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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to light stimulus
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Accession:GO:0071482 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light.


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cellular response to light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crb1 crumbs cell polarity complex component 1 acts_upstream_of_or_within ISO (MGI:3696487|PMID:17234588) MGI PMID:17234588 MGI:3696487 NCBI chrNW_004955406:33,817,754...34,005,937
Ensembl chrNW_004955406:33,817,605...34,005,943
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:17475674 RGD:9068879 NCBI chrNW_004955466:8,000,311...8,022,497
Ensembl chrNW_004955466:8,000,044...8,022,497
JBrowse link
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 ISO RGD PMID:24202060 RGD:12910722 NCBI chrNW_004955407:33,807,581...33,814,356
Ensembl chrNW_004955407:33,807,581...33,814,356
JBrowse link
G Opn5 opsin 5 involved_in ISO (MGI:6376341|PMID:31607531) UniProt PMID:31607531 MGI:6376341 NCBI chrNW_004955437:12,171,544...12,197,409
Ensembl chrNW_004955437:12,171,544...12,213,264
JBrowse link
G Rho rhodopsin acts_upstream_of_or_within ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955429:17,787,337...17,791,982
Ensembl chrNW_004955429:17,787,337...17,791,982
JBrowse link
G Rp1 RP1 axonemal microtubule associated acts_upstream_of_or_within ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955454:13,781,556...14,082,310 JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator acts_upstream_of_or_within ISO (MGI:1354839|PMID:10725384) MGI PMID:10725384 MGI:1354839 NCBI chrNW_004955601:398,772...453,271 JBrowse link
G Trpm1 transient receptor potential cation channel subfamily M member 1 involved_in
acts_upstream_of_or_within
ISO (PMID:19896109)
(MGI:4849309|PMID:21052544)
(MGI:4398796|PMID:19861548)
(MGI:4420740|PMID:19966281)
UniProt
MGI
PMID:19861548 PMID:19896109 PMID:19966281 PMID:21052544 MGI:4398796 MGI:4420740 MGI:4849309 NCBI chrNW_004955416:29,846,374...29,880,922
Ensembl chrNW_004955416:29,814,077...29,939,344
JBrowse link
adaptation of rhodopsin mediated signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rdh11 retinol dehydrogenase 11 acts_upstream_of_or_within ISO (MGI:3584215|PMID:15790565) MGI PMID:15790565 MGI:3584215 NCBI chrNW_004955466:2,506,641...2,521,506
Ensembl chrNW_004955466:2,508,338...2,520,903
JBrowse link
cellular response to high light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt2 AKT serine/threonine kinase 2 acts_upstream_of_or_within ISO (MGI:3695811|PMID:17202487) MGI PMID:17202487 MGI:3695811 NCBI chrNW_004955578:950,258...1,004,438
Ensembl chrNW_004955578:967,593...1,004,438
JBrowse link
G Slc24a4 solute carrier family 24 member 4 involved_in ISO (MGI:6116933|PMID:28650316) ARUK-UCL PMID:28650316 MGI:6116933 NCBI chrNW_004955438:14,609,779...14,765,516
Ensembl chrNW_004955438:14,609,424...14,759,673
JBrowse link
cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 (Colton blood group) involved_in ISO (PMID:19424603) UniProt PMID:19424603 NCBI chrNW_004955410:32,066,196...32,078,661
Ensembl chrNW_004955410:32,066,196...32,078,717
JBrowse link
G Atr ATR serine/threonine kinase involved_in ISO (PMID:9925639) BHF-UCL PMID:9925639 NCBI chrNW_004955508:3,337,036...3,440,313
