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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to radiation
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Accession:GO:0071478 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation.
Comment:Note that 'radiation' refers to electromagnetic radiation of any wavelength.
Synonyms:exact_synonym: cellular response to electromagnetic radiation stimulus;   cellular response to radiation stimulus


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cellular response to radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsf1 heat shock transcription factor 1 ISO microwave RGD PMID:21241601 RGD:10403031 NCBI chrNW_004936470:7,927,734...7,950,805
Ensembl chrNW_004936470:7,928,095...7,933,337
JBrowse link
G Irs1 insulin receptor substrate 1 ISO RGD PMID:17427956 RGD:10045897 NCBI chrNW_004936525:9,064,442...9,125,972
Ensembl chrNW_004936525:9,064,466...9,122,635
JBrowse link
G Mtch2 mitochondrial carrier 2 acts_upstream_of_or_within ISO (MGI:5662300|PMID:26219591) MGI PMID:26219591 MGI:5662300 NCBI chrNW_004936562:1,622,341...1,644,191 JBrowse link
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:1,433,119...1,434,506
Ensembl chrNW_004936483:1,433,522...1,434,409
JBrowse link
adaptation of rhodopsin mediated signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rdh11 retinol dehydrogenase 11 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3584215|PMID:15790565) MGI
Ensembl
PMID:15790565 GO_REF:0000107 MGI:3584215 NCBI chrNW_004936495:11,065,946...11,082,104
Ensembl chrNW_004936495:11,066,660...11,082,044
JBrowse link
G Rs1 retinoschisin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3055638|PMID:15326152) MGI
Ensembl
PMID:15326152 GO_REF:0000107 MGI:3055638 NCBI chrNW_004936844:284,938...314,524
Ensembl chrNW_004936844:284,141...314,545
JBrowse link
cellular response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:359,134...534,672
Ensembl chrNW_004936551:359,362...532,211
JBrowse link
G Atr ATR serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936540:4,074,543...4,178,859
Ensembl chrNW_004936540:4,074,570...4,178,898
JBrowse link
G Bcl2l1 BCL2 like 1 acts_upstream_of_or_within ISO (MGI:3057092|PMID:15231831) MGI PMID:15231831 MGI:3057092 NCBI chrNW_004936485:18,654,046...18,707,324 JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1354114|PMID:10710310) MGI
Ensembl
PMID:10710310 GO_REF:0000107 MGI:1354114 NCBI chrNW_004936476:22,717,308...22,725,127
Ensembl chrNW_004936476:22,717,260...22,725,182
JBrowse link
G Chek2 checkpoint kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1354114|PMID:10710310) MGI
Ensembl
PMID:10710310 GO_REF:0000107 MGI:1354114 NCBI chrNW_004936657:2,805,947...2,848,180
Ensembl chrNW_004936657:2,805,959...2,848,180
JBrowse link
G Cryab crystallin alpha B acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23542032) MGI
Ensembl
PMID:23542032 GO_REF:0000107 NCBI chrNW_004936612:2,532,851...2,536,473
Ensembl chrNW_004936612:2,532,812...2,537,495
JBrowse link
G Ddias DNA damage induced apoptosis suppressor acts_upstream_of_or_within ISO (MGI:3718924|PMID:17515607) MGI PMID:17515607 MGI:3718924 NCBI chrNW_004936498:11,115,055...11,127,215
Ensembl chrNW_004936498:11,115,209...11,128,948
JBrowse link
G Egr1 early growth response 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:7,625,956...7,629,041
Ensembl chrNW_004936531:7,625,892...7,629,749
JBrowse link
G Elk1 ETS transcription factor ELK1 ISO RGD PMID:17949253 RGD:7488908 NCBI chrNW_004936502:13,402,726...13,418,214
Ensembl chrNW_004936502:13,402,728...13,418,214
JBrowse link
G Gtf2h5 general transcription factor IIH subunit 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5506835|PMID:23637614) MGI
Ensembl
PMID:23637614 GO_REF:0000107 MGI:5506835 NCBI chrNW_004936489:9,983,935...9,993,179
Ensembl chrNW_004936489:9,992,156...9,992,938
JBrowse link
G Hras HRas proto-oncogene, GTPase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936888:375,372...378,125
Ensembl chrNW_004936888:375,377...377,958
JBrowse link
G Hsf1 heat shock transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:7,927,734...7,950,805
Ensembl chrNW_004936470:7,928,095...7,933,337
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 ISO RGD PMID:20470193 RGD:11354917 NCBI chrNW_004936487:13,348,465...13,352,717
Ensembl chrNW_004936487:13,348,465...13,352,717
JBrowse link
G Kdm1a lysine demethylase 1A acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24217620) MGI
Ensembl
PMID:24217620 GO_REF:0000107 NCBI chrNW_004936474:8,262,913...8,319,089
Ensembl chrNW_004936474:8,262,885...8,319,092
JBrowse link
G LOC101966907 histone H2AX ISO RGD PMID:17552875 RGD:8693710 NCBI chrNW_004936542:4,046,930...4,049,017
Ensembl chrNW_004936542:4,047,915...4,048,346
JBrowse link
G LOC101967032 cytochrome b-245 light chain ISO RGD PMID:18640264 RGD:2317861 NCBI chrNW_004936641:1,036,967...1,044,954
Ensembl chrNW_004936641:1,036,967...1,044,991
JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:3,029,942...3,203,319 JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chrNW_004936545:6,709,903...6,732,334 JBrowse link
