO RGD PMID:31644904 RGD:126925983 NCBI chrNW_004936728:706,499...843,447
Ensembl chrNW_004936728:761,804...844,690
JBrowse link
G Nudt1 nudix hydrolase 1 involved_in IEA Ensembl
TreeGrafter
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936823:7,104...22,083
Ensembl chrNW_004936823:7,099...18,677
JBrowse link
G Nudt15 nudix hydrolase 15 NOT|involved_in ISO
IEA
(PMID:26238318) UniProt
Ensembl
PMID:26238318 GO_REF:0000107 NCBI chrNW_004936565:1,380,981...1,389,908
Ensembl chrNW_004936565:1,381,655...1,389,048
JBrowse link
negative regulation of transcription from RNA polymerase II promoter by glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 involved_in ISO (MGI:5142372|PMID:11875061) BHF-UCL PMID:11875061 MGI:5142372 NCBI chrNW_004936620:2,966,341...2,969,349
Ensembl chrNW_004936620:2,966,341...2,969,349
JBrowse link
G Sik2 salt inducible kinase 2 involved_in ISO (MGI:5000207|PMID:21084751) MGI PMID:21084751 MGI:5000207 NCBI chrNW_004936612:2,691,729...2,810,975
Ensembl chrNW_004936612:2,691,524...2,810,981
JBrowse link
negative regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kank2 KN motif and ankyrin repeat domains 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936659:1,320,169...1,340,137
Ensembl chrNW_004936659:1,321,980...1,337,746
JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936590:3,813,916...3,817,642
Ensembl chrNW_004936590:3,813,888...3,817,642
JBrowse link
positive regulation of transcription by glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srf serum response factor ISO RGD PMID:20655308 RGD:5131625 NCBI chrNW_004936476:16,779,941...16,789,499
Ensembl chrNW_004936476:16,782,233...16,789,130
JBrowse link
positive regulation of transcription from RNA polymerase II promoter by galactose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncoa1 nuclear receptor coactivator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:7,368,393...7,605,754
Ensembl chrNW_004936493:7,368,462...7,465,615
JBrowse link
positive regulation of transcription from RNA polymerase II promoter by glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 involved_in ISO (MGI:5142372|PMID:11875061) BHF-UCL PMID:11875061 MGI:5142372 NCBI chrNW_004936620:2,966,341...2,969,349
Ensembl chrNW_004936620:2,966,341...2,969,349
JBrowse link
G Kat2b lysine acetyltransferase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:12,341,545...12,415,637
Ensembl chrNW_004936473:12,344,343...12,417,875
JBrowse link
G Mlx MAX dimerization protein MLX involved_in ISO (MGI:3040568|PMID:14742444) MGI PMID:14742444 MGI:3040568 NCBI chrNW_004936490:17,323,137...17,327,774
Ensembl chrNW_004936490:17,323,919...17,328,485
JBrowse link
G Mlxipl MLX interacting protein like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,839,105...2,856,997
Ensembl chrNW_004936543:2,839,105...2,857,002
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936762:99,335...137,833
Ensembl chrNW_004936762:99,293...137,874
JBrowse link
G Usf1 upstream transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936903:352,569...359,350
Ensembl chrNW_004936903:352,590...359,398
JBrowse link
G Usf2 upstream transcription factor 2, c-fos interacting involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936570:1,012,696...1,024,243
Ensembl chrNW_004936570:1,012,654...1,024,288
JBrowse link
positive regulation of translational initiation in response to starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:2149467|PMID:10655230)
(MGI:3589053|PMID:16121183)
UniProt PMID:10655230 PMID:16121183 MGI:2149467 MGI:3589053 NCBI chrNW_004936471:3,423,792...3,527,089
Ensembl chrNW_004936471:3,423,813...3,526,913
JBrowse link
positive regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101978323 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:1,899,686...1,904,104
Ensembl chrNW_004936646:1,900,259...1,904,104
JBrowse link
G Mn1 MN1 proto-oncogene, transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936657:2,024,302...2,066,196
Ensembl chrNW_004936657:2,024,350...2,065,263
JBrowse link
G Rxra retinoid X receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:2,735,111...2,763,060
Ensembl chrNW_004936669:2,738,448...2,763,070
JBrowse link
G Snw1 SNW domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:6,494,556...6,531,297
Ensembl chrNW_004936488:6,494,562...6,531,600
JBrowse link
G Vdr vitamin D receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:5,741,836...5,800,999
Ensembl chrNW_004936512:5,740,748...5,801,109
JBrowse link
regulation of cell growth by extracellular stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif26a kinesin family member 26A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936621:1,084,957...1,119,619
Ensembl chrNW_004936621:1,085,964...1,119,369
JBrowse link
G Myocd myocardin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2136697|PMID:11439182) MGI
Ensembl
PMID:11439182 GO_REF:0000107 MGI:2136697 NCBI chrNW_004936595:5,256,615...5,356,563
Ensembl chrNW_004936595:5,256,785...5,351,723
JBrowse link
regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Med1 mediator complex subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3655015|PMID:16324150) MGI
Ensembl
PMID:16324150 GO_REF:0000107 MGI:3655015 NCBI chrNW_004936490:14,625,201...14,663,184
Ensembl chrNW_004936490:14,625,897...14,657,802
JBrowse link
G Snw1 SNW domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:6,494,556...6,531,297
Ensembl chrNW_004936488:6,494,562...6,531,600
JBrowse link
G Trim24 tripartite motif containing 24 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3776949|PMID:18287084) MGI
Ensembl
PMID:18287084 GO_REF:0000107 MGI:3776949 NCBI chrNW_004936592:2,902,805...2,962,602
Ensembl chrNW_004936592:2,863,743...2,963,977
JBrowse link
vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pim1 Pim-1 proto-oncogene, serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:22,295,023...22,300,155
Ensembl chrNW_004936476:22,295,021...22,300,161
JBrowse link
G Vdr vitamin D receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:5,741,836...5,800,999
Ensembl chrNW_004936512:5,740,748...5,801,109
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15868
    response to stimulus 8526
      response to external stimulus 2721
        cellular response to external stimulus 427
          cellular response to external biotic stimulus 2
          cellular response to extracellular stimulus + 325
          cellular response to mechanical stimulus 113
paths to the root