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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to external stimulus
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Accession:GO:0071496 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external stimulus.
Comment:Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.



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cell-cell adhesion in response to extracellular stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITGA4 integrin subunit alpha 4 involved_in ISO (PMID:11078691) ARUK-UCL PMID:11078691 NCBI chr36:24,670,464...24,686,719
Ensembl chr36:24,653,408...24,729,057
JBrowse link
G VCAM1 vascular cell adhesion molecule 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:49,341,669...49,359,841
Ensembl chr 6:49,342,151...49,359,933
JBrowse link
cellular response to amino acid starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF3 activating transcription factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:10,784,445...10,795,285
Ensembl chr 7:10,782,064...10,794,163
JBrowse link
G ATF4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:25,528,880...25,531,018
Ensembl chr10:25,528,874...25,530,993
JBrowse link
G BECN1 beclin 1 ISO RGD PMID:22835012 RGD:11561942 NCBI chr 9:20,204,203...20,215,081
Ensembl chr 9:20,204,220...20,214,236
JBrowse link
G BMT2 base methyltransferase of 25S rRNA 2 homolog involved_in ISO (PMID:29123071) UniProt PMID:29123071 NCBI chr14:52,363,629...52,456,440
Ensembl chr14:52,366,219...52,456,404
JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A involved_in ISO (PMID:26102367)
(MGI:5700278|PMID:26102367)
UniProt PMID:26102367 MGI:5700278 NCBI chr12:5,746,898...5,755,103
Ensembl chr12:5,745,852...5,892,281
JBrowse link
G CEP192 centrosomal protein 192 involved_in ISO (PMID:23723238) UniProt PMID:23723238 NCBI chr 7:78,352,153...78,383,546
Ensembl chr 7:78,351,992...78,541,669
JBrowse link
G DAPL1 death associated protein like 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr36:4,678,544...4,698,711
Ensembl chr36:4,678,563...4,698,710
JBrowse link
G DEPDC5 DEP domain containing 5, GATOR1 subcomplex subunit involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr26:24,629,369...24,754,728
Ensembl chr26:24,630,295...24,754,256
JBrowse link
G EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:29,494,641...29,537,933
Ensembl chr17:29,496,128...29,537,933
JBrowse link
G EIF2AK3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:37,886,397...37,950,671
Ensembl chr17:37,886,601...37,949,812
JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:5576818|PMID:24333428)
(PMID:25329545)
(MGI:3722921|PMID:14729979)
UniProt
ParkinsonsUK-UCL
PMID:14729979 PMID:24333428 PMID:25329545 MGI:3722921 MGI:5576818 NCBI chr30:7,144,727...7,248,014
Ensembl chr30:7,144,570...7,248,000
JBrowse link
G EIF2S1 eukaryotic translation initiation factor 2 subunit alpha involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 8:41,354,400...41,371,676
Ensembl chr 8:41,351,244...41,371,056
JBrowse link
G FAS Fas cell surface death receptor involved_in ISO (PMID:11096076) CAFA PMID:11096076 NCBI chr26:38,738,811...38,763,298
Ensembl chr26:38,737,611...38,763,321
JBrowse link
G FLCN folliculin involved_in ISO (PMID:24095279), (PMID:27113757), (PMID:31672913) UniProt PMID:24095279 PMID:27113757 PMID:31672913 NCBI chr 5:42,176,093...42,195,718
Ensembl chr 5:42,176,291...42,195,711
JBrowse link
G GCN1 GCN1 activator of EIF2AK4 involved_in ISO (MGI:5576818|PMID:24333428) UniProt PMID:24333428 MGI:5576818 NCBI chr26:16,087,380...16,146,865
Ensembl chr26:16,087,382...16,146,813
JBrowse link
G HNRNPL heterogeneous nuclear ribonucleoprotein L ISO RGD PMID:19273590 RGD:9999430 NCBI chr 1:114,267,195...114,279,107
Ensembl chr 1:114,267,210...114,278,837
JBrowse link
G IMPACT impact RWD domain protein involved_in ISO (MGI:5576818|PMID:24333428) UniProt PMID:24333428 MGI:5576818 NCBI chr 7:63,947,117...63,976,628
Ensembl chr 7:63,948,157...63,976,613
JBrowse link
G ITFG2 integrin alpha FG-GAP repeat containing 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr27:41,933,741...41,944,464
Ensembl chr27:41,934,575...41,944,472
JBrowse link
G KICS2 KICSTOR subunit 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:6,977,602...6,998,204
Ensembl chr10:6,979,624...6,998,138
JBrowse link
G KPTN kaptin, actin binding protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:108,535,140...108,544,405
Ensembl chr 1:108,535,681...108,543,164
JBrowse link
G LARS1 leucyl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:40,544,031...40,619,268
Ensembl chr 2:40,544,210...40,635,281
JBrowse link
G LOC106559613 60S ribosomal protein L17-like ISO RGD PMID:8144559 RGD:1304507 NCBI chr13:12,340,847...12,341,465 JBrowse link
G LOC607300 death associated protein involved_in ISO (PMID:20537536) UniProt PMID:20537536 NCBI chr34:3,616,960...3,682,424
Ensembl chr34:3,617,000...3,680,793
JBrowse link
G MAP1LC3A microtubule associated protein 1 light chain 3 alpha ISO RGD PMID:22835012 RGD:11561942 NCBI chr24:23,672,343...23,673,937
Ensembl chr24:23,633,579...23,673,921
JBrowse link
G MAP3K5 mitogen-activated protein kinase kinase kinase 5 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:29,107,813...29,306,437
Ensembl chr 1:29,108,591...29,306,503
JBrowse link
G MAPK1 mitogen-activated protein kinase 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr26:31,013,607...31,132,998
Ensembl chr26:31,013,607...31,132,998
JBrowse link
G MAPK3 mitogen-activated protein kinase 3 involved_in ISO (PMID:11096076) CAFA PMID:11096076 NCBI chr 6:18,109,184...18,115,728
Ensembl chr 6:18,109,222...18,114,425
JBrowse link
G MAPK8 mitogen-activated protein kinase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:323,361...410,367
Ensembl chr28:368,513...406,401
JBrowse link
G MIOS meiosis regulator for oocyte development involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:23,234,618...23,464,148
Ensembl chr14:23,171,050...23,555,257
JBrowse link
G MIOS meiosis regulator for oocyte development involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr14:23,171,028...23,208,055
Ensembl chr14:23,171,050...23,555,257
JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in ISO (PMID:22343943), (PMID:22424946), (PMID:22576015), (PMID:22692423) UniProt PMID:22343943 PMID:22424946 PMID:22576015 PMID:22692423 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114
JBrowse link
G NPRL2 NPR2 like, GATOR1 complex subunit involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr20:39,005,699...39,009,183
Ensembl chr20:39,005,734...39,009,189
JBrowse link
G NPRL3 NPR3 like, GATOR1 complex subunit involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
UniProt
InterPro
PMID:21873635 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr 6:40,351,757...40,394,599
Ensembl chr 6:40,352,477...40,390,489
JBrowse link
G PRKCH protein kinase C eta involved_in ISO (PMID:19797084) UniProt PMID:19797084 NCBI chr 8:36,185,430...36,452,893
Ensembl chr 8:36,219,212...36,451,777
JBrowse link
G PRKD1 protein kinase D1 involved_in ISO (PMID:22095288) ParkinsonsUK-UCL PMID:22095288 NCBI chr 8:9,004,641...9,327,054
Ensembl chr 8:9,005,115...9,328,358
JBrowse link
G RNF152 ring finger protein 152 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:14,914,508...15,001,843
Ensembl chr 1:14,985,769...14,986,380
JBrowse link
G RPS25 ribosomal protein S25 ISO RGD PMID:8144559 RGD:1304507 NCBI chr 5:14,833,804...14,836,376
Ensembl chr 5:14,833,918...14,836,749
JBrowse link
G RRAGA Ras related GTP binding A involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:38,886,990...38,888,634
Ensembl chr11:38,886,397...38,888,184
JBrowse link
G RRAGB Ras related GTP binding B involved_in ISO (PMID:23723238) UniProt PMID:23723238 NCBI chr  X:47,323,427...47,361,551
Ensembl chr  X:47,323,269...47,361,138
JBrowse link
G RRAGC Ras related GTP binding C involved_in ISO (PMID:23723238) UniProt PMID:23723238 NCBI chr15:3,875,193...3,892,501
Ensembl chr15:3,874,116...3,892,504
JBrowse link
G SESN1 sestrin 1 involved_in ISO (PMID:25263562) UniProt PMID:25263562 NCBI chr12:65,958,995...66,057,369
Ensembl chr12:65,960,066...66,057,035
JBrowse link
G SESN2 sestrin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:72,151,464...72,168,861
Ensembl chr 2:72,151,868...72,168,492
JBrowse link
G SESN3 sestrin 3 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr21:5,827,957...5,899,540
Ensembl chr21:5,777,780...5,892,805
JBrowse link
G SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 involved_in ISO (PMID:21068542) UniProt PMID:21068542 NCBI chr 6:61,439,414...61,471,414
Ensembl chr 6:61,439,415...61,462,087
JBrowse link
G SLC38A2 solute carrier family 38 member 2 ISO RGD PMID:11311116 RGD:68721 NCBI chr27:8,056,289...8,068,988
Ensembl chr27:8,018,880...8,066,331
JBrowse link
G SZT2 SZT2 subunit of KICSTOR complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:16,729,068...16,780,549
Ensembl chr15:16,728,758...16,780,325
JBrowse link
G TFEB transcription factor EB involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:10,367,979...10,423,478
Ensembl chr12:10,368,599...10,452,619
JBrowse link
G UCP2 uncoupling protein 2 ISO glutamine RGD PMID:18692019 RGD:7240714 NCBI chr21:24,304,410...24,311,392
Ensembl chr21:24,304,457...24,311,128
JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 involved_in ISO (MGI:5607224|PMID:21855797) ParkinsonsUK-UCL PMID:21855797 MGI:5607224 NCBI chr26:968,714...982,244
Ensembl chr26:970,138...982,229
JBrowse link
G WDR24 WD repeat domain 24 involved_in ISO (PMID:23723238) UniProt PMID:23723238 NCBI chr 6:39,887,968...39,891,633
Ensembl chr 6:39,887,667...39,891,588
JBrowse link
G WDR59 WD repeat domain 59 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 5:75,697,828...75,811,323
Ensembl chr 5:75,706,791...75,811,055
JBrowse link
cellular response to calcium ion starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPP1R15A protein phosphatase 1 regulatory subunit 15A ISO RGD PMID:9878749 RGD:9999163 NCBI chr 1:107,486,399...107,490,151
Ensembl chr 1:107,486,438...107,489,222
JBrowse link
cellular response to cell-matrix adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSPP dentin sialophosphoprotein acts_upstream_of_or_within ISO (MGI:3712614|PMID:17286598) MGI PMID:17286598 MGI:3712614 NCBI chr32:11,017,440...11,022,780 JBrowse link
G FSCN1 fascin actin-bundling protein 1 ISO RGD PMID:7657718 RGD:2317778 NCBI chr 6:12,360,849...12,370,906
Ensembl chr 6:12,354,599...12,370,808
JBrowse link
G GSTP1 glutathione S-transferase pi 1 ISO RGD PMID:10793289 RGD:2317832 NCBI chr18:49,905,161...49,908,182
Ensembl chr18:49,905,161...49,908,182
JBrowse link
G MMP3 matrix metallopeptidase 3 (stromelysin 1, progelatinase) ISO RGD PMID:12963432 RGD:2325968 NCBI chr 5:28,949,631...28,957,915
Ensembl chr 5:28,949,631...28,958,222
JBrowse link
G MMP9 matrix metallopeptidase 9 ISO RGD PMID:12963432 PMID:20218972 RGD:2325787 RGD:2325968 NCBI chr24:33,274,260...33,281,116
Ensembl chr24:33,274,268...33,281,293
JBrowse link
G SKP2 S-phase kinase associated protein 2 ISO RGD PMID:11425869 RGD:2315071 NCBI chr 4:72,352,966...72,386,469
Ensembl chr 4:72,352,986...72,386,307
JBrowse link
cellular response to copper ion starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AOC1 amine oxidase copper containing 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr16:14,955,528...14,963,283
Ensembl chr16:14,958,658...15,036,651
JBrowse link
cellular response to external biotic stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB1 ATP binding cassette subfamily B member 1 ISO RGD PMID:16353156 RGD:2316359 NCBI chr14:13,644,891...13,852,829
Ensembl chr14:13,542,647...13,742,727
JBrowse link
G CDA cytidine deaminase ISO K-selection - confluent culture RGD PMID:16353156 RGD:2316359 NCBI chr 2:78,305,328...78,327,229
Ensembl chr 2:78,304,726...78,327,247
JBrowse link
cellular response to extracellular stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADNP activity dependent neuroprotector homeobox ISO vasoactive intestinal peptide RGD PMID:15518891 RGD:2312774 NCBI chr24:37,211,776...37,245,938
