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ONTOLOGY REPORT - ANNOTATIONS

Term:cellular response to light stimulus
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Accession:GO:0071482 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light.


show annotations for term's descendants           Sort by:
cellular response to light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRB1 crumbs cell polarity complex component 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3696487|PMID:17234588) Ensembl
Ensembl
MGI		 PMID:17234588 GO_REF:0000107 MGI:3696487 NCBI chr10:20,137,246...20,332,539
Ensembl chr10:20,137,451...20,332,414 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha ISO RGD PMID:17475674 RGD:9068879 NCBI chr 1:190,625,436...190,673,926
Ensembl chr 1:190,625,244...190,674,845 		JBrowse link
G KCNE1 potassium voltage-gated channel subfamily E regulatory subunit 1 ISO RGD PMID:24202060 RGD:12910722 NCBI chr13:198,051,281...198,059,444
Ensembl chr13:198,051,282...198,059,296 		JBrowse link
G LOC494564 medium-wave-sensitive opsin involved_in IBA (PMID:21873635) GO_Central
GO_Central		 PMID:21873635 NCBI chr  X:124,816,014...124,828,225 JBrowse link
G OPN1SW opsin 1, short wave sensitive involved_in IBA (PMID:21873635) GO_Central
GO_Central		 PMID:21873635 NCBI chr18:19,836,453...19,839,425
Ensembl chr18:19,836,453...19,839,425 		JBrowse link
G OPN4 opsin 4 involved_in IBA (PMID:21873635) GO_Central
GO_Central		 PMID:21873635 NCBI chr14:87,645,563...87,660,820
Ensembl chr14:87,647,238...87,658,815 		JBrowse link
G OPN5 opsin 5 involved_in IBA
IEA		 (PMID:21873635) GO_Central
GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr 7:42,476,125...42,507,181
Ensembl chr 7:42,476,125...42,527,121 		JBrowse link
G RGR retinal G protein coupled receptor involved_in IBA (PMID:21873635) GO_Central
GO_Central		 PMID:21873635 NCBI chr14:85,485,210...85,496,393
Ensembl chr14:85,485,171...85,496,381 		JBrowse link
G RHO rhodopsin acts_upstream_of_or_within
involved_in		 ISO
IBA
IEA		 (MGI:4849309|PMID:21052544)
(PMID:21873635)		 MGI
GO_Central
Ensembl
GO_Central		 PMID:21052544 PMID:21873635 GO_REF:0000107 MGI:4849309 NCBI chr13:68,908,578...68,913,651
Ensembl chr13:68,908,578...68,913,651 		JBrowse link
G RP1 RP1 axonemal microtubule associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:4849309|PMID:21052544) Ensembl
Ensembl
MGI		 PMID:21052544 GO_REF:0000107 MGI:4849309 NCBI chr 4:76,724,604...76,730,264
Ensembl chr 4:76,724,604...76,734,610 		JBrowse link
G RPGR retinitis pigmentosa GTPase regulator acts_upstream_of_or_within ISO (MGI:1354839|PMID:10725384) MGI PMID:10725384 MGI:1354839 NCBI chr  X:34,238,961...34,522,814
Ensembl chr  X:34,228,124...34,296,589 		JBrowse link
G RRH retinal pigment epithelium-derived rhodopsin homolog involved_in IBA (PMID:21873635) GO_Central
GO_Central		 PMID:21873635 NCBI chr 8:112,382,208...112,399,622
Ensembl chr 8:112,382,189...112,399,176 		JBrowse link
G TRPM1 transient receptor potential cation channel subfamily M member 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:4420740|PMID:19966281)
(MGI:4849309|PMID:21052544)		 MGI
Ensembl		 PMID:19966281 PMID:21052544 GO_REF:0000107 MGI:4420740 MGI:4849309 NCBI chr 1:143,718,295...143,856,968
Ensembl chr 1:143,709,864...143,855,984 		JBrowse link
adaptation of rhodopsin mediated signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RDH11 retinol dehydrogenase 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3584215|PMID:15790565) Ensembl
Ensembl
MGI		 PMID:15790565 GO_REF:0000107 MGI:3584215 NCBI chr 7:91,415,041...91,452,530
Ensembl chr 7:91,415,042...91,452,405 		JBrowse link
G RS1 retinoschisin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3055638|PMID:15326152) Ensembl
Ensembl
MGI		 PMID:15326152 GO_REF:0000107 MGI:3055638 NCBI chr  X:15,080,972...15,099,426
Ensembl chr  X:15,085,050...15,109,243 		JBrowse link
cellular response to high light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT2 AKT serine/threonine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3695811|PMID:17202487) Ensembl
