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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to external stimulus
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Accession:GO:0071496 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external stimulus.
Comment:Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.



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cell-cell adhesion in response to extracellular stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itga4 integrin subunit alpha 4 involved_in ISO UniProtKB:P19320|UniProtKB:Q15109 (PMID:11078691) RGD PMID:11078691 NCBI chr 3:64,162,764...64,235,010
Ensembl chr 3:64,163,085...64,233,715
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 involved_in ISO UniProtKB:P13612|UniProtKB:Q15109 (PMID:11078691) RGD PMID:11078691 NCBI chr 2:204,038,120...204,057,852
Ensembl chr 2:204,038,114...204,057,958
JBrowse link
cellular response to amino acid starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf3 activating transcription factor 3 involved_in ISO (MGI:3722921|PMID:14729979) RGD PMID:14729979 MGI:3722921 NCBI chr13:102,751,278...102,800,520
Ensembl chr13:102,751,321...102,764,631
JBrowse link
G Atf4 activating transcription factor 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:3582244|PMID:11106749), (MGI:3722921|PMID:14729979), (MGI:3798818|PMID:12667446)
UniProt
RGD
PMID:11106749 PMID:12667446 PMID:14729979 GO_REF:0000024 MGI:3582244 MGI:3722921 MGI:3798818 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
JBrowse link
G Becn1 beclin 1 IEP RGD PMID:22835012 RGD:11561942 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Bmt2 base methyltransferase of 25S rRNA 2 homolog involved_in ISO (PMID:29123071) RGD PMID:29123071 NCBI chr 4:41,881,630...41,945,472
Ensembl chr 4:41,879,993...41,945,539
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A involved_in ISO (PMID:26102367)
(MGI:5700278|PMID:26102367)
RGD PMID:26102367 MGI:5700278 NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585
JBrowse link
G Dap death-associated protein involved_in ISO
IBA
(PMID:20537536)
PMID:21873635
RGD PMID:20537536 PMID:21873635 RGD:13792537 NCBI chr 2:82,199,206...82,251,771
Ensembl chr 2:82,199,280...82,251,752
JBrowse link
G Dapl1 death associated protein-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:43,960,993...43,980,940
Ensembl chr 3:43,960,810...43,980,940
JBrowse link
G Depdc5 DEP domain containing 5, GATOR1 subcomplex subunit involved_in IBA
ISO
PMID:21873635
(PMID:23723238)
RGD PMID:23723238 PMID:21873635 RGD:13792537 NCBI chr14:77,732,297...77,862,924
Ensembl chr14:77,732,297...77,862,794
JBrowse link
G Eif2ak2 eukaryotic translation initiation factor 2-alpha kinase 2 involved_in ISO
IEA
(PMID:25329545)
GO_REF:0000107
RGD
Ensembl
PMID:25329545 GO_REF:0000107 NCBI chr 6:16,189,000...16,224,972
Ensembl chr 6:16,188,979...16,224,971
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:25329545)
UniProt
RGD
PMID:25329545 GO_REF:0000024 NCBI chr 4:102,805,495...102,866,914
Ensembl chr 4:102,805,510...102,866,911
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (PMID:25329545)
(MGI:3722921|PMID:14729979), (MGI:5576818|PMID:24333428)
RGD PMID:14729979 PMID:24333428 PMID:25329545 MGI:3722921 MGI:5576818 NCBI chr 3:105,356,261...105,441,630
Ensembl chr 3:105,356,261...105,441,630
JBrowse link
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha involved_in ISS
ISO
GO_REF:0000024
(MGI:3582244|PMID:11106749)
UniProt
RGD
PMID:11106749 GO_REF:0000024 MGI:3582244 NCBI chr 6:97,672,829...97,697,499
Ensembl chr 6:97,672,766...97,706,225
JBrowse link
G Fas Fas cell surface death receptor involved_in ISO (PMID:11096076) RGD PMID:11096076 NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
JBrowse link
G Flcn folliculin involved_in ISO
ISS
(PMID:24095279), (PMID:27113757), (PMID:31672913)
GO_REF:0000024
RGD
UniProt
PMID:24095279 PMID:27113757 PMID:31672913 GO_REF:0000024 NCBI chr10:44,588,621...44,607,808
Ensembl chr10:44,588,624...44,607,769
JBrowse link
G Gcn1 GCN1 activator of EIF2AK4 involved_in ISO (MGI:5576818|PMID:24333428) RGD PMID:24333428 MGI:5576818 NCBI chr12:40,991,512...41,052,661
Ensembl chr12:40,991,512...41,052,555
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L IDA RGD PMID:19273590 RGD:9999430 NCBI chr 1:84,098,558...84,111,568
Ensembl chr 1:84,100,879...84,111,553
JBrowse link
G Impact impact RWD domain protein involved_in ISS
ISO
GO_REF:0000024
(MGI:5576818|PMID:24333428)
UniProt
RGD
PMID:24333428 GO_REF:0000024 MGI:5576818 NCBI chr18:4,108,872...4,147,571
Ensembl chr18:4,108,853...4,147,569
JBrowse link
G Itfg2 integrin alpha FG-GAP repeat containing 2 involved_in ISO (PMID:28199306) RGD PMID:28199306 NCBI chr 4:161,684,249...161,698,315
Ensembl chr 4:161,684,249...161,698,422
JBrowse link
G Kics2 KICSTOR subunit 2 involved_in IBA
ISO
PMID:21873635
(PMID:28199306)
RGD PMID:28199306 PMID:21873635 RGD:13792537 NCBI chr 7:57,284,213...57,299,070
Ensembl chr 7:57,284,192...57,297,486
JBrowse link
G Kptn kaptin (actin binding protein) involved_in ISO
IBA
(PMID:28199306)
PMID:21873635
RGD PMID:28199306 PMID:21873635 RGD:13792537 NCBI chr 1:76,808,737...76,809,531 JBrowse link
G Lars1 leucyl-tRNA synthetase 1 involved_in ISO (PMID:22424946) RGD PMID:22424946 NCBI chr18:34,201,555...34,256,003
Ensembl chr18:34,201,549...34,255,931
JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha IEP RGD PMID:22835012 RGD:11561942 NCBI chr 3:143,783,024...143,784,670
Ensembl chr 3:143,783,024...143,784,670
JBrowse link
G Map3k5 mitogen-activated protein kinase kinase kinase 5 involved_in ISO (PMID:11096076) RGD PMID:11096076 NCBI chr 1:14,685,776...14,904,935
Ensembl chr 1:14,685,492...14,904,800
JBrowse link
G Mapk1 mitogen activated protein kinase 1 involved_in ISO (PMID:11096076) RGD PMID:11096076 NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616
JBrowse link
G Mapk3 mitogen activated protein kinase 3 involved_in ISO (PMID:11096076) RGD PMID:11096076 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in ISO
IEA
(PMID:11096076)
GO_REF:0000107
RGD
Ensembl
PMID:11096076 GO_REF:0000107 NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981
JBrowse link
G Mios meiosis regulator for oocyte development involved_in ISO
IBA
(PMID:23723238)
PMID:21873635
RGD PMID:23723238 PMID:21873635 RGD:13792537 NCBI chr 4:36,263,419...36,289,546
Ensembl chr 4:36,263,968...36,289,544
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO
ISS
(PMID:22343943), (PMID:22424946), (PMID:22576015), (PMID:22692423)
GO_REF:0000024
RGD
UniProt
PMID:22343943 PMID:22424946 PMID:22576015 PMID:22692423 GO_REF:0000024 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Nprl2 NPR2-like, GATOR1 complex subunit involved_in ISO
IBA
(PMID:23723238)
PMID:21873635
RGD PMID:23723238 PMID:21873635 RGD:13792537 NCBI chr 8:108,215,823...108,218,996
Ensembl chr 8:108,215,814...108,218,996
JBrowse link
G Nprl3 NPR3-like, GATOR1 complex subunit involved_in IBA
ISO
PMID:21873635
(PMID:23723238)
RGD PMID:23723238 PMID:21873635 RGD:13792537 NCBI chr10:15,355,361...15,395,812
Ensembl chr10:15,355,355...15,395,810
JBrowse link
G Prkd1 protein kinase D1 involved_in ISO (PMID:22095288) RGD PMID:22095288 NCBI chr 6:67,725,193...68,039,002
Ensembl chr 6:67,725,905...68,039,042
JBrowse link
G Rnf152 ring finger protein 152 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5644195|PMID:25936802)
GO_REF:0000024
(PMID:25936802)
RGD
UniProt
PMID:25936802 PMID:21873635 GO_REF:0000024 MGI:5644195, RGD:13792537 NCBI chr13:21,324,039...21,403,405
Ensembl chr13:21,323,824...21,403,113
JBrowse link
G Rpl17 ribosomal protein L17 IEP RGD PMID:8144559 RGD:1304507 NCBI chr18:68,581,147...68,584,253
Ensembl chr18:68,581,098...68,584,253
JBrowse link
G Rps25 ribosomal protein s25 IEP RGD PMID:8144559 RGD:1304507 NCBI chr 8:44,733,623...44,735,999
Ensembl chr 8:44,733,029...44,737,271
JBrowse link
G Rraga Ras-related GTP binding A involved_in ISS
ISO
GO_REF:0000024
(PMID:25936802)
UniProt
RGD
PMID:25936802 GO_REF:0000024 NCBI chr 5:101,113,341...101,114,936
Ensembl chr 5:101,112,859...101,114,510
JBrowse link
G RragB Ras-related GTP binding B involved_in ISO UniProtKB:Q9HB90 (PMID:23723238) RGD PMID:23723238 NCBI chr  X:18,184,619...18,234,639
Ensembl chr  X:18,184,992...18,234,639
JBrowse link
G Rragc Ras-related GTP binding C involved_in ISO UniProtKB:Q5VZM2 (PMID:23723238) RGD PMID:23723238 NCBI chr 5:136,148,239...136,167,773
Ensembl chr 5:136,148,276...136,167,767
JBrowse link
G Seh1l SEH1-like nucleoporin involved_in ISO (PMID:23723238) RGD PMID:23723238
G Sesn1 sestrin 1 involved_in ISO (PMID:25263562) RGD PMID:25263562 NCBI chr20:45,294,876...45,387,698
Ensembl chr20:45,294,871...45,387,697
JBrowse link
G Sesn2 sestrin 2 involved_in ISO (PMID:25263562) RGD PMID:25263562 NCBI chr 5:144,702,287...144,721,241
Ensembl chr 5:144,701,530...144,721,260
JBrowse link
G Sesn3 sestrin 3 involved_in ISO (PMID:25263562) RGD PMID:25263562 NCBI chr 8:11,133,822...11,189,436
Ensembl chr 8:11,133,678...11,185,842
JBrowse link
G Sh3glb1 SH3 domain -containing GRB2-like endophilin B1 involved_in ISO
IEA
(PMID:21068542)
GO_REF:0000107
RGD
Ensembl
PMID:21068542 GO_REF:0000107 NCBI chr 2:233,750,838...233,784,817
Ensembl chr 2:233,750,838...233,784,784
JBrowse link
G Slc38a2 solute carrier family 38, member 2 IEP RGD PMID:11311116 RGD:68721 NCBI chr 7:127,851,267...127,863,482
Ensembl chr 7:127,851,267...127,863,436
JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex involved_in ISO (PMID:28199306), (PMID:28199315) RGD PMID:28199306 PMID:28199315 NCBI chr 5:131,897,250...131,943,953
Ensembl chr 5:131,897,275...131,943,904
JBrowse link
G Tfeb transcription factor EB involved_in ISO (PMID:22343943), (PMID:22576015), (PMID:22692423) RGD PMID:22343943 PMID:22576015 PMID:22692423 NCBI chr 9:13,198,890...13,254,726
Ensembl chr 9:13,198,891...13,254,714
JBrowse link
G Ucp2 uncoupling protein 2 IEP glutamine RGD PMID:18692019 RGD:7240714 NCBI chr 1:154,839,242...154,845,612
Ensembl chr 1:154,839,209...154,845,611
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in ISO UniProtKB:O70405 (MGI:5607224|PMID:21855797) RGD PMID:21855797 MGI:5607224 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
JBrowse link
G Wdr24 WD repeat domain 24 involved_in ISO (PMID:23723238) RGD PMID:23723238 NCBI chr10:14,844,089...14,848,871
Ensembl chr10:14,843,728...14,848,864
JBrowse link
G Wdr59 WD repeat domain 59 involved_in ISO (PMID:23723238) RGD PMID:23723238 NCBI chr19:39,416,432...39,483,773
Ensembl chr19:39,416,429...39,483,698
JBrowse link
cellular response to calcium ion starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A IEP RGD PMID:9878749 RGD:9999163 NCBI chr 1:96,000,053...96,003,128
Ensembl chr 1:96,000,058...96,003,171
JBrowse link
cellular response to cell-matrix adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within ISO (MGI:3712614|PMID:17286598) RGD PMID:17286598 MGI:3712614 NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672
JBrowse link
G Fscn1 fascin actin-bundling protein 1 IEP RGD PMID:7657718 RGD:2317778 NCBI chr12:11,597,042...11,610,183
Ensembl chr12:11,597,048...11,610,211
JBrowse link
G Gstp1 glutathione S-transferase pi 1 IEP RGD PMID:10793289 RGD:2317832 NCBI chr 1:201,337,762...201,340,230
Ensembl chr 1:201,321,672...201,340,226
JBrowse link
G Mmp3 matrix metallopeptidase 3 IEP RGD PMID:12963432 RGD:2325968 NCBI chr 8:4,640,397...4,653,963
Ensembl chr 8:4,640,416...4,653,961
JBrowse link
G Mmp9 matrix metallopeptidase 9 IEP
IMP
RGD PMID:20218972 PMID:12963432 RGD:2325787, RGD:2325968 NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
JBrowse link
G Skp2 S-phase kinase associated protein 2 IEP RGD PMID:11425869 RGD:2315071 NCBI chr 2:58,161,226...58,189,293