G Nox4 NADPH oxidase 4 ISO RGD PMID:18640264 RGD:2317861 NCBI chrNW_004936736:230,465...394,859
Ensembl chrNW_004936736:230,476...396,708
JBrowse link
G Rad51 RAD51 recombinase ISO RGD PMID:9885240 RGD:9831175 NCBI chrNW_004936471:4,119,020...4,136,811
Ensembl chrNW_004936471:4,114,530...4,136,248
JBrowse link
G Rnf4 ring finger protein 4 ISO RGD PMID:22661230 RGD:9480235 NCBI chrNW_004936477:21,025,040...21,055,821 JBrowse link
G Rpl13a ribosomal protein L13a ISO RGD PMID:10483362 RGD:11036101 NCBI chrNW_004936664:3,352,535...3,356,196
Ensembl chrNW_004936664:3,352,514...3,356,895
JBrowse link
G Rpl26 ribosomal protein L26 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,603,913...1,609,125
Ensembl chrNW_004936595:1,603,413...1,609,132
JBrowse link
G Tlk2 tousled like kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:3,303,563...3,422,093
Ensembl chrNW_004936541:3,302,872...3,423,058
JBrowse link
G Tmem109 transmembrane protein 109 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23542032) MGI
InterPro
Ensembl
PMID:23542032 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936581:2,009,357...2,019,381
Ensembl chrNW_004936581:2,009,162...2,019,426
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1354114|PMID:10710310) MGI
Ensembl
PMID:10710310 GO_REF:0000107 MGI:1354114 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3818783|PMID:18045533) MGI
Ensembl
PMID:18045533 GO_REF:0000107 MGI:3818783 NCBI chrNW_004936529:264,535...266,451
Ensembl chrNW_004936529:264,468...266,422
JBrowse link
G Tspyl5 TSPY like 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:45,385,155...45,410,307
Ensembl chrNW_004936470:45,385,239...45,386,486
JBrowse link
G Wrn WRN RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936792:862,659...1,005,065
Ensembl chrNW_004936792:862,383...1,005,755
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936586:1,055,478...1,137,924
Ensembl chrNW_004936586:1,055,335...1,137,984
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:303,843...325,812
Ensembl chrNW_004936492:300,057...325,845
JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:5,638,383...5,740,523
Ensembl chrNW_004936551:5,634,751...5,740,567
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3583382|PMID:15980864) MGI
Ensembl
PMID:15980864 GO_REF:0000107 MGI:3583382 NCBI chrNW_004936474:22,035,059...22,077,846
Ensembl chrNW_004936474:22,034,801...22,077,986
JBrowse link
cellular response to high light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt2 AKT serine/threonine kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3695811|PMID:17202487) MGI
Ensembl
PMID:17202487 GO_REF:0000107 MGI:3695811 NCBI chrNW_004936661:2,652,568...2,694,039
Ensembl chrNW_004936661:2,652,566...2,694,086
JBrowse link
G Slc24a4 solute carrier family 24 member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936733:515,546...639,699
Ensembl chrNW_004936733:515,510...639,705
JBrowse link
cellular response to ionizing radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Babam2 BRISC and BRCA1 A complex member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:4,375,393...4,863,050
Ensembl chrNW_004936493:4,375,393...4,768,399
JBrowse link
G Bard1 BRCA1 associated RING domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936586:2,200,211...2,272,781
Ensembl chrNW_004936586:2,200,205...2,273,307
JBrowse link
G Bbc3 BCL2 binding component 3 acts_upstream_of_or_within ISO (MGI:3690827|PMID:16286009) MGI PMID:16286009 MGI:3690827 NCBI chrNW_004936664:962,115...966,797 JBrowse link
G Blm BLM RecQ like helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:16,194,092...16,295,803
Ensembl chrNW_004936483:16,194,092...16,255,905
JBrowse link
G Brca1 BRCA1 DNA repair associated involved_in ISO (PMID:14636569) ComplexPortal PMID:14636569 NCBI chrNW_004936490:17,735,444...17,801,456 JBrowse link
G Brca2 BRCA2 DNA repair associated involved_in ISO (PMID:14636569) ComplexPortal PMID:14636569 NCBI chrNW_004936472:26,945,659...27,017,693 JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936927:341,114...380,817
Ensembl chrNW_004936927:341,253...376,700
JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:22,717,308...22,725,127
Ensembl chrNW_004936476:22,717,260...22,725,182
JBrowse link
G Clock clock circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:17,789,834...17,900,371
Ensembl chrNW_004936482:17,794,134...17,845,303
JBrowse link
G Ect2 epithelial cell transforming 2 involved_in ISO (PMID:21373644) UniProt PMID:21373644 NCBI chrNW_004936703:5,744...45,636 JBrowse link
G Eef1d eukaryotic translation elongation factor 1 delta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:8,538,899...8,553,645
Ensembl chrNW_004936470:8,538,821...8,553,970
JBrowse link
G Fbxo4 F-box protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5299398|PMID:21911473) MGI
Ensembl
PMID:21911473 GO_REF:0000107 MGI:5299398 NCBI chrNW_004936518:855,304...873,927
Ensembl chrNW_004936518:854,721...874,018
JBrowse link