Ensembl chr24:37,213,942...37,243,702
JBrowse link
G ADORA2B adenosine A2b receptor acts_upstream_of_or_within ISO (MGI:65736|PMID:8157966) MGI PMID:8157966 MGI:65736 NCBI chr 5:39,884,375...39,908,214 JBrowse link
G AIF1 allograft inflammatory factor 1 ISO lipopolysaccharide RGD PMID:18717813 RGD:2313015 NCBI chr12:1,104,350...1,106,179
Ensembl chr12:1,104,394...1,106,177
JBrowse link
G ALDOB aldolase, fructose-bisphosphate B ISO 3D hepatocyte culture RGD PMID:15770659 RGD:2313417 NCBI chr11:58,150,621...58,166,266
Ensembl chr11:58,150,967...58,176,319
JBrowse link
G ARHGAP35 Rho GTPase activating protein 35 involved_in ISS
IEA
UniProt
UniProt
Ensembl
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:108,952,836...109,034,329
Ensembl chr 1:108,952,562...109,034,337
JBrowse link
G AXL AXL receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:1335904|PMID:10322635) MGI PMID:10322635 MGI:1335904 NCBI chr 1:112,699,679...112,727,434
Ensembl chr 1:112,700,365...112,726,960
JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A involved_in ISO (PMID:17553787) BHF-UCL PMID:17553787 NCBI chr12:5,746,898...5,755,103
Ensembl chr12:5,745,852...5,892,281
JBrowse link
G CDKN2B cyclin dependent kinase inhibitor 2B involved_in ISS UniProt GO_REF:0000024 NCBI chr11:41,259,627...41,264,832 JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1096764|PMID:9294610) Ensembl
Ensembl
MGI
PMID:9294610 GO_REF:0000107 MGI:1096764 NCBI chr 8:48,330,856...48,334,273
Ensembl chr 8:48,331,026...48,333,467
JBrowse link
G FOSL1 FOS like 1, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1096764|PMID:9294610) Ensembl
Ensembl
MGI
PMID:9294610 GO_REF:0000107 MGI:1096764 NCBI chr18:51,366,719...51,374,411
Ensembl chr18:51,368,352...51,373,748
JBrowse link
G GSDMD gasdermin D acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1335904|PMID:10322635) MGI
Ensembl
PMID:10322635 GO_REF:0000107 MGI:1335904 NCBI chr13:37,221,219...37,226,912
Ensembl chr13:37,193,022...37,228,360
JBrowse link
G ITGA6 integrin subunit alpha 6 acts_upstream_of_or_within ISO (MGI:1335904|PMID:10322635) MGI PMID:10322635 MGI:1335904 NCBI chr36:16,777,363...16,858,725
Ensembl chr36:16,776,863...16,855,449
JBrowse link
G LDHA lactate dehydrogenase A acts_upstream_of_or_within ISO (MGI:1335904|PMID:10322635) MGI PMID:10322635 MGI:1335904 NCBI chr21:40,829,844...40,840,947 JBrowse link
G LOC489461 asialoglycoprotein receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:58018|PMID:3215517) MGI
Ensembl
Ensembl
PMID:3215517 GO_REF:0000107 MGI:58018 NCBI chr 5:32,156,746...32,159,927
Ensembl chr 5:32,089,454...32,159,866
JBrowse link
G LYN LYN proto-oncogene, Src family tyrosine kinase ISO RGD PMID:17845203 RGD:2303708 NCBI chr29:7,367,617...7,448,862
Ensembl chr29:7,332,684...7,448,507
JBrowse link
G NR4A2 nuclear receptor subfamily 4 group A member 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:84485|PMID:8961274)
(PMID:7877627)
MGI
Ensembl
Ensembl
PMID:7877627 PMID:8961274 GO_REF:0000107 MGI:84485 NCBI chr36:2,546,237...2,554,559
Ensembl chr36:2,547,421...2,552,780
JBrowse link
G P2RX7 purinergic receptor P2X 7 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3772417|PMID:18082965) MGI
Ensembl
PMID:18082965 GO_REF:0000107 MGI:3772417 NCBI chr26:7,928,863...7,983,956
Ensembl chr26:7,940,985...7,983,740
JBrowse link
G PLEC plectin involved_in ISO (MGI:1313095|PMID:9808630) MGI PMID:9808630 MGI:1313095 NCBI chr13:37,449,379...37,503,752
Ensembl chr13:37,450,248...37,513,523
JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C involved_in ISO (MGI:3530407|PMID:15661907) ARUK-UCL PMID:15661907 MGI:3530407 NCBI chr 7:4,155,876...4,282,151
Ensembl chr 7:4,137,728...4,282,124
JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1335904|PMID:10322635) Ensembl
Ensembl
MGI
PMID:10322635 GO_REF:0000107 MGI:1335904 NCBI chr15:51,541,197...51,548,765
Ensembl chr15:51,540,500...51,548,765
JBrowse link
G SLC1A2 solute carrier family 1 member 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3608234|PMID:16197522) MGI
Ensembl
PMID:16197522 GO_REF:0000107 MGI:3608234 NCBI chr18:32,565,258...32,717,052
Ensembl chr18:32,565,258...32,709,225
JBrowse link
G TLE5 TLE family member 5, transcriptional modulator acts_upstream_of_or_within ISO (MGI:1335904|PMID:10322635) MGI PMID:10322635 MGI:1335904
cellular response to folic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC476816 folate receptor beta involved_in IEA GOC
GOC
GO_REF:0000108 NCBI chr21:25,917,476...25,923,267 JBrowse link
G LOC609612 folate receptor alpha involved_in IEA GOC
GOC
GO_REF:0000108 NCBI chr21:25,944,350...25,951,010 JBrowse link
cellular response to glucose starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASNS asparagine synthetase (glutamine-hydrolyzing) involved_in IEA
ISO
Ensembl
RGD
PMID:10085239 GO_REF:0000107 RGD:2315999 NCBI chr14:22,718,020...22,734,109
Ensembl chr14:22,718,042...22,734,054
JBrowse link
G ATF4 activating transcription factor 4 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr10:25,528,880...25,531,018
Ensembl chr10:25,528,874...25,530,993
JBrowse link
G ATG14 autophagy related 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:31,199,097...31,234,200
Ensembl chr 8:31,201,709...31,234,217
JBrowse link
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:77298|PMID:7595537) MGI
Ensembl
PMID:7595537 GO_REF:0000107 MGI:77298 NCBI chr 1:13,733,849...13,900,653
Ensembl chr 1:13,731,406...13,900,658
JBrowse link
G BECN1 beclin 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:20,204,203...20,215,081
Ensembl chr 9:20,204,220...20,214,236
JBrowse link
G BHLHA15 basic helix-loop-helix family member a15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:11,112,233...11,115,776
Ensembl chr 6:11,114,694...11,115,257
JBrowse link
G BRSK1 BR serine/threonine kinase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:102,367,050...102,384,942
Ensembl chr 1:102,367,581...102,385,466
JBrowse link
G BRSK2 BR serine/threonine kinase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:45,666,489...45,688,950
Ensembl chr18:45,628,970...45,689,494
JBrowse link
G CHKA choline kinase alpha involved_in ISO (PMID:34077757) UniProt PMID:34077757 NCBI chr18:49,717,512...49,784,653
Ensembl chr18:49,745,437...49,781,882
JBrowse link
G CPEB4 cytoplasmic polyadenylation element binding protein 4 involved_in ISO PMID:20937770 UniProt PMID:20937770 RGD:8553637 NCBI chr 4:38,604,065...38,665,200
Ensembl chr 4:38,607,948...38,664,821
JBrowse link
G EIF2AK3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:37,886,397...37,950,671
Ensembl chr17:37,886,601...37,949,812
JBrowse link
G FOXO3 forkhead box O3 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr12:65,552,455...65,673,467
Ensembl chr12:65,552,310...65,670,198
JBrowse link
G GCK glucokinase ISO down-regulation of the counterregulatory response to insulin-induced hypoglycemia RGD PMID:18292346 RGD:2301900
G HIGD1A HIG1 hypoxia inducible domain family member 1A acts_upstream_of_or_within ISO (MGI:3654896|PMID:16815968)
(MGI:5643884|PMID:25683712)
MGI PMID:16815968 PMID:25683712 MGI:3654896 MGI:5643884 NCBI chr23:11,893,117...11,903,934 JBrowse link
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:1,013,459...1,020,083
Ensembl chr27:1,015,868...1,019,891
JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 involved_in ISO (PMID:10085239) UniProt PMID:10085239 NCBI chr 9:57,850,870...57,855,607
Ensembl chr 9:57,850,922...57,855,257
JBrowse link
G IMPACT impact RWD domain protein involved_in ISO (MGI:5576818|PMID:24333428) UniProt PMID:24333428 MGI:5576818 NCBI chr 7:63,947,117...63,976,628
Ensembl chr 7:63,948,157...63,976,613
JBrowse link
G ITFG2 integrin alpha FG-GAP repeat containing 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr27:41,933,741...41,944,464
Ensembl chr27:41,934,575...41,944,472
JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:51,499,615...51,507,434
Ensembl chr18:51,499,938...51,576,699
JBrowse link
G KICS2 KICSTOR subunit 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:6,977,602...6,998,204
Ensembl chr10:6,979,624...6,998,138
JBrowse link
G KPTN kaptin, actin binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,535,140...108,544,405
Ensembl chr 1:108,535,681...108,543,164
JBrowse link
G LOC488622 myeloid cell nuclear differentiation antigen involved_in ISO (PMID:21573174) UniProt PMID:21573174 NCBI chr38:22,874,345...22,892,362 JBrowse link
G MTMR3 myotubularin related protein 3 involved_in ISO (PMID:25578879) ParkinsonsUK-UCL PMID:25578879 NCBI chr26:23,047,500...23,187,694
Ensembl chr26:23,047,345...23,186,262
JBrowse link
G MYBBP1A MYB binding protein 1a involved_in ISO (PMID:21471221) UniProt PMID:21471221 NCBI chr 5:30,528,141...30,538,815
Ensembl chr 5:30,526,720...30,539,483
JBrowse link
G NFE2L2 NFE2 like bZIP transcription factor 2 involved_in ISO (MGI:5616326|PMID:14978030) ParkinsonsUK-UCL PMID:14978030 MGI:5616326 NCBI chr36:20,989,205...21,087,044
Ensembl chr36:20,989,360...21,012,524
JBrowse link
G NIM1K NIM1 serine/threonine protein kinase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:66,662,920...66,726,675
Ensembl chr 4:66,662,951...66,705,908
JBrowse link
G NUAK1 NUAK family kinase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:32,463,845...32,537,425
Ensembl chr10:32,464,123...32,536,650
JBrowse link
G NUAK2 NUAK family kinase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr38:1,797,899...1,816,087
Ensembl chr38:1,798,802...1,816,185
JBrowse link
G PICK1 protein interacting with PRKCA 1 involved_in ISO PMID:23843614 UniProt PMID:23843614 RGD:8553949 NCBI chr10:26,595,301...26,614,170
Ensembl chr10:26,595,768...26,613,756
JBrowse link
G PIK3C3 phosphatidylinositol 3-kinase catalytic subunit type 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:48,663,381...48,800,350
Ensembl chr 7:48,663,381...48,800,437
JBrowse link
G PIK3R4 phosphoinositide-3-kinase regulatory subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:27,902,500...27,973,609
Ensembl chr23:27,902,840...27,971,892
JBrowse link
G PLIN2 perilipin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:38,940,063...38,959,126
Ensembl chr11:38,940,065...38,959,070
JBrowse link
G PLIN3 perilipin 3 involved_in ISO (PMID:34077757) UniProt PMID:34077757 NCBI chr20:54,919,034...54,938,665
Ensembl chr20:54,924,149...54,938,167
JBrowse link
G PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:16,469,793...16,472,910
Ensembl chr 1:16,469,793...16,472,910
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO (PMID:34077757)
(MGI:5285135|PMID:21258367), (MGI:6721355|PMID:34077757)
UniProt PMID:21258367 PMID:34077757 MGI:5285135 MGI:6721355 NCBI chr 4:68,579,061...68,614,548
Ensembl chr 4:68,579,037...68,611,841
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in ISO (PMID:34077757)
(MGI:5285135|PMID:21258367), (MGI:5619439|PMID:23332761), (MGI:6721355|PMID:34077757)
UniProt PMID:21258367 PMID:23332761 PMID:34077757 MGI:5285135 MGI:5619439 MGI:6721355 NCBI chr 5:52,809,792...52,855,072
Ensembl chr 5:52,815,609...52,876,609
JBrowse link
G PRKAG1 protein kinase AMP-activated non-catalytic subunit gamma 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr27:5,556,433...5,570,675
Ensembl chr27:5,556,549...5,570,235
JBrowse link
G PRKAG2 protein kinase AMP-activated non-catalytic subunit gamma 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:15,521,304...15,786,237
Ensembl chr16:15,522,111...15,785,854
JBrowse link
G PRKAG3 protein kinase AMP-activated non-catalytic subunit gamma 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr37:25,405,794...25,414,745
Ensembl chr37:25,406,190...25,414,961
JBrowse link
G PRKCD protein kinase C delta ISO RGD PMID:17728702 RGD:1642520 NCBI chr20:36,723,491...36,751,982
Ensembl chr20:36,723,809...36,752,191
JBrowse link
G RRP8 ribosomal RNA processing 8 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr21:29,907,555...29,917,142
Ensembl chr21:29,907,361...29,918,408
JBrowse link