Ensembl chr 2:58,161,229...58,189,338
JBrowse link
cellular response to copper ion starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aoc1 amine oxidase, copper containing 1 involved_in ISO
IDA
(PMID:9399025) RGD PMID:9399025 PMID:9399025 RGD:8553761 NCBI chr 4:77,812,260...77,831,846
Ensembl chr 4:77,812,260...77,831,840
JBrowse link
cellular response to external biotic stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IEP RGD PMID:16353156 RGD:2316359 NCBI chr 4:25,357,467...25,529,941
Ensembl chr 4:25,158,362...25,442,709
JBrowse link
G Abcb1b ATP-binding cassette, subfamily B (MDR/TAP), member 1B IEP RGD PMID:16353156 RGD:2316359 NCBI chr 4:25,242,761...25,325,194
Ensembl chr 4:25,242,798...25,325,199
JBrowse link
G Cda cytidine deaminase IEP K-selection - confluent culture RGD PMID:16353156 RGD:2316359 NCBI chr 5:150,556,615...150,583,231
Ensembl chr 5:150,556,615...150,583,231
JBrowse link
cellular response to extracellular stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adnp activity-dependent neuroprotector homeobox IEP vasoactive intestinal peptide RGD PMID:15518891 RGD:2312774 NCBI chr 3:156,886,921...156,921,500
Ensembl chr 3:156,891,381...156,917,312
JBrowse link
G Adora2b adenosine A2B receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:65736|PMID:8157966)
Ensembl
RGD
PMID:8157966 GO_REF:0000107 MGI:65736 NCBI chr10:46,940,394...46,956,772
Ensembl chr10:46,940,384...46,956,772
JBrowse link
G Aif1 allograft inflammatory factor 1 IEP lipopolysaccharide RGD PMID:18717813 RGD:2313015 NCBI chr20:3,646,784...3,652,670
Ensembl chr20:3,646,777...3,652,668
JBrowse link
G Aldob aldolase, fructose-bisphosphate B IEP 3D hepatocyte culture RGD PMID:15770659 RGD:2313417 NCBI chr 5:63,889,045...63,902,086
Ensembl chr 5:63,889,046...63,902,116
JBrowse link
G Arhgap35 Rho GTPase activating protein 35 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:1933687|PMID:11283609)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:11283609 GO_REF:0000024 GO_REF:0000107 MGI:1933687 NCBI chr 1:77,202,436...77,319,298
Ensembl chr 1:77,202,436...77,319,298
JBrowse link
G Asgr1 asialoglycoprotein receptor 1 acts_upstream_of_or_within ISO (MGI:58018|PMID:3215517) RGD PMID:3215517 MGI:58018 NCBI chr10:54,775,727...54,779,642
Ensembl chr10:54,776,024...54,779,631
JBrowse link
G Axl Axl receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:1335904|PMID:10322635) RGD PMID:10322635 MGI:1335904 NCBI chr 1:81,265,656...81,296,278
Ensembl chr 1:81,265,088...81,296,265
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A involved_in ISO (PMID:17553787) RGD PMID:17553787 NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585
JBrowse link
G Cdkn2b cyclin-dependent kinase inhibitor 2B involved_in ISO (PMID:17553787) RGD PMID:17553787 NCBI chr 5:104,009,839...104,019,082
Ensembl chr 5:104,010,680...104,019,050
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (MGI:1096764|PMID:9294610) RGD PMID:9294610 MGI:1096764 NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036
JBrowse link
G Fosl1 FOS like 1, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (MGI:1096764|PMID:9294610) RGD PMID:9294610 MGI:1096764 NCBI chr 1:202,754,549...202,763,057
Ensembl chr 1:202,754,529...202,764,930
JBrowse link
G Gsdmd gasdermin D acts_upstream_of_or_within ISO (MGI:1335904|PMID:10322635) RGD PMID:10322635 MGI:1335904 NCBI chr 7:107,542,242...107,547,052
Ensembl chr 7:107,542,083...107,547,055
JBrowse link
G Itga6 integrin subunit alpha 6 acts_upstream_of_or_within ISO (MGI:1335904|PMID:10322635) RGD PMID:10322635 MGI:1335904 NCBI chr 3:56,604,512...56,689,428
Ensembl chr 3:56,617,268...56,689,428
JBrowse link
G Ldha lactate dehydrogenase A acts_upstream_of_or_within ISO (MGI:1335904|PMID:10322635) RGD PMID:10322635 MGI:1335904 NCBI chr 1:97,371,823...97,381,247
Ensembl chr 1:97,366,021...97,433,472
JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase IEP RGD PMID:17845203 RGD:2303708 NCBI chr 5:16,639,512...16,755,501
Ensembl chr 5:16,639,466...16,756,868
JBrowse link
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:7877627)
(MGI:84485|PMID:8961274)
Ensembl
RGD
PMID:7877627 PMID:8961274 GO_REF:0000107 MGI:84485 NCBI chr 3:41,689,847...41,707,036
Ensembl chr 3:41,689,851...41,697,877
JBrowse link
G P2rx7 purinergic receptor P2X 7 acts_upstream_of_or_within ISO MGI:2386080 (MGI:3772417|PMID:18082965) RGD PMID:18082965 MGI:3772417 NCBI chr12:33,889,709...33,934,168
Ensembl chr12:33,879,745...33,934,619
JBrowse link
G Plec plectin involved_in ISO
IEA
(MGI:1313095|PMID:9808630)
GO_REF:0000107
RGD
Ensembl
PMID:9808630 GO_REF:0000107 MGI:1313095 NCBI chr 7:107,887,764...107,949,100
Ensembl chr 7:107,887,764...107,945,467
JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C involved_in ISO UniProtKB:P05480 (MGI:3530407|PMID:15661907) RGD PMID:15661907 MGI:3530407 NCBI chr13:49,596,193...49,708,283
Ensembl chr13:49,596,193...49,708,692
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO (MGI:1335904|PMID:10322635) RGD PMID:10322635 MGI:1335904 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
JBrowse link
G Slc1a2 solute carrier family 1 member 2 acts_upstream_of_or_within ISO MGI:2449707 (MGI:3608234|PMID:16197522) RGD PMID:16197522 MGI:3608234 NCBI chr 3:89,005,129...89,126,498
Ensembl chr 3:89,005,129...89,126,498
JBrowse link
G Tle5 TLE family member 5, transcriptional modulator involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:1335904|PMID:10322635)
Ensembl
RGD
PMID:10322635 GO_REF:0000107 MGI:1335904 NCBI chr 7:8,143,357...8,150,295
Ensembl chr 7:8,143,357...8,150,113
JBrowse link
cellular response to folic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Folr1 folate receptor alpha involved_in ISO (PMID:14722620) RGD PMID:14722620 NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667
JBrowse link
G Folr2 folate receptor beta involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:156,200,044...156,218,380
Ensembl chr 1:156,200,060...156,205,724
JBrowse link
cellular response to glucose starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asns asparagine synthetase (glutamine-hydrolyzing) involved_in IEP
ISO
(PMID:10085239) RGD PMID:10085239 PMID:10085239 RGD:2315999 NCBI chr 4:35,784,995...35,803,474
Ensembl chr 4:35,785,237...35,803,423
JBrowse link
G Atf4 activating transcription factor 4 involved_in ISO (PMID:22915762) RGD PMID:22915762 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
JBrowse link
G Atg14 autophagy related 14 involved_in ISS
ISO
GO_REF:0000024
(MGI:5619439|PMID:23332761)
UniProt
RGD
PMID:23332761 GO_REF:0000024 MGI:5619439 NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:77298|PMID:7595537)
Ensembl
RGD
PMID:7595537 GO_REF:0000107 MGI:77298 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Becn1 beclin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5619439|PMID:23332761)
UniProt
RGD
PMID:23332761 GO_REF:0000024 MGI:5619439 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Bhlha15 basic helix-loop-helix family, member a15 involved_in ISS
ISO
GO_REF:0000024
(MGI:5607242|PMID:17612490)
UniProt
RGD
PMID:17612490 GO_REF:0000024 MGI:5607242 NCBI chr12:10,420,465...10,424,641
Ensembl chr12:10,420,467...10,424,713
JBrowse link
G Brsk1 BR serine/threonine kinase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:69,134,166...69,159,947
Ensembl chr 1:69,134,565...69,160,365
JBrowse link
G Brsk2 BR serine/threonine kinase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:197,035,522...197,088,624
Ensembl chr 1:197,035,633...197,088,092
JBrowse link
G Cpeb4 cytoplasmic polyadenylation element binding protein 4 involved_in IDA PMID:20937770 UniProt PMID:20937770 RGD:8553637 NCBI chr10:15,717,794...15,780,482
Ensembl chr10:15,717,794...15,780,603
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISO (PMID:22915762)
(MGI:5607215|PMID:22915762)
RGD PMID:22915762 MGI:5607215 NCBI chr 4:102,805,495...102,866,914
Ensembl chr 4:102,805,510...102,866,911
JBrowse link
G Foxo3 forkhead box O3 involved_in ISO (PMID:29445193) RGD PMID:29445193 NCBI chr20:45,669,708...45,764,606
Ensembl chr20:45,672,995...45,764,561
JBrowse link
G Gck glucokinase IMP down-regulation of the counterregulatory response to insulin-induced hypoglycemia RGD PMID:18292346 RGD:2301900 NCBI chr14:80,785,060...80,829,842
Ensembl chr14:80,785,060...80,826,995
JBrowse link
G Higd1a HIG1 hypoxia inducible domain family, member 1A acts_upstream_of_or_within ISO (MGI:3654896|PMID:16815968), (MGI:5643884|PMID:25683712) RGD PMID:16815968 PMID:25683712 MGI:3654896 MGI:5643884 NCBI chr 8:121,514,152...121,523,382
Ensembl chr 8:121,514,156...121,523,443
JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 involved_in ISO (PMID:25689357) RGD PMID:25689357 NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in ISO (PMID:10085239) RGD PMID:10085239 NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891
JBrowse link
G Impact impact RWD domain protein involved_in ISS
ISO
GO_REF:0000024
(MGI:5576818|PMID:24333428)
UniProt
RGD
PMID:24333428 GO_REF:0000024 MGI:5576818 NCBI chr18:4,108,872...4,147,571
Ensembl chr18:4,108,853...4,147,569
JBrowse link
G Itfg2 integrin alpha FG-GAP repeat containing 2 involved_in ISO (PMID:28199306) RGD PMID:28199306 NCBI chr 4:161,684,249...161,698,315
Ensembl chr 4:161,684,249...161,698,422
JBrowse link
G Kics2 KICSTOR subunit 2 involved_in ISO
IBA
(PMID:28199306)
PMID:21873635
RGD PMID:28199306 PMID:21873635 RGD:13792537 NCBI chr 7:57,284,213...57,299,070
Ensembl chr 7:57,284,192...57,297,486
JBrowse link
G Kptn kaptin (actin binding protein) involved_in ISO
IEA
(PMID:28199306)
GO_REF:0000107
RGD
Ensembl
PMID:28199306 GO_REF:0000107 NCBI chr 1:76,808,737...76,809,531 JBrowse link
G Mtmr3 myotubularin related protein 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:25578879)
Ensembl
RGD
PMID:25578879 GO_REF:0000107 NCBI chr14:79,340,523...79,460,947
Ensembl chr14:79,340,513...79,461,041
JBrowse link
G Mybbp1a MYB binding protein 1a involved_in ISO (PMID:21471221) RGD PMID:21471221 NCBI chr10:57,056,913...57,067,263
Ensembl chr10:57,056,874...57,067,255
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in ISO (MGI:5616326|PMID:14978030) RGD PMID:14978030 MGI:5616326 NCBI chr 3:60,594,239...60,621,785
Ensembl chr 3:60,594,242...60,621,737
JBrowse link
G Nim1k NIM1 serine/threonine protein kinase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:51,670,764...51,714,782
Ensembl chr 2:51,670,772...51,714,762
JBrowse link
G Nuak1 NUAK family kinase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:19,330,034...19,401,918
Ensembl chr 7:19,329,933...19,401,913
JBrowse link
G Nuak2 NUAK family kinase 2 involved_in IBA
IDA
ISO
PMID:21873635
PMID:15893879
(PMID:14575707)
RGD PMID:14575707 PMID:21873635 PMID:15893879 RGD:13792537, RGD:8553633 NCBI chr13:43,753,454...43,770,604
Ensembl chr13:43,753,832...43,770,604
JBrowse link
G Pick1 protein interacting with PRKCA 1 involved_in IMP PMID:23843614 UniProt PMID:23843614 RGD:8553949 NCBI chr 7:110,796,623...110,816,850
Ensembl chr 7:110,797,117...110,816,848
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5619439|PMID:23332761)
UniProt
RGD
PMID:23332761 GO_REF:0000024 MGI:5619439 NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
JBrowse link
G Pik3r4 phosphoinositide-3-kinase, regulatory subunit 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:5619439|PMID:23332761)
UniProt
RGD
PMID:23332761 GO_REF:0000024 MGI:5619439 NCBI chr 8:106,267,908...106,316,585
Ensembl chr 8:106,267,954...106,316,584
JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in ISO (PMID:21145489) RGD PMID:21145489 NCBI chr18:59,986,187...59,990,174
Ensembl chr18:59,986,017...59,992,429
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5285135|PMID:21258367)
