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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to external stimulus
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Accession:GO:0071496 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external stimulus.
Comment:Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.



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cell-cell adhesion in response to extracellular stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITGA4 integrin subunit alpha 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:68,719,376...68,802,488
Ensembl chr2B:186,530,187...186,612,203
JBrowse link
G VCAM1 vascular cell adhesion molecule 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:103,377,815...103,395,118
Ensembl chr 1:102,091,336...102,107,732
JBrowse link
cellular response to amino acid starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF3 activating transcription factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:188,176,728...188,188,842
Ensembl chr 1:193,036,793...193,049,150
JBrowse link
G ATF4 activating transcription factor 4 involved_in ISO (MGI:3722921|PMID:14729979), (MGI:3798818|PMID:12667446)
(MGI:3582244|PMID:11106749)
UniProt PMID:11106749 PMID:12667446 PMID:14729979 MGI:3582244 MGI:3722921 MGI:3798818 NCBI chr22:20,426,743...20,428,892
Ensembl chr22:38,248,094...38,249,249
JBrowse link
G BECN1 beclin 1 ISO RGD PMID:22835012 RGD:11561942 NCBI chr17:14,493,619...14,507,809
Ensembl chr17:14,719,781...14,733,286
JBrowse link
G BMT2 base methyltransferase of 25S rRNA 2 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:104,786,390...104,905,357
Ensembl chr 7:117,488,026...117,607,033
JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:36,241,405...36,250,032
Ensembl chr 6:37,436,990...37,445,599
JBrowse link
G DAP death associated protein involved_in ISO (PMID:20537536) UniProt PMID:20537536 NCBI chr 5:10,991,599...11,078,154
Ensembl chr 5:10,846,394...10,927,869
JBrowse link
G DEPDC5 DEP domain containing 5, GATOR1 subcomplex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:12,774,147...12,929,261
Ensembl chr22:30,630,110...30,781,578
JBrowse link
G EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:37,130,386...37,184,587
Ensembl chr2A:37,895,814...37,941,686
JBrowse link
G EIF2AK3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:87,688,732...87,759,580
Ensembl chr2A:89,596,833...89,667,468
JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:18,871,867...18,973,380
Ensembl chr15:37,120,044...37,229,211
JBrowse link
G EIF2S1 eukaryotic translation initiation factor 2 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:47,935,691...47,960,055
Ensembl chr14:66,813,953...66,839,866
JBrowse link
G FAS Fas cell surface death receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:85,707,457...85,741,539
Ensembl chr10:89,217,949...89,243,612
JBrowse link
G FLCN folliculin involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:34,057,127...34,081,637
Ensembl chr17:38,988,518...39,013,160
JBrowse link
G GCN1 GCN1 activator of EIF2AK4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:117,702,791...117,769,894
Ensembl chr12:121,078,302...121,140,829
JBrowse link
G HNRNPL heterogeneous nuclear ribonucleoprotein L ISO RGD PMID:19273590 RGD:9999430 NCBI chr19:35,943,720...35,959,795 JBrowse link
G IMPACT impact RWD domain protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:17,678,297...17,720,348
Ensembl chr18:21,299,213...21,322,868
JBrowse link
G ITFG2 integrin alpha FG-GAP repeat containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:2,933,227...2,980,509
Ensembl chr12:2,865,297...2,877,555
JBrowse link
G KICS2 KICSTOR subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:24,691,658...24,721,618
Ensembl chr12:25,174,580...25,219,830
JBrowse link
G KPTN kaptin, actin binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:44,467,344...44,478,150
Ensembl chr19:53,122,663...53,131,805
JBrowse link
G LARS1 leucyl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:141,562,798...141,631,388
Ensembl chr 5:147,578,042...147,646,834
JBrowse link
G MAP1LC3A microtubule associated protein 1 light chain 3 alpha ISO RGD PMID:22835012 RGD:11561942 NCBI chr20:30,887,345...30,888,986
Ensembl chr20:32,010,284...32,020,411
JBrowse link
G MAP3K5 mitogen-activated protein kinase kinase kinase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:134,316,841...134,582,843
Ensembl chr 6:138,406,398...138,641,727
JBrowse link
G MAPK1 mitogen-activated protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:3,883,119...3,990,368
Ensembl chr22:20,365,487...20,450,335
JBrowse link
G MAPK3 mitogen-activated protein kinase 3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:30,489,362...30,498,017 JBrowse link
G MAPK8 mitogen-activated protein kinase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:45,806,748...45,936,362 JBrowse link
G MIOS meiosis regulator for oocyte development involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:8,291,307...8,346,822
Ensembl chr 7:7,643,780...7,684,246
JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:9,871,700...10,028,704
Ensembl chr 1:11,093,765...11,249,841
JBrowse link
G NPRL2 NPR2 like, GATOR1 complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:50,273,611...50,277,175
Ensembl chr 3:51,508,932...51,512,776
JBrowse link
G NPRL3 NPR3 like, GATOR1 complex subunit involved_in IEA Ensembl
UniProt
GO_REF:0000104 GO_REF:0000107 Ensembl chr16:75,187...129,220 JBrowse link
G PRKCH protein kinase C eta involved_in ISO (PMID:19797084) UniProt PMID:19797084 NCBI chr14:41,882,022...42,151,305
Ensembl chr14:60,179,081...60,408,251
JBrowse link
G PRKD1 protein kinase D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:10,353,284...10,707,841
Ensembl chr14:28,496,282...28,650,030
JBrowse link
G RNF152 ring finger protein 152 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:55,180,955...55,264,164
Ensembl chr18:58,507,684...58,508,295
JBrowse link
G RPL17 ribosomal protein L17 ISO RGD PMID:8144559 RGD:1304507 NCBI chr18:42,870,133...42,874,162
Ensembl chr18:46,219,530...46,223,503
JBrowse link
G RPS25 ribosomal protein S25 ISO RGD PMID:8144559 RGD:1304507 NCBI chr11:113,853,891...113,856,636
Ensembl chr11:117,784,075...117,787,104
JBrowse link
G RRAGA Ras related GTP binding A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:18,868,781...18,870,356
Ensembl chr 9:19,362,599...19,363,540
JBrowse link
G RRAGB Ras related GTP binding B involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:48,003,566...48,042,285
Ensembl chr  X:56,155,662...56,194,335
JBrowse link
G RRAGC Ras related GTP binding C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:38,110,578...38,132,179
Ensembl chr 1:39,456,768...39,478,244
JBrowse link
G SEH1L SEH1 like nucleoporin involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:1,342,928...1,379,719
Ensembl chr18:16,464,446...16,500,693
JBrowse link
G SESN1 sestrin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:106,789,911...106,896,382
Ensembl chr 6:110,839,631...110,946,276
JBrowse link
G SESN2 sestrin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:27,518,248...27,541,264
Ensembl chr 1:28,555,072...28,577,931
JBrowse link
G SESN3 sestrin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:90,184,571...90,249,825
Ensembl chr11:93,714,916...93,773,679
JBrowse link
G SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:119,224,304...119,267,986
Ensembl chr 1:88,077,420...88,121,056
JBrowse link
G SLC38A2 solute carrier family 38 member 2 ISO RGD PMID:11311116 RGD:68721 NCBI chr12:42,359,637...42,374,251
Ensembl chr12:43,230,007...43,244,343
JBrowse link
G SZT2 SZT2 subunit of KICSTOR complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:42,691,292...42,754,046
Ensembl chr 1:44,068,998...44,129,456
JBrowse link
G TFEB transcription factor EB involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:41,268,169...41,320,822
Ensembl chr 6:42,574,416...42,627,031
JBrowse link
G UCP2 uncoupling protein 2 ISO glutamine RGD PMID:18692019 RGD:7240714 NCBI chr11:69,047,397...69,056,056
Ensembl chr11:72,354,529...72,363,185
JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 involved_in ISO (MGI:5607224|PMID:21855797) ParkinsonsUK-UCL PMID:21855797 MGI:5607224 NCBI chr12:129,549,399...129,579,087 JBrowse link
G WDR24 WD repeat domain 24 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:699,142...704,869 JBrowse link
G WDR59 WD repeat domain 59 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:55,438,945...55,553,937
Ensembl chr16:74,792,207...74,905,582
JBrowse link
cellular response to calcium ion starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPP1R15A protein phosphatase 1 regulatory subunit 15A ISO RGD PMID:9878749 RGD:9999163 NCBI chr19:45,872,596...45,876,376
Ensembl chr19:54,880,141...54,883,003
JBrowse link
cellular response to cell-matrix adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSPP dentin sialophosphoprotein acts_upstream_of_or_within ISO (MGI:3712614|PMID:17286598) MGI PMID:17286598 MGI:3712614 NCBI chr 4:79,903,923...79,909,836 JBrowse link
G FSCN1 fascin actin-bundling protein 1 ISO RGD PMID:7657718 RGD:2317778 NCBI chr 7:5,848,902...5,862,756 JBrowse link
G GSTP1 glutathione S-transferase pi 1 ISO RGD PMID:10793289 RGD:2317832 NCBI chr11:62,942,756...62,945,701
Ensembl chr11:66,253,421...66,256,472
JBrowse link
G MMP3 matrix metallopeptidase 3 ISO RGD PMID:12963432 RGD:2325968 NCBI chr11:97,776,729...97,784,549
Ensembl chr11:101,267,566...101,275,354
JBrowse link
G MMP9 matrix metallopeptidase 9 ISO RGD PMID:12963432 PMID:20218972 RGD:2325787 RGD:2325968 NCBI chr20:42,346,305...42,354,018
Ensembl chr20:43,432,389...43,440,129
JBrowse link
G SKP2 S-phase kinase associated protein 2 ISO RGD PMID:11425869 RGD:2315071 NCBI chr 5:74,179,608...74,211,563
Ensembl chr 5:79,461,018...79,492,311
JBrowse link
cellular response to copper ion starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AOC1 amine oxidase copper containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:142,434,732...142,443,050
Ensembl chr 7:154,563,523...154,595,248
JBrowse link
cellular response to external biotic stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB1 ATP binding cassette subfamily B member 1 ISO RGD PMID:16353156 RGD:2316359 NCBI chr 7:79,497,536...79,706,277
Ensembl chr 7:93,147,950...93,243,238
JBrowse link
G CDA cytidine deaminase ISO K-selection - confluent culture RGD PMID:16353156 RGD:2316359 NCBI chr 1:19,538,696...19,568,008
Ensembl chr 1:20,583,441...20,612,711
JBrowse link