Ensembl
MGI		 PMID:17202487 GO_REF:0000107 MGI:3695811 NCBI chr 6:48,555,785...48,620,472
Ensembl chr 6:48,555,795...48,587,919 		JBrowse link
G SLC24A4 solute carrier family 24 member 4 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 7:113,836,207...114,014,952
Ensembl chr 7:113,836,230...114,014,949 		JBrowse link
cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQP1 aquaporin 1 (Colton blood group) involved_in ISS
IEA		 UniProt
Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr18:42,063,482...42,076,741
Ensembl chr18:42,063,485...42,076,746 		JBrowse link
G ATR ATR serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:83,175,515...83,289,986
Ensembl chr13:83,174,824...83,289,989 		JBrowse link
G AURKB aurora kinase B involved_in ISS
IEA		 UniProt
UniProt
Ensembl
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr12:53,410,833...53,426,165
Ensembl chr12:53,410,177...53,423,225 		JBrowse link
G BAK1 BCL2 antagonist/killer 1 involved_in ISO (PMID:15901672)
(MGI:3689797|PMID:15901672)		 UniProt PMID:15901672 MGI:3689797 NCBI chr 7:29,808,849...29,815,345 JBrowse link
G BAX BCL2 associated X, apoptosis regulator acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3042308|PMID:14963330) MGI
Ensembl		 PMID:14963330 GO_REF:0000107 MGI:3042308 NCBI chr 6:54,222,341...54,228,150
Ensembl chr 6:54,222,336...54,228,140 		JBrowse link
G BMF Bcl2 modifying factor involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 1:131,178,021...131,199,668
Ensembl chr 1:131,178,315...131,200,393 		JBrowse link
G CASP9 caspase 9 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 6:74,707,597...74,730,033
Ensembl chr 6:74,706,516...74,730,007 		JBrowse link
G CDC25A cell division cycle 25A involved_in IEA Ensembl
Ensembl		 GO_REF:0000107
G COPS9 COP9 signalosome subunit 9 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr15:139,260,471...139,264,252
Ensembl chr15:139,260,478...139,264,211 		JBrowse link
G CREBBP CREB binding protein involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 3:38,388,366...38,530,243
Ensembl chr 3:38,388,547...38,530,224 		JBrowse link
G CUL4A cullin 4A involved_in ISO (PMID:22118460)
(MGI:6867266|PMID:22118460)		 ComplexPortal PMID:22118460 MGI:6867266 NCBI chr11:78,557,030...78,588,964
Ensembl chr11:78,557,013...78,589,193 		JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in ISO (PMID:22118460)
(MGI:6867266|PMID:22118460)		 ComplexPortal PMID:22118460 MGI:6867266 NCBI chr 2:10,171,554...10,201,602
Ensembl chr 2:10,171,502...10,201,598 		JBrowse link
G DDB2 damage specific DNA binding protein 2 involved_in ISO (PMID:22118460)
(MGI:6867266|PMID:22118460)		 ComplexPortal PMID:22118460 MGI:6867266 NCBI chr 2:15,342,614...15,370,623
Ensembl chr 2:15,337,743...15,383,120 		JBrowse link
G DDIAS DNA damage induced apoptosis suppressor acts_upstream_of_or_within ISO (MGI:3718924|PMID:17515607) MGI PMID:17515607 MGI:3718924 NCBI chr 9:17,077,884...17,097,597
Ensembl chr 9:17,077,884...17,097,588 		JBrowse link
G DHX36 DEAH-box helicase 36 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr13:94,298,790...94,350,333
Ensembl chr13:94,298,794...94,350,308 		JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:5700311|PMID:12176355) UniProt PMID:12176355 MGI:5700311 NCBI chr 1:131,244,818...131,355,240
Ensembl chr 1:131,245,466...131,355,226 		JBrowse link
G EIF2S1 eukaryotic translation initiation factor 2 subunit alpha involved_in IEA
ISS		 Ensembl
UniProt
Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:91,085,025...91,109,835
Ensembl chr 7:91,085,335...91,109,827 		JBrowse link
G EP300 E1A binding protein p300 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 5:7,311,165...7,394,515
Ensembl chr 5:7,311,171...7,393,760 		JBrowse link
G ERCC4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:29,266,234...29,306,109