UniProt
RGD
PMID:21258367 GO_REF:0000024 MGI:5285135 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5285135|PMID:21258367), (MGI:5619439|PMID:23332761)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:21258367 PMID:23332761 GO_REF:0000024 GO_REF:0000107 MGI:5285135 MGI:5619439 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
JBrowse link
G Prkag1 protein kinase AMP-activated non-catalytic subunit gamma 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:129,963,105...129,980,532
Ensembl chr 7:129,963,105...129,980,561
JBrowse link
G Prkag2 protein kinase AMP-activated non-catalytic subunit gamma 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:10,010,574...10,252,152
Ensembl chr 4:10,010,890...10,252,142
JBrowse link
G Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:76,295,715...76,304,959
Ensembl chr 9:76,295,715...76,304,959
JBrowse link
G Prkcd protein kinase C, delta IEP RGD PMID:17728702 RGD:1642520 NCBI chr16:5,769,226...5,807,214
Ensembl chr16:5,769,215...5,799,352
JBrowse link
G Rrp8 ribosomal RNA processing 8 involved_in IBA
ISO
PMID:21873635
(PMID:21471221)
RGD PMID:21471221 PMID:21873635 RGD:13792537 NCBI chr 1:160,081,092...160,088,709
Ensembl chr 1:160,084,295...160,089,331
JBrowse link
G Sesn1 sestrin 1 involved_in ISO (PMID:25263562) RGD PMID:25263562 NCBI chr20:45,294,876...45,387,698
Ensembl chr20:45,294,871...45,387,697
JBrowse link
G Sesn2 sestrin 2 involved_in ISO (PMID:25263562) RGD PMID:25263562 NCBI chr 5:144,702,287...144,721,241
Ensembl chr 5:144,701,530...144,721,260
JBrowse link
G Sesn3 sestrin 3 involved_in ISO (PMID:25263562) RGD PMID:25263562 NCBI chr 8:11,133,822...11,189,436
Ensembl chr 8:11,133,678...11,185,842
JBrowse link
G Sh3glb1 SH3 domain -containing GRB2-like endophilin B1 involved_in ISO
IEA
(PMID:21068542)
GO_REF:0000107
RGD
Ensembl
PMID:21068542 GO_REF:0000107 NCBI chr 2:233,750,838...233,784,817
Ensembl chr 2:233,750,838...233,784,784
JBrowse link
G Sik1 salt-inducible kinase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:9,949,407...9,959,036
Ensembl chr20:9,947,396...9,958,991
JBrowse link
G Sik2 salt-inducible kinase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:51,225,543...51,325,343
Ensembl chr 8:51,225,543...51,325,415
JBrowse link
G Slc2a1 solute carrier family 2 member 1 acts_upstream_of_or_within ISO (MGI:1932248|PMID:11259273) RGD PMID:11259273 MGI:1932248 NCBI chr 5:132,717,196...132,745,416
Ensembl chr 5:132,717,196...132,745,416
JBrowse link
G Szt2 SZT2 subunit of KICSTOR complex involved_in ISO (PMID:28199306), (PMID:28199315) RGD PMID:28199306 PMID:28199315 NCBI chr 5:131,897,250...131,943,953
Ensembl chr 5:131,897,275...131,943,904
JBrowse link
G Tbl2 transducin (beta)-like 2 involved_in ISO (PMID:25393282) RGD PMID:25393282 NCBI chr12:21,517,600...21,532,114
Ensembl chr12:21,520,682...21,531,896
JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
ISO (PMID:21471221)
(PMID:14744935)
RGD PMID:14744935 PMID:21471221 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Upp1 uridine phosphorylase 1 IEP RGD PMID:18457515 RGD:2317094 NCBI chr14:83,809,495...83,829,299
Ensembl chr14:83,809,960...83,829,462
JBrowse link
G Vldlr very low density lipoprotein receptor IEP RGD PMID:18262491 RGD:2324645 NCBI chr 1:224,813,539...224,850,400
Ensembl chr 1:224,814,377...224,845,920
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5607242|PMID:17612490)
UniProt
RGD
PMID:17612490 GO_REF:0000024 MGI:5607242 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO (MGI:5297619|PMID:21971051) RGD PMID:21971051 MGI:5297619 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
JBrowse link
cellular response to iron ion starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hfe homeostatic iron regulator IEP RGD PMID:16208485 RGD:1582698 NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502
JBrowse link
cellular response to L-ascorbic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eln elastin IEP RGD PMID:2859894 RGD:9585689 NCBI chr12:21,968,544...22,011,929
Ensembl chr12:21,968,544...22,011,928
JBrowse link
G Lep leptin IEP RGD PMID:20400526 RGD:5128594 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
JBrowse link
cellular response to leucine starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf4 activating transcription factor 4 involved_in ISO
IEA
(MGI:3710913|PMID:17267404)
GO_REF:0000107
RGD
Ensembl
PMID:17267404 GO_REF:0000107 MGI:3710913 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:5494763|PMID:23447528) RGD PMID:23447528 MGI:5494763 NCBI chr 3:105,356,261...105,441,630
Ensembl chr 3:105,356,261...105,441,630
JBrowse link
G Gcn1 GCN1 activator of EIF2AK4 involved_in ISO (MGI:5494763|PMID:23447528) RGD PMID:23447528 MGI:5494763 NCBI chr12:40,991,512...41,052,661
Ensembl chr12:40,991,512...41,052,555
JBrowse link
G Impact impact RWD domain protein involved_in ISS
ISO
GO_REF:0000024
(MGI:5494763|PMID:23447528)
UniProt
RGD
PMID:23447528 GO_REF:0000024 MGI:5494763 NCBI chr18:4,108,872...4,147,571
Ensembl chr18:4,108,853...4,147,569
JBrowse link
G Lars1 leucyl-tRNA synthetase 1 involved_in ISO (PMID:22424946) RGD PMID:22424946 NCBI chr18:34,201,555...34,256,003
Ensembl chr18:34,201,549...34,255,931
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO (PMID:22424946) RGD PMID:22424946 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G RragB Ras-related GTP binding B involved_in ISO (PMID:22424946) RGD PMID:22424946 NCBI chr  X:18,184,619...18,234,639
Ensembl chr  X:18,184,992...18,234,639
JBrowse link
G Rragd Ras-related GTP binding D involved_in ISO (PMID:22424946) RGD PMID:22424946 NCBI chr 5:47,373,902...47,409,369
Ensembl chr 5:47,373,463...47,409,356
JBrowse link
G Sesn1 sestrin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:45,294,876...45,387,698
Ensembl chr20:45,294,871...45,387,697
JBrowse link
G Sesn2 sestrin 2 involved_in ISO
IBA
(PMID:26449471)
PMID:21873635
RGD PMID:26449471 PMID:21873635 RGD:13792537 NCBI chr 5:144,702,287...144,721,241
Ensembl chr 5:144,701,530...144,721,260
JBrowse link
G Sesn3 sestrin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:11,133,822...11,189,436
Ensembl chr 8:11,133,678...11,185,842
JBrowse link
cellular response to magnesium starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B IEP RGD PMID:17428633 RGD:4106247 NCBI chr 4:168,580,824...169,044,110
Ensembl chr 4:168,599,546...169,042,279
JBrowse link
cellular response to mechanical stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afap1 actin filament associated protein 1 IEP mechanical cyclic stretching RGD PMID:12114187 RGD:625602 NCBI chr14:74,743,322...74,856,295
Ensembl chr14:74,743,320...74,856,263
JBrowse link
G Agt angiotensinogen IEP RGD PMID:21131638 RGD:5129192 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G Akt1 AKT serine/threonine kinase 1 IDA RGD PMID:20042609 RGD:7242068 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921
JBrowse link
G Ankrd1 ankyrin repeat domain 1 involved_in ISO (PMID:17239933) RGD PMID:17239933 NCBI chr 1:233,815,851...233,834,891
Ensembl chr 1:233,815,851...233,834,919
JBrowse link
G Aqp1 aquaporin 1 involved_in ISO
ISS
(PMID:19268465)
GO_REF:0000024
RGD
UniProt
PMID:19268465 GO_REF:0000024 NCBI chr 4:84,482,512...84,494,690
Ensembl chr 4:84,482,512...84,494,690
JBrowse link
G Arhgdia Rho GDP dissociation inhibitor alpha IMP RGD PMID:18566890 RGD:9684962 NCBI chr10:105,854,526...105,858,020
Ensembl chr10:105,854,533...105,858,023
JBrowse link
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 IDA RGD PMID:17458903 RGD:6903221 NCBI chr 2:189,020,722...189,048,826
Ensembl chr 2:189,020,722...189,048,837
JBrowse link
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 IDA
IEP
RGD PMID:17458903 PMID:16893515 RGD:6903221, RGD:1581763 NCBI chr13:84,729,597...84,754,544
Ensembl chr13:84,729,601...84,754,544
JBrowse link
G Bad BCL2-associated agonist of cell death involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr 1:204,133,502...204,142,829
Ensembl chr 1:204,131,501...204,142,823
JBrowse link
G Bag3 BAG cochaperone 3 acts_upstream_of_or_within ISO MGI:3530294 (MGI:3656163|PMID:16936253) RGD PMID:16936253 MGI:3656163 NCBI chr 1:183,103,038...183,126,862
Ensembl chr 1:183,102,871...183,126,858
JBrowse link
G Bak1 BCL2-antagonist/killer 1 involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr20:5,100,480...5,109,669
Ensembl chr20:5,100,480...5,109,264
JBrowse link
G Bcl10 BCL10, immune signaling adaptor involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr 2:234,840,880...234,850,520
Ensembl chr 2:234,840,858...234,850,523
JBrowse link
G Bmp2 bone morphogenetic protein 2 IEP RGD PMID:20877159 RGD:9068439 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
JBrowse link
G Bmp4 bone morphogenetic protein 4 IEP RGD PMID:20877159 RGD:9068439 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Bmp6 bone morphogenetic protein 6 IEP RGD PMID:23198877 RGD:7242187 NCBI chr17:26,318,121...26,469,034
Ensembl chr17:26,318,569...26,470,365
JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr 1:193,708,164...193,725,348
Ensembl chr 1:193,708,167...193,725,359
JBrowse link
G Casp1 caspase 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:19593445)
Ensembl
RGD
PMID:19593445 GO_REF:0000107 NCBI chr 8:2,587,812...2,597,403
Ensembl chr 8:2,587,831...2,597,383
JBrowse link
G Casp2 caspase 2 involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr 4:71,149,632...71,167,388
Ensembl chr 4:71,149,669...71,167,379
JBrowse link
G Casp8 caspase 8 involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr 9:60,263,863...60,312,542
Ensembl chr 9:60,264,075...60,312,542
JBrowse link
G Casp8ap2 caspase 8 associated protein 2 involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr 5:47,014,501...47,052,276
Ensembl chr 5:47,014,667...47,052,275
JBrowse link
G Cav1 caveolin 1 IDA RGD PMID:20172952 RGD:6849300 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Cd40 CD40 molecule involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr 3:153,790,372...153,805,279
Ensembl chr 3:153,790,449...153,805,534
JBrowse link
G Chek1 checkpoint kinase 1 involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr 8:36,420,565...36,443,477 JBrowse link
G Cnn2 calponin 2 acts_upstream_of_or_within ISO (PMID:16236705) RGD PMID:16236705 NCBI chr 7:9,712,505...9,719,711
Ensembl chr 7:9,712,516...9,719,656
JBrowse link
G Col1a1 collagen type I alpha 1 chain acts_upstream_of_or_within IEP
ISO
uniaxial mechanical tension
(PMID:21625049)
RGD PMID:21625049 PMID:22615126 RGD:8552682 NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624
JBrowse link
G Col2a1 collagen type II alpha 1 chain IEP cyclic compressive stress RGD PMID:19725071 RGD:8661239 NCBI chr 7:129,098,489...129,127,620
Ensembl chr 7:129,098,786...129,127,546
JBrowse link
G Cradd CASP2 and RIPK1 domain containing adaptor with death domain involved_in ISO
IBA
(PMID:19593445)
PMID:21873635
RGD PMID:19593445 PMID:21873635 RGD:13792537 NCBI chr 7:29,940,240...29,952,907
Ensembl chr 7:29,798,586...29,952,907
JBrowse link
G Ctnnb1 catenin beta 1 IDA RGD PMID:20042609 RGD:7242068 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Ctsb cathepsin B IEP cyclic tensile stress RGD PMID:18464888 RGD:2315512 NCBI chr15:37,389,636...37,410,508
Ensembl chr15:37,389,629...37,410,500
JBrowse link
G Cyba cytochrome b-245 alpha chain IEP RGD PMID:16685209 RGD:2317865 NCBI chr19:50,487,598...50,495,669
Ensembl chr19:50,487,597...50,495,721
JBrowse link
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 IEP cyclic stretching RGD PMID:19478813 RGD:4891163 NCBI chr 7:106,838,590...106,845,004
Ensembl chr 7:106,838,590...106,845,004
JBrowse link