cellular response to extracellular stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADNP activity dependent neuroprotector homeobox ISO vasoactive intestinal peptide RGD PMID:15518891 RGD:2312774 NCBI chr20:47,233,696...47,276,075
Ensembl chr20:48,361,043...48,400,387
JBrowse link
G ADORA2B adenosine A2b receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:65736|PMID:8157966) MGI
Ensembl
PMID:8157966 GO_REF:0000107 MGI:65736 NCBI chr17:34,849,466...34,880,088 JBrowse link
G AIF1 allograft inflammatory factor 1 ISO lipopolysaccharide RGD PMID:18717813 RGD:2313015 NCBI chr 6:31,276,215...31,278,051
Ensembl chr 6:32,166,301...32,168,125
JBrowse link
G ALDOB aldolase, fructose-bisphosphate B ISO 3D hepatocyte culture RGD PMID:15770659 RGD:2313417 NCBI chr 9:72,630,064...72,650,918
Ensembl chr 9:100,624,151...100,638,597
JBrowse link
G ARHGAP35 Rho GTPase activating protein 35 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:43,850,692...43,994,487
Ensembl chr19:52,435,379...52,521,104
JBrowse link
G ASGR1 asialoglycoprotein receptor 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:58018|PMID:3215517) MGI
Ensembl
PMID:3215517 GO_REF:0000107 MGI:58018 NCBI chr17:7,203,387...7,209,602
Ensembl chr17:7,191,076...7,196,992
JBrowse link
G AXL AXL receptor tyrosine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1335904|PMID:10322635) MGI
Ensembl
PMID:10322635 GO_REF:0000107 MGI:1335904 NCBI chr19:38,211,555...38,254,464
Ensembl chr19:46,719,615...46,761,747
JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:36,241,405...36,250,032
Ensembl chr 6:37,436,990...37,445,599
JBrowse link
G CDKN2B cyclin dependent kinase inhibitor 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:21,838,902...21,845,355
Ensembl chr 9:22,455,662...22,462,156
JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1096764|PMID:9294610) MGI
Ensembl
PMID:9294610 GO_REF:0000107 MGI:1096764 NCBI chr14:55,832,570...55,835,984
Ensembl chr14:74,676,316...74,679,766
JBrowse link
G FOSL1 FOS like 1, AP-1 transcription factor subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1096764|PMID:9294610) MGI
Ensembl
PMID:9294610 GO_REF:0000107 MGI:1096764 NCBI chr11:61,252,513...61,261,032
Ensembl chr11:64,581,841...64,589,304
JBrowse link
G GSDMD gasdermin D acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1335904|PMID:10322635) MGI
Ensembl
PMID:10322635 GO_REF:0000107 MGI:1335904 NCBI chr 8:140,311,042...140,316,084
Ensembl chr 8:143,326,319...143,331,455
JBrowse link
G ITGA6 integrin subunit alpha 6 acts_upstream_of_or_within ISO (MGI:1335904|PMID:10322635) MGI PMID:10322635 MGI:1335904 NCBI chr2B:59,714,348...59,794,762
Ensembl chr2B:177,169,536...177,250,143
JBrowse link
G LDHA lactate dehydrogenase A acts_upstream_of_or_within ISO (MGI:1335904|PMID:10322635) MGI PMID:10322635 MGI:1335904 NCBI chr11:18,432,347...18,445,694
Ensembl chr11:18,115,250...18,128,400
JBrowse link
G LYN LYN proto-oncogene, Src family tyrosine kinase ISO RGD PMID:17845203 RGD:2303708 NCBI chr 8:52,318,497...52,455,741
Ensembl chr 8:49,755,708...49,825,287
JBrowse link
G NR4A2 nuclear receptor subfamily 4 group A member 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:84485|PMID:8961274)
(PMID:7877627)
MGI
Ensembl
PMID:7877627 PMID:8961274 GO_REF:0000107 MGI:84485 NCBI chr2B:43,584,835...43,593,118
Ensembl chr2B:160,826,091...160,837,162
JBrowse link
G P2RX7 purinergic receptor P2X 7 acts_upstream_of_or_within ISO (MGI:3772417|PMID:18082965) MGI PMID:18082965 MGI:3772417 NCBI chr12:118,731,761...118,786,039
Ensembl chr12:122,102,888...122,154,068
JBrowse link
G PLEC plectin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:140,681,252...140,742,753
Ensembl chr 8:143,674,696...143,712,433
JBrowse link
G PTPRC protein tyrosine phosphatase receptor type C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:174,246,389...174,364,893
Ensembl chr 1:178,556,104...178,672,994
JBrowse link
G SFRP2 secreted frizzled related protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1335904|PMID:10322635) MGI
Ensembl
PMID:10322635 GO_REF:0000107 MGI:1335904 NCBI chr 4:146,123,075...146,131,543
Ensembl chr 4:157,944,733...157,953,258
JBrowse link
G SLC1A2 solute carrier family 1 member 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3608234|PMID:16197522) MGI
Ensembl
PMID:16197522 GO_REF:0000107 MGI:3608234 NCBI chr11:35,223,811...35,392,799
Ensembl chr11:35,107,920...35,265,878
JBrowse link
G TLE5 TLE family member 5, transcriptional modulator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1335904|PMID:10322635) MGI
Ensembl
PMID:10322635 GO_REF:0000107 MGI:1335904 NCBI chr19:2,078,933...2,089,117
Ensembl chr19:3,030,550...3,040,375
JBrowse link
cellular response to folic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOLR1 folate receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:67,268,721...67,275,498
Ensembl chr11:70,492,039...70,498,665
JBrowse link
G FOLR2 folate receptor beta involved_in IEA GOC GO_REF:0000108 NCBI chr11:67,295,305...67,300,463
Ensembl chr11:70,518,931...70,524,088
JBrowse link
cellular response to glucose starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASNS asparagine synthetase (glutamine-hydrolyzing) involved_in ISO
IEA
RGD
Ensembl
PMID:10085239 GO_REF:0000107 RGD:2315999 NCBI chr 7:89,811,363...89,831,733
Ensembl chr 7:103,392,540...103,413,046
JBrowse link
G ATF4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:20,426,743...20,428,892
Ensembl chr22:38,248,094...38,249,249
JBrowse link
G ATG14 autophagy related 14 involved_in ISO (MGI:5619439|PMID:23332761) UniProt PMID:23332761 MGI:5619439 NCBI chr14:35,953,228...35,998,650
Ensembl chr14:54,226,720...54,272,018
JBrowse link
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:77298|PMID:7595537) MGI
Ensembl
PMID:7595537 GO_REF:0000107 MGI:77298 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100
JBrowse link
G BECN1 beclin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,493,619...14,507,809
Ensembl chr17:14,719,781...14,733,286
JBrowse link
G BHLHA15 basic helix-loop-helix family member a15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:6,306,929...6,311,026
Ensembl chr 7:103,677,022...103,677,593
JBrowse link
G CHKA choline kinase alpha involved_in ISO (PMID:34077757) UniProt PMID:34077757 NCBI chr11:63,134,776...63,202,516
Ensembl chr11:66,444,406...66,510,221
JBrowse link
G CPEB4 cytoplasmic polyadenylation element binding protein 4 involved_in ISO PMID:20937770 UniProt PMID:20937770 RGD:8553637 NCBI chr 5:169,228,648...169,300,612
Ensembl chr 5:176,133,495...176,205,388
JBrowse link
G EIF2AK3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:87,688,732...87,759,580
Ensembl chr2A:89,596,833...89,667,468
JBrowse link
G FOXO3 forkhead box O3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:106,360,519...106,485,676
Ensembl chr 6:110,406,266...110,516,272
JBrowse link
G GCK glucokinase ISO down-regulation of the counterregulatory response to insulin-induced hypoglycemia RGD PMID:18292346 RGD:2301900 NCBI chr 7:44,857,604...44,903,683
Ensembl chr 7:44,926,848...44,937,751
JBrowse link
G HIGD1A HIG1 hypoxia inducible domain family member 1A acts_upstream_of_or_within ISO (MGI:5643884|PMID:25683712)
(MGI:3654896|PMID:16815968)
MGI PMID:16815968 PMID:25683712 MGI:3654896 MGI:5643884 NCBI chr 3:42,692,771...42,710,654
Ensembl chr 3:43,754,154...43,773,460
JBrowse link
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 involved_in ISO (PMID:25689357) CAFA PMID:25689357 NCBI chr12:34,456,900...34,463,317
Ensembl chr12:35,184,943...35,188,443
JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:96,351,645...96,356,761
Ensembl chr 9:124,865,211...124,870,458
JBrowse link
G IFI16 interferon gamma inducible protein 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:134,364,706...134,405,910
Ensembl chr 1:138,152,328...138,203,424
JBrowse link
G IMPACT impact RWD domain protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:17,678,297...17,720,348
Ensembl chr18:21,299,213...21,322,868
JBrowse link
G ITFG2 integrin alpha FG-GAP repeat containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:2,933,227...2,980,509
Ensembl chr12:2,865,297...2,877,555
JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,071,118...61,078,667
Ensembl chr11:64,404,572...64,412,667
JBrowse link
G KICS2 KICSTOR subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:24,691,658...24,721,618
Ensembl chr12:25,174,580...25,219,830
JBrowse link
G KPTN kaptin, actin binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:44,467,344...44,478,150
Ensembl chr19:53,122,663...53,131,805
JBrowse link
G LOC100972387 DNA-directed RNA polymerases I, II, and III subunit RPABC2 involved_in ISO PMID:23843614 UniProt PMID:23843614 RGD:8553949 NCBI chr22:18,868,872...18,988,918
Ensembl chr22:36,796,015...36,814,469
JBrowse link
G MTMR3 myotubularin related protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:10,925,275...11,072,554
Ensembl chr22:28,818,273...28,872,982
JBrowse link
G MYBBP1A MYB binding protein 1a involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:4,593,741...4,610,203
Ensembl chr17:4,586,431...4,603,097
JBrowse link
G NFE2L2 NFE2 like bZIP transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:64,509,446...64,544,600
Ensembl chr2B:182,214,116...182,248,085
JBrowse link
G NUAK2 NUAK family kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:180,910,956...180,931,147
Ensembl chr 1:185,197,678...185,217,264
JBrowse link
G PIK3C3 phosphatidylinositol 3-kinase catalytic subunit type 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:35,203,896...35,336,512
Ensembl chr18:38,754,789...38,882,037
JBrowse link
G PIK3R4 phosphoinositide-3-kinase regulatory subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:127,743,873...127,834,512
Ensembl chr 3:135,089,584...135,157,193
JBrowse link
G PLIN2 perilipin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:18,928,455...18,951,132
Ensembl chr 9:19,421,928...19,462,222
JBrowse link
G PLIN3 perilipin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:3,857,506...3,886,274
Ensembl chr19:4,808,512...4,835,180
JBrowse link
G PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in ISO (PMID:21145489) UniProt PMID:21145489 NCBI chr18:53,286,590...53,290,913
Ensembl chr18:56,611,098...56,615,449
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:69,581,748...69,620,721
Ensembl chr 5:74,627,830...74,666,505
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:55,928,577...55,998,628
Ensembl chr 1:57,664,237...57,702,227
JBrowse link
G PRKCD protein kinase C delta ISO RGD PMID:17728702 RGD:1642520 NCBI chr 3:53,104,137...53,135,588