Ensembl chr 3:29,269,989...29,306,151 		JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 involved_in ISO (PMID:17873522) UniProt PMID:17873522 NCBI chr 8:76,482,027...76,699,354
Ensembl chr 8:76,482,844...76,699,348 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:130,201,705...130,341,627
Ensembl chr 1:130,201,718...130,342,838 		JBrowse link
G KDM1A lysine demethylase 1A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24217620) MGI
Ensembl
Ensembl		 PMID:24217620 GO_REF:0000107 NCBI chr 6:80,903,407...80,971,875
Ensembl chr 6:80,903,424...80,971,873 		JBrowse link
G MAPK13 mitogen-activated protein kinase 13 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 7:31,880,643...31,889,586
Ensembl chr 7:31,880,638...31,889,455 		JBrowse link
G MAPK9 mitogen-activated protein kinase 9 ISO RGD PMID:8875991 RGD:2304246 NCBI chr 2:78,338,466...78,399,108
Ensembl chr 2:78,338,376...78,399,100 		JBrowse link
G METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 7:77,661,945...77,679,459
Ensembl chr 7:77,662,058...77,695,934 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 4:12,455,141...12,460,360
Ensembl chr 4:12,455,122...12,461,078 		JBrowse link
G N4BP1 NEDD4 binding protein 1 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 6:36,122,189...36,177,965
Ensembl chr 6:36,122,035...36,174,504 		JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:115,941,945...116,069,884
Ensembl chr 1:115,941,940...116,070,305 		JBrowse link
G NFATC4 nuclear factor of activated T cells 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3709926|PMID:17242187) Ensembl
Ensembl
MGI		 PMID:17242187 GO_REF:0000107 MGI:3709926 NCBI chr 7:74,918,982...74,929,688
Ensembl chr 7:74,918,984...74,929,600 		JBrowse link
G NOC2L NOC2 like nucleolar associated transcriptional repressor involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 6:63,307,703...63,320,799
Ensembl chr 6:63,307,695...63,335,201 		JBrowse link
G NPM1 nucleophosmin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:52,767,263...52,781,862
Ensembl chr16:52,765,298...52,781,771 		JBrowse link
G NSMCE3 NSE3 homolog, SMC5-SMC6 complex component involved_in ISO (PMID:27427983) UniProt PMID:27427983 NCBI chr 1:144,469,617...144,474,026 JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr10:14,203,157...14,241,164
Ensembl chr10:14,203,160...14,241,196 		JBrowse link
G PBK PDZ binding kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:5293269|PMID:21715333) Ensembl
Ensembl
MGI		 PMID:21715333 GO_REF:0000107 MGI:5293269 NCBI chr14:11,543,657...11,577,286
Ensembl chr14:11,543,603...11,566,702 		JBrowse link
G PCNA proliferating cell nuclear antigen involved_in ISO
IEA		 RGD
Ensembl		 PMID:8905661 GO_REF:0000107 RGD:10448977 NCBI chr17:14,137,746...14,142,584
Ensembl chr17:14,136,886...14,142,744 		JBrowse link
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3709926|PMID:17242187) Ensembl
Ensembl
MGI		 PMID:17242187 GO_REF:0000107 MGI:3709926 NCBI chr16:46,434,757...46,523,626
Ensembl chr16:46,511,521...46,523,609 		JBrowse link
G POLD1 DNA polymerase delta 1, catalytic subunit involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 6:55,247,799...55,272,087
Ensembl chr 6:55,247,880...55,272,085 		JBrowse link
G POLK DNA polymerase kappa involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:84,555,648...84,619,490
Ensembl chr 2:84,538,056...84,619,485 		JBrowse link
G PPP1R15A protein phosphatase 1 regulatory subunit 15A ISO RGD PMID:9811446 RGD:9999409 NCBI chr 6:54,172,038...54,175,461
Ensembl chr 6:54,172,050...54,175,463 		JBrowse link
G PRKCD protein kinase C delta involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr13:35,290,835...35,323,245
Ensembl chr13:35,290,610...35,323,356 		JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:22306367 RGD:5688265 NCBI chr 9:127,850,164...127,858,866
Ensembl chr 9:127,850,015...127,858,884 		JBrowse link
G PTN pleiotrophin ISO RGD PMID:17925408 RGD:10044023 NCBI chr18:12,219,708...12,309,045
Ensembl chr18:12,219,787...12,309,044 		JBrowse link