G SESN1 sestrin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:65,958,995...66,057,369
Ensembl chr12:65,960,066...66,057,035
JBrowse link
G SESN2 sestrin 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 2:72,151,464...72,168,861
Ensembl chr 2:72,151,868...72,168,492
JBrowse link
G SESN3 sestrin 3 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr21:5,827,957...5,899,540
Ensembl chr21:5,777,780...5,892,805
JBrowse link
G SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 involved_in ISO (PMID:21068542) UniProt PMID:21068542 NCBI chr 6:61,439,414...61,471,414
Ensembl chr 6:61,439,415...61,462,087
JBrowse link
G SIK1 salt inducible kinase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr31:37,455,130...37,466,829 JBrowse link
G SIK2 salt inducible kinase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:21,354,127...21,479,891
Ensembl chr 5:21,358,902...21,479,841
JBrowse link
G SIRT1 sirtuin 1 involved_in ISO (PMID:18485871) ComplexPortal PMID:18485871 NCBI chr 4:19,188,616...19,220,031
Ensembl chr 4:19,188,675...19,218,279
JBrowse link
G SLC2A1 solute carrier family 2 member 1 acts_upstream_of_or_within ISO (MGI:1932248|PMID:11259273) MGI PMID:11259273 MGI:1932248 NCBI chr15:463,307...493,145
Ensembl chr15:463,237...493,140
JBrowse link
G SLC3A2 solute carrier family 3 member 2 ISO RGD PMID:22185814 RGD:151361127 NCBI chr18:53,810,468...53,819,021
Ensembl chr18:53,810,398...53,819,021
JBrowse link
G SLC7A5 solute carrier family 7 member 5 ISO RGD PMID:22185814 RGD:151361127 NCBI chr 5:65,313,105...65,343,858
Ensembl chr 5:65,313,105...65,343,858
JBrowse link
G SUV39H1 SUV39H1 histone lysine methyltransferase involved_in ISO (PMID:18485871) ComplexPortal PMID:18485871 NCBI chr  X:41,894,623...41,907,854
Ensembl chr  X:41,893,045...41,906,403
JBrowse link
G SZT2 SZT2 subunit of KICSTOR complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:16,729,068...16,780,549
Ensembl chr15:16,728,758...16,780,325
JBrowse link
G TBL2 transducin beta like 2 involved_in ISO (PMID:25393282) ParkinsonsUK-UCL PMID:25393282 NCBI chr 6:6,656,158...6,664,900
Ensembl chr 6:6,656,035...6,660,963
JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14744935) MGI
Ensembl
Ensembl
PMID:14744935 GO_REF:0000107 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109
JBrowse link
G UPP1 uridine phosphorylase 1 ISO RGD PMID:18457515 RGD:2317094 NCBI chr18:108,215...120,213 JBrowse link
G VLDLR very low density lipoprotein receptor ISO RGD PMID:18262491 RGD:2324645 NCBI chr 1:91,242,010...91,277,030
Ensembl chr 1:91,241,509...91,272,495
JBrowse link
G XBP1 X-box binding protein 1 involved_in ISO (MGI:5607242|PMID:17612490) UniProt PMID:17612490 MGI:5607242 NCBI chr26:22,162,675...22,168,149
Ensembl chr26:22,163,222...22,168,105
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:4,972,369...4,984,218
Ensembl chr15:4,972,956...4,980,371
JBrowse link
cellular response to iron ion starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HFE homeostatic iron regulator ISO RGD PMID:16208485 RGD:1582698 NCBI chr35:24,031,479...24,038,922
Ensembl chr35:24,031,387...24,042,413
JBrowse link
cellular response to L-ascorbic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELN elastin ISO RGD PMID:2859894 RGD:9585689 NCBI chr 6:6,299,524...6,331,425
Ensembl chr 6:6,300,727...6,331,325
JBrowse link
G LEP leptin ISO RGD PMID:20400526 RGD:5128594 NCBI chr14:8,115,396...8,130,946
Ensembl chr14:8,116,122...8,131,395
JBrowse link
cellular response to leucine starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr36:19,032,376...19,103,382
Ensembl chr36:19,010,717...19,103,292
JBrowse link
G ATF4 activating transcription factor 4 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr10:25,528,880...25,531,018
Ensembl chr10:25,528,874...25,530,993
JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:5494763|PMID:23447528) UniProt PMID:23447528 MGI:5494763 NCBI chr30:7,144,727...7,248,014
Ensembl chr30:7,144,570...7,248,000
JBrowse link
G GCN1 GCN1 activator of EIF2AK4 involved_in ISO (MGI:5494763|PMID:23447528) UniProt PMID:23447528 MGI:5494763 NCBI chr26:16,087,380...16,146,865
Ensembl chr26:16,087,382...16,146,813
JBrowse link
G IMPACT impact RWD domain protein involved_in ISO (MGI:5494763|PMID:23447528) UniProt PMID:23447528 MGI:5494763 NCBI chr 7:63,947,117...63,976,628
Ensembl chr 7:63,948,157...63,976,613
JBrowse link
G LARS1 leucyl-tRNA synthetase 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 2:40,544,031...40,619,268
Ensembl chr 2:40,544,210...40,635,281
JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114
JBrowse link
G RNF167 ring finger protein 167 involved_in ISO (PMID:35114100) UniProt PMID:35114100 NCBI chr 5:31,673,540...31,676,705
Ensembl chr 5:31,674,284...31,676,441
JBrowse link
G RRAGB Ras related GTP binding B involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:47,323,427...47,361,551
Ensembl chr  X:47,323,269...47,361,138
JBrowse link
G RRAGD Ras related GTP binding D involved_in ISO (PMID:22424946) CAFA PMID:22424946 NCBI chr12:48,583,350...48,625,032
Ensembl chr12:48,585,937...48,625,130
JBrowse link
G SESN1 sestrin 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:65,958,995...66,057,369
Ensembl chr12:65,960,066...66,057,035
JBrowse link
G SESN2 sestrin 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 2:72,151,464...72,168,861
Ensembl chr 2:72,151,868...72,168,492
JBrowse link
G SESN3 sestrin 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr21:5,827,957...5,899,540
Ensembl chr21:5,777,780...5,892,805
JBrowse link
cellular response to magnesium starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRIN2B glutamate ionotropic receptor NMDA type subunit 2B ISO RGD PMID:17428633 RGD:4106247 NCBI chr27:32,470,889...32,883,606
Ensembl chr27:32,471,153...32,877,680
JBrowse link
cellular response to mechanical stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFAP1 actin filament associated protein 1 ISO mechanical cyclic stretching RGD PMID:12114187 RGD:625602 NCBI chr 3:59,686,887...59,828,924
Ensembl chr 3:59,689,014...59,829,041
JBrowse link
G AGT angiotensinogen ISO RGD PMID:21131638 RGD:5129192 NCBI chr 4:8,681,192...8,694,059
Ensembl chr 4:8,683,798...8,693,880
JBrowse link
G AKT1 AKT serine/threonine kinase 1 ISO RGD PMID:20042609 RGD:7242068 NCBI chr 8:72,317,399...72,335,686
Ensembl chr 8:72,317,869...72,335,193
JBrowse link
G ANKRD1 ankyrin repeat domain 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr28:5,569,120...5,578,393
Ensembl chr28:5,569,501...5,601,956
JBrowse link
G AQP1 aquaporin 1 (Colton blood group) involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr14:43,592,266...43,603,903
Ensembl chr14:43,578,721...43,605,720
JBrowse link
G ARHGDIA Rho GDP dissociation inhibitor alpha ISO RGD PMID:18566890 RGD:9684962 NCBI chr 9:419,350...422,284
Ensembl chr 9:419,413...423,252
JBrowse link
G ATP1A1 ATPase Na+/K+ transporting subunit alpha 1 ISO RGD PMID:17458903 RGD:6903221 NCBI chr17:53,828,482...53,847,043
Ensembl chr17:53,813,976...53,847,167
JBrowse link
G B9D2 B9 domain containing 2 ISO RGD PMID:19012730 PMID:24120154 RGD:11073676 RGD:8662390 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G BAD BCL2 associated agonist of cell death involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr18:52,781,335...52,791,789
Ensembl chr18:52,781,921...52,791,405
JBrowse link
G BAG3 BAG cochaperone 3 acts_upstream_of_or_within ISO (MGI:3656163|PMID:16936253) MGI PMID:16936253 MGI:3656163 NCBI chr28:29,792,612...29,815,466
Ensembl chr28:29,792,777...29,815,138
JBrowse link
G BAK1 BCL2 antagonist/killer 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr12:2,950,359...2,957,604
Ensembl chr12:2,948,364...2,957,018
JBrowse link
G BCL10 BCL10 immune signaling adaptor involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:62,712,937...62,723,852
Ensembl chr 6:62,712,971...62,722,368
JBrowse link
G BMP2 bone morphogenetic protein 2 ISO RGD PMID:20877159 RGD:9068439 NCBI chr24:15,199,667...15,211,509
Ensembl chr24:15,200,291...15,212,217
JBrowse link
G BMP4 bone morphogenetic protein 4 ISO RGD PMID:20877159 RGD:9068439 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
G BMP6 bone morphogenetic protein 6 ISO RGD PMID:23198877 RGD:7242187 NCBI chr35:7,780,763...7,833,095
Ensembl chr35:7,804,231...7,831,845
JBrowse link
G BNIP3 BCL2 interacting protein 3 involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr28:40,037,681...40,050,499
Ensembl chr28:40,038,643...40,049,797
JBrowse link
G CASP2 caspase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr16:6,378,447...6,396,251
Ensembl chr16:6,379,913...6,396,646
JBrowse link
G CASP8 caspase 8 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr37:10,362,071...10,402,108
Ensembl chr37:10,391,048...10,401,822
JBrowse link
G CASP8AP2 caspase 8 associated protein 2 involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr12:49,040,069...49,077,418
Ensembl chr12:49,039,411...49,077,688
JBrowse link
G CAV1 caveolin 1 ISO RGD PMID:20172952 RGD:6849300 NCBI chr14:55,458,934...55,494,563
Ensembl chr14:55,461,048...55,492,935
JBrowse link
G CD40 CD40 molecule involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr24:33,352,992...33,383,488
Ensembl chr24:33,372,930...33,383,301
JBrowse link
G CHEK1 checkpoint kinase 1 involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr 5:8,878,511...8,910,626
Ensembl chr 5:8,879,147...8,907,669
JBrowse link
G CNN2 calponin 2 acts_upstream_of_or_within ISO (PMID:16236705) MGI PMID:16236705 NCBI chr20:57,684,959...57,691,621
Ensembl chr20:57,637,796...57,691,896
JBrowse link
G COL1A1 collagen type I alpha 1 chain acts_upstream_of_or_within ISO uniaxial mechanical tension
(PMID:21625049)
RGD
UniProt
PMID:21625049 PMID:22615126 RGD:8552682 NCBI chr 9:26,183,852...26,199,927
Ensembl chr 9:26,183,852...26,199,927
JBrowse link
G COL2A1 collagen type II alpha 1 chain ISO cyclic compressive stress RGD PMID:19725071 RGD:8661239 NCBI chr27:6,756,994...6,787,733
Ensembl chr27:6,756,994...6,787,733
JBrowse link
G CRADD CASP2 and RIPK1 domain containing adaptor with death domain involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:33,873,600...34,052,498
Ensembl chr15:33,878,467...34,092,094
JBrowse link
G CTNNB1 catenin beta 1 ISO RGD PMID:20042609 RGD:7242068 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927
JBrowse link
G CTSB cathepsin B ISO cyclic tensile stress RGD PMID:18464888 RGD:2315512 NCBI chr25:26,048,237...26,056,570
Ensembl chr25:26,048,253...26,055,801
JBrowse link
G CYBA cytochrome b-245 alpha chain ISO RGD PMID:16685209 RGD:2317865 NCBI chr 5:64,692,865...64,701,056
Ensembl chr 5:64,692,123...64,704,893
JBrowse link
G DAG1 dystroglycan 1 ISO RGD PMID:18556591 RGD:11541067 NCBI chr20:39,707,672...39,779,094
Ensembl chr20:39,708,053...39,778,550
JBrowse link
G EDNRA endothelin receptor type A ISO RGD PMID:18320471 RGD:4889461 NCBI chr15:45,823,472...45,878,527
Ensembl chr15:45,823,560...45,876,463
JBrowse link
G EGFR epidermal growth factor receptor ISO mechanical stretch RGD PMID:20927110 RGD:5131524 NCBI chr18:5,983,669...6,044,092
Ensembl chr18:5,982,770...6,042,631
JBrowse link
G EGR1 early growth response 1 ISO cyclic stretch RGD PMID:16998809 RGD:5131896 NCBI chr11:26,046,195...26,049,806
Ensembl chr11:26,046,228...26,048,575
JBrowse link
G ENG endoglin ISO mechanical stretch RGD PMID:22941949 RGD:7248789 NCBI chr 9:55,558,246...55,590,081
Ensembl chr 9:55,558,305...55,589,064
JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:24157151 RGD:13204713 NCBI chr 1:251,985...322,081
Ensembl chr 1:252,103...322,718
JBrowse link
G F11R F11 receptor involved_in ISO (PMID:26985018) ARUK-UCL PMID:26985018 NCBI chr38:21,433,819...21,456,722
Ensembl chr38:21,451,952...21,454,959
JBrowse link
G F2 coagulation factor II, thrombin ISO RGD PMID:22915765 RGD:6893464 NCBI chr18:42,782,744...42,799,531
Ensembl chr18:42,782,751...42,799,459
JBrowse link
G FADD Fas associated via death domain involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr18:48,087,447...48,094,497 JBrowse link