Ensembl chr 3:54,330,328...54,357,910
JBrowse link
G RRP8 ribosomal RNA processing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:6,630,695...6,735,711
Ensembl chr11:6,415,003...6,418,414
JBrowse link
G SESN1 sestrin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:106,789,911...106,896,382
Ensembl chr 6:110,839,631...110,946,276
JBrowse link
G SESN2 sestrin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:27,518,248...27,541,264
Ensembl chr 1:28,555,072...28,577,931
JBrowse link
G SESN3 sestrin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:90,184,571...90,249,825
Ensembl chr11:93,714,916...93,773,679
JBrowse link
G SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:119,224,304...119,267,986
Ensembl chr 1:88,077,420...88,121,056
JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069
JBrowse link
G SLC2A1 solute carrier family 2 member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1932248|PMID:11259273) MGI
Ensembl
PMID:11259273 GO_REF:0000107 MGI:1932248 NCBI chr 1:42,224,273...42,257,184
Ensembl chr 1:43,600,733...43,634,143
JBrowse link
G SLC3A2 solute carrier family 3 member 2 ISO RGD PMID:22185814 RGD:151361127 NCBI chr11:58,212,395...58,241,686
Ensembl chr11:61,565,680...61,594,579
JBrowse link
G SLC7A5 solute carrier family 7 member 5 ISO RGD PMID:22185814 RGD:151361127 NCBI chr16:68,512,407...68,552,763 JBrowse link
G SUV39H1 SUV39H1 histone lysine methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:40,993,911...41,007,362
Ensembl chr  X:48,855,494...48,868,131
JBrowse link
G SZT2 SZT2 subunit of KICSTOR complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:42,691,292...42,754,046
Ensembl chr 1:44,068,998...44,129,456
JBrowse link
G TBL2 transducin beta like 2 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 7:80,721,616...80,730,685 JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14744935) MGI
Ensembl
PMID:14744935 GO_REF:0000107 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120
JBrowse link
G UPP1 uridine phosphorylase 1 ISO RGD PMID:18457515 RGD:2317094 NCBI chr 7:48,729,975...48,749,598
Ensembl chr 7:48,838,893...48,858,185
JBrowse link
G VLDLR very low density lipoprotein receptor ISO RGD PMID:18262491 RGD:2324645 NCBI chr 9:2,428,639...2,463,796
Ensembl chr 9:2,621,199...2,653,980
JBrowse link
G XBP1 X-box binding protein 1 involved_in ISO (MGI:5607242|PMID:17612490) UniProt PMID:17612490 MGI:5607242 NCBI chr22:9,863,479...9,869,491
Ensembl chr22:27,567,041...27,571,943
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:36,743,341...36,753,261
Ensembl chr 1:38,093,917...38,103,556
JBrowse link
cellular response to iron ion starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HFE homeostatic iron regulator ISO RGD PMID:16208485 RGD:1582698 NCBI chr 6:25,921,663...25,930,852
Ensembl chr 6:26,580,358...26,588,591
JBrowse link
cellular response to L-ascorbic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELN elastin ISO RGD PMID:2859894 RGD:9585689
G LEP leptin ISO RGD PMID:20400526 RGD:5128594 NCBI chr 7:120,230,896...120,248,602
Ensembl chr 7:132,885,011...132,901,519
JBrowse link
cellular response to leucine starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATF2 activating transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:62,348,245...62,444,428
Ensembl chr2B:179,799,365...179,895,007
JBrowse link
G ATF4 activating transcription factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:20,426,743...20,428,892
Ensembl chr22:38,248,094...38,249,249
JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:5494763|PMID:23447528) UniProt PMID:23447528 MGI:5494763 NCBI chr15:18,871,867...18,973,380
Ensembl chr15:37,120,044...37,229,211
JBrowse link
G GCN1 GCN1 activator of EIF2AK4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:117,702,791...117,769,894
Ensembl chr12:121,078,302...121,140,829
JBrowse link
G IMPACT impact RWD domain protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:17,678,297...17,720,348
Ensembl chr18:21,299,213...21,322,868
JBrowse link
G LARS1 leucyl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:141,562,798...141,631,388
Ensembl chr 5:147,578,042...147,646,834
JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:9,871,700...10,028,704
Ensembl chr 1:11,093,765...11,249,841
JBrowse link
G RNF167 ring finger protein 167 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:4,988,275...4,993,423
Ensembl chr17:4,975,849...4,981,335
JBrowse link
G RRAGB Ras related GTP binding B involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:48,003,566...48,042,285
Ensembl chr  X:56,155,662...56,194,335
JBrowse link
G RRAGD Ras related GTP binding D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:87,237,442...87,285,579
Ensembl chr 6:90,511,250...90,558,822
JBrowse link
G SESN2 sestrin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:27,518,248...27,541,264
Ensembl chr 1:28,555,072...28,577,931
JBrowse link
cellular response to magnesium starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRIN2B glutamate ionotropic receptor NMDA type subunit 2B ISO RGD PMID:17428633 RGD:4106247 NCBI chr12:13,543,104...13,987,437
Ensembl chr12:13,969,387...14,388,799
JBrowse link
cellular response to mechanical stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFAP1 actin filament associated protein 1 ISO mechanical cyclic stretching RGD PMID:12114187 RGD:625602 Ensembl chr 4:7,826,585...7,939,478 JBrowse link
G AGT angiotensinogen ISO RGD PMID:21131638 RGD:5129192 NCBI chr 1:206,252,141...206,263,830
Ensembl chr 1:211,279,015...211,291,044
JBrowse link
G AKT1 AKT serine/threonine kinase 1 ISO RGD PMID:20042609 RGD:7242068 NCBI chr14:85,417,229...85,444,722
Ensembl chr14:105,208,128...105,236,756
JBrowse link
G ANKRD1 ankyrin repeat domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:87,652,254...87,661,173
Ensembl chr10:91,180,034...91,188,165
JBrowse link
G AQP1 aquaporin 1 (Colton blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:31,524,933...31,538,602
Ensembl chr 7:31,644,331...31,658,141
JBrowse link
G ARHGDIA Rho GDP dissociation inhibitor alpha ISO RGD PMID:18566890 RGD:9684962 NCBI chr17:76,273,196...76,276,942
Ensembl chr17:81,975,340...81,978,447
JBrowse link
G ATP1A1 ATPase Na+/K+ transporting subunit alpha 1 ISO RGD PMID:17458903 RGD:6903221 NCBI chr 1:86,162,401...86,193,883
Ensembl chr 1:121,212,488...121,243,099
JBrowse link
G ATP1A2 ATPase Na+/K+ transporting subunit alpha 2 ISO RGD PMID:16893515 PMID:17458903 RGD:1581763 RGD:6903221 NCBI chr 1:135,469,495...135,497,303
Ensembl chr 1:139,390,549...139,418,303
JBrowse link
G BAD BCL2 associated agonist of cell death involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:59,626,981...59,641,824
Ensembl chr11:62,971,808...62,986,257
JBrowse link
G BAG3 BAG cochaperone 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3656163|PMID:16936253) MGI
Ensembl
PMID:16936253 GO_REF:0000107 MGI:3656163 NCBI chr10:116,221,747...116,248,692
Ensembl chr10:119,643,963...119,665,964
JBrowse link
G BAK1 BCL2 antagonist/killer 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:33,146,998...33,154,755
Ensembl chr 6:34,255,769...34,263,211
JBrowse link
G BCL10 BCL10 immune signaling adaptor involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr 1:117,823,388...117,834,314 JBrowse link
G BMP2 bone morphogenetic protein 2 ISO RGD PMID:20877159 RGD:9068439 NCBI chr20:6,765,161...6,777,728
Ensembl chr20:6,546,173...6,558,610
JBrowse link
G BMP4 bone morphogenetic protein 4 ISO RGD PMID:20877159 RGD:9068439 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link
G BMP6 bone morphogenetic protein 6 ISO RGD PMID:23198877 RGD:7242187 NCBI chr 6:7,564,164...7,720,341
Ensembl chr 6:7,848,249...8,000,649
JBrowse link
G BNIP3 BCL2 interacting protein 3 involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr10:128,671,663...128,685,952
Ensembl chr10:132,858,211...132,871,634
JBrowse link
G CASP1 caspase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:99,965,964...99,975,640
Ensembl chr11:103,448,497...103,458,149
Ensembl chr11:103,448,497...103,458,149
JBrowse link
G CASP2 caspase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:135,283,072...135,307,855
Ensembl chr 7:147,773,749...147,792,958
JBrowse link
G CASP5 caspase 5 involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr11:99,931,066...99,963,652 JBrowse link
G CASP8 caspase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:88,490,611...88,542,132
Ensembl chr2B:206,669,544...206,696,468
JBrowse link
G CASP8AP2 caspase 8 associated protein 2 involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr 6:87,707,152...87,754,836
Ensembl chr 6:90,996,127...91,023,757
JBrowse link
G CAV1 caveolin 1 ISO RGD PMID:20172952 RGD:6849300 NCBI chr 7:108,497,125...108,533,090
Ensembl chr 7:121,193,424...121,229,655
JBrowse link
G CD40 CD40 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:42,455,711...42,467,139
Ensembl chr20:43,541,619...43,552,994
JBrowse link
G CHEK1 checkpoint kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:120,446,352...120,478,207
Ensembl chr11:124,359,218...124,390,981
JBrowse link
G COL1A1 collagen type I alpha 1 chain involved_in ISO
IEA
uniaxial mechanical tension RGD
Ensembl
PMID:22615126 GO_REF:0000107 RGD:8552682 NCBI chr17:44,274,349...44,291,764
Ensembl chr17:49,150,677...49,166,677
JBrowse link
G COL2A1 collagen type II alpha 1 chain ISO cyclic compressive stress RGD PMID:19725071 RGD:8661239 NCBI chr12:40,726,137...40,757,690 JBrowse link
G CRADD CASP2 and RIPK1 domain containing adaptor with death domain involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr12:91,220,813...91,593,799 JBrowse link
G CTNNB1 catenin beta 1 ISO RGD PMID:20042609 RGD:7242068 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030
JBrowse link
G CTSB cathepsin B ISO cyclic tensile stress RGD PMID:18464888 RGD:2315512 NCBI chr 8:7,333,498...7,359,264 JBrowse link
G CYP11B1 cytochrome P450 family 11 subfamily B member 1 ISO cyclic stretching RGD PMID:19478813 RGD:4891163 NCBI chr 8:139,584,976...139,592,466
Ensembl chr 8:142,629,127...142,634,654
JBrowse link
G DAG1 dystroglycan 1 ISO RGD PMID:18556591 RGD:11541067 NCBI chr 3:49,396,180...49,464,689
Ensembl chr 3:50,640,615...50,703,852
JBrowse link
G EDNRA endothelin receptor type A ISO RGD PMID:18320471 RGD:4889461 NCBI chr 4:139,815,336...139,879,600
Ensembl chr 4:151,476,356...151,536,497
JBrowse link
G EGFR epidermal growth factor receptor ISO mechanical stretch RGD PMID:20927110 RGD:5131524 NCBI chr 7:55,614,042...55,807,285
Ensembl chr 7:56,046,296...56,111,615
JBrowse link