G Dag1 dystroglycan 1 IMP RGD PMID:18556591 RGD:11541067 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
JBrowse link
G Ednra endothelin receptor type A IMP RGD PMID:18320471 RGD:4889461 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
JBrowse link
G Egfr epidermal growth factor receptor IEP mechanical stretch RGD PMID:20927110 RGD:5131524 NCBI chr14:91,176,931...91,349,722
Ensembl chr14:91,177,067...91,344,382
JBrowse link
G Egr1 early growth response 1 IEP cyclic stretch RGD PMID:16998809 RGD:5131896 NCBI chr18:26,463,333...26,465,531
Ensembl chr18:26,462,981...26,466,766
JBrowse link
G Eng endoglin IEP mechanical stretch RGD PMID:22941949 RGD:7248789 NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEP RGD PMID:24157151 RGD:13204713 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
JBrowse link
G F11r F11 receptor involved_in ISO (PMID:26985018) RGD PMID:26985018 NCBI chr13:83,873,797...83,897,388
Ensembl chr13:83,873,797...83,897,402
JBrowse link
G F2 coagulation factor II IEP RGD PMID:22915765 RGD:6893464 NCBI chr 3:77,596,196...77,609,486
Ensembl chr 3:77,596,198...77,609,486
JBrowse link
G Fadd Fas associated via death domain involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr 1:199,743,200...199,745,746
Ensembl chr 1:199,739,994...199,745,653
JBrowse link
G Fas Fas cell surface death receptor involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
JBrowse link
G Gadd45a growth arrest and DNA-damage-inducible, alpha involved_in ISO
IEA
(PMID:19593445)
GO_REF:0000107
RGD
Ensembl
PMID:19593445 GO_REF:0000107 NCBI chr 4:96,154,789...96,157,091
Ensembl chr 4:96,154,789...96,157,115
JBrowse link
G Gclc glutamate-cysteine ligase, catalytic subunit IEP RGD PMID:20054150 RGD:8547898 NCBI chr 8:78,629,899...78,668,547
Ensembl chr 8:78,630,127...78,668,544
JBrowse link
G Gja1 gap junction protein, alpha 1 IEP RGD PMID:10631100 RGD:7207855 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582
JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 IDA mechanical stretching RGD PMID:26880260 RGD:13504840 NCBI chr 1:242,357,293...242,381,535
Ensembl chr 1:242,357,306...242,380,633
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IDA RGD PMID:20042609 RGD:7242068 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Habp4 hyaluronan binding protein 4 involved_in IDA PMID:15862299 UniProt PMID:15862299 RGD:8553316 NCBI chr17:934,931...957,604
Ensembl chr17:935,654...957,565
JBrowse link
G Hdac3 histone deacetylase 3 IEP RGD PMID:19261284 RGD:9590196 NCBI chr18:29,770,637...29,789,850
Ensembl chr18:29,770,636...29,793,856
JBrowse link
G Hdac4 histone deacetylase 4 IEP RGD PMID:19261284 RGD:9590196 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164
JBrowse link
G Hdac7 histone deacetylase 7 IEP RGD PMID:19261284 RGD:9590196 NCBI chr 7:128,923,918...128,962,025
Ensembl chr 7:128,923,920...128,962,072
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEP RGD PMID:15183444 RGD:9068913 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Igf1r insulin-like growth factor 1 receptor IEP RGD PMID:21854769 RGD:10046007 NCBI chr 1:121,549,839...121,838,545
Ensembl chr 1:121,550,743...121,831,777
JBrowse link
G Igf2 insulin-like growth factor 2 IEP RGD PMID:20695079 RGD:5509947 NCBI chr 1:197,814,409...197,831,802
Ensembl chr 1:197,814,410...197,823,018
JBrowse link
G Il13 interleukin 13 IEP RGD PMID:18362439 RGD:2298568 NCBI chr10:37,790,130...37,792,687
Ensembl chr10:37,790,130...37,792,737
JBrowse link
G Il13ra2 interleukin 13 receptor subunit alpha 2 IEP RGD PMID:18362439 RGD:2298568 NCBI chr  X:111,002,590...111,074,053
Ensembl chr  X:111,002,592...111,072,381
JBrowse link
G Il18 interleukin 18 IEP RGD PMID:18320471 RGD:4889461 NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
JBrowse link
G Il1b interleukin 1 beta involved_in IEA
ISO
GO_REF:0000107
(PMID:19593445)
Ensembl
RGD
PMID:19593445 GO_REF:0000107 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
JBrowse link
G Il1rl1 interleukin 1 receptor-like 1 IEP RGD PMID:17492053 RGD:40813740 NCBI chr 9:42,661,694...42,727,266
Ensembl chr 9:42,697,192...42,727,256
JBrowse link
G Il33 interleukin 33 IEP RGD PMID:17492053 RGD:40813740 NCBI chr 1:227,701,964...227,736,374
Ensembl chr 1:227,721,435...227,736,373
JBrowse link
G Irf1 interferon regulatory factor 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:19593445)
Ensembl
RGD
PMID:19593445 GO_REF:0000107 NCBI chr10:37,917,155...37,924,166
Ensembl chr10:37,916,670...37,924,166
JBrowse link
G Itga2 integrin subunit alpha 2 IEP RGD PMID:12856576 RGD:1582308 NCBI chr 2:46,520,345...46,621,487
Ensembl chr 2:46,523,948...46,621,481
JBrowse link
G Itgb1 integrin subunit beta 1 IEP cyclic uniaxial tensile strain RGD PMID:19720043 RGD:2325327 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Itgb3 integrin subunit beta 3 IEP RGD PMID:12856576 RGD:1582308 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679
JBrowse link
G Kcnd2 potassium voltage-gated channel subfamily D member 2 IEP RGD PMID:17293496 RGD:7247436 NCBI chr 4:49,775,812...50,277,746
Ensembl chr 4:49,776,246...50,277,728
JBrowse link
G Kcnj2 potassium inwardly-rectifying channel, subfamily J, member 2 IEP RGD PMID:17293496 RGD:7247436 NCBI chr10:96,060,849...96,071,401
Ensembl chr10:96,060,821...96,071,445
JBrowse link
G Kcnj4 potassium inwardly-rectifying channel, subfamily J, member 4 IEP RGD PMID:17293496 RGD:7247436 NCBI chr 7:111,047,097...111,074,151
Ensembl chr 7:111,047,094...111,074,151
JBrowse link
G Kcnk4 potassium two pore domain channel subfamily K member 4 involved_in ISO (PMID:22282805) RGD PMID:22282805 NCBI chr 1:204,117,941...204,129,494
Ensembl chr 1:204,114,572...204,125,925
JBrowse link
G Ltbp1 latent transforming growth factor beta binding protein 1 IEP RGD PMID:9607192 RGD:10412058 NCBI chr 6:20,029,629...20,425,339
Ensembl chr 6:20,029,629...20,425,349
JBrowse link
G Ltbr lymphotoxin beta receptor involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr 4:158,108,884...158,115,339
Ensembl chr 4:158,108,886...158,121,539
JBrowse link
G Mag myelin-associated glycoprotein IEP RGD PMID:16140204 RGD:9685293 NCBI chr 1:86,148,227...86,163,726
Ensembl chr 1:86,148,228...86,163,656
JBrowse link
G Map2k4 mitogen activated protein kinase kinase 4 involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr10:50,343,227...50,447,956
Ensembl chr10:50,344,915...50,447,993
JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr 2:43,348,572...43,414,706
Ensembl chr 2:43,350,098...43,414,463
JBrowse link
G Map3k14 mitogen-activated protein kinase kinase kinase 14 involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr10:88,165,349...88,215,558
Ensembl chr10:88,165,351...88,215,523
JBrowse link
G Map3k2 mitogen activated protein kinase kinase kinase 2 involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr18:23,807,218...23,879,722
Ensembl chr18:23,807,218...23,871,433
JBrowse link
G Mapk3 mitogen activated protein kinase 3 involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in ISO
IEA
(PMID:19593445)
GO_REF:0000107
RGD
Ensembl
PMID:19593445 GO_REF:0000107 NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981
JBrowse link
G Mir101-2 microRNA 101-2 acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) RGD PMID:25959411 MGI:5705446 NCBI chr 1:226,860,371...226,860,467
Ensembl chr 1:226,860,371...226,860,467
JBrowse link
G Mir125b1 microRNA 125b-1 acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) RGD PMID:25959411 MGI:5705446 NCBI chr 8:41,952,966...41,953,052
Ensembl chr 8:41,952,966...41,953,052
JBrowse link
G Mir143 microRNA 143 acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) RGD PMID:25959411 MGI:5705446 NCBI chr18:55,101,006...55,101,110
Ensembl chr18:55,101,006...55,101,110
JBrowse link
G Mir148b microRNA 148b acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) RGD PMID:25959411 MGI:5705446 NCBI chr 7:134,421,398...134,421,494
Ensembl chr 7:134,421,398...134,421,494
JBrowse link
G Mir154 microRNA 154 acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) RGD PMID:25959411 MGI:5705446 NCBI chr 6:128,752,947...128,753,030
Ensembl chr 6:128,752,947...128,753,030
JBrowse link
G Mir194-2 microRNA 194-2 acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) RGD PMID:25959411 MGI:5705446 NCBI chr 1:203,564,761...203,564,845
Ensembl chr 1:203,564,761...203,564,845
JBrowse link
G Mir208a microRNA 208a acts_upstream_of_or_within ISO MGI:3709980 (MGI:3708230|PMID:17379774) RGD PMID:17379774 MGI:3708230 NCBI chr15:28,425,570...28,425,652 JBrowse link
G Mir20a microRNA 20a acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) RGD PMID:25959411 MGI:5705446 NCBI chr15:92,181,084...92,181,168
Ensembl chr15:92,181,084...92,181,168
JBrowse link
G Mir21 microRNA 21 IEP RGD PMID:27798620 RGD:41404703 NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
JBrowse link
G Mir223 microRNA 223 IEP RGD PMID:23046980 RGD:25824946 NCBI chr  X:61,141,887...61,141,996
Ensembl chr  X:61,141,887...61,141,996
JBrowse link
G Mir26a microRNA 26a acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) RGD PMID:25959411 MGI:5705446 NCBI chr 8:118,755,289...118,755,378
Ensembl chr 8:118,755,289...118,755,378
JBrowse link
G Mir301a microRNA 301a acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) RGD PMID:25959411 MGI:5705446 NCBI chr10:71,925,336...71,925,435
Ensembl chr10:71,925,336...71,925,435
JBrowse link
G Mir410 microRNA 410 acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) RGD PMID:25959411 MGI:5705446 NCBI chr 6:128,758,358...128,758,433
Ensembl chr 6:128,758,354...128,758,434
JBrowse link
G Mir652 microRNA 652 acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) RGD PMID:25959411 MGI:5705446 NCBI chr  X:106,343,293...106,343,373
Ensembl chr  X:106,343,293...106,343,373
JBrowse link
G Mir665 microRNA 665 acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) RGD PMID:25959411 MGI:5705446 NCBI chr 6:128,539,440...128,539,533
Ensembl chr 6:128,539,440...128,539,533
JBrowse link
G Mir760 microRNA 760 acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) RGD PMID:25959411 MGI:5705446 NCBI chr 2:210,392,616...210,392,695
Ensembl chr 2:210,392,616...210,392,695
JBrowse link
G Mir92a2 microRNA 92a-2 acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) RGD PMID:25959411 MGI:5705446 NCBI chr  X:132,421,942...132,422,033
Ensembl chr  X:132,421,942...132,422,033
JBrowse link
G Mkx mohawk homeobox IMP RGD PMID:27370800 RGD:40924660 NCBI chr17:55,077,073...55,156,877
Ensembl chr17:55,077,540...55,156,124
JBrowse link
G Mmp7 matrix metallopeptidase 7 IEP RGD PMID:20054150 RGD:8547898 NCBI chr 8:4,848,186...4,855,908
Ensembl chr 8:4,848,186...4,855,902
JBrowse link
G Mtpn myotrophin IEP RGD PMID:12031792 RGD:1581046 NCBI chr 4:64,159,273...64,186,686
Ensembl chr 4:64,157,641...64,186,724
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415
JBrowse link
G Myh9 myosin, heavy chain 9 IEP RGD PMID:8888698 RGD:11533927 NCBI chr 7:109,343,718...109,424,457
Ensembl chr 7:109,343,706...109,424,457
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in ISO
IEA
(PMID:19593445)
GO_REF:0000107
RGD
Ensembl
PMID:19593445 GO_REF:0000107 NCBI chr 2:224,016,214...224,132,135
Ensembl chr 2:224,016,214...224,110,404
JBrowse link
G Nos1 nitric oxide synthase 1 IMP RGD PMID:23619128 RGD:7257608 NCBI chr12:38,615,111...38,795,492
Ensembl chr12:38,626,714...38,710,945
JBrowse link
G Nos3 nitric oxide synthase 3 IMP RGD PMID:19673940 RGD:8693631 NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166
JBrowse link
G Nppa natriuretic peptide A IEP RGD PMID:23617620 RGD:7297055 NCBI chr 5:158,429,042...158,430,351
Ensembl chr 5:158,429,042...158,430,351
JBrowse link
G Nppb natriuretic peptide B IEP RGD PMID:21812548 PMID:23617620 RGD:5685655, RGD:7297055 NCBI chr 5:158,416,813...158,418,175