G PTPRK protein tyrosine phosphatase receptor type K involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 1:34,693,363...35,258,699
Ensembl chr 1:34,693,368...35,258,699 		JBrowse link
G RBX1 ring-box 1 involved_in ISO (PMID:22118460)
(MGI:6867266|PMID:22118460)		 ComplexPortal PMID:22118460 MGI:6867266 NCBI chr 5:7,500,492...7,515,388
Ensembl chr 5:7,500,490...7,515,370 		JBrowse link
G RHBDD1 rhomboid domain containing 1 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr15:128,346,315...128,499,151
Ensembl chr15:128,346,373...128,469,213 		JBrowse link
G RHNO1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 5:67,239,907...67,246,150
Ensembl chr 5:67,239,202...67,246,124 		JBrowse link
G RNF168 ring finger protein 168 acts_upstream_of_or_within ISO (MGI:5562615|PMID:24217620) MGI PMID:24217620 MGI:5562615 NCBI chr13:133,625,534...133,659,253 JBrowse link
G RPL26 ribosomal protein L26 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:53,548,313...53,553,453
Ensembl chr12:53,548,321...53,553,455 		JBrowse link
G RUVBL2 RuvB like AAA ATPase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:54,250,494...54,263,492
Ensembl chr 6:54,250,515...54,266,893 		JBrowse link
G SDE2 SDE2 telomere maintenance homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:13,879,482...13,897,847
Ensembl chr10:13,876,386...13,897,862 		JBrowse link
G SMPD1 sphingomyelin phosphodiesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:3,324,091...3,328,493
Ensembl chr 9:3,324,442...3,328,457 		JBrowse link
G TAF1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:24289924) ParkinsonsUK-UCL PMID:24289924 NCBI chr  X:57,382,211...57,466,700
Ensembl chr  X:57,382,354...57,466,697 		JBrowse link
G TMEM161A transmembrane protein 161A involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 2:58,728,738...58,744,939
Ensembl chr 2:58,728,813...58,744,937 		JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3042308|PMID:14963330) MGI
Ensembl		 PMID:14963330 GO_REF:0000107 MGI:3042308 NCBI chr12:52,939,643...52,953,786
Ensembl chr12:52,939,644...52,953,818 		JBrowse link
G TP53INP1 tumor protein p53 inducible nuclear protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:2153600|PMID:11557757) Ensembl
Ensembl
MGI		 PMID:11557757 GO_REF:0000107 MGI:2153600 NCBI chr 4:41,747,654...41,766,688
Ensembl chr 4:41,747,654...41,766,685 		JBrowse link
G TREX1 three prime repair exonuclease 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5014018|PMID:20511593) MGI
Ensembl		 PMID:20511593 GO_REF:0000107 MGI:5014018 NCBI chr13:31,177,604...31,180,764
Ensembl chr13:31,179,291...31,180,747 		JBrowse link
G TRIAP1 TP53 regulated inhibitor of apoptosis 1 involved_in ISO (PMID:15735003) BHF-UCL PMID:15735003 NCBI chr14:40,411,957...40,415,500 JBrowse link
G USP28 ubiquitin specific peptidase 28 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:41,417,560...41,481,044
Ensembl chr 9:41,417,564...41,480,994 		JBrowse link
G USP47 ubiquitin specific peptidase 47 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 2:47,449,162...47,583,893
Ensembl chr 2:47,449,161...47,582,819 		JBrowse link
G YY1 YY1 transcription factor involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 7:121,132,168...121,170,699
Ensembl chr 7:121,132,191...121,170,697 		JBrowse link
G ZBTB1 zinc finger and BTB domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:88,575,563...88,602,726
Ensembl chr 7:88,576,008...88,602,724 		JBrowse link
cellular response to UV-A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MME membrane metalloendopeptidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:95,018,395...95,122,977
Ensembl chr13:95,019,081...95,126,045 		JBrowse link
G MMP1 matrix metallopeptidase 1 involved_in ISS
IEA		 UniProt
Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:33,411,738...33,420,205
Ensembl chr 9:33,411,065...33,420,076 		JBrowse link
G MMP2 matrix metallopeptidase 2 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 6:30,059,247...30,087,031
Ensembl chr 6:30,058,595...30,086,982 		JBrowse link
