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ONTOLOGY REPORT - ANNOTATIONS

Term:cellular response to ionizing radiation
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Accession:GO:0071479 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays.
Synonyms:exact_synonym: cellular response to ionising radiation;   cellular response to ionizing radiation stimulus


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cellular response to ionizing radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase ISO RGD PMID:28007901 RGD:12879399 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041 		JBrowse link
G BABAM2 BRISC and BRCA1 A complex member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:27,884,907...28,338,302
Ensembl chr2A:27,974,917...28,420,519 		JBrowse link
G BARD1 BRCA1 associated RING domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:101,984,287...102,068,523
Ensembl chr2B:220,456,972...220,541,145 		JBrowse link
G BBC3 BCL2 binding component 3 acts_upstream_of_or_within ISO (PMID:16286009) MGI PMID:16286009 NCBI chr19:44,203,517...44,215,860 JBrowse link
G BLM BLM RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:69,407,248...69,508,070
Ensembl chr15:88,607,157...88,707,864 		JBrowse link
G BRCA1 BRCA1 DNA repair associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,197,946...14,279,064
Ensembl chr17:14,428,526...14,506,815 		JBrowse link
G BRCA2 BRCA2 DNA repair associated involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:13,574,422...13,658,967
Ensembl chr13:32,010,066...32,091,332 		JBrowse link
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:144,550,320...144,592,795
Ensembl chr  X:154,389,283...154,428,669 		JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:36,241,405...36,250,032
Ensembl chr 6:37,436,990...37,445,599 		JBrowse link
G CLOCK clock circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:68,391,310...68,509,813
Ensembl chr 4:75,018,898...75,066,726 		JBrowse link
G ECT2 epithelial cell transforming 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:169,756,885...169,828,087
Ensembl chr 3:177,938,164...178,008,381 		JBrowse link
G EEF1D eukaryotic translation elongation factor 1 delta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:140,333,100...140,350,955
Ensembl chr 8:143,340,928...143,362,971 		JBrowse link
G FBXO4 F-box protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21911473) Ensembl
MGI		 PMID:21911473 GO_REF:0000107 NCBI chr 5:68,336,673...68,474,481
Ensembl chr 5:73,500,850...73,517,051 		JBrowse link
G FIGNL1 fidgetin like 1 involved_in ISO (PMID:23754376) UniProt PMID:23754376 NCBI chr 7:51,080,052...51,093,694 JBrowse link
G GADD45A growth arrest and DNA damage inducible alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:66,925,063...66,928,222
Ensembl chr 1:68,880,912...68,884,188 		JBrowse link
G GRB2 growth factor receptor bound protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:69,265,307...69,352,835
Ensembl chr17:74,817,471...74,903,796 		JBrowse link
G HUS1 HUS1 checkpoint clamp component involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:48,606,848...48,622,194
Ensembl chr 7:48,714,668...48,731,005 		JBrowse link
G IFI16 interferon gamma inducible protein 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:134,364,706...134,405,910
Ensembl chr 1:138,152,328...138,203,424 		JBrowse link
G INO80 INO80 complex ATPase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:19,920,980...20,058,117
Ensembl chr15:38,170,982...38,307,311 		JBrowse link
G INTS7 integrator complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:187,508,066...187,603,567
Ensembl chr 1:192,372,016...192,466,510 		JBrowse link
G ITGB1 integrin subunit beta 1 ISO RGD PMID:19714308 RGD:2312872 NCBI chr10:33,023,573...33,081,384
Ensembl chr10:33,608,978...33,644,031 		JBrowse link
G ITGB6 integrin subunit beta 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17916808) Ensembl
MGI		 PMID:17916808 GO_REF:0000107 NCBI chr2B:47,386,913...47,496,491
Ensembl chr2B:164,764,251...164,867,426 		JBrowse link
G KDM4D lysine demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) MGI PMID:24550317 NCBI chr11:89,987,537...90,013,421 JBrowse link