Ensembl chrNW_004955508:3,337,432...3,440,257
JBrowse link
G Aurkb aurora kinase B involved_in ISO (PMID:20959462) UniProt PMID:20959462 NCBI chrNW_004955467:8,715,387...8,720,889
Ensembl chrNW_004955467:8,715,136...8,723,932
JBrowse link
G Bak1 BCL2 antagonist/killer 1 involved_in ISO (PMID:15901672)
(MGI:3689797|PMID:15901672)
UniProt PMID:15901672 MGI:3689797 NCBI chrNW_004955437:2,036,415...2,041,997
Ensembl chrNW_004955437:2,036,415...2,041,997
JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO (MGI:3042308|PMID:14963330) MGI PMID:14963330 MGI:3042308 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
G Bmf Bcl2 modifying factor involved_in ISO (PMID:23629966)
(MGI:5490676|PMID:23629966)
CAFA PMID:23629966 MGI:5490676 NCBI chrNW_004955416:7,048,654...7,068,917
Ensembl chrNW_004955416:7,052,290...7,068,910
JBrowse link
G Casp9 caspase 9 involved_in ISO (PMID:15657060) UniProt PMID:15657060 NCBI chrNW_004955527:2,613,691...2,630,217
Ensembl chrNW_004955527:2,613,683...2,629,738
JBrowse link
G Cdc25a cell division cycle 25A involved_in ISO (PMID:19966869) UniProt PMID:19966869 NCBI chrNW_004955420:24,345,002...24,361,802
Ensembl chrNW_004955420:24,344,388...24,362,596
JBrowse link
G Cops9 COP9 signalosome subunit 9 involved_in ISO (PMID:26456823) UniProt PMID:26456823 NCBI chrNW_004955542:1,131,110...1,135,871
Ensembl chrNW_004955542:1,131,110...1,135,871
JBrowse link
G Crebbp CREB binding protein involved_in ISO (PMID:24939902) UniProt PMID:24939902 NCBI chrNW_004955442:13,559,496...13,691,913
Ensembl chrNW_004955442:13,559,496...13,692,004
JBrowse link
G Cul4a cullin 4A involved_in ISO (PMID:22118460)
(MGI:6867266|PMID:22118460)
ComplexPortal PMID:22118460 MGI:6867266 NCBI chrNW_004955404:583,261...617,914
Ensembl chrNW_004955404:583,261...617,914
JBrowse link
G Ddb1 damage specific DNA binding protein 1 involved_in ISO (PMID:22118460)
(MGI:6867266|PMID:22118460)
ComplexPortal PMID:22118460 MGI:6867266 NCBI chrNW_004955511:6,209,777...6,233,594
Ensembl chrNW_004955511:6,209,777...6,233,594
JBrowse link
G Ddb2 damage specific DNA binding protein 2 involved_in ISO (PMID:22118460)
(MGI:6867266|PMID:22118460)
ComplexPortal PMID:22118460 MGI:6867266 NCBI chrNW_004955422:961,602...977,066
Ensembl chrNW_004955422:961,893...974,338
JBrowse link
G Ddias DNA damage induced apoptosis suppressor acts_upstream_of_or_within ISO (MGI:3718924|PMID:17515607) MGI PMID:17515607 MGI:3718924 NCBI chrNW_004955414:9,607,338...9,636,941
Ensembl chrNW_004955414:9,607,064...9,630,781
JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO (PMID:27940037) UniProt PMID:27940037 NCBI chrNW_004955448:5,634,072...5,676,272
Ensembl chrNW_004955448:5,634,072...5,676,319
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:5700311|PMID:12176355) UniProt PMID:12176355 MGI:5700311 NCBI chrNW_004955416:6,897,897...7,005,602
Ensembl chrNW_004955416:6,897,848...7,009,965
JBrowse link
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha involved_in ISO (MGI:5700311|PMID:12176355) UniProt PMID:12176355 MGI:5700311 NCBI chrNW_004955466:2,838,785...2,855,443
Ensembl chrNW_004955466:2,838,785...2,855,172
JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:24939902) UniProt PMID:24939902 NCBI chrNW_004955413:26,647,553...26,727,875
Ensembl chrNW_004955413:26,648,339...26,727,933
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in ISO (PMID:17055345)
(PMID:32034146)