G FAS Fas cell surface death receptor involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr26:38,738,811...38,763,298
Ensembl chr26:38,737,611...38,763,321
JBrowse link
G FGF2 fibroblast growth factor 2 ISO RGD PMID:19012730 RGD:8662390 NCBI chr19:17,403,288...17,463,143
Ensembl chr19:16,994,661...17,463,151
JBrowse link
G GADD45A growth arrest and DNA damage inducible alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:77,393,026...77,396,473
Ensembl chr 6:77,393,036...77,396,618
JBrowse link
G GCLC glutamate-cysteine ligase catalytic subunit ISO RGD PMID:20054150 RGD:8547898 NCBI chr12:20,999,815...21,047,779
Ensembl chr12:21,000,792...21,047,779
JBrowse link
G GJA1 gap junction protein alpha 1 ISO RGD PMID:10631100 RGD:7207855 NCBI chr 1:60,941,772...60,944,694
Ensembl chr 1:60,929,097...60,942,936
JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 ISO mechanical stretching RGD PMID:26880260 RGD:13504840 NCBI chr28:12,352,658...12,377,960
Ensembl chr28:12,352,659...12,414,579
JBrowse link
G GSK3B glycogen synthase kinase 3 beta ISO RGD PMID:20042609 RGD:7242068 NCBI chr33:23,458,369...23,659,878
Ensembl chr33:23,463,767...23,659,666
JBrowse link
G HABP4 hyaluronan binding protein 4 involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:70,339,386...70,381,694
Ensembl chr 1:70,340,627...70,377,204
JBrowse link
G HDAC3 histone deacetylase 3 ISO RGD PMID:19261284 RGD:9590196 NCBI chr 2:36,583,283...36,598,121
Ensembl chr 2:36,583,283...36,597,682
JBrowse link
G HDAC4 histone deacetylase 4 ISO RGD PMID:19261284 RGD:9590196 NCBI chr25:49,318,621...49,545,314
Ensembl chr25:49,317,349...49,453,478
JBrowse link
G HDAC7 histone deacetylase 7 ISO RGD PMID:19261284 RGD:9590196 NCBI chr27:6,941,287...6,968,370
Ensembl chr27:6,929,829...6,979,317
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha ISO RGD PMID:15183444 RGD:9068913 NCBI chr 8:36,614,045...36,656,692
Ensembl chr 8:36,614,045...36,656,692
JBrowse link
G IGF1R insulin like growth factor 1 receptor ISO RGD PMID:21854769 RGD:10046007 NCBI chr 3:41,795,337...42,096,255
Ensembl chr 3:41,794,623...42,090,387
JBrowse link
G IGF2 insulin like growth factor 2 ISO RGD PMID:20695079 RGD:5509947 NCBI chr18:46,294,036...46,311,982
Ensembl chr18:46,294,019...46,311,982
JBrowse link
G IL13 interleukin 13 ISO RGD PMID:18362439 RGD:2298568 NCBI chr11:20,957,870...20,961,391
Ensembl chr11:20,958,464...20,961,388
JBrowse link
G IL13RA2 interleukin 13 receptor subunit alpha 2 ISO RGD PMID:18362439 RGD:2298568 NCBI chr  X:87,747,373...87,776,797
Ensembl chr  X:87,747,373...87,776,798
JBrowse link
G IL18 interleukin 18 ISO RGD PMID:18320471 RGD:4889461 NCBI chr 5:20,972,742...20,995,327
Ensembl chr 5:20,972,871...20,995,348
JBrowse link
G IL1B interleukin 1 beta involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:37,019,329...37,033,388
Ensembl chr17:37,019,329...37,024,458
JBrowse link
G IL1RL1 interleukin 1 receptor like 1 ISO RGD PMID:17492053 RGD:40813740 NCBI chr10:40,658,191...40,732,097
Ensembl chr10:40,659,041...40,677,357
JBrowse link
G IL33 interleukin 33 ISO RGD PMID:17492053 RGD:40813740 NCBI chr11:27,219,878...27,256,723
Ensembl chr11:27,219,878...27,256,721
JBrowse link
G IRF1 interferon regulatory factor 1 involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr11:20,773,801...20,781,106
Ensembl chr11:20,760,120...20,781,608
JBrowse link
G ITGA2 integrin subunit alpha 2 ISO RGD PMID:12856576 RGD:1582308 NCBI chr 4:62,170,137...62,268,962
Ensembl chr 4:62,170,452...62,268,983
JBrowse link
G ITGB1 integrin subunit beta 1 ISO cyclic uniaxial tensile strain RGD PMID:19720043 RGD:2325327 NCBI chr 2:3,728,472...3,757,696
Ensembl chr 2:3,670,596...3,756,961
JBrowse link
G ITGB3 integrin subunit beta 3 ISO RGD PMID:12856576 RGD:1582308 NCBI chr 9:9,179,667...9,231,061
Ensembl chr 9:9,182,562...9,231,451
JBrowse link
G KCNJ2 potassium inwardly rectifying channel subfamily J member 2 ISO RGD PMID:17293496 RGD:7247436 NCBI chr 9:16,468,938...16,475,722
Ensembl chr 9:16,468,938...16,475,722
JBrowse link
G KCNJ4 potassium inwardly rectifying channel subfamily J member 4 ISO RGD PMID:17293496 RGD:7247436 NCBI chr10:26,321,274...26,348,978
Ensembl chr10:26,347,140...26,348,486
JBrowse link
G KCNK4 potassium two pore domain channel subfamily K member 4 involved_in ISO (PMID:22282805) UniProt PMID:22282805 NCBI chr18:52,767,151...52,775,053
Ensembl chr18:52,767,414...52,773,369
JBrowse link
G LOC487079 homeobox protein Mohawk ISO RGD PMID:27370800 RGD:40924660 NCBI chr 2:5,898,155...5,964,577 JBrowse link
G LOC607881 potassium voltage-gated channel subfamily D member 2-like ISO RGD PMID:17293496 RGD:7247436
G LOC610540 pulmonary surfactant-associated protein A-like ISO RGD PMID:12600831 RGD:4143475 NCBI chr 4:29,430,139...29,434,640 JBrowse link
G LTBP1 latent transforming growth factor beta binding protein 1 ISO RGD PMID:9607192 RGD:10412058 NCBI chr17:26,129,528...26,521,782
Ensembl chr17:26,130,781...26,521,779
JBrowse link
G LTBR lymphotoxin beta receptor involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr27:38,598,725...38,605,829
Ensembl chr27:38,599,268...38,605,780
JBrowse link
G MAG myelin associated glycoprotein ISO RGD PMID:16140204 RGD:9685293 NCBI chr 1:117,288,306...117,301,975
Ensembl chr 1:117,288,343...117,302,386
JBrowse link
G MAP2K4 mitogen-activated protein kinase kinase 4 involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr 5:36,142,610...36,243,673
Ensembl chr 5:36,118,388...36,241,296
JBrowse link
G MAP3K1 mitogen-activated protein kinase kinase kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:43,918,210...43,996,817
Ensembl chr 2:43,917,604...43,995,209
JBrowse link
G MAP3K14 mitogen-activated protein kinase kinase kinase 14 involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr 9:18,255,416...18,302,405
Ensembl chr 9:18,280,198...18,302,401
JBrowse link
G MAP3K2 mitogen-activated protein kinase kinase kinase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr19:23,210,106...23,303,426
Ensembl chr19:23,210,714...23,294,586
JBrowse link
G MAPK3 mitogen-activated protein kinase 3 involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr 6:18,109,184...18,115,728
Ensembl chr 6:18,109,222...18,114,425
JBrowse link
G MAPK8 mitogen-activated protein kinase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:323,361...410,367
Ensembl chr28:368,513...406,401
JBrowse link
G MIR101-2 microRNA mir-101-2 acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) MGI PMID:25959411 MGI:5705446 NCBI chr 1:93,194,328...93,194,382
Ensembl chr 1:93,194,309...93,194,399
JBrowse link
G MIR1185 microRNA mir-1185 acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) MGI PMID:25959411 MGI:5705446 NCBI chr 8:69,273,204...69,273,332
Ensembl chr 8:69,273,204...69,273,332
JBrowse link
G MIR125B-1 microRNA mir-125b-1 acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) MGI PMID:25959411 MGI:5705446 NCBI chr 5:12,097,672...12,097,732
Ensembl chr 5:12,097,658...12,097,745
JBrowse link
G MIR143 microRNA mir-143 acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) MGI PMID:25959411 MGI:5705446 NCBI chr 4:59,534,535...59,534,589
Ensembl chr 4:59,534,535...59,534,594
JBrowse link
G MIR148B microRNA mir-148b acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) MGI PMID:25959411 MGI:5705446 NCBI chr27:975,146...975,206
Ensembl chr27:975,131...975,220
JBrowse link
G MIR208A microRNA mir-208a acts_upstream_of_or_within ISO (MGI:3708230|PMID:17379774) MGI PMID:17379774 MGI:3708230 NCBI chr 8:3,636,919...3,636,987
Ensembl chr 8:3,636,919...3,636,987
JBrowse link
G MIR21 microRNA mir-21 ISO RGD PMID:27798620 RGD:41404703 NCBI chr 9:34,340,550...34,340,609
Ensembl chr 9:34,340,533...34,340,624
JBrowse link
G MIR214 microRNA mir-214 acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) MGI PMID:25959411 MGI:5705446 NCBI chr 7:26,818,559...26,818,668
Ensembl chr 7:26,818,559...26,818,670
JBrowse link
G MIR223 microRNA mir-223 ISO RGD PMID:23046980 RGD:25824946 NCBI chr  X:50,838,131...50,838,233
Ensembl chr  X:50,838,131...50,838,233
JBrowse link
G MIR26A-1 microRNA mir-26a-1 acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) MGI PMID:25959411 MGI:5705446 NCBI chr23:7,747,073...7,747,133
Ensembl chr23:7,747,064...7,747,140
JBrowse link
G MIR26A-2 microRNA mir-26a-2 acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) MGI PMID:25959411 MGI:5705446 NCBI chr10:1,880,513...1,880,572
Ensembl chr10:1,880,513...1,880,572
JBrowse link
G MIR301A microRNA mir-301a acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) MGI PMID:25959411 MGI:5705446 NCBI chr 9:33,724,572...33,724,655
Ensembl chr 9:33,724,571...33,724,655
JBrowse link
G MIR410 microRNA mir-410 acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) MGI PMID:25959411 MGI:5705446 NCBI chr 8:69,294,377...69,294,432 JBrowse link
G MIR652 microRNA mir-652 acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) MGI PMID:25959411 MGI:5705446 NCBI chr  X:83,271,857...83,271,919
Ensembl chr  X:83,271,857...83,271,919
JBrowse link
G MIR665 microRNA mir-665 acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) MGI PMID:25959411 MGI:5705446 NCBI chr 8:69,097,904...69,097,971 JBrowse link
G MIR92A-2 microRNA mir-92a-2 acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) MGI PMID:25959411 MGI:5705446 NCBI chr  X:104,895,826...104,895,886
Ensembl chr  X:104,895,826...104,895,886
JBrowse link
G MMP7 matrix metallopeptidase 7 ISO RGD PMID:20054150 RGD:8547898 NCBI chr 5:29,187,902...29,196,157
Ensembl chr 5:29,187,851...29,196,153
JBrowse link
G MTPN myotrophin ISO RGD PMID:12031792 RGD:1581046 NCBI chr16:12,316,487...12,369,148
Ensembl chr16:12,316,336...12,369,387
JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:7,901,578...7,905,274
Ensembl chr23:7,901,250...7,904,534
JBrowse link
G MYH9 myosin heavy chain 9 ISO RGD PMID:8888698 RGD:11533927 NCBI chr10:28,063,626...28,122,953
Ensembl chr10:28,063,624...28,122,953
JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr32:23,948,598...24,040,704
Ensembl chr32:23,942,954...24,040,703
JBrowse link
G NOS1 nitric oxide synthase 1 ISO RGD PMID:23619128 RGD:7257608 NCBI chr26:13,787,341...13,895,176
Ensembl chr26:13,786,309...13,962,332
JBrowse link
G NOS3 nitric oxide synthase 3 ISO RGD PMID:19673940 RGD:8693631 NCBI chr16:15,054,196...15,072,454
Ensembl chr16:15,011,344...15,072,277
JBrowse link
G NPPA natriuretic peptide A ISO RGD PMID:23617620 RGD:7297055 NCBI chr 2:84,406,317...84,408,115
Ensembl chr 2:84,396,073...84,408,385
JBrowse link
G NPPB natriuretic peptide B ISO RGD PMID:21812548 PMID:23617620 RGD:5685655 RGD:7297055 NCBI chr 2:84,395,844...84,397,473 JBrowse link
G PAX2 paired box 2 acts_upstream_of_or_within ISO (PMID:17164400) UniProt PMID:17164400 NCBI chr28:13,442,894...13,519,853
Ensembl chr28:13,442,893...13,532,094
JBrowse link
G PDE2A phosphodiesterase 2A involved_in ISS UniProt GO_REF:0000024 NCBI chr21:25,542,030...25,635,661
Ensembl chr21:25,542,268...25,635,660
JBrowse link
G PDGFB platelet derived growth factor subunit B ISO RGD PMID:7653578 RGD:10449502 NCBI chr10:25,798,877...25,819,422
Ensembl chr10:25,798,938...25,817,746
JBrowse link
G PIEZO1 piezo type mechanosensitive ion channel component 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:64,584,153...64,640,423
Ensembl chr 5:64,570,035...64,640,375
JBrowse link
G PIEZO2 piezo type mechanosensitive ion channel component 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:76,477,628...76,918,660
Ensembl chr 7:76,478,928...76,919,723
JBrowse link
G PLEC plectin involved_in ISO (MGI:5790023|PMID:26519478) MGI PMID:26519478 MGI:5790023 NCBI chr13:37,449,379...37,503,752
Ensembl chr13:37,450,248...37,513,523
JBrowse link
G PTGER4 prostaglandin E receptor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:14665434) Ensembl
Ensembl
UniProt
PMID:14665434 GO_REF:0000107 NCBI chr 4:68,663,362...68,676,241
Ensembl chr 4:68,663,364...68,676,358
JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:21051526 RGD:5135055 NCBI chr 7:19,668,079...19,674,903
Ensembl chr 7:19,668,082...19,674,903
JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 ISO RGD PMID:18757826 RGD:12743581 NCBI chr26:9,989,218...10,072,245
Ensembl chr26:9,989,425...10,067,481
JBrowse link
G RAC1 Rac family small GTPase 1 ISO RGD PMID:12105187 RGD:1299247 NCBI chr 6:11,726,259...11,758,532
Ensembl chr 6:11,655,494...11,757,216
JBrowse link
G RIPOR2 RHO family interacting cell polarization regulator 2 involved_in ISO (MGI:5789047|PMID:27269051) UniProt PMID:27269051 MGI:5789047 NCBI chr35:22,823,053...23,041,765
Ensembl chr35:22,824,106...23,041,743
JBrowse link
G SCX scleraxis bHLH transcription factor acts_upstream_of_or_within ISO (PMID:21625049) UniProt PMID:21625049 NCBI chr13:37,701,781...37,704,949
Ensembl chr13:37,703,232...37,704,657
JBrowse link
G SERPINE1 serpin family E member 1 ISO biaxial cyclic stretch RGD PMID:20054150 RGD:8547898 NCBI chr 6:8,719,547...8,727,160
Ensembl chr 6:8,720,825...8,726,301
JBrowse link
G SFTPB surfactant protein B ISO RGD PMID:12600831 RGD:4143475 NCBI chr17:39,419,305...39,428,513
Ensembl chr17:39,386,584...39,426,229
JBrowse link
G SFTPC surfactant protein C ISO RGD PMID:12600831 RGD:4143475 NCBI chr25:35,088,295...35,090,995
Ensembl chr25:35,088,279...35,091,457
JBrowse link
G SLC2A1 solute carrier family 2 member 1 ISO RGD PMID:19918242 RGD:12879501 NCBI chr15:463,307...493,145
Ensembl chr15:463,237...493,140
JBrowse link
G SLC38A2 solute carrier family 38 member 2 ISO RGD PMID:15288886 RGD:9999216 NCBI chr27:8,056,289...8,068,988
Ensembl chr27:8,018,880...8,066,331
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 9:8,275,049...8,278,172
Ensembl chr 9:8,275,049...8,278,172
JBrowse link
G TLR3 toll like receptor 3 involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr16:44,617,012...44,633,591
Ensembl chr16:44,550,846...44,653,247
JBrowse link
G TLR4 toll like receptor 4 involved_in ISO
IEA
RGD
Ensembl
PMID:20202224 GO_REF:0000107 RGD:4144075 NCBI chr11:71,356,390...71,367,166
Ensembl chr11:71,356,390...71,367,165
JBrowse link
G TLR5 toll like receptor 5 involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr38:23,700,323...23,705,628
Ensembl chr38:23,702,033...23,705,314
JBrowse link
G TLR7 toll like receptor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:9,331,243...9,360,461
Ensembl chr  X:9,314,815...9,359,603
JBrowse link
G TLR8 toll like receptor 8 involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr  X:9,381,159...9,399,938 JBrowse link
G TMEM150C transmembrane protein 150C involved_in ISO (MGI:5829325|PMID:27321926) UniProt PMID:27321926 MGI:5829325 NCBI chr32:6,465,047...6,552,492
Ensembl chr32:6,466,035...6,539,078
JBrowse link
G TNFRSF1A TNF receptor superfamily member 1A involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr27:38,641,837...38,654,693
Ensembl chr27:38,638,753...38,700,282
JBrowse link
G TNFRSF8 TNF receptor superfamily member 8 involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr 2:84,185,445...84,225,986
Ensembl chr 2:84,186,961...84,232,675
JBrowse link
G TNFSF14 TNF superfamily member 14 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr20:53,604,101...53,607,522
Ensembl chr20:53,603,709...53,607,522
JBrowse link
G VEGFA vascular endothelial growth factor A ISO RGD PMID:19012730 RGD:8662390 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965
JBrowse link
G WNT11 Wnt family member 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5705446|PMID:25959411) Ensembl
Ensembl
MGI
PMID:25959411 GO_REF:0000107 MGI:5705446 NCBI chr21:22,442,496...22,463,040
Ensembl chr21:22,446,051...22,463,173
JBrowse link
cellular response to menadione term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCPS decapping enzyme, scavenger involved_in ISO (PMID:16140270) UniProt PMID:16140270 NCBI chr 5:8,168,887...8,212,582
Ensembl chr 5:8,172,313...8,212,832
JBrowse link
G NDOR1 NADPH dependent diflavin oxidoreductase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:48,456,256...48,464,930
Ensembl chr 9:48,455,260...48,464,970
JBrowse link
cellular response to methionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:1201245 RGD:6893692 NCBI chr 4:3,219,851...3,328,000
Ensembl chr 4:3,215,090...3,328,115
JBrowse link
cellular response to nitrogen starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG5 autophagy related 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:63,565,859...63,692,383
Ensembl chr12:63,567,568...63,683,485
JBrowse link
G ATG7 autophagy related 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:6,916,354...7,154,849
Ensembl chr20:6,916,515...7,154,800
JBrowse link
G BECN2 beclin 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:33,318,124...33,356,388
Ensembl chr 7:33,317,730...33,350,325
JBrowse link
G GABARAP GABA type A receptor-associated protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:32,207,879...32,209,976
Ensembl chr 5:32,207,887...32,209,908
JBrowse link
G GABARAPL1 GABA type A receptor associated protein like 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr27:35,783,203...35,791,576
Ensembl chr27:35,782,330...35,791,569
JBrowse link
G GABARAPL2 GABA type A receptor associated protein like 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:75,230,214...75,240,724
Ensembl chr 5:75,230,243...75,240,730
JBrowse link
G MAP1LC3A microtubule associated protein 1 light chain 3 alpha involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:23,672,343...23,673,937
Ensembl chr24:23,633,579...23,673,921
JBrowse link
G MAP1LC3B microtubule associated protein 1 light chain 3 beta involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:65,669,553...65,683,445 JBrowse link
G MAP1LC3C microtubule associated protein 1 light chain 3 gamma involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:33,364,569...33,369,080
Ensembl chr 7:33,365,045...33,368,969
JBrowse link
G NPRL2 NPR2 like, GATOR1 complex subunit involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:39,005,699...39,009,183
Ensembl chr20:39,005,734...39,009,189
JBrowse link
cellular response to nutrient term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT2 acetyl-CoA acetyltransferase 2 ISO N-acetylcysteine RGD PMID:12563020 RGD:1598705 NCBI chr 1:49,011,665...49,029,368
Ensembl chr 1:49,011,706...49,029,327
JBrowse link
G CCNE1 cyclin E1 ISO RGD PMID:17979132 RGD:2289272 NCBI chr 1:121,688,622...121,697,533
Ensembl chr 1:121,688,796...121,697,649
JBrowse link
G CDKN2B cyclin dependent kinase inhibitor 2B involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr11:41,259,627...41,264,832 JBrowse link
G DBI diazepam binding inhibitor, acyl-CoA binding protein ISO RGD PMID:15825833 RGD:2316268 NCBI chr19:30,640,429...30,645,704
Ensembl chr19:30,640,429...30,646,405
JBrowse link
G HMOX1 heme oxygenase 1 ISO RGD PMID:15531134 RGD:1582714 NCBI chr10:28,744,404...28,751,544
Ensembl chr10:28,743,795...28,751,773
JBrowse link
G LPL lipoprotein lipase involved_in ISO (MGI:6282942|PMID:21986524) ARUK-UCL PMID:21986524 MGI:6282942 NCBI chr25:37,078,306...37,102,729
Ensembl chr25:37,079,756...37,102,700
JBrowse link
G PDK2 pyruvate dehydrogenase kinase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:26,099,457...26,116,094
Ensembl chr 9:26,100,343...26,115,423
JBrowse link
G PRDM4 PR/SET domain 4 ISO fetal calf serum RGD PMID:10485890 RGD:633619 NCBI chr10:31,071,998...31,100,008
Ensembl chr10:31,072,297...31,098,636
JBrowse link
G TNKS tankyrase ISO RGD PMID:25876076 RGD:13628743 NCBI chr16:34,826,248...35,040,004
Ensembl chr16:34,831,662...35,039,946
JBrowse link
G XBP1 X-box binding protein 1 involved_in ISO (MGI:4442277|PMID:20348926) UniProt PMID:20348926 MGI:4442277 NCBI chr26:22,162,675...22,168,149
Ensembl chr26:22,163,222...22,168,105
JBrowse link
cellular response to nutrient levels term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD68 CD68 molecule involved_in ISO (MGI:6274946|PMID:16157452) ARUK-UCL PMID:16157452 MGI:6274946 NCBI chr 5:32,500,899...32,503,355
Ensembl chr 5:32,501,380...32,503,183
JBrowse link
G EIF4G1 eukaryotic translation initiation factor 4 gamma 1 involved_in ISO (PMID:18426977) ParkinsonsUK-UCL PMID:18426977 NCBI chr34:17,194,588...17,214,498
Ensembl chr34:17,195,562...17,214,052
JBrowse link
G FAM107A family with sequence similarity 107 member A involved_in ISO (MGI:6162291|PMID:21969592) UniProt PMID:21969592 MGI:6162291 NCBI chr20:32,047,132...32,099,815
Ensembl chr20:32,047,625...32,097,585
JBrowse link
G ICAM1 intercellular adhesion molecule 1 ISO RGD PMID:20643106 RGD:4145376 NCBI chr20:50,818,715...50,827,914
Ensembl chr20:50,818,715...50,827,914
JBrowse link
G IL6 interleukin 6 ISO RGD PMID:23079940 RGD:11062063 NCBI chr14:36,474,268...36,478,519
Ensembl chr14:36,473,394...36,478,519
JBrowse link
G KCNB1 potassium voltage-gated channel subfamily B member 1 involved_in ISO PMID:19077057 UniProt PMID:19077057 RGD:10047372 NCBI chr24:36,016,800...36,118,873
Ensembl chr24:36,025,472...36,117,934
JBrowse link
G LCN2 lipocalin 2 ISO serum deprivation RGD PMID:17356516 RGD:2303047 NCBI chr 9:55,328,118...55,342,535
Ensembl chr 9:55,328,133...55,332,038
JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in ISO (MGI:5285135|PMID:21258367) UniProt PMID:21258367 MGI:5285135 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO (MGI:5285135|PMID:21258367)
(PMID:25412657), (PMID:30478170)
UniProt
ComplexPortal
PMID:21258367 PMID:25412657 PMID:30478170 MGI:5285135 NCBI chr 4:68,579,061...68,614,548
Ensembl chr 4:68,579,037...68,611,841
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in ISO (MGI:5285135|PMID:21258367)
(PMID:25412657)
UniProt
ComplexPortal
PMID:21258367 PMID:25412657 MGI:5285135 NCBI chr 5:52,809,792...52,855,072
Ensembl chr 5:52,815,609...52,876,609
JBrowse link
G PRKAB1 protein kinase AMP-activated non-catalytic subunit beta 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr26:15,706,583...15,716,612
Ensembl chr26:15,706,678...15,715,314
JBrowse link
G PRKAB2 protein kinase AMP-activated non-catalytic subunit beta 2 involved_in ISO (PMID:25412657) ComplexPortal PMID:25412657 NCBI chr17:57,614,499...57,630,041
Ensembl chr17:57,616,451...57,630,041
JBrowse link
G PRKAG1 protein kinase AMP-activated non-catalytic subunit gamma 1 involved_in ISO (PMID:25412657), (PMID:30478170) ComplexPortal PMID:25412657 PMID:30478170 NCBI chr27:5,556,433...5,570,675
Ensembl chr27:5,556,549...5,570,235
JBrowse link
G PRKAG3 protein kinase AMP-activated non-catalytic subunit gamma 3 involved_in ISO (PMID:25412657) ComplexPortal PMID:25412657 NCBI chr37:25,405,794...25,414,745
Ensembl chr37:25,406,190...25,414,961
JBrowse link
G RPTOR regulatory associated protein of MTOR complex 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:1,012,512...1,345,872
Ensembl chr 9:1,013,603...1,344,148
JBrowse link
G TXN2 thioredoxin 2 ISO Choline-deprived diet. RGD PMID:18578693 RGD:2306156 NCBI chr10:27,947,647...27,960,634
Ensembl chr10:27,948,571...27,959,910
JBrowse link
G UCN3 urocortin 3 involved_in IBA
ISO
(PMID:21873635)
High-fat diet
GO_Central
RGD
PMID:17360501 PMID:21873635 RGD:2306172 NCBI chr 2:30,541,316...30,547,839
Ensembl chr 2:30,541,779...30,542,282
JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 involved_in ISO (MGI:5285135|PMID:21258367) UniProt PMID:21258367 MGI:5285135 NCBI chr26:968,714...982,244
Ensembl chr26:970,138...982,229
JBrowse link
cellular response to oxygen-glucose deprivation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIFM1 apoptosis inducing factor mitochondria associated 1 ISO RGD PMID:14526224 RGD:10047409 NCBI chr  X:101,275,027...101,307,551
Ensembl chr  X:101,275,017...101,307,367
JBrowse link
G AQP3 aquaporin 3 acts_upstream_of_or_within ISO (MGI:5551666|PMID:24462679) MGI PMID:24462679 MGI:5551666 NCBI chr11:50,517,509...50,524,565 JBrowse link
G ATF4 activating transcription factor 4 ISO RGD PMID:20444431 RGD:13464322 NCBI chr10:25,528,880...25,531,018
Ensembl chr10:25,528,874...25,530,993
JBrowse link
G CACNB3 calcium voltage-gated channel auxiliary subunit beta 3 ISO RGD PMID:23421680 RGD:13514095 NCBI chr27:5,705,587...5,714,620
Ensembl chr27:5,706,064...5,717,647