G LIG4 DNA ligase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:89,336,434...89,347,418
Ensembl chr13:108,475,820...108,478,555 		JBrowse link
G LOC100977427 large ribosomal subunit protein uL24 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:56,616,749...56,617,299
Ensembl chr17:48,009,198...48,015,977 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:35,586,847...35,683,041
Ensembl chr 6:36,788,233...36,871,114 		JBrowse link
G MFN2 mitofusin 2 ISO RGD PMID:26415228 RGD:13204741 NCBI chr 1:10,729,933...10,764,865
Ensembl chr 1:11,945,880...11,981,077 		JBrowse link
G MGMT O-6-methylguanine-DNA methyltransferase ISO RGD PMID:9780001 RGD:2316946 NCBI chr10:126,059,701...126,365,850
Ensembl chr10:130,305,485...130,609,422 		JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase ISO RGD PMID:27681750 RGD:13781886 NCBI chr 7:98,227,071...98,262,254
Ensembl chr 7:110,952,876...110,981,967 		JBrowse link
G NET1 neuroepithelial cell transforming 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:5,457,920...5,503,223
Ensembl chr10:5,444,127...5,489,509 		JBrowse link
G RAD1 RAD1 checkpoint DNA exonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:75,452,153...75,465,022
Ensembl chr 5:80,732,954...80,744,448 		JBrowse link
G RAD51 RAD51 recombinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:19,638,310...19,672,474
Ensembl chr15:37,891,056...37,925,207 		JBrowse link
G RAD51AP1 RAD51 associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:4,657,972...4,679,232
Ensembl chr12:4,578,621...4,599,879 		JBrowse link
G RAD9A RAD9 checkpoint clamp component A involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:62,675,480...62,756,886
Ensembl chr11:66,061,208...66,068,214 		JBrowse link
G RAD9B RAD9 checkpoint clamp component B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:108,072,061...108,103,338
Ensembl chr12:111,467,845...111,498,350 		JBrowse link
G RHNO1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr12:2,999,089...3,011,911
Ensembl chr12:2,930,957...2,943,419 		JBrowse link
G RHOB ras homolog family member B involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:20,433,576...20,435,986
Ensembl chr2A:20,549,254...20,549,844 		JBrowse link
G RPL26 ribosomal protein L26 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:43,274,839...43,282,606
Ensembl chr17:48,009,198...48,015,977 		JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069 		JBrowse link
G SNAI2 snail family transcriptional repressor 2 acts_upstream_of_or_within ISO (PMID:16286009) MGI PMID:16286009 NCBI chr 8:45,341,857...45,345,544
Ensembl chr 8:42,723,971...42,730,904 		JBrowse link
G SPIDR scaffold protein involved in DNA repair involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:43,691,454...44,166,259
Ensembl chr 8:41,083,964...41,558,170 		JBrowse link
G SWI5 SWI5 homologous recombination repair protein involved_in ISO (PMID:23754376) UniProt PMID:23754376 NCBI chr 9:99,396,439...99,410,054
Ensembl chr 9:128,064,569...128,078,380 		JBrowse link
G TANK TRAF family member associated NFKB activator involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:48,426,036...48,525,265
Ensembl chr2B:165,820,833...165,896,438 		JBrowse link
G TGFB1 transforming growth factor beta 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17916808) RGD
MGI
Ensembl		 PMID:17916808 PMID:25600523 GO_REF:0000107 RGD:11073671 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973 		JBrowse link
G TNF tumor necrosis factor involved_in ISO (PMID:22836756) BHF-UCL PMID:22836756 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381 		JBrowse link
G TNKS1BP1 tankyrase 1 binding protein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:52,541,056...52,566,544
Ensembl chr 3:160,029,550...160,054,494 		JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16286009) Ensembl
MGI		 PMID:16286009 GO_REF:0000107 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
cellular response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041 		JBrowse link
G ATR ATR serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:139,482,606...139,612,274
Ensembl chr 3:147,075,185...147,196,261 		JBrowse link
G BCL2L1 BCL2 like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15231831) Ensembl