G Fignl1 fidgetin like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936686:1,412,544...1,415,939
Ensembl chrNW_004936686:1,413,218...1,415,248
JBrowse link
G Gadd45a growth arrest and DNA damage inducible alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936591:3,998,359...4,001,491
Ensembl chrNW_004936591:3,998,340...4,001,830
JBrowse link
G Grb2 growth factor receptor bound protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:592,760...661,369
Ensembl chrNW_004936594:592,740...661,369
JBrowse link
G Hus1 HUS1 checkpoint clamp component involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:22,393,952...22,414,349
Ensembl chrNW_004936478:22,400,111...22,414,115
JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:4,374,802...4,478,894
Ensembl chrNW_004936471:4,375,395...4,478,899
JBrowse link
G Ints7 integrator complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:1,389,728...1,456,397
Ensembl chrNW_004936557:1,389,728...1,457,042
JBrowse link
G Itgb1 integrin subunit beta 1 ISO RGD PMID:19714308 RGD:2312872 NCBI chrNW_004936574:1,465,981...1,495,717
Ensembl chrNW_004936574:1,465,897...1,495,762
JBrowse link
G Itgb6 integrin subunit beta 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3842254|PMID:17916808) MGI
Ensembl
PMID:17916808 GO_REF:0000107 MGI:3842254 NCBI chrNW_004936469:18,581,855...18,650,109
Ensembl chrNW_004936469:18,581,840...18,650,123
JBrowse link
G KDM4D lysine demethylase 4D involved_in IEA Ensembl GO_REF:0000107 Ensembl chrNW_004936674:53,187...54,726 JBrowse link
G Lig4 DNA ligase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:3,861,833...3,867,943
Ensembl chrNW_004936472:3,861,866...3,867,933
JBrowse link
G LOC101967900 lysine-specific demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) MGI PMID:24550317 NCBI chrNW_004936674:53,200...73,042 JBrowse link
G Mapk14 mitogen-activated protein kinase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:23,237,762...23,310,211
Ensembl chrNW_004936476:23,237,277...23,310,232
JBrowse link
G Mfn2 mitofusin 2 ISO RGD PMID:26415228 RGD:13204741 NCBI chrNW_004936474:767,754...795,258
Ensembl chrNW_004936474:767,671...796,556
JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase ISO RGD PMID:9780001 RGD:2316946 NCBI chrNW_004936486:16,744,607...16,923,209
Ensembl chrNW_004936486:16,744,570...16,923,543
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase ISO RGD PMID:27681750 RGD:13781886 NCBI chrNW_004936479:17,682,070...17,716,713
Ensembl chrNW_004936479:17,682,201...17,716,661
JBrowse link
G Net1 neuroepithelial cell transforming 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:9,027,515...9,056,571
Ensembl chrNW_004936484:9,027,515...9,056,600
JBrowse link
G Rad1 RAD1 checkpoint DNA exonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:6,620,325...6,626,328
Ensembl chrNW_004936518:6,620,325...6,628,393
JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (PMID:23509288), (PMID:23754376)
(PMID:14636569)
UniProt
ComplexPortal
PMID:14636569 PMID:23509288 PMID:23754376 NCBI chrNW_004936471:4,119,020...4,136,811
Ensembl chrNW_004936471:4,114,530...4,136,248
JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO (PMID:23754376) UniProt PMID:23754376 NCBI chrNW_004936606:4,697,369...4,716,006 JBrowse link
G Rad9a RAD9 checkpoint clamp component A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,348,869...2,353,907
Ensembl chrNW_004936599:2,345,646...2,354,029
JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936606:3,201,540...3,208,019
Ensembl chrNW_004936606:3,201,504...3,208,342
JBrowse link
G Rhob ras homolog family member B involved_in ISO (PMID:21373644) UniProt PMID:21373644 NCBI chrNW_004936493:10,987,801...10,990,207 JBrowse link
G Rpl26 ribosomal protein L26 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,603,913...1,609,125
Ensembl chrNW_004936595:1,603,413...1,609,132
JBrowse link
G Sirt1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:10,296,097...10,316,673
Ensembl chrNW_004936521:10,296,097...10,322,215
JBrowse link
G Snai2 snail family transcriptional repressor 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3690827|PMID:16286009) MGI
Ensembl
PMID:16286009 GO_REF:0000107 MGI:3690827 NCBI chrNW_004936590:3,813,916...3,817,642
Ensembl chrNW_004936590:3,813,888...3,817,642
JBrowse link
G Spidr scaffold protein involved in DNA repair involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936590:4,921,755...5,041,573
Ensembl chrNW_004936590:4,921,542...5,316,195
JBrowse link
G Swi5 SWI5 homologous recombination repair protein involved_in ISO (PMID:23754376) UniProt PMID:23754376 NCBI chrNW_004936487:15,814,463...15,822,783
Ensembl chrNW_004936487:15,814,102...15,823,311
JBrowse link
G Tank TRAF family member associated NFKB activator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:17,665,604...17,754,845
Ensembl chrNW_004936469:17,665,593...17,742,422
JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:3842254|PMID:17916808) RGD
Ensembl
MGI
PMID:17916808 PMID:25600523 GO_REF:0000107 MGI:3842254 RGD:11073671 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272
JBrowse link