BHF-UCL
UniProt
PMID:17055345 PMID:32034146 NCBI chrNW_004955442:4,833,453...4,861,201
Ensembl chrNW_004955442:4,831,721...4,861,122
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO (PMID:17873522) UniProt PMID:17873522 NCBI chrNW_004955471:6,852,459...7,026,590
Ensembl chrNW_004955471:6,848,101...6,955,881
JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:18026119) UniProt PMID:18026119 NCBI chrNW_004955416:7,870,521...8,020,862
Ensembl chrNW_004955416:7,870,258...7,961,812
JBrowse link
G Kdm1a lysine demethylase 1A acts_upstream_of_or_within ISO (PMID:24217620) MGI PMID:24217620 NCBI chrNW_004955452:3,044,042...3,104,650
Ensembl chrNW_004955452:3,044,264...3,104,418
JBrowse link
G Mapk13 mitogen-activated protein kinase 13 involved_in ISO (PMID:9218798) UniProt PMID:9218798 NCBI chrNW_004955437:3,899,988...3,907,781
Ensembl chrNW_004955437:3,899,950...3,909,114
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 ISO RGD PMID:8875991 RGD:2304246 NCBI chrNW_004955408:391,094...430,638
Ensembl chrNW_004955408:391,094...430,981
JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:28297716) UniProt PMID:28297716 NCBI chrNW_004955550:2,211,270...2,227,715
Ensembl chrNW_004955550:2,211,270...2,227,715
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISO (PMID:17873522) UniProt PMID:17873522 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982
JBrowse link
G N4bp1 NEDD4 binding protein 1 involved_in ISO (PMID:17592138)
(MGI:3829128|PMID:17592138)
BHF-UCL PMID:17592138 MGI:3829128 NCBI chrNW_004955474:6,796,068...6,814,906
Ensembl chrNW_004955474:6,796,066...6,814,906
JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase involved_in ISO (PMID:17996703) BHF-UCL PMID:17996703 NCBI chrNW_004955409:183,645...281,252
Ensembl chrNW_004955409:183,545...281,318
JBrowse link
G Nfatc4 nuclear factor of activated T cells 4 acts_upstream_of_or_within ISO (MGI:3709926|PMID:17242187) MGI PMID:17242187 MGI:3709926 NCBI chrNW_004955409:35,931,208...35,941,555
Ensembl chrNW_004955409:35,931,173...35,940,696
JBrowse link
G Noc2l NOC2 like nucleolar associated transcriptional repressor involved_in ISO (PMID:20959462) UniProt PMID:20959462 NCBI chrNW_004955486:9,750,969...9,763,622
Ensembl chrNW_004955486:9,751,053...9,767,104
JBrowse link
G Npm1 nucleophosmin 1 involved_in ISO (PMID:19160485) CAFA PMID:19160485 NCBI chrNW_004955408:24,151,070...24,218,783 JBrowse link
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component involved_in ISO (PMID:27427983) UniProt PMID:27427983 NCBI chrNW_004955416:29,261,347...29,262,696 JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in ISO (PMID:24289924) BHF-UCL PMID:24289924 NCBI chrNW_004955489:520,875...557,609
Ensembl chrNW_004955489:520,875...557,615
JBrowse link
G Pbk PDZ binding kinase acts_upstream_of_or_within ISO (MGI:5293269|PMID:21715333) MGI PMID:21715333 MGI:5293269 NCBI chrNW_004955403:50,332,167...50,353,147
Ensembl chrNW_004955403:50,330,981...50,352,570
JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO (PMID:24939902) RGD
UniProt
PMID:8905661 PMID:24939902 RGD:10448977 NCBI chrNW_004955415:15,744,601...15,748,910
Ensembl chrNW_004955415:15,744,601...15,749,673
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 acts_upstream_of_or_within ISO (MGI:3709926|PMID:17242187) MGI PMID:17242187 MGI:3709926 NCBI chrNW_004955446:1,020,707...1,098,327