G EGR1 early growth response 1 ISO cyclic stretch RGD PMID:16998809 RGD:5131896 NCBI chr 5:133,845,305...133,849,291
Ensembl chr 5:139,975,635...139,979,260
JBrowse link
G ENG endoglin ISO mechanical stretch RGD PMID:22941949 RGD:7248789 NCBI chr 9:98,934,080...98,973,862
Ensembl chr 9:127,605,608...127,644,641
JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ISO RGD PMID:24157151 RGD:13204713 NCBI chr 6:129,591,858...129,673,000
Ensembl chr 6:133,698,640...133,783,644
JBrowse link
G F11R F11 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:136,399,766...136,424,722
Ensembl chr 1:140,324,943...140,346,890
JBrowse link
G F2 coagulation factor II, thrombin ISO RGD PMID:22915765 RGD:6893464 NCBI chr11:46,669,925...46,690,391
Ensembl chr11:47,227,891...47,249,157
JBrowse link
G FADD Fas associated via death domain involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr11:65,300,889...65,305,020 JBrowse link
G FAS Fas cell surface death receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:85,707,457...85,741,539
Ensembl chr10:89,217,949...89,243,612
JBrowse link
G FGF2 fibroblast growth factor 2 ISO RGD PMID:19012730 RGD:8662390 NCBI chr 4:115,005,136...115,076,369
Ensembl chr 4:126,149,813...126,214,942
JBrowse link
G GADD45A growth arrest and DNA damage inducible alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:66,925,063...66,928,222
Ensembl chr 1:68,880,912...68,884,188
JBrowse link
G GCLC glutamate-cysteine ligase catalytic subunit ISO RGD PMID:20054150 RGD:8547898 NCBI chr 6:53,052,145...53,102,794
Ensembl chr 6:54,687,315...54,734,994
JBrowse link
G GJA1 gap junction protein alpha 1 ISO RGD PMID:10631100 RGD:7207855 NCBI chr 6:119,213,513...119,227,617 JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 ISO mechanical stretching RGD PMID:26880260 RGD:13504840 NCBI chr10:96,012,345...96,046,266
Ensembl chr10:99,506,205...99,540,178
JBrowse link
G GSK3B glycogen synthase kinase 3 beta ISO RGD PMID:20042609 RGD:7242068 NCBI chr 3:116,943,205...117,215,001
Ensembl chr 3:123,861,379...124,126,771
JBrowse link
G HABP4 hyaluronan binding protein 4 involved_in ISO PMID:15862299 UniProt PMID:15862299 RGD:8553316 NCBI chr 9:67,545,866...67,587,270
Ensembl chr 9:95,668,184...95,707,653
JBrowse link
G HDAC3 histone deacetylase 3 ISO RGD PMID:19261284 RGD:9590196 NCBI chr 5:136,981,790...136,997,786
Ensembl chr 5:143,094,406...143,110,322
JBrowse link
G HDAC4 histone deacetylase 4 ISO RGD PMID:19261284 RGD:9590196 NCBI chr2B:126,287,745...126,649,815
Ensembl chr2B:245,123,061...245,427,054
JBrowse link
G HDAC7 histone deacetylase 7 ISO RGD PMID:19261284 RGD:9590196 NCBI chr12:40,913,301...40,950,542
Ensembl chr12:41,789,367...41,825,123
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha ISO RGD PMID:15183444 RGD:9068913 NCBI chr14:42,295,691...42,348,478
Ensembl chr14:60,552,374...60,604,885
JBrowse link
G IGF1R insulin like growth factor 1 receptor ISO RGD PMID:21854769 RGD:10046007 NCBI chr15:77,332,926...77,648,474
Ensembl chr15:96,535,164...96,832,974
JBrowse link
G IGF2 insulin like growth factor 2 ISO RGD PMID:20695079 RGD:5509947 NCBI chr11:2,170,190...2,199,442
Ensembl chr11:2,202,743...2,228,890
JBrowse link
G IL13 interleukin 13 ISO RGD PMID:18362439 RGD:2298568 NCBI chr 5:128,073,863...128,078,453
Ensembl chr 5:134,235,788...134,240,548
JBrowse link
G IL13RA2 interleukin 13 receptor subunit alpha 2 ISO RGD PMID:18362439 RGD:2298568 NCBI chr  X:104,092,993...104,146,062
Ensembl chr  X:114,597,077...114,635,253
JBrowse link
G IL18 interleukin 18 ISO RGD PMID:18320471 RGD:4889461 NCBI chr11:107,024,376...107,045,194
Ensembl chr11:110,867,586...110,888,371
JBrowse link
G IL1B interleukin 1 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424
JBrowse link
G IL33 interleukin 33 ISO RGD PMID:17492053 RGD:40813740 NCBI chr 9:6,027,014...6,069,540
Ensembl chr 9:6,234,178...6,248,624
JBrowse link
G IRF1 interferon regulatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:127,903,887...127,913,843
Ensembl chr 5:134,067,441...134,075,035
JBrowse link
G ITGA2 integrin subunit alpha 2 ISO RGD PMID:12856576 RGD:1582308 NCBI chr 5:60,935,452...61,040,726
Ensembl chr 5:62,555,370...62,659,720
JBrowse link
G ITGB1 integrin subunit beta 1 ISO cyclic uniaxial tensile strain RGD PMID:19720043 RGD:2325327 NCBI chr10:33,023,573...33,081,384
Ensembl chr10:33,608,978...33,644,031
JBrowse link
G ITGB3 integrin subunit beta 3 ISO RGD PMID:12856576 RGD:1582308 NCBI chr17:10,134,450...10,194,596
Ensembl chr17:10,353,111...10,392,382
JBrowse link
G KCND2 potassium voltage-gated channel subfamily D member 2 ISO RGD PMID:17293496 RGD:7247436 NCBI chr 7:112,277,018...112,751,896
Ensembl chr 7:124,966,816...125,437,430
JBrowse link
G KCNJ2 potassium inwardly rectifying channel subfamily J member 2 ISO RGD PMID:17293496 RGD:7247436 NCBI chr17:64,097,908...64,112,914
Ensembl chr17:69,487,846...69,489,129
JBrowse link
G KCNJ4 potassium inwardly rectifying channel subfamily J member 4 ISO RGD PMID:17293496 RGD:7247436 NCBI chr22:19,341,699...19,370,666
Ensembl chr22:37,163,760...37,165,097
JBrowse link
G KCNK4 potassium two pore domain channel subfamily K member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:59,648,374...59,657,083
Ensembl chr11:62,994,544...63,001,229
JBrowse link
G LOC100986914 cytochrome b-245 light chain ISO RGD PMID:16685209 RGD:2317865 NCBI chr16:69,356,396...69,364,225
Ensembl chr16:89,016,349...89,024,719
JBrowse link
G LTBP1 latent transforming growth factor beta binding protein 1 ISO RGD PMID:9607192 RGD:10412058 NCBI chr2A:32,956,937...33,409,286
Ensembl chr2A:33,667,191...34,120,602
JBrowse link
G LTBR lymphotoxin beta receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,514,432...6,521,966
Ensembl chr12:6,422,470...6,438,510
JBrowse link
G MAG myelin associated glycoprotein ISO RGD PMID:16140204 RGD:9685293 NCBI chr19:32,238,457...32,260,497
Ensembl chr19:40,975,763...40,997,401
JBrowse link
G MAP2K4 mitogen-activated protein kinase kinase 4 involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr17:39,497,105...39,622,331
Ensembl chr17:44,248,857...44,359,909
JBrowse link
G MAP3K1 mitogen-activated protein kinase kinase kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:57,116,405...57,197,017
Ensembl chr 5:58,745,579...58,826,959
JBrowse link
G MAP3K14 mitogen-activated protein kinase kinase kinase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:12,011,037...12,064,978
Ensembl chr17:12,183,243...12,237,131
JBrowse link
G MAP3K2 mitogen-activated protein kinase kinase kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:32,889,499...32,979,077
Ensembl chr2B:127,972,900...128,008,766
JBrowse link
G MAPK3 mitogen-activated protein kinase 3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr16:30,489,362...30,498,017 JBrowse link
G MAPK8 mitogen-activated protein kinase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:45,806,748...45,936,362 JBrowse link
G MKX mohawk homeobox ISO RGD PMID:27370800 RGD:40924660 NCBI chr10:27,820,454...27,893,373
Ensembl chr10:28,181,483...28,254,311
JBrowse link
G MMP7 matrix metallopeptidase 7 ISO RGD PMID:20054150 RGD:8547898 NCBI chr11:97,467,037...97,477,305
Ensembl chr11:100,960,032...100,971,099
JBrowse link
G MTPN myotrophin ISO RGD PMID:12031792 RGD:1581046 NCBI chr 7:127,896,148...127,947,122
Ensembl chr 7:140,392,620...140,443,591
JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:38,036,565...38,041,014
Ensembl chr 3:38,319,024...38,323,572
JBrowse link
G MYH9 myosin heavy chain 9 ISO RGD PMID:8888698 RGD:11533927 NCBI chr22:17,200,623...17,305,826
Ensembl chr22:35,039,101...35,121,618
JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:94,925,048...95,040,849
Ensembl chr 4:105,589,062...105,704,098
JBrowse link
G NOS1 nitric oxide synthase 1 ISO RGD PMID:23619128 RGD:7257608 NCBI chr12:114,784,232...114,938,385
Ensembl chr12:118,163,655...118,314,005
JBrowse link
G NOS3 nitric oxide synthase 3 ISO RGD PMID:19673940 RGD:8693631 NCBI chr 7:142,577,334...142,600,702
Ensembl chr 7:154,730,009...154,755,233
JBrowse link
G NPPA natriuretic peptide A ISO RGD PMID:23617620 RGD:7297055 NCBI chr 1:10,608,025...10,610,287
Ensembl chr 1:11,825,072...11,827,373
JBrowse link
G NPPB natriuretic peptide B ISO RGD PMID:21812548 PMID:23617620 RGD:5685655 RGD:7297055 NCBI chr 1:10,621,416...10,622,960
Ensembl chr 1:11,838,518...11,839,995
JBrowse link
G PAX2 paired box 2 involved_in ISO (MGI:3707943|PMID:17164400) UniProt PMID:17164400 MGI:3707943 NCBI chr10:97,344,978...97,429,086
Ensembl chr10:100,822,676...100,904,028
JBrowse link
G PDE2A phosphodiesterase 2A involved_in ISO (MGI:5294515|PMID:21571906) UniProt PMID:21571906 MGI:5294515 NCBI chr11:67,653,335...67,753,450
Ensembl chr11:70,875,552...70,975,322
JBrowse link
G PDGFB platelet derived growth factor subunit B ISO RGD PMID:7653578 RGD:10449502 NCBI chr22:20,127,223...20,148,407
Ensembl chr22:37,944,018...37,964,883
JBrowse link
G PLEC plectin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:140,681,252...140,742,753
Ensembl chr 8:143,674,696...143,712,433
JBrowse link
G PTGER4 prostaglandin E receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:69,686,906...69,700,739
Ensembl chr 5:74,731,470...74,745,148
JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:21051526 RGD:5135055 NCBI chr 1:162,205,534...162,214,130
Ensembl chr 1:166,355,845...166,364,519
JBrowse link
G PTPN11 protein tyrosine phosphatase non-receptor type 11 ISO RGD PMID:18757826 RGD:12743581 NCBI chr12:110,016,364...110,107,462
Ensembl chr12:113,435,669...113,503,762
JBrowse link
G RAC1 Rac family small GTPase 1 ISO RGD PMID:12105187 RGD:1299247 NCBI chr 7:7,039,379...7,068,866 JBrowse link
G RIPOR2 RHO family interacting cell polarization regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:24,642,239...24,768,074
Ensembl chr 6:24,973,412...25,204,745
JBrowse link
G SCX scleraxis bHLH transcription factor involved_in ISO (MGI:5294512|PMID:21625049) UniProt PMID:21625049 MGI:5294512 NCBI chr 8:141,027,765...141,031,194 JBrowse link
G SERPINE1 serpin family E member 1 ISO biaxial cyclic stretch RGD PMID:20054150 RGD:8547898 NCBI chr 7:93,267,517...93,279,728
Ensembl chr 7:106,510,130...106,518,450
JBrowse link
G SFTPA1 surfactant protein A1 ISO RGD PMID:12600831 RGD:4143475 NCBI chr10:76,571,312...76,575,820 JBrowse link
G SFTPB surfactant protein B ISO RGD PMID:12600831 RGD:4143475 NCBI chr2A:85,708,485...85,718,120
Ensembl chr2A:87,257,244...87,268,332
JBrowse link
G SFTPC surfactant protein C ISO RGD PMID:12600831 RGD:4143475 NCBI chr 8:21,402,060...21,409,438
Ensembl chr 8:18,345,940...18,348,764
JBrowse link