G MMP3 matrix metallopeptidase 3 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 9:33,446,969...33,453,995
Ensembl chr 9:33,446,836...33,454,000 		JBrowse link
G MMP9 matrix metallopeptidase 9 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr17:48,179,690...48,186,782
Ensembl chr17:48,179,671...48,186,788 		JBrowse link
G OPN1SW opsin 1, short wave sensitive involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr18:19,836,453...19,839,425
Ensembl chr18:19,836,453...19,839,425 		JBrowse link
G OPN5 opsin 5 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 7:42,476,125...42,507,181
Ensembl chr 7:42,476,125...42,527,121 		JBrowse link
G PPID peptidylprolyl isomerase D involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 8:47,656,269...47,702,805
Ensembl chr 8:47,656,273...47,702,748 		JBrowse link
G TIMP1 TIMP metallopeptidase inhibitor 1 involved_in ISS
IEA		 UniProt
Ensembl
UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:42,103,251...42,106,289
Ensembl chr  X:42,102,172...42,106,296 		JBrowse link
cellular response to UV-B term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDKN1A cyclin dependent kinase inhibitor 1A involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 7:32,354,776...32,363,771
Ensembl chr 7:32,359,455...32,363,761 		JBrowse link
G HYAL1 hyaluronidase 1 involved_in ISS
IEA		 UniProt
Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr13:32,798,135...32,800,705
Ensembl chr13:32,797,681...32,800,793 		JBrowse link
G HYAL2 hyaluronidase 2 involved_in ISS
IEA		 UniProt
UniProt
Ensembl
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr13:32,805,220...32,813,684
Ensembl chr13:32,805,227...32,815,333 		JBrowse link
G HYAL3 hyaluronidase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:32,790,843...32,796,995
Ensembl chr13:32,790,850...32,796,563 		JBrowse link
G LOC110258364 cysteine-rich protein 1 involved_in ISO (PMID:20415737) UniProt PMID:20415737
G MAP3K20 mitogen-activated protein kinase kinase kinase 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:79,174,444...79,378,520
Ensembl chr15:79,173,033...79,380,993 		JBrowse link
G MAPK11 mitogen-activated protein kinase 11 involved_in ISO (PMID:35857590) UniProt PMID:35857590 NCBI chr 5:420,848...428,103
Ensembl chr 5:421,798...428,101 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:31,791,398...31,861,544
Ensembl chr 7:31,790,877...31,862,031 		JBrowse link
G MFAP4 microfibril associated protein 4 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr12:60,141,488...60,144,214
Ensembl chr12:60,137,566...60,144,207 		JBrowse link
G MME membrane metalloendopeptidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:95,018,395...95,122,977
Ensembl chr13:95,019,081...95,126,045 		JBrowse link
G NLRP1 NLR family pyrin domain containing 1 involved_in ISO (PMID:30096351) UniProt PMID:30096351 NCBI chr12:51,479,968...51,495,540 JBrowse link
G RPL13A ribosomal protein L13a ISO RGD PMID:10483362 RGD:11036101 NCBI chr 6:54,551,772...54,568,752
Ensembl chr 6:54,551,533...54,561,489 		JBrowse link
G RPL35 ribosomal protein L35 ISO RGD PMID:10483362 RGD:11036101 NCBI chr 1:265,637,266...265,642,278
Ensembl chr 1:265,636,637...265,645,593 		JBrowse link
G STK11 serine/threonine kinase 11 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 2:77,229,888...77,249,322
Ensembl chr 2:77,230,372...77,249,327 		JBrowse link
cellular response to UV-C term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EI24 EI24 autophagy associated transmembrane protein acts_upstream_of_or_within ISO (MGI:5543725|PMID:24014029) MGI PMID:24014029 MGI:5543725 NCBI chr 9:52,704,560...52,724,966
Ensembl chr 9:52,704,570...52,720,938 		JBrowse link
G HRH4 histamine receptor H4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:109,302,264...109,318,607
Ensembl chr 6:109,303,820...109,319,479 		JBrowse link
G IMPACT impact RWD domain protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:109,235,590...109,272,801
Ensembl chr 6:109,235,585...109,272,793 		JBrowse link