Ensembl chrNW_004955446:1,020,043...1,098,820
JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in ISO (PMID:24939902) UniProt PMID:24939902 NCBI chrNW_004955559:712,375...730,551
Ensembl chrNW_004955559:712,321...725,661
JBrowse link
G Polk DNA polymerase kappa involved_in ISO (PMID:28297716) UniProt PMID:28297716 NCBI chrNW_004955425:25,164,749...25,228,064
Ensembl chrNW_004955425:25,161,222...25,228,524
JBrowse link
G Ppp1r15a protein phosphatase 1 regulatory subunit 15A ISO RGD PMID:9811446 RGD:9999409 NCBI chrNW_004955559:1,750,227...1,753,607
Ensembl chrNW_004955559:1,750,168...1,753,629
JBrowse link
G Prkcd protein kinase C delta involved_in ISO (PMID:17303575) UniProt PMID:17303575 NCBI chrNW_004955430:3,125,066...3,151,857
Ensembl chrNW_004955430:3,124,738...3,153,274
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:22306367 RGD:5688265 NCBI chrNW_004955406:25,077,988...25,086,259
Ensembl chrNW_004955406:25,079,945...25,086,171
JBrowse link
G Ptn pleiotrophin ISO RGD PMID:17925408 RGD:10044023 NCBI chrNW_004955494:5,580,264...5,681,848
Ensembl chrNW_004955494:5,580,422...5,684,190
JBrowse link
G Ptprk protein tyrosine phosphatase receptor type K involved_in ISO (PMID:16849327) UniProt PMID:16849327 NCBI chrNW_004955436:8,975,742...9,371,608
Ensembl chrNW_004955436:8,975,554...9,380,971
JBrowse link
G Rbx1 ring-box 1 involved_in ISO (PMID:22118460)
(MGI:6867266|PMID:22118460)
ComplexPortal PMID:22118460 MGI:6867266 NCBI chrNW_004955413:26,579,759...26,592,980
Ensembl chrNW_004955413:26,579,759...26,592,980
JBrowse link
G Rhbdd1 rhomboid domain containing 1 involved_in ISO (MGI:5430884|PMID:19358743) UniProt PMID:19358743 MGI:5430884 NCBI chrNW_004955453:7,527,090...7,656,689
Ensembl chrNW_004955453:7,528,916...7,644,477
JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in ISO (PMID:21659603) UniProt PMID:21659603 NCBI chrNW_004955429:18,408,121...18,415,832
Ensembl chrNW_004955429:18,408,117...18,415,832
JBrowse link
G Rnf168 ring finger protein 168 acts_upstream_of_or_within ISO (MGI:5562615|PMID:24217620) MGI PMID:24217620 MGI:5562615 NCBI chrNW_004955420:12,656,815...12,676,836
Ensembl chrNW_004955420:12,657,272...12,676,426
JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chrNW_004955467:8,519,760...8,525,514
Ensembl chrNW_004955467:8,519,760...8,527,182
JBrowse link
G Ruvbl2 RuvB like AAA ATPase 2 involved_in ISO (PMID:18026119) UniProt PMID:18026119 NCBI chrNW_004955559:1,657,241...1,674,272
Ensembl chrNW_004955559:1,654,059...1,674,272
JBrowse link
G Sde2 SDE2 telomere maintenance homolog involved_in ISO (PMID:27906959) UniProt PMID:27906959 NCBI chrNW_004955489:181,425...210,966
Ensembl chrNW_004955489:180,414...210,900
JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in ISO (PMID:17303575) UniProt PMID:17303575 NCBI chrNW_004955414:22,117,929...22,121,744
Ensembl chrNW_004955414:22,117,930...22,121,744
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:24289924) ParkinsonsUK-UCL PMID:24289924 NCBI chrNW_004955475:10,930,175...11,006,876
Ensembl chrNW_004955475:10,930,192...11,005,724
JBrowse link
G Tmem161a transmembrane protein 161A involved_in ISO (PMID:16551573) BHF-UCL PMID:16551573 NCBI chrNW_004955524:2,667,089...2,674,550
Ensembl chrNW_004955524:2,666,885...2,674,215
JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
ISO (PMID:16213212), (PMID:23629966)
(MGI:3042308|PMID:14963330)