G SLC2A1 solute carrier family 2 member 1 ISO RGD PMID:19918242 RGD:12879501 NCBI chr 1:42,224,273...42,257,184
Ensembl chr 1:43,600,733...43,634,143
JBrowse link
G SLC38A2 solute carrier family 38 member 2 ISO RGD PMID:15288886 RGD:9999216 NCBI chr12:42,359,637...42,374,251
Ensembl chr12:43,230,007...43,244,343
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in ISO (MGI:5285125|PMID:21512138) UniProt PMID:21512138 MGI:5285125 NCBI chr17:66,028,737...66,034,122 JBrowse link
G TGFB1 transforming growth factor beta 1 ISO RGD PMID:19012730 PMID:24120154 RGD:11073676 RGD:8662390 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973
JBrowse link
G TLR3 toll like receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:178,238,352...178,256,264
Ensembl chr 4:190,446,487...190,462,728
JBrowse link
G TLR4 toll like receptor 4 involved_in ISO
IEA
RGD
Ensembl
PMID:20202224 GO_REF:0000107 RGD:4144075 NCBI chr 9:88,827,495...88,840,458
Ensembl chr 9:117,180,550...117,190,711
JBrowse link
G TLR5 toll like receptor 5 involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr 1:198,787,046...198,819,537
Ensembl chr 1:203,798,767...203,801,343
JBrowse link
G TLR7 toll like receptor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:5,479,247...5,504,810
Ensembl chr  X:12,767,981...12,790,517
JBrowse link
G TLR8 toll like receptor 8 involved_in ISO (PMID:19593445) UniProt PMID:19593445 NCBI chr  X:5,518,742...5,535,304 JBrowse link
G TLR8 toll like receptor 8 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:12,820,508...12,823,716 JBrowse link
G TMEM150C transmembrane protein 150C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:41,643,173...41,730,814
Ensembl chr 4:47,552,096...47,571,212
JBrowse link
G TNFRSF10A TNF receptor superfamily member 10a involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:22,440,502...22,476,790
Ensembl chr 8:19,378,547...19,414,724
JBrowse link
G TNFRSF10B TNF receptor superfamily member 10b involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:22,270,325...22,318,841
Ensembl chr 8:19,209,904...19,258,498
JBrowse link
G TNFRSF1A TNF receptor superfamily member 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,457,617...6,470,969
Ensembl chr12:6,374,257...6,387,613
JBrowse link
G TNFRSF8 TNF receptor superfamily member 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:10,813,111...10,893,005
Ensembl chr 1:12,029,038...12,108,495
JBrowse link
G TNFSF14 TNF superfamily member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:5,691,648...5,700,935
Ensembl chr19:6,614,378...6,621,763
JBrowse link
G VEGFA vascular endothelial growth factor A ISO RGD PMID:19012730 RGD:8662390 NCBI chr 6:43,361,053...43,377,366
Ensembl chr 6:44,650,365...44,666,353
JBrowse link
G WNT11 Wnt family member 11 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5705446|PMID:25959411) MGI
Ensembl
PMID:25959411 GO_REF:0000107 MGI:5705446 NCBI chr11:71,239,781...71,263,915
Ensembl chr11:74,540,169...74,560,024
JBrowse link
cellular response to menadione term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCPS decapping enzyme, scavenger involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:121,119,720...121,159,513
Ensembl chr11:125,028,616...125,068,807
JBrowse link
G NDOR1 NADPH dependent diflavin oxidoreductase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:108,265,305...108,278,923
Ensembl chr 9:137,233,940...137,247,716
JBrowse link
cellular response to methionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:1201245 RGD:6893692 NCBI chr 1:212,353,195...212,463,304
Ensembl chr 1:217,358,050...217,460,946
JBrowse link
cellular response to nutrient term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT2 acetyl-CoA acetyltransferase 2 ISO N-acetylcysteine RGD PMID:12563020 RGD:1598705 NCBI chr 6:157,644,894...157,661,965
Ensembl chr 6:162,656,497...162,673,606
JBrowse link
G CCNE1 cyclin E1 ISO RGD PMID:17979132 RGD:2289272 NCBI chr19:26,739,285...26,751,630
Ensembl chr19:35,496,700...35,510,295
JBrowse link
G CDKN2B cyclin dependent kinase inhibitor 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:21,838,902...21,845,355
Ensembl chr 9:22,455,662...22,462,156
JBrowse link
G CYP11B1 cytochrome P450 family 11 subfamily B member 1 ISO potassium RGD PMID:16876110 RGD:4891413 NCBI chr 8:139,584,976...139,592,466
Ensembl chr 8:142,629,127...142,634,654
JBrowse link
G DBI diazepam binding inhibitor, acyl-CoA binding protein ISO RGD PMID:15825833 RGD:2316268 NCBI chr2B:6,309,048...6,314,660
Ensembl chr2B:119,887,728...119,892,986
JBrowse link
G HMOX1 heme oxygenase 1 ISO RGD PMID:15531134 RGD:1582714 NCBI chr22:16,388,368...16,401,289
Ensembl chr22:34,230,825...34,244,063
JBrowse link
G LPL lipoprotein lipase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:19,164,541...19,193,100
Ensembl chr 8:16,113,415...16,142,966
JBrowse link
G PDK2 pyruvate dehydrogenase kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:44,185,463...44,202,221
Ensembl chr17:49,060,030...49,076,115
JBrowse link
G PRDM4 PR/SET domain 4 ISO fetal calf serum RGD PMID:10485890 RGD:633619 NCBI chr12:105,303,009...105,331,305
Ensembl chr12:108,699,444...108,727,304
JBrowse link
G TNKS tankyrase ISO RGD PMID:25876076 RGD:13628743 NCBI chr 8:9,435,412...9,654,810 JBrowse link
G XBP1 X-box binding protein 1 involved_in ISO (MGI:4442277|PMID:20348926) UniProt PMID:20348926 MGI:4442277 NCBI chr22:9,863,479...9,869,491
Ensembl chr22:27,567,041...27,571,943
JBrowse link
cellular response to nutrient levels term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD68 CD68 molecule involved_in ISO (MGI:6274946|PMID:16157452) ARUK-UCL PMID:16157452 MGI:6274946 NCBI chr17:7,610,725...7,613,696
Ensembl chr17:7,596,947...7,599,981
JBrowse link
G EIF4G1 eukaryotic translation initiation factor 4 gamma 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:181,351,938...181,372,776
Ensembl chr 3:189,833,490...189,855,060
JBrowse link
G FAM107A family with sequence similarity 107 member A involved_in ISO (MGI:6162291|PMID:21969592) UniProt PMID:21969592 MGI:6162291 NCBI chr 3:58,494,342...58,557,712
Ensembl chr 3:59,903,602...59,967,013
JBrowse link
G ICAM1 intercellular adhesion molecule 1 ISO RGD PMID:20643106 RGD:4145376 NCBI chr19:9,821,402...9,837,021
Ensembl chr19:10,484,414...10,500,605
JBrowse link
G IL6 interleukin 6 ISO RGD PMID:23079940 RGD:11062063 NCBI chr 7:23,415,922...23,420,767 JBrowse link
G KCNB1 potassium voltage-gated channel subfamily B member 1 involved_in ISO PMID:19077057 UniProt PMID:19077057 RGD:10047372 NCBI chr20:45,636,371...45,821,536
Ensembl chr20:46,776,274...46,885,521
JBrowse link
G LCN2 lipocalin 2 ISO serum deprivation RGD PMID:17356516 RGD:2303047 NCBI chr 9:99,259,278...99,274,494
Ensembl chr 9:127,940,799...127,944,798
JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:9,871,700...10,028,704
Ensembl chr 1:11,093,765...11,249,841
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:69,581,748...69,620,721
Ensembl chr 5:74,627,830...74,666,505
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:55,928,577...55,998,628
Ensembl chr 1:57,664,237...57,702,227
JBrowse link
G PRKAB1 protein kinase AMP-activated non-catalytic subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:117,246,691...117,260,465
Ensembl chr12:120,624,004...120,637,585
JBrowse link
G PRKAB2 protein kinase AMP-activated non-catalytic subunit beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:122,577,308...122,595,083
Ensembl chr 1:112,934,877...112,952,364
JBrowse link
G PRKAG1 protein kinase AMP-activated non-catalytic subunit gamma 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:39,731,899...39,748,620
Ensembl chr12:40,611,532...40,628,263
JBrowse link
G PRKAG3 protein kinase AMP-activated non-catalytic subunit gamma 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:106,085,299...106,139,298
Ensembl chr2B:224,679,831...224,687,705
JBrowse link
G RPTOR regulatory associated protein of MTOR complex 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:74,973,420...75,389,339
Ensembl chr17:80,705,544...81,118,708
JBrowse link
G TXN2 thioredoxin 2 ISO Choline-deprived diet. RGD PMID:18578693 RGD:2306156 NCBI chr22:17,384,017...17,398,965
Ensembl chr22:35,220,721...35,235,877
JBrowse link
G UCN3 urocortin 3 ISO High-fat diet RGD PMID:17360501 RGD:2306172 NCBI chr10:5,410,501...5,419,650
Ensembl chr10:5,405,683...5,406,168
JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 involved_in ISO (MGI:5285135|PMID:21258367) UniProt PMID:21258367 MGI:5285135 NCBI chr12:129,549,399...129,579,087 JBrowse link
cellular response to oxygen-glucose deprivation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIFM1 apoptosis inducing factor mitochondria associated 1 ISO RGD PMID:14526224 RGD:10047409 NCBI chr  X:119,256,425...119,292,612
Ensembl chr  X:129,550,287...129,586,271
JBrowse link
G AQP3 aquaporin 3 (Gill blood group) acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5551666|PMID:24462679) MGI
Ensembl
PMID:24462679 GO_REF:0000107 MGI:5551666 NCBI chr 9:33,221,989...33,228,469
Ensembl chr 9:34,032,983...34,039,438
JBrowse link
G ATF4 activating transcription factor 4 ISO RGD PMID:20444431 RGD:13464322 NCBI chr22:20,426,743...20,428,892
Ensembl chr22:38,248,094...38,249,249
JBrowse link
G CACNB3 calcium voltage-gated channel auxiliary subunit beta 3 ISO RGD PMID:23421680 RGD:13514095 NCBI chr12:39,918,022...39,931,386
Ensembl chr12:40,797,293...40,811,409
JBrowse link
G CBL Cbl proto-oncogene ISO RGD PMID:24229686 RGD:11038824 NCBI chr11:114,044,996...114,149,204
Ensembl chr11:117,973,187...118,074,671
JBrowse link
G DICER1 dicer 1, ribonuclease III ISO RGD PMID:26294080 RGD:11553310 NCBI chr14:75,709,029...75,780,779
Ensembl chr14:95,036,385...95,107,940
JBrowse link
G DNM1L dynamin 1 like ISO RGD PMID:23658809 RGD:12738215 NCBI chr12:53,476,553...53,541,421
Ensembl chr12:56,077,504...56,142,376
JBrowse link
G IREB2 iron responsive element binding protein 2 ISO RGD PMID:16135072 RGD:12904046 NCBI chr15:57,367,314...57,430,322
Ensembl chr15:76,331,610...76,394,476
JBrowse link
G LCN2 lipocalin 2 ISO RGD PMID:24916903 RGD:126790489 NCBI chr 9:99,259,278...99,274,494
Ensembl chr 9:127,940,799...127,944,798
JBrowse link
G MFN1 mitofusin 1 ISO RGD PMID:23658809 RGD:12738215 NCBI chr 3:176,378,175...176,423,943
Ensembl chr 3:184,552,108...184,596,763
JBrowse link
G MFN2 mitofusin 2 ISO RGD PMID:23658809 RGD:12738215 NCBI chr 1:10,729,933...10,764,865
Ensembl chr 1:11,945,880...11,981,077
JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase ISO RGD PMID:28528966 RGD:13781879 NCBI chr 7:98,227,071...98,262,254