JBrowse link
G CBL Cbl proto-oncogene ISO RGD PMID:24229686 RGD:11038824 NCBI chr 5:14,600,409...14,676,974
Ensembl chr 5:14,607,013...14,676,956
JBrowse link
G DICER1 dicer 1, ribonuclease III ISO RGD PMID:26294080 RGD:11553310 NCBI chr 8:63,970,245...64,029,438
Ensembl chr 8:63,972,027...64,019,879
JBrowse link
G DNM1L dynamin 1 like ISO RGD PMID:23658809 RGD:12738215 NCBI chr27:16,161,855...16,211,983
Ensembl chr27:16,163,357...16,211,957
JBrowse link
G IREB2 iron responsive element binding protein 2 ISO RGD PMID:16135072 RGD:12904046 NCBI chr13:38,398,445...38,441,128
Ensembl chr13:38,400,591...38,441,015
JBrowse link
G LCN2 lipocalin 2 ISO RGD PMID:24916903 RGD:126790489 NCBI chr 9:55,328,118...55,342,535
Ensembl chr 9:55,328,133...55,332,038
JBrowse link
G MFN1 mitofusin 1 ISO RGD PMID:23658809 RGD:12738215 NCBI chr34:12,785,799...12,816,881
Ensembl chr34:12,785,856...12,815,994
JBrowse link
G MFN2 mitofusin 2 ISO RGD PMID:23658809 RGD:12738215 NCBI chr 2:84,284,719...84,310,715
Ensembl chr 2:84,284,719...84,308,225
JBrowse link
G MIR107 microRNA mir-107 ISO RGD PMID:26294080 RGD:11553310 NCBI chr28:4,484,653...4,484,710
Ensembl chr28:4,484,646...4,484,718
JBrowse link
G MIR874 microRNA mir-874 acts_upstream_of_or_within ISO (MGI:5551666|PMID:24462679) MGI PMID:24462679 MGI:5551666 NCBI chr11:25,355,355...25,355,432
Ensembl chr11:25,355,354...25,355,437
JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase ISO RGD PMID:28528966 RGD:13781879 NCBI chr18:14,110,045...14,211,268
Ensembl chr18:13,993,022...14,208,657
JBrowse link
G PPP1R15A protein phosphatase 1 regulatory subunit 15A ISO RGD PMID:21525936 RGD:10054236 NCBI chr 1:107,486,399...107,490,151
Ensembl chr 1:107,486,438...107,489,222
JBrowse link
G TSC1 TSC complex subunit 1 involved_in ISO PMID:23435171 ParkinsonsUK-UCL PMID:23435171 RGD:10448950 NCBI chr 9:51,409,307...51,459,546
Ensembl chr 9:51,425,937...51,454,677
JBrowse link
cellular response to phosphate starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COMT catechol-O-methyltransferase acts_upstream_of_or_within ISO (MGI:5510279|PMID:23863468) MGI PMID:23863468 MGI:5510279 NCBI chr26:29,359,930...29,381,854
Ensembl chr26:29,360,356...29,366,008
JBrowse link
G SLC34A1 solute carrier family 34 member 1 involved_in ISO PMID:9058191 UniProt PMID:9058191 RGD:152025535 NCBI chr 4:35,961,394...35,973,733
Ensembl chr 4:35,961,958...35,973,657
JBrowse link
G XPR1 xenotropic and polytropic retrovirus receptor 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:14,165,608...14,379,822
Ensembl chr 7:14,165,608...14,379,822
JBrowse link
cellular response to potassium ion starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HRK harakiri, BCL2 interacting protein ISO RGD PMID:17428807 RGD:2290488 NCBI chr26:13,481,095...13,501,276 JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:17428807 RGD:2290488 NCBI chr 5:50,966,698...50,968,939 JBrowse link
G PCK1 phosphoenolpyruvate carboxykinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3851650|PMID:19458124) Ensembl
Ensembl
MGI
PMID:19458124 GO_REF:0000107 MGI:3851650 NCBI chr24:42,538,858...42,544,200
Ensembl chr24:42,538,882...42,544,198
JBrowse link
G SLC38A3 solute carrier family 38 member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3851650|PMID:19458124) Ensembl
Ensembl
MGI
PMID:19458124 GO_REF:0000107 MGI:3851650 NCBI chr20:39,108,387...39,122,526
Ensembl chr20:39,109,211...39,114,849
JBrowse link
cellular response to starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1C3 aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II) involved_in ISO (PMID:18641923) UniProt PMID:18641923 NCBI chr 2:30,661,333...30,691,283
Ensembl chr 2:30,674,558...30,690,043
JBrowse link
G ALB albumin involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr13:62,133,747...62,169,349
Ensembl chr13:62,053,814...62,294,709
JBrowse link
G AMBRA1 autophagy and beclin 1 regulator 1 ISO RGD PMID:25117440 RGD:11552604 NCBI chr18:42,903,815...43,073,918
Ensembl chr18:42,932,513...43,072,827
JBrowse link
G ATG14 autophagy related 14 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:31,199,097...31,234,200
Ensembl chr 8:31,201,709...31,234,217
JBrowse link
G ATG4B autophagy related 4B cysteine peptidase involved_in ISO (MGI:5630037|PMID:25578879) ParkinsonsUK-UCL PMID:25578879 MGI:5630037 NCBI chr25:51,494,316...51,518,683
Ensembl chr25:51,504,537...51,517,659
JBrowse link
G ATG5 autophagy related 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5494529|PMID:22496425) MGI
Ensembl
PMID:22496425 GO_REF:0000107 MGI:5494529 NCBI chr12:63,565,859...63,692,383
Ensembl chr12:63,567,568...63,683,485
JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within
involved_in
ISO (MGI:5494529|PMID:22496425)
(PMID:20543840)
MGI
UniProt
PMID:20543840 PMID:22496425 MGI:5494529 NCBI chr20:6,916,354...7,154,849
Ensembl chr20:6,916,515...7,154,800
JBrowse link
G BMF Bcl2 modifying factor involved_in ISO (MGI:5490676|PMID:23629966) CAFA PMID:23629966 MGI:5490676 NCBI chr30:7,301,000...7,321,949
Ensembl chr30:7,274,174...7,322,034
JBrowse link
G BMPR2 bone morphogenetic protein receptor type 2 involved_in ISO (PMID:15657086) BHF-UCL PMID:15657086 NCBI chr37:11,342,292...11,540,199
Ensembl chr37:11,342,384...11,533,024
JBrowse link
G CADPS2 calcium dependent secretion activator 2 acts_upstream_of_or_within ISO (MGI:5468191|PMID:23260145) MGI PMID:23260145 MGI:5468191 NCBI chr14:60,109,253...60,465,982
Ensembl chr14:60,107,538...60,556,817
JBrowse link
G CARTPT CART prepropeptide involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
InterPro
PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr 2:54,865,043...54,867,410
Ensembl chr 2:54,865,298...54,867,158
JBrowse link
G CAV1 caveolin 1 involved_in ISO (PMID:15657086) BHF-UCL PMID:15657086 NCBI chr14:55,458,934...55,494,563
Ensembl chr14:55,461,048...55,492,935
JBrowse link
G CLEC16A C-type lectin domain containing 16A involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:31,560,940...31,757,100
Ensembl chr 6:31,562,834...31,757,678
JBrowse link
G CTSL3 cathepsin L family member 3 ISO serum and potassium deprivation RGD PMID:16176344 RGD:2315590 NCBI chr 1:72,215,774...72,219,093 JBrowse link
G DNAJC15 DnaJ heat shock protein family (Hsp40) member C15 acts_upstream_of_or_within ISO (MGI:5529421|PMID:23530063) MGI PMID:23530063 MGI:5529421 NCBI chr22:7,746,726...7,825,635 JBrowse link
G DSC2 desmocollin 2 acts_upstream_of_or_within ISO (MGI:5468191|PMID:23260145) MGI PMID:23260145 MGI:5468191 NCBI chr 7:58,369,316...58,402,028
Ensembl chr 7:58,322,959...58,457,978
JBrowse link
G EHMT2 euchromatic histone lysine methyltransferase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23918802) MGI
Ensembl
PMID:23918802 GO_REF:0000107 NCBI chr12:1,341,202...1,354,602
Ensembl chr12:1,341,191...1,354,584
JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 acts_upstream_of_or_within ISO (MGI:3589702|PMID:15937339) MGI PMID:15937339 MGI:3589702 NCBI chr30:7,144,727...7,248,014
Ensembl chr30:7,144,570...7,248,000
JBrowse link
G ELAPOR1 endosome-lysosome associated apoptosis and autophagy regulator 1 involved_in ISO (PMID:21072319) BHF-UCL PMID:21072319 NCBI chr 6:42,612,130...42,681,161
Ensembl chr 6:42,613,546...42,681,015
JBrowse link
G FADS1 fatty acid desaturase 1 involved_in ISO (PMID:10601301) UniProt PMID:10601301 NCBI chr18:54,659,406...54,672,803
Ensembl chr18:54,659,406...54,670,623
JBrowse link
G FBXO22 F-box protein 22 acts_upstream_of_or_within ISO (MGI:3840749|PMID:19319192) MGI PMID:19319192 MGI:3840749 NCBI chr30:40,100,768...40,127,708
Ensembl chr30:40,101,540...40,189,159
JBrowse link
G FLCN folliculin involved_in ISO (PMID:24095279), (PMID:31672913) UniProt PMID:24095279 PMID:31672913 NCBI chr 5:42,176,093...42,195,718
Ensembl chr 5:42,176,291...42,195,711
JBrowse link
G FNIP1 folliculin interacting protein 1 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:5436190|PMID:22608497) UniProt
Ensembl
MGI
PMID:22608497 GO_REF:0000024 GO_REF:0000107 MGI:5436190 NCBI chr11:19,979,294...20,134,341
Ensembl chr11:19,979,163...20,134,229
JBrowse link
G FOXA3 forkhead box A3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2153289|PMID:11546810) Ensembl
Ensembl
MGI
PMID:11546810 GO_REF:0000107 MGI:2153289 NCBI chr 1:109,749,142...109,757,149
Ensembl chr 1:109,748,926...109,757,006
JBrowse link
G FOXO1 forkhead box O1 involved_in ISO (PMID:20543840) UniProt PMID:20543840 NCBI chr25:603,433...706,961
Ensembl chr25:603,543...702,825
JBrowse link
G GAS2L1 growth arrest specific 2 like 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr26:22,615,531...22,620,605
Ensembl chr26:22,615,319...22,621,311
JBrowse link
G GAS6 growth arrest specific 6 acts_upstream_of_or_within ISO (MGI:1861137|PMID:8336730) MGI PMID:8336730 MGI:1861137 NCBI chr22:60,975,196...61,005,869
Ensembl chr22:60,974,849...61,005,875
JBrowse link
G GBA1 glucosylceramidase beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:42,317,704...42,322,285
Ensembl chr 7:42,317,862...42,322,864
JBrowse link
G GCGR glucagon receptor acts_upstream_of_or_within ISO (MGI:5474727|PMID:23209793) ARUK-UCL PMID:23209793 MGI:5474727 NCBI chr 9:455,744...463,070
Ensembl chr 9:344,438...459,925
JBrowse link
G GLUL glutamate-ammonia ligase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5468191|PMID:23260145) MGI
Ensembl
Ensembl
PMID:23260145 GO_REF:0000107 MGI:5468191 NCBI chr 7:15,730,898...15,740,241
Ensembl chr 7:15,730,898...15,740,241
JBrowse link
G INHBB inhibin subunit beta B acts_upstream_of_or_within ISO (PMID:19491194) UniProt PMID:19491194 NCBI chr19:29,765,697...29,768,485
Ensembl chr19:29,767,682...29,768,077
JBrowse link
G JMY junction mediating and regulatory protein, p53 cofactor involved_in ISO (PMID:30420355) UniProt PMID:30420355 NCBI chr 3:27,545,682...27,646,449
Ensembl chr 3:27,544,132...27,646,814
JBrowse link
G KLF10 KLF transcription factor 10 involved_in ISO (MGI:4438787|PMID:20070857) UniProt PMID:20070857 MGI:4438787 NCBI chr13:4,216,745...4,223,708
Ensembl chr13:4,218,084...4,223,691
JBrowse link
G KRT20 keratin 20 involved_in ISO (MGI:3759335|PMID:16608857) UniProt PMID:16608857 MGI:3759335 NCBI chr 9:21,808,171...21,818,301
Ensembl chr 9:21,808,548...21,817,387
JBrowse link
G LAMP2 lysosomal associated membrane protein 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr  X:92,405,946...92,444,527
Ensembl chr  X:92,407,950...92,444,765
JBrowse link
G LRRK2 leucine rich repeat kinase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr27:13,282,824...13,420,917
Ensembl chr27:13,283,756...13,420,870
JBrowse link
G MAP1LC3A microtubule associated protein 1 light chain 3 alpha involved_in ISO (PMID:28223137) UniProt PMID:28223137 NCBI chr24:23,672,343...23,673,937
Ensembl chr24:23,633,579...23,673,921
JBrowse link
G MAP1LC3B microtubule associated protein 1 light chain 3 beta involved_in ISO (PMID:28223137), (PMID:30420355) UniProt PMID:28223137 PMID:30420355 NCBI chr 5:65,669,553...65,683,445 JBrowse link
G MAP1LC3C microtubule associated protein 1 light chain 3 gamma involved_in ISO (PMID:28223137) UniProt PMID:28223137 NCBI chr 7:33,364,569...33,369,080
Ensembl chr 7:33,365,045...33,368,969
JBrowse link
G MARS1 methionyl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:1,588,503...1,606,752
Ensembl chr10:1,588,875...1,606,750
JBrowse link
G MAX MYC associated factor X ISO serum deprivation RGD PMID:10446908 RGD:2316822 NCBI chr 8:39,441,216...39,465,703
Ensembl chr 8:39,380,686...39,465,959
JBrowse link
G MFSD2A major facilitator superfamily domain containing 2A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5474727|PMID:23209793) Ensembl
Ensembl
ARUK-UCL
PMID:23209793 GO_REF:0000107 MGI:5474727 NCBI chr15:2,966,433...2,979,030
Ensembl chr15:2,966,461...2,978,968
JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in ISO (PMID:22343943), (PMID:22576015), (PMID:22692423), (PMID:28223137) UniProt PMID:22343943 PMID:22576015 PMID:22692423 PMID:28223137 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114
JBrowse link