MGI		 PMID:15231831 GO_REF:0000107 NCBI chr20:27,955,688...28,015,950
Ensembl chr20:29,088,055...29,146,585 		JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10710310) Ensembl
MGI		 PMID:10710310 GO_REF:0000107 NCBI chr 6:36,241,405...36,250,032
Ensembl chr 6:37,436,990...37,445,599 		JBrowse link
G CHEK2 checkpoint kinase 2 acts_upstream_of_or_within ISO (PMID:10710310) MGI PMID:10710310 NCBI chr22:9,757,038...9,811,171 JBrowse link
G CRYAB crystallin alpha B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23542032) MGI
Ensembl		 PMID:23542032 GO_REF:0000107 NCBI chr11:106,795,406...106,800,019
Ensembl chr11:110,639,442...110,644,272 		JBrowse link
G DDIAS DNA damage induced apoptosis suppressor acts_upstream_of_or_within ISO (PMID:17515607) MGI PMID:17515607 NCBI chr11:77,967,057...77,999,829
Ensembl chr11:81,579,505...81,635,075 		JBrowse link
G EGR1 early growth response 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:133,845,305...133,849,291
Ensembl chr 5:139,975,635...139,979,260 		JBrowse link
G ELK1 ETS transcription factor ELK1 ISO RGD PMID:17949253 RGD:7488908 NCBI chr  X:40,071,433...40,086,518
Ensembl chr  X:47,967,492...47,982,579 		JBrowse link
G GTF2H5 general transcription factor IIH subunit 5 acts_upstream_of_or_within ISO (PMID:23637614) MGI PMID:23637614 Ensembl chr 6:158,126,665...158,153,663 JBrowse link
G HRAS HRas proto-oncogene, GTPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:537,488...540,810
Ensembl chr11:568,305...571,078 		JBrowse link
G HSF1 heat shock transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:141,055,310...141,078,360
Ensembl chr 8:144,062,137...144,067,866 		JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 ISO RGD PMID:20470193 RGD:11354917 NCBI chr 9:96,351,645...96,356,761
Ensembl chr 9:124,865,211...124,870,458 		JBrowse link
G KDM1A lysine demethylase 1A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24217620) MGI
Ensembl		 PMID:24217620 GO_REF:0000107 NCBI chr 1:22,205,624...22,269,571
Ensembl chr 1:23,153,066...23,217,692 		JBrowse link
G LOC100977427 large ribosomal subunit protein uL24 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:56,616,749...56,617,299
Ensembl chr17:48,009,198...48,015,977 		JBrowse link
G LOC100986914 cytochrome b-245 light chain ISO RGD PMID:18640264 RGD:2317861 NCBI chr16:69,356,396...69,364,225
Ensembl chr16:89,016,349...89,024,719 		JBrowse link
G LOC100994157 histone H2AX ISO RGD PMID:17552875 RGD:8693710 NCBI chr11:113,932,078...113,933,679 JBrowse link
G MAP3K20 mitogen-activated protein kinase kinase kinase 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:60,362,635...60,555,445
Ensembl chr2B:177,818,344...178,010,556 		JBrowse link
G MDM2 MDM2 proto-oncogene involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chr12:66,322,340...66,357,010
Ensembl chr12:69,102,084...69,133,278 		JBrowse link
G NOX4 NADPH oxidase 4 ISO RGD PMID:18640264 RGD:2317861 NCBI chr11:84,330,362...84,496,755 JBrowse link
G RAD51 RAD51 recombinase ISO RGD PMID:9885240 RGD:9831175 NCBI chr15:19,638,310...19,672,474
Ensembl chr15:37,891,056...37,925,207 		JBrowse link
G RNF4 ring finger protein 4 ISO RGD PMID:22661230 RGD:9480235 NCBI chr 4:2,614,918...2,661,785
Ensembl chr 4:2,540,612...2,563,937 		JBrowse link
G RPL13A ribosomal protein L13a ISO RGD PMID:10483362 RGD:11036101 NCBI chr19:46,485,729...46,504,928
Ensembl chr19:55,423,866...55,428,598 		JBrowse link
G RPL26 ribosomal protein L26 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:43,274,839...43,282,606
Ensembl chr17:48,009,198...48,015,977 		JBrowse link
G TLK2 tousled like kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:56,542,670...56,678,294
Ensembl chr17:61,689,998...61,830,394 		JBrowse link
G TMEM109 transmembrane protein 109 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23542032) MGI
TreeGrafter
Ensembl
InterPro		 PMID:23542032 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr11:56,177,335...56,186,645
Ensembl chr11:59,617,802...59,627,349 		JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10710310) Ensembl
MGI		 PMID:10710310 GO_REF:0000107 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