Ensembl chr 7:110,952,876...110,981,967
JBrowse link
G PPP1R15A protein phosphatase 1 regulatory subunit 15A ISO RGD PMID:21525936 RGD:10054236 NCBI chr19:45,872,596...45,876,376
Ensembl chr19:54,880,141...54,883,003
JBrowse link
G TSC1 TSC complex subunit 1 involved_in ISO PMID:23435171 ParkinsonsUK-UCL PMID:23435171 RGD:10448950 NCBI chr 9:104,007,708...104,060,938
Ensembl chr 9:132,638,003...132,675,759
JBrowse link
cellular response to phosphate starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COMT catechol-O-methyltransferase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5510279|PMID:23863468) MGI
Ensembl
PMID:23863468 GO_REF:0000107 MGI:5510279 NCBI chr22:2,704,015...2,731,326
Ensembl chr22:18,375,434...18,402,387
JBrowse link
G SLC34A1 solute carrier family 34 member 1 involved_in ISO PMID:9058191 UniProt PMID:9058191 RGD:152025535 NCBI chr 5:172,685,862...172,700,440
Ensembl chr 5:179,748,492...179,762,975
JBrowse link
cellular response to potassium ion starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP11B1 cytochrome P450 family 11 subfamily B member 1 ISO RGD PMID:20685870 RGD:4891144 NCBI chr 8:139,584,976...139,592,466
Ensembl chr 8:142,629,127...142,634,654
JBrowse link
G HRK harakiri, BCL2 interacting protein ISO RGD PMID:17428807 RGD:2290488 NCBI chr12:114,432,755...114,458,044 JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:17428807 RGD:2290488 NCBI chr 1:58,042,794...58,045,536 JBrowse link
G PCK1 phosphoenolpyruvate carboxykinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3851650|PMID:19458124) MGI
Ensembl
PMID:19458124 GO_REF:0000107 MGI:3851650 NCBI chr20:53,901,738...53,907,090
Ensembl chr20:55,179,429...55,184,920
JBrowse link
G SLC38A3 solute carrier family 38 member 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3851650|PMID:19458124) MGI
Ensembl
PMID:19458124 GO_REF:0000107 MGI:3851650 NCBI chr 3:50,133,631...50,149,394
Ensembl chr 3:51,367,939...51,383,657
JBrowse link
cellular response to starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALB albumin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:50,773,244...50,790,474
Ensembl chr 4:56,605,322...56,622,418
JBrowse link
G AMBRA1 autophagy and beclin 1 regulator 1 ISO RGD PMID:25117440 RGD:11552604 NCBI chr11:46,355,026...46,556,091
Ensembl chr11:46,905,454...47,103,205
JBrowse link
G ATG14 autophagy related 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:35,953,228...35,998,650
Ensembl chr14:54,226,720...54,272,018
JBrowse link
G ATG4B autophagy related 4B cysteine peptidase involved_in ISO (MGI:5630037|PMID:25578879) ParkinsonsUK-UCL PMID:25578879 MGI:5630037 NCBI chr2B:128,913,323...128,950,112
Ensembl chr2B:247,702,880...247,738,977
JBrowse link
G ATG5 autophagy related 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5494529|PMID:22496425) MGI
Ensembl
PMID:22496425 GO_REF:0000107 MGI:5494529 NCBI chr 6:103,997,824...104,140,931
Ensembl chr 6:107,871,208...108,013,807
JBrowse link
G ATG7 autophagy related 7 involved_in
acts_upstream_of_or_within
ISO (PMID:20543840)
(MGI:5494529|PMID:22496425)
UniProt
MGI
PMID:20543840 PMID:22496425 MGI:5494529 NCBI chr 3:11,208,600...11,488,757
Ensembl chr 3:11,554,100...11,833,398
JBrowse link
G BMF Bcl2 modifying factor involved_in ISO (MGI:5490676|PMID:23629966) CAFA PMID:23629966 MGI:5490676 NCBI chr15:19,026,053...19,047,008
Ensembl chr15:37,281,655...37,302,075
JBrowse link
G BMPR2 bone morphogenetic protein receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:89,631,622...89,823,438
Ensembl chr2B:207,780,741...207,961,072
JBrowse link
G CADPS2 calcium dependent secretion activator 2 acts_upstream_of_or_within ISO (MGI:5468191|PMID:23260145) MGI PMID:23260145 MGI:5468191 NCBI chr 7:114,328,933...114,896,388
Ensembl chr 7:127,014,772...127,579,249
JBrowse link
G CARTPT CART prepropeptide involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 5:43,591,683...43,593,586
Ensembl chr 5:44,236,114...44,238,229
JBrowse link
G CAV1 caveolin 1 involved_in ISO (PMID:15657086) BHF-UCL PMID:15657086 NCBI chr 7:108,497,125...108,533,090
Ensembl chr 7:121,193,424...121,229,655
JBrowse link
G CLEC16A C-type lectin domain containing 16A involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:9,887,877...10,124,500
Ensembl chr16:11,109,869...11,343,512
JBrowse link
G CTSL cathepsin L ISO serum and potassium deprivation RGD PMID:16176344 RGD:2315590 NCBI chr 9:58,851,899...58,857,170
Ensembl chr 9:86,903,006...86,908,303
JBrowse link
G DNAJC15 DnaJ heat shock protein family (Hsp40) member C15 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5529421|PMID:23530063) MGI
Ensembl
PMID:23530063 GO_REF:0000107 MGI:5529421 NCBI chr13:24,193,185...24,276,813 JBrowse link
G DSC2 desmocollin 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5468191|PMID:23260145) MGI
Ensembl
PMID:23260145 GO_REF:0000107 MGI:5468191 NCBI chr18:24,296,505...24,332,997
Ensembl chr18:27,894,603...27,930,843
JBrowse link
G EHMT2 euchromatic histone lysine methyltransferase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23918802) MGI
Ensembl
PMID:23918802 GO_REF:0000107 NCBI chr 6:31,542,946...31,560,894
Ensembl chr 6:32,429,271...32,451,844
JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 acts_upstream_of_or_within ISO (MGI:3589702|PMID:15937339) MGI PMID:15937339 MGI:3589702 NCBI chr15:18,871,867...18,973,380
Ensembl chr15:37,120,044...37,229,211
JBrowse link
G ELAPOR1 endosome-lysosome associated apoptosis and autophagy regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:111,490,488...111,583,703
Ensembl chr 1:110,654,844...110,744,323
JBrowse link
G FADS1 fatty acid desaturase 1 involved_in ISO (PMID:10601301) UniProt PMID:10601301 NCBI chr11:57,101,553...57,116,243
Ensembl chr11:60,462,420...60,476,798
JBrowse link
G FBXO22 F-box protein 22 acts_upstream_of_or_within ISO (MGI:3840749|PMID:19319192) MGI PMID:19319192 MGI:3840749 NCBI chr15:54,817,076...54,849,271
Ensembl chr15:74,410,213...74,441,609
JBrowse link
G FLCN folliculin involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:34,057,127...34,081,637
Ensembl chr17:38,988,518...39,013,160
JBrowse link
G FNIP1 folliculin interacting protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5436190|PMID:22608497) MGI
Ensembl
PMID:22608497 GO_REF:0000107 MGI:5436190 NCBI chr 5:127,070,906...127,219,548
Ensembl chr 5:133,235,501...133,384,218
JBrowse link
G FOXA3 forkhead box A3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2153289|PMID:11546810) MGI
Ensembl
PMID:11546810 GO_REF:0000107 MGI:2153289 NCBI chr19:42,873,933...42,883,479
Ensembl chr19:51,410,473...51,418,744
JBrowse link
G FOXO1 forkhead box O1 involved_in ISO (PMID:20543840) UniProt PMID:20543840 NCBI chr13:21,763,729...21,874,279 JBrowse link
G GAS2L1 growth arrest specific 2 like 1 involved_in ISO (MGI:3052497|PMID:12584248) UniProt PMID:12584248 MGI:3052497 NCBI chr22:10,362,391...10,368,173
Ensembl chr22:28,169,387...28,175,278
JBrowse link
G GCGR glucagon receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5474727|PMID:23209793) ARUK-UCL
Ensembl
PMID:23209793 GO_REF:0000107 MGI:5474727 NCBI chr17:76,205,023...76,220,171
Ensembl chr17:81,912,135...81,922,906
JBrowse link
G GLUL glutamate-ammonia ligase acts_upstream_of_or_within ISO (MGI:5468191|PMID:23260145) MGI PMID:23260145 MGI:5468191 NCBI chr 1:157,882,258...157,891,562
Ensembl chr 1:161,534,106...161,543,411
JBrowse link
G INHBB inhibin subunit beta B involved_in ISO (MGI:4821933|PMID:19491194) UniProt PMID:19491194 MGI:4821933 NCBI chr2B:7,278,944...7,284,632 JBrowse link
G JMY junction mediating and regulatory protein, p53 cofactor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:35,981,666...36,076,428
Ensembl chr 5:36,261,971...36,567,349
JBrowse link
G KLF10 KLF transcription factor 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:99,302,943...99,310,099
Ensembl chr 8:101,462,915...101,469,982
JBrowse link
G KRT20 keratin 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:16,396,544...16,408,104
Ensembl chr17:16,624,068...16,633,359
JBrowse link
G LAMP2 lysosomal associated membrane protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:109,700,185...109,743,579
Ensembl chr  X:119,886,982...119,929,896
JBrowse link
G LOC100986388 aldo-keto reductase family 1 member C3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:5,079,580...5,157,572
Ensembl chr10:5,081,214...5,139,812
JBrowse link
G LRRK2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:48,343,621...48,488,337
Ensembl chr12:49,205,930...49,350,462
JBrowse link
G MAP1LC3A microtubule associated protein 1 light chain 3 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:30,887,345...30,888,986
Ensembl chr20:32,010,284...32,020,411
JBrowse link
G MAP1LC3B microtubule associated protein 1 light chain 3 beta involved_in ISO (PMID:28223137), (PMID:30420355) UniProt PMID:28223137 PMID:30420355 NCBI chr16:68,063,869...68,076,772 JBrowse link
G MAP1LC3C microtubule associated protein 1 light chain 3 gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:217,558,010...217,562,485
Ensembl chr 1:222,537,401...222,541,244
JBrowse link
G MARS1 methionyl-tRNA synthetase 1 involved_in ISO (PMID:10791971) CAFA PMID:10791971 NCBI chr12:31,410,231...31,438,015
Ensembl chr12:31,668,708...31,693,839
JBrowse link
G MAX MYC associated factor X ISO serum deprivation RGD PMID:10446908 RGD:2316822 NCBI chr14:45,588,366...45,683,828
Ensembl chr14:64,535,120...64,562,671
JBrowse link
G MFSD2A major facilitator superfamily domain containing 2A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5474727|PMID:23209793) ARUK-UCL
Ensembl
PMID:23209793 GO_REF:0000107 MGI:5474727 NCBI chr 1:39,244,438...39,259,156
Ensembl chr 1:40,569,706...40,584,438
JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:9,871,700...10,028,704
Ensembl chr 1:11,093,765...11,249,841
JBrowse link
G MYH13 myosin heavy chain 13 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3840749|PMID:19319192) MGI
Ensembl
PMID:19319192 GO_REF:0000107 MGI:3840749 NCBI chr17:41,288,536...41,351,827
Ensembl chr17:46,035,614...46,098,800
JBrowse link
G MYOD1 myogenic differentiation 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3840749|PMID:19319192) MGI
Ensembl
PMID:19319192 GO_REF:0000107 MGI:3840749 NCBI chr11:17,772,317...17,774,884
Ensembl chr11:17,456,124...17,458,690
JBrowse link
G NUPR2 nuclear protein 2, transcriptional regulator involved_in ISO (PMID:25899918) UniProt PMID:25899918 NCBI chr 7:56,727,702...56,729,433 JBrowse link
G PCSK9 proprotein convertase subtilisin/kexin type 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:54,323,036...54,355,397