G Tnks1bp1 tankyrase 1 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:5,158,424...5,182,099
Ensembl chrNW_004936581:5,158,353...5,182,109
JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3690827|PMID:16286009) Ensembl
MGI
PMID:16286009 GO_REF:0000107 MGI:3690827 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
JBrowse link
cellular response to light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crb1 crumbs cell polarity complex component 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3696487|PMID:17234588) MGI
Ensembl
PMID:17234588 GO_REF:0000107 MGI:3696487 NCBI chrNW_004936567:6,347,661...6,559,731
Ensembl chrNW_004936567:6,366,489...6,559,766
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:17475674 RGD:9068879 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157
JBrowse link
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 ISO RGD PMID:24202060 RGD:12910722 NCBI chrNW_004936500:7,998,464...8,007,848
Ensembl chrNW_004936500:8,007,291...8,007,680
JBrowse link
G Opn5 opsin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:12,740,038...12,766,310
Ensembl chrNW_004936476:12,722,563...12,766,512
JBrowse link
G Rho rhodopsin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4849309|PMID:21052544) MGI
Ensembl
PMID:21052544 GO_REF:0000107 MGI:4849309 NCBI chrNW_004936602:896,730...901,480
Ensembl chrNW_004936602:894,617...901,664
JBrowse link
G Rp1 RP1 axonemal microtubule associated acts_upstream_of_or_within ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004936496:1,524,123...1,583,114 JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator acts_upstream_of_or_within ISO (MGI:1354839|PMID:10725384) MGI PMID:10725384 MGI:1354839 NCBI chrNW_004936502:5,163,164...5,212,940 JBrowse link
G Trpm1 transient receptor potential cation channel subfamily M member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4849309|PMID:21052544)
(MGI:4420740|PMID:19966281)
MGI
Ensembl
PMID:19966281 PMID:21052544 GO_REF:0000107 MGI:4420740 MGI:4849309 NCBI chrNW_004936483:723,784...856,839
Ensembl chrNW_004936483:724,018...858,855
JBrowse link
cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 (Colton blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:7,146,997...7,160,369
Ensembl chrNW_004936478:7,147,027...7,160,401
JBrowse link
G Atr ATR serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936540:4,074,543...4,178,859
Ensembl chrNW_004936540:4,074,570...4,178,898
JBrowse link
G Aurkb aurora kinase B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,435,601...1,437,423
Ensembl chrNW_004936595:1,435,852...1,440,351
JBrowse link
G Bak1 BCL2 antagonist/killer 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:25,347,608...25,354,772
Ensembl chrNW_004936476:25,347,545...25,355,789
JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3042308|PMID:14963330) MGI
Ensembl
PMID:14963330 GO_REF:0000107 MGI:3042308 NCBI chrNW_004936664:2,968,103...2,973,652
Ensembl chrNW_004936664:2,967,865...2,973,820
JBrowse link
G Bmf Bcl2 modifying factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:3,573,437...3,594,438
Ensembl chrNW_004936471:3,577,221...3,594,981
JBrowse link
G Casp9 caspase 9 involved_in ISO (PMID:15657060) UniProt PMID:15657060 NCBI chrNW_004936474:3,178,097...3,196,130 JBrowse link
G Cdc25a cell division cycle 25A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:1,657,411...1,680,109
Ensembl chrNW_004936596:1,659,159...1,678,788
JBrowse link
G Cops9 COP9 signalosome subunit 9 involved_in ISO (PMID:26456823) UniProt PMID:26456823 NCBI chrNW_004936745:1,291,702...1,295,834 JBrowse link
G Crebbp CREB binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936694:552,447...663,237
Ensembl chrNW_004936694:553,753...663,617
JBrowse link
G Cul4a cullin 4A involved_in ISO (PMID:22118460) ComplexPortal PMID:22118460 NCBI chrNW_004936472:409,083...432,442
Ensembl chrNW_004936472:408,659...432,379
JBrowse link
G Ddb1 damage specific DNA binding protein 1 involved_in ISO (PMID:22118460) ComplexPortal PMID:22118460 NCBI chrNW_004936581:1,710,382...1,742,598
Ensembl chrNW_004936581:1,710,382...1,742,598
JBrowse link
G Ddb2 damage specific DNA binding protein 2 involved_in ISO (PMID:22118460) ComplexPortal PMID:22118460 NCBI chrNW_004936562:1,960,406...1,974,809
Ensembl chrNW_004936562:1,960,406...1,974,867
JBrowse link
G Ddias DNA damage induced apoptosis suppressor acts_upstream_of_or_within ISO (MGI:3718924|PMID:17515607) MGI PMID:17515607 MGI:3718924 NCBI chrNW_004936498:11,115,055...11,127,215
Ensembl chrNW_004936498:11,115,209...11,128,948
JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936519:1,946,684...1,987,036
Ensembl chrNW_004936519:1,946,652...1,987,070
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:5700311|PMID:12176355) UniProt PMID:12176355 MGI:5700311 NCBI chrNW_004936471:3,423,792...3,527,089
Ensembl chrNW_004936471:3,423,813...3,526,913
JBrowse link
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:10,746,687...10,769,304
Ensembl chrNW_004936495:10,745,923...10,773,199
JBrowse link