G MYH13 myosin heavy chain 13 acts_upstream_of_or_within ISO (MGI:3840749|PMID:19319192) MGI PMID:19319192 MGI:3840749 NCBI chr 5:34,617,987...34,669,349
Ensembl chr 5:34,617,971...34,669,589
JBrowse link
G MYOD1 myogenic differentiation 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3840749|PMID:19319192) Ensembl
Ensembl
MGI
PMID:19319192 GO_REF:0000107 MGI:3840749 NCBI chr21:40,257,792...40,260,461
Ensembl chr21:40,258,027...40,259,712
JBrowse link
G NUPR2 nuclear protein 2, transcriptional regulator involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:589,882...590,763
Ensembl chr 6:590,410...590,706
JBrowse link
G PCSK9 proprotein convertase subtilisin/kexin type 9 involved_in ISO PMID:16407292
(MGI:3700436|PMID:16407292)
HGNC-UCL PMID:16407292 MGI:3700436 RGD:8553473 NCBI chr 5:54,197,211...54,210,724 JBrowse link
G PDK4 pyruvate dehydrogenase kinase 4 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr14:20,825,861...20,839,290
Ensembl chr14:20,827,831...20,839,256
JBrowse link
G PIK3C2A phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha acts_upstream_of_or_within ISO (MGI:5565574|PMID:24098492) MGI PMID:24098492 MGI:5565574 NCBI chr21:39,693,211...39,868,603
Ensembl chr21:39,695,520...39,784,639
JBrowse link
G PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta acts_upstream_of_or_within ISO (MGI:5565574|PMID:24098492) MGI PMID:24098492 MGI:5565574 NCBI chr38:974,248...1,016,226
Ensembl chr38:975,749...1,027,679
JBrowse link
G PIK3C3 phosphatidylinositol 3-kinase catalytic subunit type 3 acts_upstream_of_or_within ISO (MGI:5565574|PMID:24098492) MGI PMID:24098492 MGI:5565574 NCBI chr 7:48,663,381...48,800,350
Ensembl chr 7:48,663,381...48,800,437
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha involved_in ISO (MGI:5474727|PMID:23209793) ARUK-UCL PMID:23209793 MGI:5474727 NCBI chr10:19,934,020...20,006,096
Ensembl chr10:19,934,165...20,006,146
JBrowse link
G PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D ISO RGD PMID:23520533 RGD:8693590 NCBI chr 9:35,856,277...35,914,096
Ensembl chr 9:35,856,765...35,913,884
JBrowse link
G PRAF2 PRA1 domain family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:42,218,038...42,221,075
Ensembl chr  X:42,218,046...42,226,422
JBrowse link
G RALB RAS like proto-oncogene B involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr19:29,820,006...29,868,345
Ensembl chr19:29,768,359...29,868,335
JBrowse link
G RIPOR1 RHO family interacting cell polarization regulator 1 involved_in ISO (PMID:27807006) UniProt PMID:27807006 NCBI chr 5:81,879,359...81,888,613
Ensembl chr 5:81,879,652...81,887,650
JBrowse link
G RNASE4 ribonuclease, RNase A family, 4 acts_upstream_of_or_within ISO (MGI:5468191|PMID:23260145) MGI PMID:23260145 MGI:5468191 NCBI chr15:17,981,661...17,998,644
Ensembl chr15:17,981,647...18,004,631
JBrowse link
G RPTOR regulatory associated protein of MTOR complex 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:1,012,512...1,345,872
Ensembl chr 9:1,013,603...1,344,148
JBrowse link
G RRAGB Ras related GTP binding B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:47,323,427...47,361,551
Ensembl chr  X:47,323,269...47,361,138
JBrowse link
G RRAGC Ras related GTP binding C involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:3,875,193...3,892,501
Ensembl chr15:3,874,116...3,892,504
JBrowse link
G RRAGD Ras related GTP binding D involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:48,583,350...48,625,032
Ensembl chr12:48,585,937...48,625,130
JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in ISO (PMID:11932307), (PMID:9724099) UniProt PMID:9724099 PMID:11932307 NCBI chr16:24,262,451...24,306,162
Ensembl chr16:24,261,946...24,302,964
JBrowse link
G SIRT1 sirtuin 1 involved_in ISO (MGI:3045940|PMID:15175761) BHF-UCL PMID:15175761 MGI:3045940 NCBI chr 4:19,188,616...19,220,031
Ensembl chr 4:19,188,675...19,218,279
JBrowse link
G SPHK1 sphingosine kinase 1 ISO RGD PMID:16959847 RGD:2311370 NCBI chr 9:4,311,698...4,314,773
Ensembl chr 9:4,311,683...4,314,483
JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 ISO serum-free culture RGD PMID:9729333 RGD:1600064 NCBI chr34:7,118,814...7,144,828
Ensembl chr34:7,118,814...7,144,828
JBrowse link
G SREBF1 sterol regulatory element binding transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:41,663,809...41,686,764
Ensembl chr 5:41,663,773...41,686,776
JBrowse link
G SREBF2 sterol regulatory element binding transcription factor 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr10:23,451,923...23,532,765
Ensembl chr10:23,452,561...23,518,689
Ensembl chr10:23,452,561...23,518,689
JBrowse link
G STK24 serine/threonine kinase 24 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:48,578,037...48,651,028
Ensembl chr22:48,578,858...48,663,329
JBrowse link
G STK26 serine/threonine kinase 26 involved_in ISO (PMID:27807006) UniProt PMID:27807006 NCBI chr  X:102,962,012...103,026,278
Ensembl chr  X:102,961,648...103,024,503
JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (MGI:5468191|PMID:23260145) MGI PMID:23260145 MGI:5468191 NCBI chr28:23,966,079...24,162,775
Ensembl chr28:23,966,073...24,163,737
JBrowse link
G TFEB transcription factor EB involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:10,367,979...10,423,478
Ensembl chr12:10,368,599...10,452,619
JBrowse link
G TNRC6A trinucleotide repeat containing adaptor 6A acts_upstream_of_or_within ISO (MGI:3510094|PMID:15494374) MGI PMID:15494374 MGI:3510094 NCBI chr 6:21,247,492...21,454,424
Ensembl chr 6:21,248,948...21,420,719
JBrowse link
G TTC5 tetratricopeptide repeat domain 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:17,653,008...17,670,231
Ensembl chr15:17,638,462...17,670,575
JBrowse link
G USP33 ubiquitin specific peptidase 33 involved_in ISO (PMID:24056301) UniProt PMID:24056301 NCBI chr 6:69,118,953...69,170,864
Ensembl chr 6:69,118,333...69,169,966
JBrowse link
G VPS41 VPS41 subunit of HOPS complex involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:10,788,846...10,956,207
Ensembl chr18:10,788,891...10,955,645
JBrowse link
G WDR45 WD repeat domain 45 involved_in ISO (PMID:28561066) UniProt PMID:28561066 NCBI chr  X:42,221,261...42,237,535
Ensembl chr  X:42,218,046...42,226,422
JBrowse link
G WDR45B WD repeat domain 45B involved_in ISO (PMID:28561066) UniProt PMID:28561066
G WIPI1 WD repeat domain, phosphoinositide interacting 1 involved_in ISO (PMID:28561066) UniProt PMID:28561066 NCBI chr 9:15,115,098...15,147,893
Ensembl chr 9:15,115,315...15,149,147
JBrowse link
G WIPI2 WD repeat domain, phosphoinositide interacting 2 involved_in ISO (PMID:28561066) UniProt PMID:28561066 NCBI chr 6:12,656,469...12,698,623
Ensembl chr 6:12,658,239...12,698,734
JBrowse link
G WNT2B Wnt family member 2B acts_upstream_of_or_within ISO (MGI:5468191|PMID:23260145) MGI PMID:23260145 MGI:5468191 NCBI chr17:63,034,719...63,054,369
Ensembl chr17:63,035,883...63,047,956
JBrowse link
G WNT4 Wnt family member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5468191|PMID:23260145) MGI
Ensembl
PMID:23260145 GO_REF:0000107 MGI:5468191 NCBI chr 2:77,112,045...77,129,702
Ensembl chr 2:77,101,300...77,127,111
JBrowse link
G WNT9B Wnt family member 9B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5468191|PMID:23260145) Ensembl
MGI
PMID:23260145 GO_REF:0000107 MGI:5468191 NCBI chr 9:10,157,607...10,172,664
Ensembl chr 9:10,149,842...10,172,654
JBrowse link
G WRN WRN RecQ like helicase acts_upstream_of_or_within ISO (PMID:11420665) MGI PMID:11420665 NCBI chr16:33,164,662...33,304,466
Ensembl chr16:33,167,364...33,304,625
JBrowse link
G ZFYVE1 zinc finger FYVE-type containing 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 8:46,353,489...46,407,912
Ensembl chr 8:46,353,761...46,406,038
JBrowse link
cellular response to vitamin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRIP1 BRCA1 interacting helicase 1 ISO RGD PMID:16771696 RGD:2326085 NCBI chr 9:34,804,285...34,984,640
Ensembl chr 9:34,806,535...34,983,788
JBrowse link
cellular response to vitamin A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LTC4S leukotriene C4 synthase ISO RGD PMID:12767051 RGD:724432 NCBI chr11:1,893,927...1,897,028
Ensembl chr11:1,894,380...1,897,752
JBrowse link
cellular response to vitamin B1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MDM2 MDM2 proto-oncogene ISO RGD PMID:15656374 RGD:2317394 NCBI chr10:10,936,288...10,963,118
Ensembl chr10:10,893,719...10,962,596
JBrowse link
cellular response to vitamin B3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIRT1 sirtuin 1 ISO RGD PMID:23555824 RGD:10047117 NCBI chr 4:19,188,616...19,220,031
Ensembl chr 4:19,188,675...19,218,279
JBrowse link
cellular response to vitamin D term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif 1 ISO RGD PMID:11108265 RGD:9681746 NCBI chr31:22,169,821...22,178,879
Ensembl chr31:22,170,381...22,178,945
JBrowse link
G ATP2B1 ATPase plasma membrane Ca2+ transporting 1 ISO RGD PMID:11277270 RGD:2317730 NCBI chr15:30,547,009...30,674,094
Ensembl chr15:30,547,015...30,616,429
JBrowse link
G BGLAP bone gamma-carboxyglutamate protein ISO RGD PMID:3257212 PMID:6607920 RGD:2316174 RGD:6483560 NCBI chr 7:41,630,092...41,630,976
Ensembl chr 7:41,630,098...41,665,791
JBrowse link
G CASR calcium sensing receptor ISO 1,25-dihydroxycholecalciferol (calcitriol) RGD PMID:21940515 RGD:7205697 NCBI chr33:25,340,822...25,432,814
Ensembl chr33:25,405,846...25,432,559
JBrowse link
G CYP24A1 cytochrome P450 family 24 subfamily A member 1 ISO RGD PMID:28104492 RGD:151665513 NCBI chr24:39,861,018...39,878,161
Ensembl chr24:39,862,355...39,878,216
JBrowse link
G FES FES proto-oncogene, tyrosine kinase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 3:53,346,975...53,356,547
Ensembl chr 3:53,347,012...53,356,516
JBrowse link
G FGF23 fibroblast growth factor 23 ISO RGD PMID:23263654 RGD:10044209 NCBI chr27:40,501,655...40,511,785
Ensembl chr27:40,501,731...40,509,766
JBrowse link
G FZD1 frizzled class receptor 1 ISO RGD PMID:1334084 RGD:61590 NCBI chr14:17,046,911...17,050,515
Ensembl chr14:17,047,382...17,049,337
JBrowse link
G FZD2 frizzled class receptor 2 ISO RGD PMID:1334084 RGD:61590 NCBI chr 9:18,888,711...18,890,549
Ensembl chr 9:18,888,696...18,890,525
JBrowse link
G GDAP1 ganglioside induced differentiation associated protein 1 ISO RGD PMID:25449168 RGD:12738378 NCBI chr29:22,805,468...22,835,909
Ensembl chr29:22,804,965...22,833,069
JBrowse link
G IL15 interleukin 15 ISO RGD PMID:15637289 RGD:2311387 NCBI chr19:1,339,607...1,364,762
Ensembl chr19:1,339,967...1,364,762
JBrowse link
G ITGB1 integrin subunit beta 1 ISO calcitriol RGD PMID:20304064 RGD:2325261 NCBI chr 2:3,728,472...3,757,696
Ensembl chr 2:3,670,596...3,756,961
JBrowse link
G KDM6A lysine demethylase 6A ISO RGD PMID:31907922 RGD:151665135 NCBI chr  X:38,745,854...38,964,029
Ensembl chr  X:38,745,854...38,959,842
JBrowse link
G LTBP1 latent transforming growth factor beta binding protein 1 ISO RGD PMID:10025676 RGD:10412059 NCBI chr17:26,129,528...26,521,782
Ensembl chr17:26,130,781...26,521,779
JBrowse link
G MIR125B-1 microRNA mir-125b-1 involved_in ISO (PMID:28389358) ARUK-UCL PMID:28389358 NCBI chr 5:12,097,672...12,097,732
Ensembl chr 5:12,097,658...12,097,745
JBrowse link
G MIR125B-2 microRNA mir-125b-2 involved_in ISO (PMID:28389358) ARUK-UCL PMID:28389358 NCBI chr31:13,304,980...13,305,040
Ensembl chr31:13,304,964...13,305,052
JBrowse link
G MMP1 matrix metallopeptidase 1 ISO RGD PMID:22064970 RGD:7207281 NCBI chr 5:28,978,385...28,986,644
Ensembl chr 5:28,978,473...28,986,648
JBrowse link
G NOS2 nitric oxide synthase 2 ISO RGD PMID:18534083 RGD:4891908 NCBI chr 9:42,171,821...42,210,217
Ensembl chr 9:42,171,821...42,208,588
JBrowse link
G PDIA3 protein disulfide isomerase family A member 3 ISO RGD PMID:15862831 RGD:9999173 NCBI chr30:10,487,926...10,513,437
Ensembl chr30:10,487,921...10,513,397
JBrowse link
G PENK proenkephalin ISO RGD PMID:8584038 RGD:10003035 NCBI chr29:7,757,543...7,763,137
Ensembl chr29:7,757,857...7,762,398
JBrowse link
G PHEX phosphate regulating endopeptidase X-linked ISO RGD PMID:15337762 RGD:11556251 NCBI chr  X:17,830,714...18,038,755