Ensembl chr 1:55,911,016...55,936,456
JBrowse link
G PDK4 pyruvate dehydrogenase kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:87,540,600...87,553,673
Ensembl chr 7:101,128,060...101,141,157
JBrowse link
G PIK3C2A phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha acts_upstream_of_or_within ISO (MGI:5565574|PMID:24098492) MGI PMID:24098492 MGI:5565574 NCBI chr11:17,143,024...17,263,920
Ensembl chr11:16,828,966...16,949,856
JBrowse link
G PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5565574|PMID:24098492) MGI
Ensembl
PMID:24098492 GO_REF:0000107 MGI:5565574 NCBI chr 1:180,024,889...180,096,287
Ensembl chr 1:184,313,233...184,384,454
JBrowse link
G PIK3C3 phosphatidylinositol 3-kinase catalytic subunit type 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5565574|PMID:24098492) MGI
Ensembl
PMID:24098492 GO_REF:0000107 MGI:5565574 NCBI chr18:35,203,896...35,336,512
Ensembl chr18:38,754,789...38,882,037
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha involved_in IEA Ensembl GO_REF:0000107 Ensembl chr22:45,218,364...45,302,970 JBrowse link
G PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D ISO RGD PMID:23520533 RGD:8693590 NCBI chr17:54,698,338...54,761,889
Ensembl chr17:59,824,566...59,887,015
JBrowse link
G RALB RAS like proto-oncogene B involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:7,185,192...7,227,220
Ensembl chr2B:120,748,123...120,802,698
JBrowse link
G RIPOR1 RHO family interacting cell polarization regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:47,872,769...47,890,776
Ensembl chr16:67,268,180...67,278,445
JBrowse link
G RNASE4 ribonuclease A family member 4 acts_upstream_of_or_within ISO (MGI:5468191|PMID:23260145) MGI PMID:23260145 MGI:5468191 NCBI chr14:1,548,729...1,564,819
Ensembl chr14:19,620,758...19,621,201
JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in ISO (PMID:11932307), (PMID:9724099) UniProt PMID:9724099 PMID:11932307 NCBI chr 8:40,507,027...40,555,053 JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069
JBrowse link
G SPHK1 sphingosine kinase 1 ISO RGD PMID:16959847 RGD:2311370 NCBI chr17:70,331,370...70,336,043
Ensembl chr17:75,883,329...75,886,481
JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 ISO serum-free culture RGD PMID:9729333 RGD:1600064 NCBI chr 5:6,953,795...6,996,010
Ensembl chr 5:6,629,093...6,664,264
JBrowse link
G SREBF1 sterol regulatory element binding transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:33,458,196...33,484,643
Ensembl chr17:38,405,794...38,432,045
JBrowse link
G SREBF2 sterol regulatory element binding transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:22,725,790...22,799,749
Ensembl chr22:40,811,459...40,884,947
JBrowse link
G STK24 serine/threonine kinase 24 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:79,614,662...79,744,772
Ensembl chr13:98,764,900...98,837,807
JBrowse link
G STK26 serine/threonine kinase 26 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:121,155,443...121,207,906
Ensembl chr  X:131,463,187...131,515,429
JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (MGI:5468191|PMID:23260145) MGI PMID:23260145 MGI:5468191 NCBI chr10:109,541,524...109,759,499
Ensembl chr10:112,978,167...113,192,281
JBrowse link
G TFEB transcription factor EB involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:41,268,169...41,320,822
Ensembl chr 6:42,574,416...42,627,031
JBrowse link
G TNRC6A trinucleotide repeat containing adaptor 6A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3510094|PMID:15494374) MGI
Ensembl
PMID:15494374 GO_REF:0000107 MGI:3510094 Ensembl chr16:24,966,474...25,064,998 JBrowse link
G TTC5 tetratricopeptide repeat domain 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:1,163,280...1,180,212
Ensembl chr14:19,216,993...19,233,797
JBrowse link
G USP33 ubiquitin specific peptidase 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:76,914,795...76,980,639
Ensembl chr 1:78,999,339...79,065,082
JBrowse link
G WDR45 WD repeat domain 45 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:41,372,722...41,400,441
Ensembl chr  X:49,224,864...49,233,960
JBrowse link
G WDR45B WD repeat domain 45B involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:77,028,543...77,058,075
Ensembl chr17:82,829,546...82,863,803
JBrowse link
G WIPI1 WD repeat domain, phosphoinositide interacting 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:62,357,952...62,394,620
Ensembl chr17:67,748,201...67,784,389
JBrowse link
G WIPI2 WD repeat domain, phosphoinositide interacting 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:5,446,621...5,488,170
Ensembl chr 7:5,467,334...5,510,538
JBrowse link
G WNT2B Wnt family member 2B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5468191|PMID:23260145) MGI
Ensembl
PMID:23260145 GO_REF:0000107 MGI:5468191 NCBI chr 1:115,119,360...115,177,942
Ensembl chr 1:125,173,906...125,230,675
JBrowse link
G WNT4 Wnt family member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5468191|PMID:23260145) MGI
Ensembl
PMID:23260145 GO_REF:0000107 MGI:5468191 NCBI chr 1:21,310,228...21,335,985
Ensembl chr 1:22,255,056...22,268,801
JBrowse link
G WNT9B Wnt family member 9B acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5468191|PMID:23260145) MGI
Ensembl
PMID:23260145 GO_REF:0000107 MGI:5468191 NCBI chr17:10,616,957...10,651,954 JBrowse link
G WRN WRN RecQ like helicase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11420665) MGI
Ensembl
PMID:11420665 GO_REF:0000107 NCBI chr 8:30,353,643...30,492,978
Ensembl chr 8:27,541,145...27,679,855
JBrowse link
G ZFYVE1 zinc finger FYVE-type containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:53,550,688...53,608,297
Ensembl chr14:72,414,810...72,471,578
JBrowse link
cellular response to vitamin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRIP1 BRCA1 interacting helicase 1 ISO RGD PMID:16771696 RGD:2326085 NCBI chr17:55,786,568...55,973,366
Ensembl chr17:60,901,073...61,083,462
JBrowse link
cellular response to vitamin A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LTC4S leukotriene C4 synthase ISO RGD PMID:12767051 RGD:724432 NCBI chr 5:174,946,346...174,950,805 JBrowse link
cellular response to vitamin B1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MDM2 MDM2 proto-oncogene ISO RGD PMID:15656374 RGD:2317394 NCBI chr12:66,322,340...66,357,010
Ensembl chr12:69,102,084...69,133,278
JBrowse link
cellular response to vitamin B3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIRT1 sirtuin 1 ISO RGD PMID:23555824 RGD:10047117 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069
JBrowse link
cellular response to vitamin D term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif 1 ISO RGD PMID:11108265 RGD:9681746 NCBI chr21:13,270,668...13,279,217
Ensembl chr21:26,656,370...26,665,485
JBrowse link
G ATP2B1 ATPase plasma membrane Ca2+ transporting 1 ISO RGD PMID:11277270 RGD:2317730 NCBI chr12:87,107,900...87,229,514
Ensembl chr12:90,427,560...90,495,320
JBrowse link
G BGLAP bone gamma-carboxyglutamate protein ISO RGD PMID:3257212 PMID:6607920 RGD:2316174 RGD:6483560 NCBI chr 1:131,583,789...131,586,459
Ensembl chr 1:135,413,871...135,416,432
JBrowse link
G CASR calcium sensing receptor ISO 1,25-dihydroxycholecalciferol (calcitriol) RGD PMID:21940515 RGD:7205697 NCBI chr 3:119,278,071...119,383,901
Ensembl chr 3:126,252,765...126,285,268
JBrowse link
G CYP24A1 cytochrome P450 family 24 subfamily A member 1 ISO RGD PMID:28104492 RGD:151665513 NCBI chr20:50,500,103...50,520,487
Ensembl chr20:51,721,685...51,742,716
JBrowse link
G FES FES proto-oncogene, tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:69,576,936...69,588,834
Ensembl chr15:88,774,965...88,786,965
JBrowse link
G FGF23 fibroblast growth factor 23 ISO RGD PMID:23263654 RGD:10044209 NCBI chr12:4,479,116...4,488,797
Ensembl chr12:4,400,802...4,412,000
JBrowse link
G FZD1 frizzled class receptor 1 ISO RGD PMID:1334084 RGD:61590 NCBI chr 7:83,269,906...83,277,608 JBrowse link
G FZD2 frizzled class receptor 2 ISO RGD PMID:1334084 RGD:61590 NCBI chr17:12,839,362...12,843,803 JBrowse link
G GDAP1 ganglioside induced differentiation associated protein 1 ISO RGD PMID:25449168 RGD:12738378 NCBI chr 8:70,854,665...70,900,532
Ensembl chr 8:72,528,869...72,545,346
JBrowse link
G IL15 interleukin 15 ISO RGD PMID:15637289 RGD:2311387 NCBI chr 4:133,693,995...134,115,470
Ensembl chr 4:145,402,111...145,416,622
JBrowse link
G ITGB1 integrin subunit beta 1 ISO calcitriol RGD PMID:20304064 RGD:2325261 NCBI chr10:33,023,573...33,081,384
Ensembl chr10:33,608,978...33,644,031
JBrowse link
G KDM6A lysine demethylase 6A ISO RGD PMID:31907922 RGD:151665135 NCBI chr  X:37,313,000...37,548,630
Ensembl chr  X:45,127,382...45,362,029
JBrowse link
G LOC100977568 tenascin ISO RGD PMID:10502285 RGD:4889620 NCBI chr 9:86,125,672...86,222,804
Ensembl chr 9:114,486,778...114,584,299
JBrowse link
G LTBP1 latent transforming growth factor beta binding protein 1 ISO RGD PMID:10025676 RGD:10412059 NCBI chr2A:32,956,937...33,409,286
Ensembl chr2A:33,667,191...34,120,602
JBrowse link
G MMP1 matrix metallopeptidase 1 ISO RGD PMID:22064970 RGD:7207281 NCBI chr11:97,730,545...97,739,190
Ensembl chr11:101,221,393...101,230,104
JBrowse link
G NOS2 nitric oxide synthase 2 ISO RGD PMID:18534083 RGD:4891908 NCBI chr17:28,984,295...29,021,516
Ensembl chr17:29,471,510...29,617,093
JBrowse link
G PDIA3 protein disulfide isomerase family A member 3 ISO RGD PMID:15862831 RGD:9999173 NCBI chr15:22,706,520...22,731,672
Ensembl chr15:40,794,144...40,821,763
JBrowse link
G PENK proenkephalin ISO RGD PMID:8584038 RGD:10003035 NCBI chr 8:52,864,388...52,870,144
Ensembl chr 8:50,234,170...50,239,949
JBrowse link
G PHEX phosphate regulating endopeptidase X-linked ISO RGD PMID:15337762 RGD:11556251 NCBI chr  X:14,663,847...14,859,294
Ensembl chr  X:22,017,681...22,232,501
JBrowse link
G PTN pleiotrophin ISO RGD PMID:21153232 RGD:9831436 NCBI chr 7:129,184,786...129,300,815
Ensembl chr 7:141,701,430...141,705,623
JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in ISO (PMID:16149051) UniProt PMID:16149051 NCBI chr 8:40,507,027...40,555,053 JBrowse link
G SULT2A1 sulfotransferase family 2A member 1 ISO RGD PMID:14978251 RGD:2317006 NCBI chr19:44,864,747...44,880,688
Ensembl chr19:53,517,248...53,532,573
JBrowse link
G TREM1 triggering receptor expressed on myeloid cells 1 ISO RGD PMID:29331667 RGD:127284861 NCBI chr 6:40,861,283...40,874,446
Ensembl chr 6:42,163,337...42,183,091
JBrowse link
G VDR vitamin D receptor ISO RGD PMID:9753201 RGD:8158092 NCBI chr12:40,828,413...40,891,700
Ensembl chr12:41,702,742...41,766,192