(MGI:5490676|PMID:23629966)
CAFA
MGI
PMID:14963330 PMID:16213212 PMID:23629966 MGI:3042308 MGI:5490676 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
G Tp53inp1 tumor protein p53 inducible nuclear protein 1 acts_upstream_of_or_within ISO (MGI:2153600|PMID:11557757) MGI PMID:11557757 MGI:2153600 NCBI chrNW_004955417:11,063,217...11,079,389
Ensembl chrNW_004955417:11,067,715...11,073,635
JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (MGI:5014018|PMID:20511593) MGI PMID:20511593 MGI:5014018 NCBI chrNW_004955532:533,877...535,767
Ensembl chrNW_004955532:533,877...535,767
JBrowse link
G Triap1 TP53 regulated inhibitor of apoptosis 1 involved_in ISO (PMID:15735003) BHF-UCL PMID:15735003 NCBI chrNW_004955455:11,195,399...11,198,402
Ensembl chrNW_004955455:11,195,399...11,198,402
JBrowse link
G Usp28 ubiquitin specific peptidase 28 involved_in ISO (PMID:17873522) UniProt PMID:17873522 NCBI chrNW_004955412:15,425,136...15,469,819
Ensembl chrNW_004955412:15,426,159...15,443,023
JBrowse link
G Usp47 ubiquitin specific peptidase 47 involved_in ISO (MGI:4839431|PMID:19966869) UniProt PMID:19966869 MGI:4839431 NCBI chrNW_004955414:27,357,602...27,462,481
Ensembl chrNW_004955414:27,357,602...27,462,731
JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:18026119) UniProt PMID:18026119 NCBI chrNW_004955438:21,341,374...21,377,674 JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (PMID:24657165) UniProt PMID:24657165 NCBI chrNW_004955466:5,353,355...5,376,240
Ensembl chrNW_004955466:5,355,344...5,376,240
JBrowse link
cellular response to UV-A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cers1 ceramide synthase 1 involved_in ISO (PMID:19800881) UniProt PMID:19800881 NCBI chrNW_004955524:2,788,672...2,798,068
Ensembl chrNW_004955524:2,788,653...2,796,370
JBrowse link
G Mme membrane metalloendopeptidase involved_in ISO (PMID:20876573) UniProt PMID:20876573 NCBI chrNW_004955448:6,193,113...6,311,666
Ensembl chrNW_004955448:6,226,059...6,314,949
JBrowse link
G Mmp2 matrix metallopeptidase 2 involved_in ISO (PMID:31380578) UniProt PMID:31380578 NCBI chrNW_004955433:13,024,844...13,050,041
Ensembl chrNW_004955433:13,024,418...13,052,775
JBrowse link
G Mmp9 matrix metallopeptidase 9 involved_in ISO (PMID:31380578) UniProt PMID:31380578 NCBI chrNW_004955445:11,295,500...11,303,322
Ensembl chrNW_004955445:11,295,448...11,303,288
JBrowse link
G Opn1sw opsin 1, short wave sensitive involved_in ISO (PMID:31380578) UniProt PMID:31380578 NCBI chrNW_004955479:9,573,594...9,576,668
Ensembl chrNW_004955479:9,573,594...9,576,668
JBrowse link
G Opn3 opsin 3 involved_in ISO (PMID:31380578) UniProt PMID:31380578 NCBI chrNW_004955406:10,450,810...10,493,958
Ensembl chrNW_004955406:10,450,768...10,493,958
JBrowse link
G Opn5 opsin 5 involved_in ISO (PMID:31380578) UniProt PMID:31380578 NCBI chrNW_004955437:12,171,544...12,197,409
Ensembl chrNW_004955437:12,171,544...12,213,264
JBrowse link
G Ppid peptidylprolyl isomerase D involved_in ISO (PMID:23220213) UniProt PMID:23220213 NCBI chrNW_004955471:12,309,224...12,323,198
Ensembl chrNW_004955471:12,305,236...12,323,198
JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 involved_in ISO (PMID:31380578) UniProt PMID:31380578 NCBI chrNW_004955516:507,113...511,360
Ensembl chrNW_004955516:505,789...512,118
JBrowse link