Ensembl chr  X:17,829,158...18,035,775
JBrowse link
G PTN pleiotrophin ISO RGD PMID:21153232 RGD:9831436 NCBI chr16:11,283,078...11,382,820
Ensembl chr16:11,283,077...11,382,814
JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in ISO (PMID:16149051) UniProt PMID:16149051 NCBI chr16:24,262,451...24,306,162
Ensembl chr16:24,261,946...24,302,964
JBrowse link
G TNC tenascin C ISO RGD PMID:10502285 RGD:4889620 NCBI chr11:69,077,532...69,169,673
Ensembl chr11:69,077,535...69,170,281
JBrowse link
G TREM1 triggering receptor expressed on myeloid cells 1 ISO RGD PMID:29331667 RGD:127284861 NCBI chr12:9,990,678...10,000,195
Ensembl chr12:9,990,679...10,000,236
JBrowse link
G VDR vitamin D receptor ISO RGD PMID:9753201 RGD:8158092 NCBI chr27:6,852,915...6,909,466
Ensembl chr27:6,852,723...6,909,470
JBrowse link
cellular response to vitamin E term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL1A1 collagen type I alpha 1 chain ISO RGD PMID:23722449 RGD:8552711 NCBI chr 9:26,183,852...26,199,927
Ensembl chr 9:26,183,852...26,199,927
JBrowse link
G COL2A1 collagen type II alpha 1 chain ISO RGD PMID:23722449 RGD:8552711 NCBI chr27:6,756,994...6,787,733
Ensembl chr27:6,756,994...6,787,733
JBrowse link
G PAWR pro-apoptotic WT1 regulator ISO RGD PMID:10428045 RGD:9835341 NCBI chr15:22,114,014...22,159,287 JBrowse link
G PPARG peroxisome proliferator activated receptor gamma ISO RGD PMID:11752099 RGD:8553036 NCBI chr20:6,134,618...6,265,481
Ensembl chr20:6,050,357...6,207,981
JBrowse link
cellular response to vitamin K term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL5 C-C motif chemokine ligand 5 ISO menadione (K3) RGD PMID:19291322 RGD:4889997 NCBI chr 9:37,817,409...37,823,852
Ensembl chr 9:37,817,305...37,823,852
JBrowse link
G GAS6 growth arrest specific 6 involved_in ISO (PMID:16359517) UniProt PMID:16359517 NCBI chr22:60,975,196...61,005,869
Ensembl chr22:60,974,849...61,005,875
JBrowse link
G POSTN periostin involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr25:3,167,319...3,208,970
Ensembl chr25:3,167,359...3,208,411
JBrowse link
cellular response to water deprivation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP2 aquaporin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1328377|PMID:10191086) Ensembl
Ensembl
MGI
RGD
PMID:10191086 PMID:15196935 GO_REF:0000107 MGI:1328377 RGD:2313141 NCBI chr27:4,743,127...4,750,907
Ensembl chr27:4,743,127...4,750,907
JBrowse link
G AVPR1A arginine vasopressin receptor 1A ISO RGD PMID:11796498 RGD:70387 NCBI chr10:6,266,217...6,269,662
Ensembl chr10:6,265,998...6,269,662
JBrowse link
G SIPA1 signal-induced proliferation-associated 1 ISO RGD PMID:15196935 RGD:2313141 NCBI chr18:51,560,551...51,571,291
Ensembl chr18:51,560,551...51,568,885
JBrowse link
cellular response to zinc ion starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACP5 acid phosphatase 5, tartrate resistant ISO RGD PMID:21893222 RGD:151667428 NCBI chr20:49,812,444...49,816,262
Ensembl chr20:49,814,032...49,816,260
JBrowse link
G BGLAP bone gamma-carboxyglutamate protein ISO RGD PMID:21893222 RGD:151667428 NCBI chr 7:41,630,092...41,630,976
Ensembl chr 7:41,630,098...41,665,791
JBrowse link
G CTNNB1 catenin beta 1 ISO RGD PMID:21893222 RGD:151667428 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927
JBrowse link
G CTSK cathepsin K ISO RGD PMID:21893222 RGD:151667428 NCBI chr17:59,928,725...59,938,293
Ensembl chr17:59,929,287...59,938,507
JBrowse link
G DLX5 distal-less homeobox 5 ISO RGD PMID:21893222 RGD:151667428 NCBI chr14:22,080,351...22,085,188
Ensembl chr14:22,080,699...22,084,867
JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:21893222 RGD:151667428 NCBI chr 8:48,330,856...48,334,273
Ensembl chr 8:48,331,026...48,333,467
JBrowse link
G IGF1 insulin like growth factor 1 ISO RGD PMID:21893222 RGD:151667428 NCBI chr15:41,203,320...41,275,964
Ensembl chr15:41,202,518...41,275,794
JBrowse link
G IGF1R insulin like growth factor 1 receptor ISO RGD PMID:21893222 RGD:151667428 NCBI chr 3:41,795,337...42,096,255
Ensembl chr 3:41,794,623...42,090,387
JBrowse link
G INSR insulin receptor ISO RGD PMID:21893222 RGD:151667428 NCBI chr20:52,017,261...52,136,061
Ensembl chr20:52,021,887...52,136,046
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:21893222 RGD:151667428 NCBI chr 5:50,966,698...50,968,939 JBrowse link
G MITF melanocyte inducing transcription factor ISO RGD PMID:21893222 RGD:151667428 NCBI chr20:21,772,147...21,873,545
Ensembl chr20:21,612,927...21,870,578
JBrowse link
G RUNX2 RUNX family transcription factor 2 ISO RGD PMID:21893222 RGD:151667428 NCBI chr12:13,723,535...13,842,565
Ensembl chr12:13,628,539...13,840,785
Ensembl chr12:13,628,539...13,840,785
JBrowse link
G SLC39A4 solute carrier family 39 member 4 acts_upstream_of_or_within ISO (MGI:3522410|PMID:15358787) MGI PMID:15358787 MGI:3522410 NCBI chr13:37,833,073...37,838,304
Ensembl chr13:37,833,156...37,838,522
JBrowse link
G SLC39A5 solute carrier family 39 member 5 acts_upstream_of_or_within ISO (MGI:3522410|PMID:15358787) MGI PMID:15358787 MGI:3522410 NCBI chr10:552,755...557,319 JBrowse link
G SP1 Sp1 transcription factor ISO RGD PMID:21893222 RGD:151667428 NCBI chr27:1,802,587...1,861,187
Ensembl chr27:1,805,184...1,847,226
JBrowse link
G SP7 Sp7 transcription factor ISO RGD PMID:21893222 RGD:151667428 NCBI chr27:1,878,612...1,887,063
Ensembl chr27:1,880,424...1,887,679
JBrowse link
G TNFRSF11A TNF receptor superfamily member 11a ISO RGD PMID:21893222 RGD:151667428 NCBI chr 1:14,504,595...14,555,956
Ensembl chr 1:14,503,033...14,556,041
JBrowse link
DNA protection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in ISO (PMID:24534463) BHF-UCL PMID:24534463 NCBI chr31:37,230,900...37,247,170 JBrowse link
G DCTPP1 dCTP pyrophosphatase 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000104 NCBI chr 6:17,679,681...17,683,644
Ensembl chr 6:17,679,722...17,683,570
JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor ISO RGD PMID:31644904 RGD:126925983 NCBI chr28:1,358,383...1,432,276
Ensembl chr28:1,361,107...1,427,162
JBrowse link
G NUDT1 nudix hydrolase 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
GO_Central
Ensembl
PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr 6:14,874,459...14,881,517
Ensembl chr 6:14,859,518...14,882,704
JBrowse link
G NUDT15 nudix hydrolase 15 involved_in
NOT|involved_in
IEA
ISO
(PMID:26238318) Ensembl
UniProt
PMID:26238318 GO_REF:0000107 NCBI chr22:3,416,702...3,424,607
Ensembl chr22:3,416,578...3,424,409
JBrowse link
negative regulation of transcription from RNA polymerase II promoter by glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXA2 forkhead box A2 involved_in ISO (MGI:5142372|PMID:11875061) BHF-UCL PMID:11875061 MGI:5142372 NCBI chr24:1,010,370...1,013,791
Ensembl chr24:1,010,651...1,013,072
JBrowse link
negative regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KANK2 KN motif and ankyrin repeat domains 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr20:50,067,749...50,093,377
Ensembl chr20:50,067,760...50,091,320
JBrowse link
G SNAI2 snail family transcriptional repressor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:1,154,132...1,156,653
Ensembl chr29:1,154,036...1,156,653
JBrowse link
positive regulation of transcription by glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SRF serum response factor ISO RGD PMID:20655308 RGD:5131625 NCBI chr12:11,664,441...11,673,846
Ensembl chr12:11,664,527...11,671,533
JBrowse link
positive regulation of transcription from RNA polymerase II promoter by galactose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NCOA1 nuclear receptor coactivator 1 involved_in ISO (PMID:10207113) UniProt PMID:10207113 NCBI chr17:18,880,676...19,124,300
Ensembl chr17:18,880,383...19,122,258
JBrowse link
positive regulation of transcription from RNA polymerase II promoter by glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXA2 forkhead box A2 involved_in ISO (MGI:5142372|PMID:11875061) BHF-UCL PMID:11875061 MGI:5142372 NCBI chr24:1,010,370...1,013,791
Ensembl chr24:1,010,651...1,013,072
JBrowse link
G USF1 upstream transcription factor 1 involved_in ISO (MGI:1330677|PMID:9890958)
(PMID:7852331)
BHF-UCL PMID:7852331 PMID:9890958 MGI:1330677 NCBI chr38:21,412,943...21,419,072
Ensembl chr38:21,413,050...21,418,569
JBrowse link
G USF2 upstream transcription factor 2, c-fos interacting involved_in ISO (MGI:1330677|PMID:9890958)
(PMID:7852331)
BHF-UCL PMID:7852331 PMID:9890958 MGI:1330677 NCBI chr 1:117,308,882...117,319,397
Ensembl chr 1:117,309,222...117,367,616
JBrowse link
positive regulation of translational initiation in response to starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:3589053|PMID:16121183)
(MGI:2149467|PMID:10655230)
UniProt PMID:10655230 PMID:16121183 MGI:2149467 MGI:3589053 NCBI chr30:7,144,727...7,248,014
Ensembl chr30:7,144,570...7,248,000
JBrowse link
G IMPACT impact RWD domain protein involved_in ISO (MGI:5494763|PMID:23447528) UniProt PMID:23447528 MGI:5494763 NCBI chr 7:63,947,117...63,976,628
Ensembl chr 7:63,948,157...63,976,613
JBrowse link
positive regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP27B1 cytochrome P450 family 27 subfamily B member 1 involved_in ISO (PMID:16549446) BHF-UCL PMID:16549446 NCBI chr10:1,825,224...1,830,845
Ensembl chr10:1,826,046...1,829,911
JBrowse link
G MN1 MN1 proto-oncogene, transcriptional regulator involved_in ISO (PMID:15890672) UniProt PMID:15890672 NCBI chr26:21,216,912...21,261,518
Ensembl chr26:21,216,837...21,261,031
JBrowse link
G RXRA retinoid X receptor alpha involved_in ISO (PMID:20171278) ComplexPortal PMID:20171278 NCBI chr 9:50,525,195...50,575,720
Ensembl chr 9:50,484,567...50,573,119
JBrowse link
G SNW1 SNW domain containing 1 involved_in ISO (PMID:11514567), (PMID:9632709) UniProt PMID:9632709 PMID:11514567 NCBI chr 8:50,478,924...50,512,360
Ensembl chr 8:50,479,338...50,512,243
JBrowse link
G VDR vitamin D receptor involved_in ISO (PMID:20171278) ComplexPortal PMID:20171278 NCBI chr27:6,852,915...6,909,466
Ensembl chr27:6,852,723...6,909,470
JBrowse link
regulation of cell growth by extracellular stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIF26A kinesin family member 26A involved_in ISO (MGI:4410392|PMID:19914172) UniProt PMID:19914172 MGI:4410392 NCBI chr 8:71,789,024...71,827,794
Ensembl chr 8:71,788,821...71,827,804
JBrowse link
G MYOCD myocardin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2136697|PMID:11439182) Ensembl
Ensembl
MGI
PMID:11439182 GO_REF:0000107 MGI:2136697 NCBI chr 5:36,674,476...36,774,435
Ensembl chr 5:36,674,300...36,769,327
JBrowse link
regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3655015|PMID:16324150) Ensembl
MGI
PMID:16324150 GO_REF:0000107 MGI:3655015 NCBI chr 9:22,989,257...23,019,350
Ensembl chr 9:22,989,301...23,019,349
JBrowse link
G SNW1 SNW domain containing 1 involved_in ISO (PMID:14985122) UniProt PMID:14985122 NCBI chr 8:50,478,924...50,512,360
Ensembl chr 8:50,479,338...50,512,243
JBrowse link
G TRIM24 tripartite motif containing 24 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3776949|PMID:18287084) MGI
Ensembl
PMID:18287084 GO_REF:0000107 MGI:3776949 NCBI chr16:10,033,993...10,133,450
Ensembl chr16:10,034,390...10,133,435
JBrowse link
vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PIM1 Pim-1 proto-oncogene, serine/threonine kinase involved_in ISO (PMID:22720752) CACAO PMID:22720752 NCBI chr12:6,213,504...6,217,933
Ensembl chr12:6,211,867...6,217,933
JBrowse link
G VDR vitamin D receptor involved_in ISO (PMID:16549446)
(PMID:28698609)
BHF-UCL
UniProt
PMID:16549446 PMID:28698609 NCBI chr27:6,852,915...6,909,466
Ensembl chr27:6,852,723...6,909,470
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17242
    response to stimulus 9161
      response to external stimulus 3017
        cellular response to external stimulus 448
          cellular response to external biotic stimulus 2
          cellular response to extracellular stimulus + 329
          cellular response to mechanical stimulus 131
paths to the root