Ensembl chr 5:158,416,866...158,418,168
JBrowse link
G Pax2 paired box 2 acts_upstream_of_or_within ISO (PMID:17164400) RGD PMID:17164400 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
JBrowse link
G Pde2a phosphodiesterase 2A involved_in ISS
ISO
GO_REF:0000024
(MGI:5294515|PMID:21571906)
UniProt
RGD
PMID:21571906 GO_REF:0000024 MGI:5294515 NCBI chr 1:155,823,590...155,915,434
Ensembl chr 1:155,813,180...155,915,434
JBrowse link
G Pdgfb platelet derived growth factor subunit B IEP RGD PMID:7653578 RGD:10449502 NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984
JBrowse link
G Piezo1 piezo-type mechanosensitive ion channel component 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:50,544,580...50,606,812
Ensembl chr19:50,544,582...50,606,501
JBrowse link
G Piezo2 piezo-type mechanosensitive ion channel component 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:56,468,449...56,844,984
Ensembl chr18:56,469,680...56,844,216
JBrowse link
G Plec plectin involved_in ISO
IEA
MGI:3721885 (MGI:5790023|PMID:26519478)
GO_REF:0000107
RGD
Ensembl
PMID:26519478 GO_REF:0000107 MGI:5790023 NCBI chr 7:107,887,764...107,949,100
Ensembl chr 7:107,887,764...107,945,467
JBrowse link
G Ptger4 prostaglandin E receptor 4 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
(PMID:14665434)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:14665434 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IEP RGD PMID:21051526 RGD:5135055 NCBI chr13:62,164,080...62,169,770
Ensembl chr13:62,163,932...62,172,188
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 IPI RGD PMID:18757826 RGD:12743581 NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925
JBrowse link
G Rac1 Rac family small GTPase 1 IDA RGD PMID:12105187 RGD:1299247 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in ISO (MGI:5789047|PMID:27269051) RGD PMID:27269051 MGI:5789047 NCBI chr17:40,323,867...40,547,482
Ensembl chr17:40,323,867...40,548,092
JBrowse link
G Scx scleraxis bHLH transcription factor acts_upstream_of_or_within ISO (PMID:21625049) RGD PMID:21625049 NCBI chr 7:108,176,608...108,178,626
Ensembl chr 7:108,176,608...108,178,626
JBrowse link
G Serpine1 serpin family E member 1 IEP biaxial cyclic stretch RGD PMID:20054150 RGD:8547898 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
JBrowse link
G Sftpa1 surfactant protein A1 IEP RGD PMID:12600831 RGD:4143475 NCBI chr16:17,008,180...17,011,686
Ensembl chr16:17,008,180...17,011,685
JBrowse link
G Sftpb surfactant protein B IEP RGD PMID:12600831 RGD:4143475 NCBI chr 4:104,359,303...104,368,439
Ensembl chr 4:104,359,396...104,368,436
JBrowse link
G Sftpc surfactant protein C IEP RGD PMID:12600831 RGD:4143475 NCBI chr15:45,596,565...45,599,615
Ensembl chr15:45,596,574...45,610,777
JBrowse link
G Slc2a1 solute carrier family 2 member 1 IEP RGD PMID:19918242 RGD:12879501 NCBI chr 5:132,717,196...132,745,416
Ensembl chr 5:132,717,196...132,745,416
JBrowse link
G Slc38a2 solute carrier family 38, member 2 IEP RGD PMID:15288886 RGD:9999216 NCBI chr 7:127,851,267...127,863,482
Ensembl chr 7:127,851,267...127,863,436
JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISS
ISO
GO_REF:0000024
(MGI:5285125|PMID:21512138)
UniProt
RGD
PMID:21512138 GO_REF:0000024 MGI:5285125 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Tgfb1 transforming growth factor, beta 1 IEP RGD PMID:24120154 RGD:11073676 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
G Tlr3 toll-like receptor 3 involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr16:46,821,980...46,837,900
Ensembl chr16:46,822,039...46,836,545
JBrowse link
G Tlr4 toll-like receptor 4 involved_in IEP
IEA
ISO
GO_REF:0000107
(PMID:19593445)
Ensembl
RGD
PMID:19593445 PMID:20202224 GO_REF:0000107, RGD:4144075 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
JBrowse link
G Tlr5 toll-like receptor 5 involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr13:94,634,778...94,658,992
Ensembl chr13:94,634,801...94,657,738
JBrowse link
G Tlr7 toll-like receptor 7 involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr  X:27,027,380...27,054,309
Ensembl chr  X:27,027,425...27,054,754
JBrowse link
G Tlr8 toll-like receptor 8 involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr  X:27,091,780...27,116,092
Ensembl chr  X:27,091,778...27,116,549
JBrowse link
G Tmem150c transmembrane protein 150C involved_in ISS
ISO
GO_REF:0000024
(MGI:5829325|PMID:27321926)
UniProt
RGD
PMID:27321926 GO_REF:0000024 MGI:5829325 NCBI chr14:9,454,999...9,525,300
Ensembl chr14:9,508,515...9,525,298
JBrowse link
G Tnfrsf10b TNF receptor superfamily member 10b involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr15:44,839,818...44,867,582 JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A involved_in IEA
ISO
GO_REF:0000107
(PMID:19593445)
Ensembl
RGD
PMID:19593445 GO_REF:0000107 NCBI chr 4:158,150,815...158,163,592
Ensembl chr 4:158,150,820...158,163,591
JBrowse link
G Tnfrsf8 TNF receptor superfamily member 8 involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr 5:157,123,183...157,168,421
Ensembl chr 5:157,123,185...157,168,421
JBrowse link
G Tnfsf14 TNF superfamily member 14 involved_in ISO (PMID:19593445) RGD PMID:19593445 NCBI chr 9:2,069,075...2,073,128
Ensembl chr 9:2,069,104...2,073,216
JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) RGD PMID:25959411 MGI:5705446 NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294
JBrowse link
cellular response to menadione term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dcps decapping enzyme, scavenger involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:16140270)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:16140270 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:33,468,669...33,524,407 JBrowse link
G Ndor1 NADPH dependent diflavin oxidoreductase 1 involved_in ISO (PMID:16140270) RGD PMID:16140270 NCBI chr 3:8,062,629...8,070,873
Ensembl chr 3:8,062,630...8,070,860
JBrowse link
cellular response to methionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase IEP RGD PMID:1201245 RGD:6893692 NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822
JBrowse link
cellular response to nitrogen starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07048308.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07072668.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr19:55,052,756...55,053,109 JBrowse link
G Atg5 autophagy related 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Atg7 autophagy related 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Becn1 beclin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Becn2 beclin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:87,843,528...87,892,343
Ensembl chr13:87,844,531...87,845,787
JBrowse link
G Gabarap GABA type A receptor-associated protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:54,714,834...54,717,769
Ensembl chr10:54,714,198...54,717,765
JBrowse link
G Gabarapl1 GABA type A receptor associated protein like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:162,980,309...162,989,452
Ensembl chr 4:162,980,249...162,989,450
JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:39,910,572...39,921,408
Ensembl chr19:39,910,534...39,924,628
JBrowse link
G LOC100359937 GABA(A) receptor-associated protein-like 2-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:89,246,175...89,247,132 JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:143,783,024...143,784,670
Ensembl chr 3:143,783,024...143,784,670
JBrowse link
G Map1lc3b microtubule-associated protein 1 light chain 3 beta involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690
JBrowse link
G Map1lc3b2 microtubule-associated protein 1 light chain 3 beta 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,993,893...70,994,586
Ensembl chr16:70,994,128...70,994,606
JBrowse link
G Nprl2 NPR2-like, GATOR1 complex subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:108,215,823...108,218,996
Ensembl chr 8:108,215,814...108,218,996
JBrowse link
cellular response to nutrient term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat2 acetyl-CoA acetyltransferase 2 IEP N-acetylcysteine RGD PMID:12563020 RGD:1598705 NCBI chr 1:47,695,833...47,713,879
Ensembl chr 1:47,695,788...47,752,821
JBrowse link
G Ccne1 cyclin E1 IEP RGD PMID:17979132 RGD:2289272 NCBI chr 1:90,781,947...90,791,188
Ensembl chr 1:90,781,949...90,791,101
JBrowse link
G Cdkn2b cyclin-dependent kinase inhibitor 2B involved_in IEA
ISO
GO_REF:0000107
(PMID:17597576)
Ensembl
RGD
PMID:17597576 GO_REF:0000107 NCBI chr 5:104,009,839...104,019,082
Ensembl chr 5:104,010,680...104,019,050
JBrowse link
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 IEP potassium RGD PMID:16876110 RGD:4891413 NCBI chr 7:106,838,590...106,845,004
Ensembl chr 7:106,838,590...106,845,004
JBrowse link
G Dbi diazepam binding inhibitor, acyl-CoA binding protein IEP RGD PMID:15825833 RGD:2316268 NCBI chr13:31,241,466...31,249,853
Ensembl chr13:31,206,988...31,268,693
JBrowse link
G Hmox1 heme oxygenase 1 IEP RGD PMID:15531134 RGD:1582714 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Lpl lipoprotein lipase involved_in ISO (MGI:6282942|PMID:21986524) RGD PMID:21986524 MGI:6282942 NCBI chr16:20,830,055...20,853,855
Ensembl chr16:20,829,465...20,855,249
JBrowse link
G Pdk2 pyruvate dehydrogenase kinase 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5428826|PMID:22360721)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22360721 GO_REF:0000024 GO_REF:0000107 MGI:5428826 NCBI chr10:79,972,550...79,987,074
Ensembl chr10:79,972,556...79,987,085
JBrowse link
G Prdm4 PR/SET domain 4 IEP fetal calf serum RGD PMID:10485890 RGD:633619 NCBI chr 7:17,953,832...17,980,489
Ensembl chr 7:17,954,019...17,980,489
JBrowse link
G Scd4 stearoyl-coenzyme A desaturase 4 involved_in ISO (MGI:2673743|PMID:12815040) RGD PMID:12815040 MGI:2673743 NCBI chr 1:243,203,433...243,216,007
Ensembl chr 1:243,203,881...243,215,148
JBrowse link
G Tnks tankyrase IEP RGD PMID:25876076 RGD:13628743 NCBI chr16:57,223,174...57,370,740
Ensembl chr16:57,225,094...57,366,260
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (MGI:4442277|PMID:20348926) RGD PMID:20348926 MGI:4442277 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
cellular response to nutrient levels term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd68 Cd68 molecule involved_in ISO (MGI:6274946|PMID:16157452) RGD PMID:16157452 MGI:6274946 NCBI chr10:54,381,814...54,383,693
Ensembl chr10:54,381,815...54,383,697
JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma, 1 involved_in ISO (PMID:18426977) RGD PMID:18426977 NCBI chr11:80,221,919...80,241,958
Ensembl chr11:80,221,919...80,241,941
JBrowse link
G Fam107a family with sequence similarity 107, member A involved_in ISS
ISO
GO_REF:0000024
(MGI:6162291|PMID:21969592)
UniProt
RGD
PMID:21969592 GO_REF:0000024 MGI:6162291 NCBI chr15:16,608,362...16,630,398
Ensembl chr15:16,607,205...16,630,396
JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP RGD PMID:20643106 RGD:4145376 NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438
JBrowse link
G Il6 interleukin 6 IEP RGD PMID:23079940 RGD:11062063 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
JBrowse link
G Kcnb1 potassium voltage-gated channel subfamily B member 1 involved_in IDA PMID:19077057 UniProt PMID:19077057 RGD:10047372 NCBI chr 3:155,820,255...155,913,383
Ensembl chr 3:155,822,963...155,916,194
JBrowse link
G Lcn2 lipocalin 2 IEP serum deprivation RGD PMID:17356516 RGD:2303047 NCBI chr 3:15,680,688...15,684,033
Ensembl chr 3:15,680,687...15,684,095
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISS
ISO
GO_REF:0000024
(MGI:5285135|PMID:21258367)
UniProt
RGD