G Ep300 E1A binding protein p300 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:696,982...778,132
Ensembl chrNW_004936492:696,960...778,138
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:2,301,072...2,329,346
Ensembl chrNW_004936501:2,300,835...2,329,351
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO (PMID:17873522) UniProt PMID:17873522 NCBI chrNW_004936689:2,261,163...2,449,951
Ensembl chrNW_004936689:2,259,477...2,344,764
JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:4,374,802...4,478,894
Ensembl chrNW_004936471:4,375,395...4,478,899
JBrowse link
G Kdm1a lysine demethylase 1A acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24217620) MGI
Ensembl
PMID:24217620 GO_REF:0000107 NCBI chrNW_004936474:8,262,913...8,319,089
Ensembl chrNW_004936474:8,262,885...8,319,092
JBrowse link
G Mapk13 mitogen-activated protein kinase 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:23,212,116...23,218,726
Ensembl chrNW_004936476:23,212,074...23,218,775
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 ISO RGD PMID:8875991 RGD:2304246 NCBI chrNW_004936739:551,678...602,027
Ensembl chrNW_004936739:551,629...602,047
JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936880:646,835...661,312
Ensembl chrNW_004936880:644,079...661,544
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:20,480,844...20,485,955
Ensembl chrNW_004936470:20,480,829...20,485,965
JBrowse link
G N4bp1 NEDD4 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:1,743,205...1,765,466
Ensembl chrNW_004936475:1,741,528...1,765,491
JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:17,254,777...17,374,725
Ensembl chrNW_004936471:17,252,234...17,374,804
JBrowse link
G Nfatc4 nuclear factor of activated T cells 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3709926|PMID:17242187) MGI
Ensembl
PMID:17242187 GO_REF:0000107 MGI:3709926 NCBI chrNW_004936722:178,866...187,847
Ensembl chrNW_004936722:179,200...187,800
JBrowse link
G Noc2l NOC2 like nucleolar associated transcriptional repressor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936737:2,087,123...2,098,153
Ensembl chrNW_004936737:2,087,158...2,098,156
JBrowse link
G Npm1 nucleophosmin 1 involved_in ISO (PMID:19160485) CAFA PMID:19160485 NCBI chrNW_004936609:3,712,628...3,725,635 JBrowse link
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:1,433,119...1,434,506
Ensembl chrNW_004936483:1,433,522...1,434,409
JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:3,102,468...3,147,601
Ensembl chrNW_004936526:3,102,039...3,147,642
JBrowse link
G Pbk PDZ binding kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5293269|PMID:21715333) MGI
Ensembl
PMID:21715333 GO_REF:0000107 MGI:5293269 NCBI chrNW_004936675:704,001...722,769
Ensembl chrNW_004936675:704,516...722,755
JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO (PMID:24939902) RGD
UniProt
PMID:8905661 PMID:24939902 RGD:10448977 NCBI chrNW_004936485:13,766,221...13,771,215 JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3709926|PMID:17242187) MGI
Ensembl
PMID:17242187 GO_REF:0000107 MGI:3709926 NCBI chrNW_004936480:1,188,408...1,273,210
Ensembl chrNW_004936480:1,188,183...1,273,537
JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936889:231,373...250,985
Ensembl chrNW_004936889:231,373...250,987
Ensembl chrNW_004936889:231,373...250,987
JBrowse link
G Polk DNA polymerase kappa involved_in ISO (PMID:28297716) UniProt PMID:28297716 NCBI chrNW_004936549:1,199,810...1,261,889 JBrowse link
G Ppp1r15a protein phosphatase 1 regulatory subunit 15A ISO RGD PMID:9811446 RGD:9999409 NCBI chrNW_004936664:2,910,609...2,914,205 JBrowse link
G Prkcd protein kinase C delta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:3,892,625...3,923,467
Ensembl chrNW_004936473:3,892,366...3,923,515
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:22306367 RGD:5688265 NCBI chrNW_004936481:3,821,564...3,828,086 JBrowse link
G Ptn pleiotrophin ISO RGD PMID:17925408 RGD:10044023 NCBI chrNW_004936592:1,706,979...1,806,345
Ensembl chrNW_004936592:1,707,693...1,730,617
JBrowse link
G Ptprk protein tyrosine phosphatase receptor type K involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936639:1,279,795...1,683,944
Ensembl chrNW_004936639:1,278,808...1,682,279
JBrowse link
G Rbx1 ring-box 1 involved_in ISO (PMID:22118460) ComplexPortal PMID:22118460 NCBI chrNW_004936492:872,316...890,860
Ensembl chrNW_004936492:873,576...890,835
JBrowse link
G Rhbdd1 rhomboid domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:8,906,848...9,028,792
Ensembl chrNW_004936525:8,906,631...9,004,372
JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:3,201,540...3,208,019
Ensembl chrNW_004936606:3,201,504...3,208,342
JBrowse link
G Rnf168 ring finger protein 168 acts_upstream_of_or_within ISO (MGI:5562615|PMID:24217620) MGI PMID:24217620 MGI:5562615 NCBI chrNW_004936784:1,073,236...1,094,575 JBrowse link
G Rpl26 ribosomal protein L26 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,603,913...1,609,125
Ensembl chrNW_004936595:1,603,413...1,609,132
JBrowse link
G Ruvbl2 RuvB like AAA ATPase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:2,995,212...3,010,563