JBrowse link
cellular response to vitamin E term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL1A1 collagen type I alpha 1 chain ISO RGD PMID:23722449 RGD:8552711 NCBI chr17:44,274,349...44,291,764
Ensembl chr17:49,150,677...49,166,677
JBrowse link
G COL2A1 collagen type II alpha 1 chain ISO RGD PMID:23722449 RGD:8552711 NCBI chr12:40,726,137...40,757,690 JBrowse link
G PAWR pro-apoptotic WT1 regulator ISO RGD PMID:10428045 RGD:9835341 NCBI chr12:77,114,282...77,224,116
Ensembl chr12:79,969,517...80,070,796
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma ISO RGD PMID:11752099 RGD:8553036 NCBI chr 3:12,215,322...12,361,669
Ensembl chr 3:12,622,397...12,705,060
JBrowse link
cellular response to vitamin K term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL5 C-C motif chemokine ligand 5 ISO menadione (K3) RGD PMID:19291322 RGD:4889997 NCBI chr17:20,915,198...20,923,530
Ensembl chr17:21,210,798...21,219,172
JBrowse link
G POSTN periostin involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:18,779,297...18,815,207
Ensembl chr13:37,368,030...37,407,212
JBrowse link
cellular response to water deprivation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP2 aquaporin 2 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:1328377|PMID:10191086) RGD
Ensembl
MGI
PMID:10191086 PMID:15196935 GO_REF:0000107 MGI:1328377 RGD:2313141 NCBI chr12:38,796,300...38,804,559
Ensembl chr12:39,690,289...39,698,397
JBrowse link
G AVPR1A arginine vasopressin receptor 1A ISO RGD PMID:11796498 RGD:70387 NCBI chr12:25,793,633...25,803,026
Ensembl chr12:26,065,882...26,075,972
JBrowse link
G SIPA1 signal-induced proliferation-associated 1 ISO RGD PMID:15196935 RGD:2313141 NCBI chr11:60,997,292...61,010,155
Ensembl chr11:64,335,136...64,344,955
JBrowse link
cellular response to zinc ion starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACP5 acid phosphatase 5, tartrate resistant ISO RGD PMID:21893222 RGD:151667428 NCBI chr19:11,120,451...11,125,167
Ensembl chr19:11,832,575...11,835,203
JBrowse link
G BGLAP bone gamma-carboxyglutamate protein ISO RGD PMID:21893222 RGD:151667428 NCBI chr 1:131,583,789...131,586,459
Ensembl chr 1:135,413,871...135,416,432
JBrowse link
G CTNNB1 catenin beta 1 ISO RGD PMID:21893222 RGD:151667428 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030
JBrowse link
G CTSK cathepsin K ISO RGD PMID:21893222 RGD:151667428 NCBI chr 1:126,146,555...126,158,662
Ensembl chr 1:129,795,966...129,808,316
JBrowse link
G DLX5 distal-less homeobox 5 ISO RGD PMID:21893222 RGD:151667428 NCBI chr 7:88,972,066...88,977,588
Ensembl chr 7:102,555,267...102,561,186
JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:21893222 RGD:151667428 NCBI chr14:55,832,570...55,835,984
Ensembl chr14:74,676,316...74,679,766
JBrowse link
G IGF1 insulin like growth factor 1 ISO RGD PMID:21893222 RGD:151667428 NCBI chr12:99,986,887...100,066,773
Ensembl chr12:103,385,911...103,462,177
JBrowse link
G IGF1R insulin like growth factor 1 receptor ISO RGD PMID:21893222 RGD:151667428 NCBI chr15:77,332,926...77,648,474
Ensembl chr15:96,535,164...96,832,974
JBrowse link
G INSR insulin receptor ISO RGD PMID:21893222 RGD:151667428 NCBI chr19:6,393,407...6,578,234
Ensembl chr19:7,260,246...7,414,889
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:21893222 RGD:151667428 NCBI chr 1:58,042,794...58,045,536 JBrowse link
G MITF melanocyte inducing transcription factor ISO RGD PMID:21893222 RGD:151667428 NCBI chr 3:69,674,064...69,902,078
Ensembl chr 3:71,037,665...71,265,445
JBrowse link
G RUNX2 RUNX family transcription factor 2 ISO RGD PMID:21893222 RGD:151667428 NCBI chr 6:45,003,962...45,133,148
Ensembl chr 6:46,189,432...46,524,389
JBrowse link
G SLC39A4 solute carrier family 39 member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3522410|PMID:15358787) MGI
Ensembl
PMID:15358787 GO_REF:0000107 MGI:3522410 NCBI chr 8:141,178,792...141,183,565
Ensembl chr 8:144,169,089...144,173,517
JBrowse link
G SLC39A5 solute carrier family 39 member 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3522410|PMID:15358787) MGI
Ensembl
PMID:15358787 GO_REF:0000107 MGI:3522410 NCBI chr12:32,677,330...32,685,316
Ensembl chr12:32,929,033...32,936,158
JBrowse link
G SP1 Sp1 transcription factor ISO RGD PMID:21893222 RGD:151667428 NCBI chr12:35,338,492...35,374,462
Ensembl chr12:36,127,681...36,158,356
JBrowse link
G SP7 Sp7 transcription factor ISO RGD PMID:21893222 RGD:151667428 NCBI chr12:35,409,055...35,427,871
Ensembl chr12:36,199,673...36,209,494
JBrowse link
G TNFRSF11A TNF receptor superfamily member 11a ISO RGD PMID:21893222 RGD:151667428 NCBI chr18:55,695,394...55,761,307
Ensembl chr18:59,034,770...59,075,044
JBrowse link
DNA protection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:29,361,519...29,385,610
Ensembl chr21:42,670,530...42,690,932
JBrowse link
G DCTPP1 dCTP pyrophosphatase 1 involved_in IEA UniProt
Ensembl
GO_REF:0000104 GO_REF:0000107 NCBI chr16:24,538,023...24,545,426
Ensembl chr16:30,794,268...30,802,179
JBrowse link
G ERCC6 ERCC excision repair 6, chromatin remodeling factor ISO RGD PMID:31644904 RGD:126925983 NCBI chr10:44,703,720...44,784,948 JBrowse link
G NUDT1 nudix hydrolase 1 involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr 7:2,511,573...2,520,643
Ensembl chr 7:2,614,005...2,621,997
JBrowse link
G NUDT15 nudix hydrolase 15 NOT|involved_in ISO
IEA
(PMID:26238318) UniProt
Ensembl
PMID:26238318 GO_REF:0000107 NCBI chr13:29,189,459...29,198,825
Ensembl chr13:47,891,557...47,900,971
JBrowse link
negative regulation of transcription from RNA polymerase II promoter by glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXA2 forkhead box A2 involved_in ISO (MGI:5142372|PMID:11875061) BHF-UCL PMID:11875061 MGI:5142372 NCBI chr20:22,519,942...22,524,262 JBrowse link
negative regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KANK2 KN motif and ankyrin repeat domains 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:10,713,582...10,746,371
Ensembl chr19:11,426,149...11,457,359
JBrowse link
G SNAI2 snail family transcriptional repressor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:45,341,857...45,345,544
Ensembl chr 8:42,723,971...42,730,904
JBrowse link
positive regulation of transcription by glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SRF serum response factor ISO RGD PMID:20655308 RGD:5131625 NCBI chr 6:42,763,099...42,773,332
Ensembl chr 6:44,057,192...44,066,768
JBrowse link
positive regulation of transcription from RNA polymerase II promoter by galactose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NCOA1 nuclear receptor coactivator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:24,485,068...24,764,135
Ensembl chr2A:24,733,117...24,859,488
JBrowse link
positive regulation of transcription from RNA polymerase II promoter by glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXA2 forkhead box A2 involved_in ISO (MGI:5142372|PMID:11875061) BHF-UCL PMID:11875061 MGI:5142372 NCBI chr20:22,519,942...22,524,262 JBrowse link
G LOC100985851 upstream stimulatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:136,451,829...136,458,543
Ensembl chr 1:140,365,500...140,371,861
JBrowse link
G USF2 upstream transcription factor 2, c-fos interacting involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:32,215,305...32,226,172 JBrowse link
positive regulation of translational initiation in response to starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:2149467|PMID:10655230)
(MGI:3589053|PMID:16121183)
UniProt PMID:10655230 PMID:16121183 MGI:2149467 MGI:3589053 NCBI chr15:18,871,867...18,973,380
Ensembl chr15:37,120,044...37,229,211
JBrowse link
G IMPACT impact RWD domain protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:17,678,297...17,720,348
Ensembl chr18:21,299,213...21,322,868
JBrowse link
positive regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP27B1 cytochrome P450 family 27 subfamily B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:31,158,814...31,164,462
Ensembl chr12:31,419,773...31,424,822
JBrowse link
G MN1 MN1 proto-oncogene, transcriptional regulator involved_in ISO (PMID:15890672) UniProt PMID:15890672 NCBI chr22:8,799,832...8,854,695 JBrowse link
G RXRA retinoid X receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:105,424,046...105,539,241
Ensembl chr 9:134,082,865...134,144,704
JBrowse link
G SNW1 SNW domain containing 1 involved_in ISO (PMID:11514567), (PMID:9632709) UniProt PMID:9632709 PMID:11514567 NCBI chr14:58,271,830...58,315,773
Ensembl chr14:77,472,387...77,517,315
JBrowse link
G VDR vitamin D receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:40,828,413...40,891,700
Ensembl chr12:41,702,742...41,766,192
JBrowse link
regulation of cell growth by extracellular stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIF26A kinesin family member 26A involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:84,762,903...84,807,440
Ensembl chr14:104,570,327...104,611,245
JBrowse link
G MYOCD myocardin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2136697|PMID:11439182) MGI
Ensembl
PMID:11439182 GO_REF:0000107 MGI:2136697 NCBI chr17:38,880,120...38,983,246
Ensembl chr17:43,584,259...43,681,659
JBrowse link
regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MED1 mediator complex subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3655015|PMID:16324150) MGI
Ensembl
PMID:16324150 GO_REF:0000107 MGI:3655015 NCBI chr17:17,836,350...17,883,610
Ensembl chr17:18,050,474...18,095,118
JBrowse link
G SNW1 SNW domain containing 1 involved_in ISO (PMID:14985122) UniProt PMID:14985122 NCBI chr14:58,271,830...58,315,773
Ensembl chr14:77,472,387...77,517,315
JBrowse link
G TRIM24 tripartite motif containing 24 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3776949|PMID:18287084) MGI
Ensembl
PMID:18287084 GO_REF:0000107 MGI:3776949 NCBI chr 7:130,420,334...130,547,489
Ensembl chr 7:142,909,009...143,036,526
JBrowse link
vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PIM1 Pim-1 proto-oncogene, serine/threonine kinase involved_in ISO (PMID:22720752) CACAO PMID:22720752 NCBI chr 6:36,730,669...36,735,954 JBrowse link
G VDR vitamin D receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:40,828,413...40,891,700
Ensembl chr12:41,702,742...41,766,192
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15365
    response to stimulus 7902
      response to external stimulus 2748
        cellular response to external stimulus 415
          cellular response to external biotic stimulus 2
          cellular response to extracellular stimulus + 309
          cellular response to mechanical stimulus 118
paths to the root