PMID:21258367 GO_REF:0000024 MGI:5285135 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5285135|PMID:21258367)
UniProt
RGD
PMID:21258367 GO_REF:0000024 MGI:5285135 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5285135|PMID:21258367)
UniProt
RGD
PMID:21258367 GO_REF:0000024 MGI:5285135 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
JBrowse link
G Rptor regulatory associated protein of MTOR, complex 1 involved_in ISO (PMID:12150925) RGD PMID:12150925 NCBI chr10:104,878,487...105,176,986
Ensembl chr10:104,878,487...105,176,983
JBrowse link
G Txn2 thioredoxin 2 IEP Choline-deprived diet. RGD PMID:18578693 RGD:2306156 NCBI chr 7:109,496,772...109,510,378
Ensembl chr 7:109,496,761...109,510,359
JBrowse link
G Ucn2 urocortin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:109,637,624...109,639,173
Ensembl chr 8:109,638,285...109,639,172
JBrowse link
G Ucn3 urocortin 3 involved_in IEP
IBA
High-fat diet
PMID:21873635
RGD
GO_Central
PMID:17360501 PMID:21873635 RGD:2306172, RGD:13792537 NCBI chr17:66,309,952...66,315,571
Ensembl chr17:66,309,371...66,315,990
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in ISO (MGI:5285135|PMID:21258367) RGD PMID:21258367 MGI:5285135 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
JBrowse link
cellular response to oxygen-glucose deprivation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aifm1 apoptosis inducing factor, mitochondria associated 1 IEP RGD PMID:14526224 RGD:10047409 NCBI chr  X:127,650,223...127,689,356
Ensembl chr  X:127,650,226...127,689,256
JBrowse link
G Aqp3 aquaporin 3 (Gill blood group) involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5551666|PMID:24462679)
Ensembl
RGD
PMID:24462679 GO_REF:0000107 MGI:5551666 NCBI chr 5:56,239,200...56,244,718
Ensembl chr 5:56,239,201...56,244,720
JBrowse link
G Atf4 activating transcription factor 4 IEP RGD PMID:20444431 RGD:13464322 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
JBrowse link
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 IEP RGD PMID:23421680 RGD:13514095 NCBI chr 7:129,784,799...129,797,074
Ensembl chr 7:129,783,674...129,797,074
JBrowse link
G Cbl Cbl proto-oncogene IEP RGD PMID:24229686 RGD:11038824 NCBI chr 8:44,487,824...44,571,620
Ensembl chr 8:44,489,410...44,571,176
JBrowse link
G Dicer1 dicer 1 ribonuclease III IEP RGD PMID:26294080 RGD:11553310 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Dnm1l dynamin 1-like IEP RGD PMID:23658809 RGD:12738215 NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482
JBrowse link
G Ireb2 iron responsive element binding protein 2 IDA RGD PMID:16135072 RGD:12904046 NCBI chr 8:55,228,080...55,311,613
Ensembl chr 8:55,228,085...55,311,611
JBrowse link
G Lcn2 lipocalin 2 IEP RGD PMID:24916903 RGD:126790489 NCBI chr 3:15,680,688...15,684,033
Ensembl chr 3:15,680,687...15,684,095
JBrowse link
G Mfn1 mitofusin 1 IEP RGD PMID:23658809 RGD:12738215 NCBI chr 2:115,313,380...115,359,651
Ensembl chr 2:115,313,401...115,359,640
JBrowse link
G Mfn2 mitofusin 2 IEP RGD PMID:23658809 RGD:12738215 NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
JBrowse link
G Mir107 microRNA 107 IEP RGD PMID:26294080 RGD:11553310 NCBI chr 1:232,337,767...232,337,853
Ensembl chr 1:232,337,767...232,337,853
JBrowse link
G Mir874 microRNA 874 acts_upstream_of_or_within ISO (MGI:5551666|PMID:24462679) RGD PMID:24462679 MGI:5551666 NCBI chr17:6,620,649...6,620,724
Ensembl chr17:6,620,649...6,620,724
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase IEP RGD PMID:28528966 RGD:13781879 NCBI chr 6:49,425,316...49,462,109
Ensembl chr 6:49,424,332...49,462,100
JBrowse link
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A IEP RGD PMID:21525936 RGD:10054236 NCBI chr 1:96,000,053...96,003,128
Ensembl chr 1:96,000,058...96,003,171
JBrowse link
G Tsc1 TSC complex subunit 1 involved_in IMP PMID:23435171 ParkinsonsUK-UCL PMID:23435171 RGD:10448950 NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
JBrowse link
cellular response to phosphate starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase acts_upstream_of_or_within ISO (MGI:5510279|PMID:23863468) RGD PMID:23863468 MGI:5510279 NCBI chr11:82,568,052...82,587,642
Ensembl chr11:82,568,025...82,587,642
JBrowse link
G Xpr1 xenotropic and polytropic retrovirus receptor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:67,441,205...67,585,950
Ensembl chr13:67,446,380...67,585,946
JBrowse link
cellular response to potassium ion starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp11b2 cytochrome P450, family 11, subfamily b, polypeptide 2 IEP RGD PMID:20685870 RGD:4891144 NCBI chr 7:106,838,590...106,845,004
Ensembl chr 7:106,838,590...106,845,004
JBrowse link
G Hrk harakiri, BCL2 interacting protein IMP RGD PMID:17428807 RGD:2290488 NCBI chr12:38,387,484...38,409,652 JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit IMP RGD PMID:17428807 RGD:2290488 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 acts_upstream_of_or_within ISO (MGI:3851650|PMID:19458124) RGD PMID:19458124 MGI:3851650 NCBI chr 3:161,930,256...161,936,205
Ensembl chr 3:161,930,256...161,936,191
JBrowse link
G Slc38a3 solute carrier family 38, member 3 acts_upstream_of_or_within ISO (MGI:3851650|PMID:19458124) RGD PMID:19458124 MGI:3851650 NCBI chr 8:108,323,889...108,339,959
Ensembl chr 8:108,323,894...108,339,988
JBrowse link
cellular response to starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07029605.1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024
G Akr1c3 aldo-keto reductase family 1, member C3 involved_in ISO (PMID:18641923) RGD PMID:18641923 NCBI chr17:66,110,970...66,127,867
Ensembl chr17:66,110,963...66,127,873
JBrowse link
G Alb albumin involved_in ISO
ISS
IEA
(PMID:16245148)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:16245148 GO_REF:0000024 GO_REF:0000107 NCBI chr14:17,607,397...17,622,814
Ensembl chr14:17,607,381...17,622,836
JBrowse link
G Ambra1 autophagy and beclin 1 regulator 1 IEP RGD PMID:25117440 RGD:11552604 NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
JBrowse link
G Atg14 autophagy related 14 involved_in ISO
IBA
(PMID:23878393)
PMID:21873635
RGD PMID:23878393 PMID:21873635 RGD:13792537 NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
JBrowse link
G Atg4b autophagy related 4B, cysteine peptidase involved_in ISO (MGI:5630037|PMID:25578879) RGD PMID:25578879 MGI:5630037 NCBI chr 9:94,282,417...94,314,109
Ensembl chr 9:94,282,509...94,314,103
JBrowse link
G Atg5 autophagy related 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5494529|PMID:22496425)
Ensembl
RGD
PMID:22496425 GO_REF:0000107 MGI:5494529 NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Atg7 autophagy related 7 involved_in
acts_upstream_of_or_within
ISO
ISS
(PMID:20543840)
(MGI:5494529|PMID:22496425)
GO_REF:0000024
RGD
UniProt
PMID:20543840 PMID:22496425 GO_REF:0000024 MGI:5494529 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Bmf Bcl2 modifying factor involved_in ISO (MGI:5490676|PMID:23629966) RGD PMID:23629966 MGI:5490676 NCBI chr 3:105,499,534...105,520,159
Ensembl chr 3:105,499,538...105,520,145
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in ISO (PMID:15657086) RGD PMID:15657086 NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809
JBrowse link
G Cadps2 calcium dependent secretion activator 2 acts_upstream_of_or_within ISO (MGI:5468191|PMID:23260145) RGD PMID:23260145 MGI:5468191 NCBI chr 4:51,780,415...52,309,641
Ensembl chr 4:51,781,053...52,309,829
JBrowse link
G Cartpt CART prepropeptide involved_in IDA
ISO
IBA
PMID:9590691
(MGI:1203479|PMID:9590691)
PMID:15680948
PMID:21873635
RGD PMID:9590691 PMID:9590691 PMID:15680948 PMID:21873635 MGI:1203479, RGD:8554847, RGD:8553315, RGD:13792537 NCBI chr 2:31,255,098...31,257,452
Ensembl chr 2:31,255,098...31,290,713
JBrowse link
G Cav1 caveolin 1 involved_in ISO (PMID:15657086) RGD PMID:15657086 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Clec16a C-type lectin domain containing 16A involved_in ISO (PMID:28223137) RGD PMID:28223137 NCBI chr10:4,927,804...5,123,749
Ensembl chr10:4,928,030...5,123,578
JBrowse link
G Ctsl cathepsin L IEP serum and potassium deprivation RGD PMID:16176344 RGD:2315590 NCBI chr17:764,370...770,533
Ensembl chr17:764,309...770,548
JBrowse link
G Dnajc15 DnaJ heat shock protein family (Hsp40) member C15 acts_upstream_of_or_within ISO MGI:4329547 (MGI:5529421|PMID:23530063) RGD PMID:23530063 MGI:5529421 NCBI chr15:53,182,060...53,249,675
Ensembl chr15:53,184,855...53,249,675
JBrowse link
G Dsc2 desmocollin 2 acts_upstream_of_or_within ISO (MGI:5468191|PMID:23260145) RGD PMID:23260145 MGI:5468191 NCBI chr18:11,450,392...11,482,476
Ensembl chr18:11,450,390...11,482,392
JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 acts_upstream_of_or_within ISO (PMID:23918802) RGD PMID:23918802 NCBI chr20:3,919,623...3,936,751
Ensembl chr20:3,919,624...3,941,547
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 acts_upstream_of_or_within ISO (MGI:3589702|PMID:15937339) RGD PMID:15937339 MGI:3589702 NCBI chr 3:105,356,261...105,441,630
Ensembl chr 3:105,356,261...105,441,630
JBrowse link
G Elapor1 endosome-lysosome associated apoptosis and autophagy regulator 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:21072319)
Ensembl
RGD
PMID:21072319 GO_REF:0000107 NCBI chr 2:196,089,199...196,169,055
Ensembl chr 2:196,091,646...196,168,716
JBrowse link
G Fads1 fatty acid desaturase 1 involved_in ISO (PMID:10601301) RGD PMID:10601301 NCBI chr 1:206,827,724...206,842,734
Ensembl chr 1:206,827,765...206,842,734
JBrowse link
G Fbxo22 F-box protein 22 acts_upstream_of_or_within ISO (MGI:3840749|PMID:19319192) RGD PMID:19319192 MGI:3840749 NCBI chr 8:55,579,906...55,595,981
Ensembl chr 8:55,579,891...55,596,148
JBrowse link
G Flcn folliculin involved_in ISS
ISO
GO_REF:0000024
(PMID:24095279), (PMID:31672913)
UniProt
RGD
PMID:24095279 PMID:31672913 GO_REF:0000024 NCBI chr10:44,588,621...44,607,808
Ensembl chr10:44,588,624...44,607,769
JBrowse link
G Fnip1 folliculin interacting protein 1 acts_upstream_of_or_within ISO MGI:5437714 (MGI:5436190|PMID:22608497) RGD PMID:22608497 MGI:5436190 NCBI chr10:38,567,728...38,650,824 JBrowse link
G Foxa3 forkhead box A3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2178218 (MGI:2153289|PMID:11546810)
Ensembl
RGD
PMID:11546810 GO_REF:0000107 MGI:2153289 NCBI chr 1:78,662,067...78,672,321
Ensembl chr 1:78,662,431...78,672,155
JBrowse link
G Foxo1 forkhead box O1 involved_in ISS
ISO
GO_REF:0000024
(PMID:20543840)
UniProt
RGD
PMID:20543840 GO_REF:0000024 NCBI chr 2:136,312,168...136,390,603
Ensembl chr 2:136,312,168...136,387,790
JBrowse link
G Gas2l1 growth arrest-specific 2 like 1 involved_in ISO (MGI:3052497|PMID:12584248) RGD PMID:12584248 MGI:3052497 NCBI chr14:79,951,702...79,961,830
Ensembl chr14:79,950,555...79,961,438
JBrowse link
G Gas6 growth arrest specific 6 acts_upstream_of_or_within ISO (MGI:1861137|PMID:8336730) RGD PMID:8336730 MGI:1861137 NCBI chr16:76,045,430...76,075,904
Ensembl chr16:76,045,426...76,075,904
JBrowse link
G Gba glucosylceramidase beta involved_in ISO (MGI:5501380|PMID:23707074) RGD PMID:23707074 MGI:5501380 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
JBrowse link
G Gcgr glucagon receptor acts_upstream_of_or_within ISO (MGI:5474727|PMID:23209793) RGD PMID:23209793 MGI:5474727 NCBI chr10:105,808,474...105,816,641
Ensembl chr10:105,808,473...105,816,640
JBrowse link
G Glul glutamate-ammonia ligase acts_upstream_of_or_within ISO (MGI:5468191|PMID:23260145) RGD PMID:23260145 MGI:5468191 NCBI chr13:65,969,064...66,035,121
Ensembl chr13:66,025,630...66,035,108
JBrowse link
G Inhbb inhibin subunit beta B involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