Ensembl chrNW_004936664:2,995,213...3,010,853
JBrowse link
G Sde2 SDE2 telomere maintenance homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:2,763,243...2,779,506
Ensembl chrNW_004936526:2,760,639...2,779,657
JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936842:448,315...452,557
Ensembl chrNW_004936842:447,991...452,630
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:24289924) ParkinsonsUK-UCL PMID:24289924 NCBI chrNW_004936762:189,710...271,759 JBrowse link
G Tmem161a transmembrane protein 161A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:2,274,989...2,287,288
Ensembl chrNW_004936596:2,274,989...2,287,580
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3042308|PMID:14963330) MGI
Ensembl
PMID:14963330 GO_REF:0000107 MGI:3042308 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
JBrowse link
G Tp53inp1 tumor protein p53 inducible nuclear protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2153600|PMID:11557757) MGI
Ensembl
PMID:11557757 GO_REF:0000107 MGI:2153600 NCBI chrNW_004936544:7,882,710...7,891,668
Ensembl chrNW_004936544:7,881,102...7,891,463
JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5014018|PMID:20511593) MGI
Ensembl
PMID:20511593 GO_REF:0000107 MGI:5014018 NCBI chrNW_004936529:264,535...266,451
Ensembl chrNW_004936529:264,468...266,422
JBrowse link
G Triap1 TP53 regulated inhibitor of apoptosis 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936668:500,815...503,158
Ensembl chrNW_004936668:500,813...503,148
JBrowse link
G Usp28 ubiquitin specific peptidase 28 involved_in ISO (PMID:17873522) UniProt PMID:17873522 NCBI chrNW_004936612:742,777...804,919
Ensembl chrNW_004936612:742,725...804,921
JBrowse link
G Usp47 ubiquitin specific peptidase 47 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:6,483,898...6,596,136
Ensembl chrNW_004936528:6,481,507...6,595,771
JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:18026119) UniProt PMID:18026119 NCBI chrNW_004936604:3,911,407...3,945,405 JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO (PMID:24657165) UniProt PMID:24657165 NCBI chrNW_004936495:8,212,136...8,238,876 JBrowse link
cellular response to UV-A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cers1 ceramide synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:2,442,978...2,467,184
Ensembl chrNW_004936596:2,442,991...2,467,184
JBrowse link
G LOC101957150 stromelysin-1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:5,137,801...5,145,934
Ensembl chrNW_004936551:5,137,801...5,145,934
JBrowse link
G Mme membrane metalloendopeptidase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936519:2,513,896...2,595,896
Ensembl chrNW_004936519:2,513,704...2,595,971
JBrowse link
G Mmp1 matrix metallopeptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:5,167,909...5,175,149
Ensembl chrNW_004936551:5,168,044...5,174,857
JBrowse link
G Mmp2 matrix metallopeptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:7,801,356...7,825,831
Ensembl chrNW_004936475:7,801,277...7,825,851
JBrowse link
G Mmp9 matrix metallopeptidase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:7,038,240...7,045,873
Ensembl chrNW_004936514:7,037,639...7,045,793
JBrowse link
G Opn1sw opsin 1, short wave sensitive involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:15,696,063...15,702,311
Ensembl chrNW_004936479:15,699,604...15,702,352
JBrowse link
G Opn3 opsin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:8,833,495...8,876,631
Ensembl chrNW_004936526:8,833,455...8,876,729
JBrowse link
G Opn5 opsin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:12,740,038...12,766,310
Ensembl chrNW_004936476:12,722,563...12,766,512
JBrowse link
G Ppid peptidylprolyl isomerase D involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936576:5,165,815...5,179,928
Ensembl chrNW_004936576:5,161,914...5,179,961
JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936502:13,345,936...13,350,170
Ensembl chrNW_004936502:13,345,832...13,350,248
JBrowse link
cellular response to UV-B term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn1a cyclin dependent kinase inhibitor 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:22,717,308...22,725,127
Ensembl chrNW_004936476:22,717,260...22,725,182
JBrowse link
G Crip1 cysteine rich protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936621:101,046...102,660
Ensembl chrNW_004936621:101,046...102,664
JBrowse link
G Hyal1 hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:1,838,212...1,842,399
Ensembl chrNW_004936529:1,838,676...1,841,188
JBrowse link
G Hyal2 hyaluronidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:1,845,445...1,851,106
Ensembl chrNW_004936529:1,845,763...1,851,252
JBrowse link
G Hyal3 hyaluronidase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:1,831,639...1,837,314
Ensembl chrNW_004936529:1,831,254...1,837,314
JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:3,029,942...3,203,319 JBrowse link
G Mapk11 mitogen-activated protein kinase 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936629:542,143...549,861