G MDM2 MDM2 proto-oncogene ISO RGD PMID:14558917 RGD:2317408 NCBI chr 5:33,105,717...33,137,602
Ensembl chr 5:33,105,759...33,137,739 		JBrowse link
G PIERCE1 piercer of microtubule wall 1 acts_upstream_of_or_within ISO (MGI:4868626|PMID:21159655) MGI PMID:21159655 MGI:4868626
G POLH DNA polymerase eta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3695544|PMID:17114294) Ensembl
Ensembl
MGI		 PMID:17114294 GO_REF:0000107 MGI:3695544 NCBI chr 7:38,569,211...38,601,794
Ensembl chr 7:38,567,788...38,601,790 		JBrowse link
G POLI DNA polymerase iota acts_upstream_of_or_within ISO (MGI:3695544|PMID:17114294) MGI PMID:17114294 MGI:3695544 NCBI chr 1:103,793,779...103,820,365
Ensembl chr 1:103,794,281...103,824,644 		JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:5543725|PMID:24014029) Ensembl
Ensembl
MGI		 PMID:24014029 GO_REF:0000107 MGI:5543725 NCBI chr12:52,939,643...52,953,786
Ensembl chr12:52,939,644...52,953,818 		JBrowse link
dark adaptation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNB5 G protein subunit beta 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5507748|PMID:23555598) MGI
Ensembl
Ensembl		 PMID:23555598 GO_REF:0000107 MGI:5507748 NCBI chr 1:119,545,382...119,589,860
Ensembl chr 1:119,537,551...119,589,865 		JBrowse link
G RGS9 regulator of G protein signaling 9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5507748|PMID:23555598) MGI
Ensembl
Ensembl		 PMID:23555598 GO_REF:0000107 MGI:5507748 NCBI chr12:12,015,321...12,087,982
Ensembl chr12:12,015,321...12,087,976 		JBrowse link
G TENT2 terminal nucleotidyltransferase 2 ISO RGD PMID:23700402 RGD:11041783 NCBI chr 2:88,328,250...88,388,242
Ensembl chr 2:88,328,258...88,388,241 		JBrowse link
DNA synthesis involved in UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POLA1 DNA polymerase alpha 1, catalytic subunit NOT|involved_in ISO (PMID:1730053) UniProt PMID:1730053 NCBI chr  X:20,756,674...21,064,265
Ensembl chr  X:20,756,725...21,062,175 		JBrowse link
G POLD3 DNA polymerase delta 3, accessory subunit involved_in IBA (PMID:21873635) GO_Central
GO_Central		 PMID:21873635 NCBI chr 9:8,906,491...8,956,845
Ensembl chr 9:8,906,462...8,958,318 		JBrowse link
G TREX1 three prime repair exonuclease 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:5562498|PMID:23993650) Ensembl
Ensembl
MGI		 PMID:23993650 GO_REF:0000107 MGI:5562498 NCBI chr13:31,177,604...31,180,764
Ensembl chr13:31,179,291...31,180,747 		JBrowse link
negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NEDD4 NEDD4 E3 ubiquitin protein ligase involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 1:115,941,945...116,069,884
Ensembl chr 1:115,941,940...116,070,305 		JBrowse link
phototransduction, UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OPN5 opsin 5 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 7:42,476,125...42,507,181
Ensembl chr 7:42,476,125...42,527,121 		JBrowse link
red, far-red light phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RHO rhodopsin ISO RGD PMID:2525480 RGD:6893558 NCBI chr13:68,908,578...68,913,651
Ensembl chr13:68,908,578...68,913,651 		JBrowse link
regulation of mRNA stability involved in cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPM1 nucleophosmin 1 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr16:52,767,263...52,781,862
Ensembl chr16:52,765,298...52,781,771 		JBrowse link
regulation of rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIPL1 aryl hydrocarbon receptor interacting protein like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3054118|PMID:15365173)
(MGI:3054134|PMID:15365178)		 Ensembl
Ensembl
MGI		 PMID:15365173 PMID:15365178 GO_REF:0000107 MGI:3054118 MGI:3054134 NCBI chr12:50,903,358...50,917,187
Ensembl chr12:50,903,358...50,917,111 		JBrowse link
G GRK1 G protein-coupled receptor kinase 1 involved_in IEA Ensembl
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr11:78,793,670...78,803,291
Ensembl chr11:78,793,777...78,804,262 		JBrowse link
regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHEK1 checkpoint kinase 1 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 9:52,759,224...52,790,878
Ensembl chr 9:52,753,528...52,790,700 		JBrowse link
regulation of translation involved in cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RPL26 ribosomal protein L26 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr12:53,548,313...53,553,453
Ensembl chr12:53,548,321...53,553,455 		JBrowse link
rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNAT1 G protein subunit alpha transducin 1 ISO RGD PMID:11931744 RGD:1599009 NCBI chr13:32,671,377...32,678,394
Ensembl chr13:32,671,432...32,678,391 		JBrowse link
G OPN4 opsin 4 acts_upstream_of_or_within ISO (MGI:4438311|PMID:19793992) MGI PMID:19793992 MGI:4438311 NCBI chr14:87,645,563...87,660,820
Ensembl chr14:87,647,238...87,658,815 		JBrowse link
G PCP2 Purkinje cell protein 2 acts_upstream_of_or_within ISO (MGI:3817370|PMID:18768681) MGI PMID:18768681 MGI:3817370 NCBI chr 2:71,471,071...71,519,394
Ensembl chr 2:71,471,417...71,519,421 		JBrowse link
G RHO rhodopsin involved_in ISS
ISO		 UniProt
UniProt
RGD		 PMID:8814134 GO_REF:0000024 RGD:6893595 NCBI chr13:68,908,578...68,913,651
Ensembl chr13:68,908,578...68,913,651 		JBrowse link
UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTR5 actin related protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:41,702,273...41,724,398
Ensembl chr17:41,702,540...41,724,393 		JBrowse link
G CUL4B cullin 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:98,668,945...98,730,582
Ensembl chr  X:98,668,953...98,730,565 		JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 2:10,171,554...10,201,602
Ensembl chr 2:10,171,502...10,201,598 		JBrowse link
G DDB2 damage specific DNA binding protein 2 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 2:15,342,614...15,370,623
Ensembl chr 2:15,337,743...15,383,120 		JBrowse link
G H2AC25 H2A clustered histone 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:51,688,375...51,704,824
Ensembl chr 2:51,693,853...51,694,245 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 1:130,201,705...130,341,627
Ensembl chr 1:130,201,718...130,342,838 		JBrowse link
G MC1R melanocortin 1 receptor involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 6:181,225...182,187
Ensembl chr 6:181,225...182,187 		JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr14:71,091,167...71,126,351
Ensembl chr14:71,091,167...71,123,297 		JBrowse link
G XPA XPA, DNA damage recognition and repair factor involved_in IBA (PMID:21873635) GO_Central
GO_Central		 PMID:21873635 NCBI chr 1:239,532,331...239,568,589
Ensembl chr 1:239,532,272...239,568,570 		JBrowse link
G XPC XPC complex subunit, DNA damage recognition and repair factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:70,348,841...70,397,194
Ensembl chr13:70,348,864...70,397,772 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17484
    response to stimulus 9732
      response to abiotic stimulus 1552
        response to radiation 553
          response to light stimulus 369
            cellular response to light stimulus 122
              cellular response to UV + 100
              cellular response to blue light + 0
              cellular response to light intensity + 5
              cellular response to red or far red light + 1
              rhodopsin mediated signaling pathway + 8
Path 2
Term Annotations click to browse term
  biological_process 17484
    cellular process 16257
      cellular response to stimulus 8281
        cellular response to environmental stimulus 427
          cellular response to abiotic stimulus 427
            cellular response to radiation 199
              cellular response to light stimulus 122
                cellular response to UV + 100
                cellular response to blue light + 0
                cellular response to light intensity + 5
                cellular response to red or far red light + 1
                rhodopsin mediated signaling pathway + 8
paths to the root