(PMID:19491194)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:19491194 GO_REF:0000024 GO_REF:0000107 NCBI chr13:30,530,860...30,536,566
Ensembl chr13:30,530,860...30,537,832
JBrowse link
G Klf10 Kruppel-like factor 10 involved_in ISS
ISO
GO_REF:0000024
(MGI:4438787|PMID:20070857)
UniProt
RGD
PMID:20070857 GO_REF:0000024 MGI:4438787 NCBI chr 7:69,467,658...69,473,726
Ensembl chr 7:69,465,619...69,473,994
JBrowse link
G Krt20 keratin 20 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3759335|PMID:16608857)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:16608857 GO_REF:0000024 GO_REF:0000107 MGI:3759335 NCBI chr10:84,384,802...84,394,107
Ensembl chr10:84,384,802...84,394,107
JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5805578|PMID:27628032)
GO_REF:0000024
RGD
UniProt
PMID:27628032 PMID:21873635 GO_REF:0000024 MGI:5805578, RGD:13792537 NCBI chr  X:117,173,097...117,222,090
Ensembl chr  X:117,057,606...117,260,522
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:24211199) RGD PMID:24211199 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha involved_in ISO (PMID:28223137) RGD PMID:28223137 NCBI chr 3:143,783,024...143,784,670
Ensembl chr 3:143,783,024...143,784,670
JBrowse link
G Map1lc3b microtubule-associated protein 1 light chain 3 beta involved_in ISO (PMID:28223137) RGD PMID:28223137 NCBI chr19:49,665,795...49,673,655
Ensembl chr19:49,665,791...49,677,690
JBrowse link
G Mars1 methionyl-tRNA synthetase 1 involved_in ISO (PMID:10791971) RGD PMID:10791971 NCBI chr 7:63,121,142...63,138,550
Ensembl chr 7:63,121,142...63,138,495
JBrowse link
G Max MYC associated factor X IEP serum deprivation RGD PMID:10446908 RGD:2316822 NCBI chr 6:95,636,857...95,662,204
Ensembl chr 6:95,636,858...95,662,137
JBrowse link
G Mfsd2a major facilitator superfamily domain containing 2A acts_upstream_of_or_within ISO (MGI:5474727|PMID:23209793) RGD PMID:23209793 MGI:5474727 NCBI chr 5:135,225,801...135,240,744
Ensembl chr 5:135,225,816...135,240,690
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO
ISS
(PMID:22343943), (PMID:22576015), (PMID:22692423), (PMID:28223137)
GO_REF:0000024
RGD
UniProt
PMID:22343943 PMID:22576015 PMID:22692423 PMID:28223137 GO_REF:0000024 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Myh13 myosin heavy chain 13 acts_upstream_of_or_within ISO (MGI:3840749|PMID:19319192) RGD PMID:19319192 MGI:3840749 NCBI chr10:52,012,779...52,068,960
Ensembl chr10:52,009,425...52,068,951
JBrowse link
G Myod1 myogenic differentiation 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3840749|PMID:19319192)
Ensembl
RGD
PMID:19319192 GO_REF:0000107 MGI:3840749 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
JBrowse link
G Nupr2 nuclear protein 2, transcriptional regulator involved_in ISO (PMID:25899918) RGD PMID:25899918 NCBI chr12:26,800,123...26,803,228
Ensembl chr12:26,799,800...26,803,304
JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in IDA
ISO
PMID:16407292
(MGI:3700436|PMID:16407292)
RGD PMID:16407292 PMID:16407292 MGI:3700436, RGD:8553473 NCBI chr 5:121,211,278...121,233,688
Ensembl chr 5:121,211,278...121,233,688
JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 involved_in ISO
IEA
ISS
(PMID:14966024)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:14966024 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:33,591,796...33,601,798
Ensembl chr 4:33,589,799...33,601,850
JBrowse link
G Pik3c2a phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha acts_upstream_of_or_within ISO MGI:2685045 (MGI:5565574|PMID:24098492) RGD PMID:24098492 MGI:5565574 NCBI chr 1:170,577,942...170,684,353
Ensembl chr 1:170,577,942...170,683,472
JBrowse link
G Pik3c2b phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta acts_upstream_of_or_within ISO MGI:1203729 (MGI:5565574|PMID:24098492) RGD PMID:24098492 MGI:5565574 NCBI chr13:44,494,673...44,555,663
Ensembl chr13:44,495,050...44,555,612
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 acts_upstream_of_or_within ISO (MGI:5565574|PMID:24098492) RGD PMID:24098492 MGI:5565574 NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in ISO (MGI:5474727|PMID:23209793) RGD PMID:23209793 MGI:5474727 NCBI chr 7:116,832,405...116,900,878
Ensembl chr 7:116,832,756...116,895,346
JBrowse link
G Ppm1d protein phosphatase, Mg2+/Mn2+ dependent, 1D IEP RGD PMID:23520533 RGD:8693590 NCBI chr10:70,172,603...70,208,607
Ensembl chr10:70,172,603...70,208,607
JBrowse link
G Ralb RAS like proto-oncogene B involved_in IEA
ISO
GO_REF:0000107
(PMID:24056301)
Ensembl
RGD
PMID:24056301 GO_REF:0000107 NCBI chr13:30,588,036...30,624,199
Ensembl chr13:30,588,033...30,624,202
JBrowse link
G Ripor1 RHO family interacting cell polarization regulator 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:27807006)
UniProt
Ensembl
RGD
PMID:27807006 GO_REF:0000024 GO_REF:0000107 NCBI chr19:33,477,750...33,506,424
Ensembl chr19:33,477,793...33,506,420
JBrowse link
G Rnase4 ribonuclease A family member 4 acts_upstream_of_or_within ISO (MGI:5468191|PMID:23260145) RGD PMID:23260145 MGI:5468191 NCBI chr15:24,312,765...24,330,116
Ensembl chr15:24,312,464...24,330,117
JBrowse link
G Rptor regulatory associated protein of MTOR, complex 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:104,878,487...105,176,986
Ensembl chr10:104,878,487...105,176,983
JBrowse link
G Rraga Ras-related GTP binding A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:101,113,341...101,114,936
Ensembl chr 5:101,112,859...101,114,510
JBrowse link
G RragB Ras-related GTP binding B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:18,184,619...18,234,639
Ensembl chr  X:18,184,992...18,234,639
JBrowse link
G Rragc Ras-related GTP binding C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:136,148,239...136,167,773
Ensembl chr 5:136,148,276...136,167,767
JBrowse link
G Rragd Ras-related GTP binding D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:47,373,902...47,409,369
Ensembl chr 5:47,373,463...47,409,356
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:11932307), (PMID:9724099)
Ensembl
RGD
PMID:9724099 PMID:11932307 GO_REF:0000107 NCBI chr16:68,575,763...68,613,905
Ensembl chr16:68,575,763...68,614,286
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (MGI:3045940|PMID:15175761) RGD PMID:15175761 MGI:3045940 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Sphk1 sphingosine kinase 1 IEP RGD PMID:16959847 RGD:2311370 NCBI chr10:101,758,567...101,764,240
Ensembl chr10:101,758,711...101,764,240
JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP serum-free culture RGD PMID:9729333 RGD:1600064 NCBI chr 1:33,686,069...33,720,468
Ensembl chr 1:33,686,391...33,720,461
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in IDA
ISO
PMID:16407292
(MGI:3700436|PMID:16407292)
RGD PMID:16407292 PMID:16407292 MGI:3700436, RGD:8553473 NCBI chr10:45,007,637...45,029,650
Ensembl chr10:45,007,637...45,029,650
JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:25339898)
Ensembl
RGD
PMID:25339898 GO_REF:0000107 NCBI chr 7:113,663,202...113,720,850
Ensembl chr 7:113,663,202...113,720,848
JBrowse link
G Stk24 serine/threonine kinase 24 involved_in ISO
IEA
ISS
(PMID:27807006)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:27807006 GO_REF:0000024 GO_REF:0000107 NCBI chr15:98,363,707...98,458,940
Ensembl chr15:98,365,791...98,460,553
JBrowse link
G Stk26 serine/threonine kinase 26 involved_in ISO (PMID:27807006) RGD PMID:27807006 NCBI chr  X:130,310,855...130,375,677
Ensembl chr  X:130,310,885...130,374,291
JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO MGI:5430317 (MGI:5468191|PMID:23260145) RGD PMID:23260145 MGI:5468191 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967
JBrowse link
G Tfeb transcription factor EB involved_in ISO (PMID:21617040), (PMID:22343943), (PMID:22576015), (PMID:22692423) RGD PMID:21617040 PMID:22343943 PMID:22576015 PMID:22692423 NCBI chr 9:13,198,890...13,254,726
Ensembl chr 9:13,198,891...13,254,714
JBrowse link
G Tnrc6a trinucleotide repeat containing adaptor 6A acts_upstream_of_or_within ISO (MGI:3510094|PMID:15494374) RGD PMID:15494374 MGI:3510094 NCBI chr 1:177,561,898...177,715,669
Ensembl chr 1:177,646,030...177,715,660
JBrowse link
G Usp33 ubiquitin specific peptidase 33 involved_in ISO (PMID:24056301) RGD PMID:24056301 NCBI chr 2:241,283,209...241,328,479
Ensembl chr 2:241,292,985...241,328,479
JBrowse link
G Vps41 VPS41 subunit of HOPS complex involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:46,063,124...46,227,582
Ensembl chr17:46,063,124...46,227,791
JBrowse link
G Wdr45 WD repeat domain 45 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:28561066)
UniProt
Ensembl
RGD
PMID:28561066 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:14,776,280...14,782,197
Ensembl chr  X:14,776,293...14,782,202
JBrowse link
G Wdr45b WD repeat domain 45B involved_in ISO (PMID:28561066) RGD PMID:28561066 NCBI chr10:106,597,558...106,629,488
Ensembl chr10:106,599,364...106,629,441
JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in ISO (PMID:28561066) RGD PMID:28561066 NCBI chr10:94,542,946...94,580,174
Ensembl chr10:94,542,946...94,579,846
JBrowse link
G Wipi2 WD repeat domain, phosphoinositide interacting 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:28561066)
UniProt
RGD
PMID:28561066 GO_REF:0000024 NCBI chr12:11,911,369...11,939,799
Ensembl chr12:11,911,337...11,939,794
JBrowse link
G Wnt2b Wnt family member 2B acts_upstream_of_or_within ISO (MGI:5468191|PMID:23260145) RGD PMID:23260145 MGI:5468191 NCBI chr 2:192,454,226...192,468,599
Ensembl chr 2:192,453,824...192,470,308
JBrowse link
G Wnt4 Wnt family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5468191|PMID:23260145)
Ensembl
RGD
PMID:23260145 GO_REF:0000107 MGI:5468191 NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO (MGI:5468191|PMID:23260145) RGD PMID:23260145 MGI:5468191 NCBI chr10:88,635,330...88,657,035
Ensembl chr10:88,635,331...88,657,035
JBrowse link
G Wrn WRN RecQ like helicase acts_upstream_of_or_within ISO (PMID:11420665) RGD PMID:11420665 NCBI chr16:58,763,517...58,898,604
Ensembl chr16:58,763,504...58,895,450
JBrowse link
G Zfyve1 zinc finger FYVE-type containing 1 involved_in ISO (PMID:25578879) RGD PMID:25578879 NCBI chr 6:103,184,938...103,234,111
Ensembl chr 6:103,184,938...103,234,039
JBrowse link
cellular response to vitamin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting helicase 1 IEP RGD PMID:16771696 RGD:2326085 NCBI chr10:70,907,266...71,031,502
Ensembl chr10:70,907,371...71,030,324
JBrowse link
cellular response to vitamin A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ltc4s leukotriene C4 synthase IEP RGD PMID:12767051 RGD:724432 NCBI chr10:34,560,476...34,562,790
Ensembl chr10:34,560,360...34,562,651
JBrowse link
cellular response to vitamin B1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mdm2 MDM2 proto-oncogene IEP RGD PMID:15656374 RGD:2317394 NCBI chr 7:53,290,660...53,315,205
Ensembl chr 7:53,290,664...53,314,915
JBrowse link
cellular response to vitamin B3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sirt1 sirtuin 1 IEP RGD PMID:23555824 RGD:10047117 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
cellular response to vitamin D term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 IEP RGD PMID:11108265 RGD:9681746 NCBI chr11:24,932,227...24,941,068
Ensembl chr11:24,931,761...24,941,103
JBrowse link
G Atp2b1 ATPase plasma membrane Ca2+ transporting 1 IEP RGD PMID:11277270 RGD:2317730 NCBI chr 7:33,735,595...33,845,226
Ensembl chr 7:33,735,871...33,843,295
JBrowse link
G Bglap bone gamma-carboxyglutamate protein IEP RGD PMID:6607920 PMID:3257212 RGD:2316174, RGD:6483560 NCBI chr 2:173,838,518...173,839,495
Ensembl chr 2:173,838,518...173,839,495
JBrowse link
G Casr calcium-sensing receptor IEP 1,25-dihydroxycholecalciferol (calcitriol) RGD PMID:21940515 RGD:7205697 NCBI chr11:64,235,251...64,304,811