Ensembl chrNW_004936629:545,755...549,837
JBrowse link
G Mapk14 mitogen-activated protein kinase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:23,237,762...23,310,211
Ensembl chrNW_004936476:23,237,277...23,310,232
JBrowse link
G Mfap4 microfibril associated protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936881:369,161...372,628
Ensembl chrNW_004936881:368,877...373,974
JBrowse link
G Mme membrane metalloendopeptidase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936519:2,513,896...2,595,896
Ensembl chrNW_004936519:2,513,704...2,595,971
JBrowse link
G Nlrp1 NLR family pyrin domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:2,248,153...2,290,802
Ensembl chrNW_004936677:2,248,903...2,289,151
JBrowse link
G Rpl13a ribosomal protein L13a ISO RGD PMID:10483362 RGD:11036101 NCBI chrNW_004936664:3,352,535...3,356,196
Ensembl chrNW_004936664:3,352,514...3,356,895
JBrowse link
G Rpl35 ribosomal protein L35 ISO RGD PMID:10483362 RGD:11036101 NCBI chrNW_004936487:13,056,243...13,060,900
Ensembl chrNW_004936487:13,053,507...13,061,147
JBrowse link
G Stk11 serine/threonine kinase 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:579,816...601,033
Ensembl chrNW_004936588:579,816...603,654
JBrowse link
cellular response to UV-C term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ei24 EI24 autophagy associated transmembrane protein acts_upstream_of_or_within ISO (MGI:5543725|PMID:24014029) MGI PMID:24014029 MGI:5543725 NCBI chrNW_004936743:1,957,948...1,970,885
Ensembl chrNW_004936743:1,958,829...1,969,540
JBrowse link
G Impact impact RWD domain protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936550:3,765,952...3,795,183
Ensembl chrNW_004936550:3,766,061...3,795,112
JBrowse link
G Mdm2 MDM2 proto-oncogene ISO RGD PMID:14558917 RGD:2317408 NCBI chrNW_004936545:6,709,903...6,732,334 JBrowse link
G Pierce1 piercer of microtubule wall 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4868626|PMID:21159655) MGI
Ensembl
PMID:21159655 GO_REF:0000107 MGI:4868626 NCBI chrNW_004936669:2,067,544...2,072,052
Ensembl chrNW_004936669:2,067,612...2,071,788
JBrowse link
G Polh DNA polymerase eta acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3695544|PMID:17114294) MGI
Ensembl
PMID:17114294 GO_REF:0000107 MGI:3695544 NCBI chrNW_004936476:16,400,026...16,434,538
Ensembl chrNW_004936476:16,401,517...16,429,287
JBrowse link
G Poli DNA polymerase iota acts_upstream_of_or_within ISO (MGI:3695544|PMID:17114294) MGI PMID:17114294 MGI:3695544 NCBI chrNW_004936497:9,490,048...9,512,475
Ensembl chrNW_004936497:9,487,917...9,512,436
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5543725|PMID:24014029) MGI
Ensembl
PMID:24014029 GO_REF:0000107 MGI:5543725 NCBI chrNW_004936595:919,807...935,367
Ensembl chrNW_004936595:919,428...925,425
JBrowse link
cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:359,134...534,672
Ensembl chrNW_004936551:359,362...532,211
JBrowse link
G Ccnd2 cyclin D2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5500853|PMID:23714078) MGI
Ensembl
PMID:23714078 GO_REF:0000107 MGI:5500853 NCBI chrNW_004936606:4,474,801...4,496,158
Ensembl chrNW_004936606:4,474,749...4,496,810
JBrowse link
G Dbn1 drebrin 1 ISO RGD PMID:23578130 RGD:10398817 NCBI chrNW_004936597:1,735,589...1,751,628
Ensembl chrNW_004936597:1,735,380...1,747,569
JBrowse link
G Dnm2 dynamin 2 ISO RGD PMID:15994918 RGD:9685147 NCBI chrNW_004936659:957,408...1,046,393
Ensembl chrNW_004936659:957,392...1,049,188
JBrowse link
G Hamp hepcidin antimicrobial peptide ISO RGD PMID:17090718 RGD:11041722 NCBI chrNW_004936570:1,009,344...1,010,654
Ensembl chrNW_004936570:1,009,312...1,010,686
JBrowse link
G Kat5 lysine acetyltransferase 5 ISO RGD PMID:15985650 RGD:2316135 NCBI chrNW_004936599:3,767,526...3,775,416
Ensembl chrNW_004936599:3,766,242...3,776,128
JBrowse link
G Lcn2 lipocalin 2 ISO RGD PMID:23331620 RGD:126790570 NCBI chrNW_004936487:15,721,752...15,725,396
Ensembl chrNW_004936487:15,721,684...15,728,221
JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:4,870,686...5,041,099
Ensembl chrNW_004936518:4,869,546...4,969,450
JBrowse link
G Nucks1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:6,713,065...6,728,011
Ensembl chrNW_004936557:6,713,095...6,722,808
JBrowse link
G Prap1 proline rich acidic protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:19,477,278...19,480,387
Ensembl chrNW_004936486:19,477,453...19,480,297
JBrowse link
G Sfrp1 secreted frizzled related protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936785:1,276,478...1,320,397
Ensembl chrNW_004936785:1,276,420...1,321,017
JBrowse link
G Sfrp2 secreted frizzled related protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936576:604,174...612,440
Ensembl chrNW_004936576:604,069...613,021
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 ISO RGD PMID:21915754 RGD:9586753 NCBI chrNW_004936471:6,589,395...6,668,242
Ensembl chrNW_004936471:6,589,564...6,668,305
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 ISO RGD PMID:11966321 RGD:727219 NCBI chrNW_004936586:1,055,478...1,137,924
Ensembl chrNW_004936586:1,055,335...1,137,984