cellular response to UV-B term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn1a cyclin dependent kinase inhibitor 1A involved_in ISO (MGI:5613877|PMID:25329316) UniProt PMID:25329316 MGI:5613877 NCBI chrNW_004955437:6,254,638...6,261,278
Ensembl chrNW_004955437:6,254,309...6,261,479
JBrowse link
G Crip1 cysteine rich protein 1 involved_in ISO (PMID:20415737) UniProt PMID:20415737 NCBI chrNW_004955538:3,683,747...3,686,468 JBrowse link
G Hyal1 hyaluronidase 1 involved_in ISO (PMID:21699545) UniProt PMID:21699545 NCBI chrNW_004955532:2,113,016...2,116,093
Ensembl chrNW_004955532:2,112,771...2,115,952
JBrowse link
G Hyal2 hyaluronidase 2 involved_in ISO (PMID:21699545) UniProt PMID:21699545 NCBI chrNW_004955532:2,120,781...2,125,083
Ensembl chrNW_004955532:2,120,781...2,123,726
JBrowse link
G Hyal3 hyaluronidase 3 involved_in ISO (PMID:21699545) UniProt PMID:21699545 NCBI chrNW_004955532:2,107,019...2,112,356
Ensembl chrNW_004955532:2,106,565...2,108,892
JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 involved_in ISO (PMID:35857590) UniProt PMID:35857590 NCBI chrNW_004955449:1,976,186...2,139,044 JBrowse link
G Mapk11 mitogen-activated protein kinase 11 involved_in ISO (PMID:35857590) UniProt PMID:35857590 NCBI chrNW_004955413:33,287,860...33,293,948
Ensembl chrNW_004955413:33,286,390...33,294,227
JBrowse link
G Mapk14 mitogen-activated protein kinase 14 involved_in ISO (PMID:35857590) UniProt PMID:35857590 NCBI chrNW_004955437:3,836,331...3,884,083
Ensembl chrNW_004955437:3,838,232...3,884,083
JBrowse link
G Mfap4 microfibril associated protein 4 involved_in ISO (PMID:22355679) BHF-UCL PMID:22355679 NCBI chrNW_004955467:378,389...381,593
Ensembl chrNW_004955467:377,887...381,593
JBrowse link
G Mme membrane metalloendopeptidase involved_in ISO (PMID:20876573) UniProt PMID:20876573 NCBI chrNW_004955448:6,193,113...6,311,666
Ensembl chrNW_004955448:6,226,059...6,314,949
JBrowse link
G Rpl13a ribosomal protein L13a ISO RGD PMID:10483362 RGD:11036101 NCBI chrNW_004955559:1,358,479...1,362,663
Ensembl chrNW_004955559:1,358,486...1,362,663
JBrowse link
G Rpl35 ribosomal protein L35 ISO RGD PMID:10483362 RGD:11036101 NCBI chrNW_004955419:3,371,109...3,374,555
Ensembl chrNW_004955419:3,371,109...3,374,555
JBrowse link
G Stk11 serine/threonine kinase 11 involved_in ISO (PMID:25329316)
(MGI:5613877|PMID:25329316)
UniProt PMID:25329316 MGI:5613877 NCBI chrNW_004955495:6,678,195...6,699,408
Ensembl chrNW_004955495:6,678,195...6,699,058
JBrowse link
cellular response to UV-C term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ei24 EI24 autophagy associated transmembrane protein acts_upstream_of_or_within ISO (MGI:5543725|PMID:24014029) MGI PMID:24014029 MGI:5543725 NCBI chrNW_004955412:26,574,814...26,586,154
Ensembl chrNW_004955412:26,574,866...26,585,161
JBrowse link
G Impact impact RWD domain protein involved_in ISO (MGI:5576818|PMID:24333428) UniProt PMID:24333428 MGI:5576818 NCBI chrNW_004955402:12,752,748...12,781,238
Ensembl chrNW_004955402:12,752,432...12,779,299
JBrowse link
G Mdm2 MDM2 proto-oncogene ISO RGD PMID:14558917 RGD:2317408 NCBI chrNW_004955458:15,264,028...15,287,290
Ensembl chrNW_004955458:15,263,739...15,286,808
JBrowse link
G Pierce1 piercer of microtubule wall 1 acts_upstream_of_or_within ISO (MGI:4868626|PMID:21159655) MGI PMID:21159655 MGI:4868626 NCBI chrNW_004955513:4,047,764...4,055,692
Ensembl chrNW_004955513:4,052,413...4,055,691
JBrowse link