Ensembl chr11:64,235,251...64,304,811
JBrowse link
G Fes FES proto-oncogene, tyrosine kinase involved_in ISO (PMID:28389358) RGD PMID:28389358 NCBI chr 1:134,337,698...134,346,934
Ensembl chr 1:134,337,698...134,346,934
JBrowse link
G Fgf23 fibroblast growth factor 23 IEP RGD PMID:23263654 RGD:10044209 NCBI chr 4:159,914,393...159,922,073
Ensembl chr 4:159,914,272...159,923,821
JBrowse link
G Fzd1 frizzled class receptor 1 IEP RGD PMID:1334084 RGD:61590 NCBI chr 4:29,310,303...29,314,701 JBrowse link
G Fzd2 frizzled class receptor 2 IEP RGD PMID:1334084 RGD:61590 NCBI chr10:87,561,866...87,563,776
Ensembl chr10:87,561,326...87,565,334
JBrowse link
G Gdap1 ganglioside-induced differentiation-associated-protein 1 IEP RGD PMID:25449168 RGD:12738378 NCBI chr 5:1,932,613...1,951,691
Ensembl chr 5:1,932,613...2,030,061
JBrowse link
G Il15 interleukin 15 IEP RGD PMID:15637289 RGD:2311387 NCBI chr19:25,640,013...25,706,818
Ensembl chr19:25,640,251...25,706,820
JBrowse link
G Itgb1 integrin subunit beta 1 IEP calcitriol RGD PMID:20304064 RGD:2325261 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Ltbp1 latent transforming growth factor beta binding protein 1 IEP RGD PMID:10025676 RGD:10412059 NCBI chr 6:20,029,629...20,425,339
Ensembl chr 6:20,029,629...20,425,349
JBrowse link
G Mmp1 matrix metallopeptidase 1 IEP RGD PMID:22064970 RGD:7207281 NCBI chr 8:4,658,588...4,679,099
Ensembl chr 8:4,658,588...4,679,097
JBrowse link
G Nos2 nitric oxide synthase 2 IEP RGD PMID:18534083 RGD:4891908 NCBI chr10:63,815,308...63,851,208
Ensembl chr10:63,815,308...63,851,210
JBrowse link
G Pdia3 protein disulfide isomerase family A, member 3 IDA RGD PMID:15862831 RGD:9999173 NCBI chr 3:108,388,189...108,412,013
Ensembl chr 3:108,388,245...108,413,236
JBrowse link
G Penk proenkephalin IEP RGD PMID:8584038 RGD:10003035 NCBI chr 5:17,183,799...17,189,160
Ensembl chr 5:17,183,806...17,189,129
JBrowse link
G Phex phosphate regulating endopeptidase homolog, X-linked IEP RGD PMID:15337762 RGD:11556251 NCBI chr  X:37,607,553...37,856,183
Ensembl chr  X:37,610,760...37,854,469
JBrowse link
G Ptn pleiotrophin IEP RGD PMID:21153232 RGD:9831436 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in ISO
IEA
(PMID:16149051)
GO_REF:0000107
RGD
Ensembl
PMID:16149051 GO_REF:0000107 NCBI chr16:68,575,763...68,613,905
Ensembl chr16:68,575,763...68,614,286
JBrowse link
G Sult2a1 sulfotransferase family 2A member 1 IDA RGD PMID:14978251 RGD:2317006 NCBI chr 1:75,451,178...75,508,142 JBrowse link
G Tnc tenascin C IEP RGD PMID:10502285 RGD:4889620 NCBI chr 5:77,375,851...77,460,712
Ensembl chr 5:77,375,851...77,460,624
JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 IEP RGD PMID:29331667 RGD:127284861 NCBI chr 9:12,763,819...12,779,285
Ensembl chr 9:12,763,819...12,779,203
JBrowse link
G Vdr vitamin D receptor IEP RGD PMID:9753201 RGD:8158092 NCBI chr 7:128,987,981...129,037,677
Ensembl chr 7:128,987,981...129,037,677
JBrowse link
cellular response to vitamin E term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col1a1 collagen type I alpha 1 chain IEP RGD PMID:23722449 RGD:8552711 NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624
JBrowse link
G Col2a1 collagen type II alpha 1 chain IEP RGD PMID:23722449 RGD:8552711 NCBI chr 7:129,098,489...129,127,620
Ensembl chr 7:129,098,786...129,127,546
JBrowse link
G Pawr pro-apoptotic WT1 regulator IEP RGD PMID:10428045 RGD:9835341 NCBI chr 7:43,645,028...43,725,033
Ensembl chr 7:43,645,084...43,725,028
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma IEP RGD PMID:11752099 RGD:8553036 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
cellular response to vitamin K term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl5 C-C motif chemokine ligand 5 IEP menadione (K3) RGD PMID:19291322 RGD:4889997 NCBI chr10:68,322,826...68,327,365
Ensembl chr10:68,322,829...68,327,377
JBrowse link
G Gas6 growth arrest specific 6 involved_in ISO
ISS
(PMID:16359517)
GO_REF:0000024
RGD
UniProt
PMID:16359517 GO_REF:0000024 NCBI chr16:76,045,430...76,075,904
Ensembl chr16:76,045,426...76,075,904
JBrowse link
G Postn periostin involved_in ISO (PMID:18450759)
(MGI:3804342|PMID:18450759)
RGD PMID:18450759 MGI:3804342 NCBI chr 2:138,527,714...138,559,098
Ensembl chr 2:138,527,696...138,559,099
JBrowse link
cellular response to water deprivation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp2 aquaporin 2 acts_upstream_of_or_within
involved_in
IDA
ISO
IEA
(MGI:1328377|PMID:10191086)
GO_REF:0000107
RGD
Ensembl
PMID:10191086 PMID:15196935 GO_REF:0000107 MGI:1328377, RGD:2313141 NCBI chr 7:130,711,433...130,716,468
Ensembl chr 7:130,711,413...130,716,468
JBrowse link
G Avpr1a arginine vasopressin receptor 1A IEP RGD PMID:11796498 RGD:70387 NCBI chr 7:58,114,306...58,118,230
Ensembl chr 7:58,114,284...58,122,215
JBrowse link
G Sipa1 signal-induced proliferation-associated 1 IDA RGD PMID:15196935 RGD:2313141 NCBI chr 1:202,938,532...202,950,672
Ensembl chr 1:202,938,580...202,950,591
JBrowse link
cellular response to zinc ion starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc39a4 solute carrier family 39 member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3522410|PMID:15358787)
Ensembl
RGD
PMID:15358787 GO_REF:0000107 MGI:3522410 NCBI chr 7:108,333,380...108,337,553
Ensembl chr 7:108,333,381...108,337,553
JBrowse link
G Slc39a5 solute carrier family 39 member 5 acts_upstream_of_or_within ISO (MGI:3522410|PMID:15358787) RGD PMID:15358787 MGI:3522410 NCBI chr 7:822,873...830,865
Ensembl chr 7:824,818...830,242
JBrowse link
DNA protection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase involved_in ISO (PMID:24534463) RGD PMID:24534463 NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764
JBrowse link
G Dctpp1 dCTP pyrophosphatase 1 involved_in ISO
IBA
ISS
(PMID:24467396)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:24467396 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:181,877,440...181,880,833
Ensembl chr 1:181,877,437...181,880,839
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor IMP RGD PMID:31644904 RGD:126925983 NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587
JBrowse link
G Nudt1 nudix hydrolase 1 involved_in ISO
ISS
(PMID:10608900)
GO_REF:0000024
RGD
UniProt
PMID:10608900 GO_REF:0000024 NCBI chr12:14,302,514...14,309,559
Ensembl chr12:14,302,694...14,305,826
JBrowse link
G Nudt15 nudix hydrolase 15 NOT|involved_in ISO (PMID:26238318)
(PMID:26878724)
RGD PMID:26238318 PMID:26878724 NCBI chr15:48,707,776...48,747,363
Ensembl chr15:48,709,700...48,747,363
JBrowse link
negative regulation of transcription from RNA polymerase II promoter by glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 involved_in ISO (MGI:5142372|PMID:11875061) RGD PMID:11875061 MGI:5142372 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
JBrowse link
negative regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kank2 KN motif and ankyrin repeat domains 2 involved_in IBA
ISO
PMID:21873635
(PMID:24671081)
RGD PMID:24671081 PMID:21873635 RGD:13792537 NCBI chr 8:20,311,676...20,341,107
Ensembl chr 8:20,311,676...20,340,900
JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:19502595) RGD PMID:19502595 NCBI chr11:86,183,800...86,186,109
Ensembl chr11:86,181,909...86,186,200
JBrowse link
positive regulation of transcription by glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srf serum response factor IMP RGD PMID:20655308 RGD:5131625 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
JBrowse link
positive regulation of transcription from RNA polymerase II promoter by galactose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncoa1 nuclear receptor coactivator 1 involved_in ISO (PMID:10207113)
(MGI:5297786|PMID:16723356)
RGD PMID:10207113 PMID:16723356 MGI:5297786 NCBI chr 6:27,232,609...27,507,992
Ensembl chr 6:27,232,611...27,475,664
JBrowse link
positive regulation of transcription from RNA polymerase II promoter by glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 involved_in ISO (MGI:5142372|PMID:11875061) RGD PMID:11875061 MGI:5142372 NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
JBrowse link
G Usf1 upstream transcription factor 1 involved_in ISO (PMID:7852331)
(MGI:1330677|PMID:9890958)
RGD PMID:7852331 PMID:9890958 MGI:1330677 NCBI chr13:83,845,230...83,854,875
Ensembl chr13:83,822,035...83,854,885
JBrowse link
G Usf2 upstream transcription factor 2, c-fos interacting involved_in ISO
IEA
(PMID:7852331)
GO_REF:0000107
(MGI:1330677|PMID:9890958)
RGD
Ensembl
PMID:7852331 PMID:9890958 GO_REF:0000107 MGI:1330677 NCBI chr 1:86,174,703...86,185,942
Ensembl chr 1:86,174,703...86,185,617
JBrowse link
positive regulation of translational initiation in response to starvation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:2149467|PMID:10655230), (MGI:3589053|PMID:16121183)
UniProt
RGD
PMID:10655230 PMID:16121183 GO_REF:0000024 MGI:2149467 MGI:3589053 NCBI chr 3:105,356,261...105,441,630
Ensembl chr 3:105,356,261...105,441,630
JBrowse link
G Impact impact RWD domain protein involved_in ISS
ISO
GO_REF:0000024
(MGI:5494763|PMID:23447528)
UniProt
RGD
PMID:23447528 GO_REF:0000024 MGI:5494763 NCBI chr18:4,108,872...4,147,571
Ensembl chr18:4,108,853...4,147,569
JBrowse link
positive regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 involved_in ISO (PMID:16549446) RGD PMID:16549446 NCBI chr 7:62,869,340...62,876,242
Ensembl chr 7:62,871,297...62,876,241
JBrowse link
G Mn1 MN1 proto-oncogene, transcriptional regulator involved_in ISO (PMID:15890672) RGD PMID:15890672 NCBI chr12:45,184,060...45,220,102
Ensembl chr12:45,183,085...45,221,651
JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:11514567), (PMID:9632709) RGD PMID:9632709 PMID:11514567 NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536
JBrowse link
regulation of cell growth by extracellular stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif26a kinesin family member 26A involved_in ISO (MGI:4410392|PMID:19914172) RGD PMID:19914172 MGI:4410392 NCBI chr 6:131,214,839...131,250,874
Ensembl chr 6:131,214,861...131,250,320
JBrowse link
G Myocd myocardin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:2136697|PMID:11439182)
Ensembl
RGD
PMID:11439182 GO_REF:0000107 MGI:2136697 NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
JBrowse link
regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO MGI:1861125 (MGI:3655015|PMID:16324150) RGD PMID:16324150 MGI:3655015 NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299
JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:14985122) RGD PMID:14985122 NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536
JBrowse link
G Trim24 tripartite motif-containing 24 acts_upstream_of_or_within ISO MGI:3772051 (MGI:3776949|PMID:18287084) RGD PMID:18287084 MGI:3776949 NCBI chr 4:66,664,864...66,717,244
Ensembl chr 4:66,566,686...66,717,241
JBrowse link
vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pim1 Pim-1 proto-oncogene, serine/threonine kinase involved_in ISO (PMID:22720752) RGD PMID:22720752 NCBI chr20:7,554,921...7,559,174
Ensembl chr20:7,554,921...7,559,174
JBrowse link
G Vdr vitamin D receptor involved_in ISO
IEA
(PMID:16549446), (PMID:28698609)
GO_REF:0000107
RGD
Ensembl
PMID:16549446 PMID:28698609 GO_REF:0000107 NCBI chr 7:128,987,981...129,037,677
Ensembl chr 7:128,987,981...129,037,677
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19391
    response to stimulus 10325
      response to external stimulus 3174
        cellular response to external stimulus 427
          cellular response to external biotic stimulus 3
          cellular response to extracellular stimulus + 302
          cellular response to mechanical stimulus 134
paths to the root