G TREX1 three prime repair exonuclease 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18045533) Ensembl
MGI		 PMID:18045533 GO_REF:0000107 NCBI chr 3:48,387,762...48,389,693
Ensembl chr 3:49,470,222...49,471,331 		JBrowse link
G TSPYL5 TSPY like 5 involved_in ISO (PMID:20079711) UniProt PMID:20079711 NCBI chr 8:93,573,775...93,918,775 JBrowse link
G WRN WRN RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:30,353,643...30,492,978
Ensembl chr 8:27,541,145...27,679,855 		JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:103,371,459...103,468,419
Ensembl chr2B:221,972,742...222,071,235 		JBrowse link
G XRCC6 X-ray repair cross complementing 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:22,516,281...22,557,379
Ensembl chr22:40,603,038...40,643,314 		JBrowse link
G YAP1 Yes1 associated transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:97,061,367...97,186,961
Ensembl chr11:100,552,424...100,681,301 		JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15980864) Ensembl
MGI		 PMID:15980864 GO_REF:0000107 NCBI chr 1:39,545,264...39,589,721
Ensembl chr 1:40,869,076...40,912,747 		JBrowse link
cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041 		JBrowse link
G CCND2 cyclin D2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23714078) Ensembl
MGI		 PMID:23714078 GO_REF:0000107 NCBI chr12:4,385,957...4,417,602
Ensembl chr12:4,309,272...4,335,551 		JBrowse link
G DBN1 drebrin 1 ISO RGD PMID:23578130 RGD:10398817 NCBI chr 5:172,758,316...172,774,974
Ensembl chr 5:179,820,791...179,836,872 		JBrowse link
G DNM2 dynamin 2 ISO RGD PMID:15994918 RGD:9685147 NCBI chr19:10,272,172...10,386,032
Ensembl chr19:10,933,672...11,106,478 		JBrowse link
G HAMP hepcidin antimicrobial peptide ISO RGD PMID:17090718 RGD:11041722 NCBI chr19:32,228,701...32,231,494
Ensembl chr19:40,964,445...40,968,861 		JBrowse link
G KAT5 lysine acetyltransferase 5 ISO RGD PMID:15985650 RGD:2316135 NCBI chr11:61,071,118...61,078,667
Ensembl chr11:64,404,572...64,412,667 		JBrowse link
G LCN2 lipocalin 2 ISO RGD PMID:23331620 RGD:126790570 NCBI chr 9:99,259,278...99,274,494
Ensembl chr 9:127,940,799...127,944,798 		JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:73,306,527...73,491,367
Ensembl chr 5:78,585,649...78,698,184 		JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:181,322,760...181,359,321
Ensembl chr 1:185,606,796...185,642,984 		JBrowse link
G PRAP1 proline rich acidic protein 1 involved_in ISO (MGI:6694360|PMID:32629119) UniProt PMID:32629119 MGI:6694360 Ensembl chr10:134,248,728...134,268,442 JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in ISO (MGI:4835111|PMID:19778523) UniProt PMID:19778523 MGI:4835111 NCBI chr 8:40,507,027...40,555,053 JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:146,123,075...146,131,543
Ensembl chr 4:157,944,733...157,953,258 		JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 ISO RGD PMID:21915754 RGD:9586753 NCBI chr15:22,364,696...22,472,499
Ensembl chr15:40,519,012...40,626,741 		JBrowse link
G XRCC5 X-ray repair cross complementing 5 ISO RGD PMID:11966321 RGD:727219 NCBI chr2B:103,371,459...103,468,419
Ensembl chr2B:221,972,742...222,071,235 		JBrowse link
G XRCC6 X-ray repair cross complementing 6 ISO RGD PMID:11175667 RGD:2317102 NCBI chr22:22,516,281...22,557,379
Ensembl chr22:40,603,038...40,643,314 		JBrowse link
regulation of cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GATA3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16440
    response to stimulus 8500
      response to abiotic stimulus 1474
        response to radiation 514
          response to ionizing radiation 191
            cellular response to ionizing radiation 88
              cellular response to X-ray + 16
              cellular response to gamma radiation + 34
Path 2
Term Annotations click to browse term
  biological_process 16440
    cellular process 15499
      cellular response to stimulus 7062
        cellular response to environmental stimulus 416
          cellular response to abiotic stimulus 416
            cellular response to radiation 196
              cellular response to ionizing radiation 88
                cellular response to X-ray + 16
                cellular response to gamma radiation + 34
paths to the root