G Polh DNA polymerase eta acts_upstream_of_or_within ISO (MGI:3695544|PMID:17114294) MGI PMID:17114294 MGI:3695544 NCBI chrNW_004955437:9,392,484...9,409,186
Ensembl chrNW_004955437:9,397,141...9,414,042
JBrowse link
G Poli DNA polymerase iota acts_upstream_of_or_within ISO (MGI:3695544|PMID:17114294) MGI PMID:17114294 MGI:3695544 NCBI chrNW_004955402:38,866,528...38,891,235
Ensembl chrNW_004955402:38,866,744...38,891,011
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:5543725|PMID:24014029) MGI PMID:24014029 MGI:5543725 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
dark adaptation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnb5 G protein subunit beta 5 acts_upstream_of_or_within ISO (MGI:5507748|PMID:23555598) MGI PMID:23555598 MGI:5507748 NCBI chrNW_004955409:2,621,144...2,642,298
Ensembl chrNW_004955409:2,619,718...2,641,308
JBrowse link
G Rgs9 regulator of G protein signaling 9 acts_upstream_of_or_within ISO (MGI:5507748|PMID:23555598) MGI PMID:23555598 MGI:5507748 NCBI chrNW_004955478:4,614,730...4,683,152
Ensembl chrNW_004955478:4,614,701...4,683,167
JBrowse link
G Tent2 terminal nucleotidyltransferase 2 ISO RGD PMID:23700402 RGD:11041783 NCBI chrNW_004955425:21,518,154...21,576,068
Ensembl chrNW_004955425:21,517,755...21,576,068
JBrowse link
DNA synthesis involved in UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pola1 DNA polymerase alpha 1, catalytic subunit NOT|involved_in ISO (PMID:1730053) UniProt PMID:1730053 NCBI chrNW_004955509:5,007,385...5,319,683
Ensembl chrNW_004955509:5,007,182...5,319,894
JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (MGI:5562498|PMID:23993650) MGI PMID:23993650 MGI:5562498 NCBI chrNW_004955532:533,877...535,767
Ensembl chrNW_004955532:533,877...535,767
JBrowse link
phototransduction, UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Opn5 opsin 5 involved_in ISO (PMID:22043319)
(MGI:6230806|PMID:22043319)
UniProt PMID:22043319 MGI:6230806 NCBI chrNW_004955437:12,171,544...12,197,409
Ensembl chrNW_004955437:12,171,544...12,213,264
JBrowse link
red, far-red light phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rho rhodopsin ISO RGD PMID:2525480 RGD:6893558 NCBI chrNW_004955429:17,787,337...17,791,982
Ensembl chrNW_004955429:17,787,337...17,791,982
JBrowse link
regulation of mRNA stability involved in cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Npm1 nucleophosmin 1 involved_in ISO (PMID:12080348) UniProt PMID:12080348 NCBI chrNW_004955408:24,151,070...24,218,783 JBrowse link
regulation of rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor interacting protein like 1 acts_upstream_of_or_within ISO (MGI:3054118|PMID:15365173)
(MGI:3054134|PMID:15365178)
MGI PMID:15365173 PMID:15365178 MGI:3054118 MGI:3054134 NCBI chrNW_004955467:11,952,940...11,962,147
Ensembl chrNW_004955467:11,952,495...11,962,153
JBrowse link
G Grk1 G protein-coupled receptor kinase 1 involved_in ISO (PMID:15946941) UniProt PMID:15946941 NCBI chrNW_004955404:343,009...353,683
Ensembl chrNW_004955404:343,009...353,683
JBrowse link
regulation of translation involved in cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpl26 ribosomal protein L26 involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chrNW_004955467:8,519,760...8,525,514
Ensembl chrNW_004955467:8,519,760...8,527,182
JBrowse link
rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnat1 G protein subunit alpha transducin 1 ISO RGD PMID:11931744 RGD:1599009 NCBI chrNW_004955532:2,018,850...2,023,603
Ensembl chrNW_004955532:2,018,850...2,023,603
JBrowse link
G Opn4 opsin 4 acts_upstream_of_or_within ISO (MGI:4438311|PMID:19793992) MGI PMID:19793992 MGI:4438311 NCBI chrNW_004955510:5,723,804...5,736,070
Ensembl chrNW_004955510:5,724,120...5,736,135
JBrowse link
G Pcp2 Purkinje cell protein 2 acts_upstream_of_or_within ISO (MGI:3817370|PMID:18768681) MGI PMID:18768681 MGI:3817370 NCBI chrNW_004955563:1,625,249...1,628,776
Ensembl chrNW_004955563:1,625,254...1,628,776
JBrowse link
G Rho rhodopsin ISO RGD PMID:8814134 RGD:6893595 NCBI chrNW_004955429:17,787,337...17,791,982
Ensembl chrNW_004955429:17,787,337...17,791,982
JBrowse link
UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr5 actin related protein 5 involved_in ISO (PMID:20855601) UniProt PMID:20855601 NCBI chrNW_004955445:17,991,969...18,024,525
Ensembl chrNW_004955445:17,991,969...18,024,818
JBrowse link
G Cul4b cullin 4B involved_in ISO (PMID:22334663) UniProt PMID:22334663 NCBI chrNW_004955572:1,308,491...1,365,147 JBrowse link
G Ddb1 damage specific DNA binding protein 1 involved_in ISO (PMID:14751237), (PMID:22334663) UniProt PMID:14751237 PMID:22334663 NCBI chrNW_004955511:6,209,777...6,233,594
Ensembl chrNW_004955511:6,209,777...6,233,594
JBrowse link
G Ddb2 damage specific DNA binding protein 2 involved_in ISO (PMID:14751237), (PMID:22334663) UniProt PMID:14751237 PMID:22334663 NCBI chrNW_004955422:961,602...977,066
Ensembl chrNW_004955422:961,893...974,338
JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:20855601) UniProt PMID:20855601 NCBI chrNW_004955416:7,870,521...8,020,862
Ensembl chrNW_004955416:7,870,258...7,961,812
JBrowse link
G LOC102022141 histone H2A type 1-D involved_in ISO (PMID:22334663) UniProt PMID:22334663 NCBI chrNW_004955581:93,494...100,249 JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:20670893) CACAO PMID:20670893 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor involved_in ISO (PMID:8077226)
(MGI:5427285|PMID:22431748)
CACAO
MGI
PMID:8077226 PMID:22431748 MGI:5427285 NCBI chrNW_004955429:16,935,901...16,968,285
Ensembl chrNW_004955429:16,935,901...16,955,845
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12290
    response to stimulus 6666
      response to abiotic stimulus 1384
        response to radiation 508
          response to light stimulus 338
            cellular response to light stimulus 112
              cellular response to UV + 94
              cellular response to blue light + 0
              cellular response to light intensity + 5
              cellular response to red or far red light + 1
              rhodopsin mediated signaling pathway + 7
Path 2
Term Annotations click to browse term
  biological_process 12290
    cellular process 11254
      cellular response to stimulus 5326
        cellular response to environmental stimulus 381
          cellular response to abiotic stimulus 381
            cellular response to radiation 185
              cellular response to light stimulus 112
                cellular response to UV + 94
                cellular response to blue light + 0
                cellular response to light intensity + 5
                cellular response to red or far red light + 1
                rhodopsin mediated signaling pathway + 7
paths to the root