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 ISO RGD PMID:11175667 RGD:2317102 NCBI chrNW_004936492:303,843...325,812
Ensembl chrNW_004936492:300,057...325,845
JBrowse link
dark adaptation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnb5 G protein subunit beta 5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5507748|PMID:23555598) MGI
Ensembl
PMID:23555598 GO_REF:0000107 MGI:5507748 NCBI chrNW_004936471:13,952,462...14,001,663
Ensembl chrNW_004936471:13,955,991...13,997,073
JBrowse link
G Rgs9 regulator of G protein signaling 9 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5507748|PMID:23555598) MGI
Ensembl
PMID:23555598 GO_REF:0000107 MGI:5507748 NCBI chrNW_004936541:7,472,195...7,525,220
Ensembl chrNW_004936541:7,458,539...7,525,220
JBrowse link
G Tent2 terminal nucleotidyltransferase 2 ISO RGD PMID:23700402 RGD:11041783 NCBI chrNW_004936549:7,401,532...7,465,264
Ensembl chrNW_004936549:7,408,563...7,463,895
JBrowse link
DNA synthesis involved in UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pola1 DNA polymerase alpha 1, catalytic subunit NOT|involved_in ISO (PMID:1730053) UniProt PMID:1730053 NCBI chrNW_004936836:1,151...287,438 JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5562498|PMID:23993650) MGI
Ensembl
PMID:23993650 GO_REF:0000107 MGI:5562498 NCBI chrNW_004936529:264,535...266,451
Ensembl chrNW_004936529:264,468...266,422
JBrowse link
negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nedd4 NEDD4 E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:17,254,777...17,374,725
Ensembl chrNW_004936471:17,252,234...17,374,804
JBrowse link
phototransduction, UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Opn5 opsin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:12,740,038...12,766,310
Ensembl chrNW_004936476:12,722,563...12,766,512
JBrowse link
positive regulation of cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmga2 high mobility group AT-hook 2 involved_in ISO (PMID:16061642) UniProt PMID:16061642 NCBI chrNW_004936545:3,944,419...3,958,289
Ensembl chrNW_004936545:3,944,419...4,064,193
JBrowse link
red, far-red light phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rho rhodopsin ISO RGD PMID:2525480 RGD:6893558 NCBI chrNW_004936602:896,730...901,480
Ensembl chrNW_004936602:894,617...901,664
JBrowse link
regulation of cellular response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase ISO RGD PMID:28007901 RGD:12879399 NCBI chrNW_004936551:359,134...534,672
Ensembl chrNW_004936551:359,362...532,211
JBrowse link
regulation of cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:6,780,692...6,800,883
Ensembl chrNW_004936484:6,780,692...6,800,966
JBrowse link
regulation of mRNA stability involved in cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Npm1 nucleophosmin 1 involved_in ISO (PMID:12080348) UniProt PMID:12080348 NCBI chrNW_004936609:3,712,628...3,725,635 JBrowse link
regulation of rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor interacting protein like 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3054134|PMID:15365178)
(MGI:3054118|PMID:15365173)
MGI
Ensembl
PMID:15365173 PMID:15365178 GO_REF:0000107 MGI:3054118 MGI:3054134 NCBI chrNW_004936677:1,539,502...1,548,343
Ensembl chrNW_004936677:1,538,874...1,548,010
JBrowse link
G Grk1 G protein-coupled receptor kinase 1 involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936472:152,202...165,134
Ensembl chrNW_004936472:151,854...165,281
JBrowse link
regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chek1 checkpoint kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936743:2,004,535...2,027,287
Ensembl chrNW_004936743:2,005,851...2,026,587
JBrowse link
regulation of translation involved in cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpl26 ribosomal protein L26 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:1,603,913...1,609,125
Ensembl chrNW_004936595:1,603,413...1,609,132
JBrowse link
rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnat1 G protein subunit alpha transducin 1 ISO RGD PMID:11931744 RGD:1599009 NCBI chrNW_004936529:1,735,258...1,740,297
Ensembl chrNW_004936529:1,735,440...1,742,567
JBrowse link
G Opn4 opsin 4 acts_upstream_of_or_within ISO (MGI:4438311|PMID:19793992) MGI PMID:19793992 MGI:4438311 NCBI chrNW_004936804:261,210...272,449
Ensembl chrNW_004936804:263,720...272,132
JBrowse link
G Pcp2 Purkinje cell protein 2 acts_upstream_of_or_within ISO (MGI:3817370|PMID:18768681) MGI PMID:18768681 MGI:3817370 NCBI chrNW_004936588:4,681,559...4,683,443
Ensembl chrNW_004936588:4,680,060...4,683,381
JBrowse link
G Rho rhodopsin ISO RGD PMID:8814134 RGD:6893595 NCBI chrNW_004936602:896,730...901,480
Ensembl chrNW_004936602:894,617...901,664
JBrowse link
UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr5 actin related protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:2,676,515...2,701,447
Ensembl chrNW_004936561:2,676,498...2,701,507
JBrowse link
G Cul4b cullin 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:9,490,717...9,535,998
Ensembl chrNW_004936479:9,479,133...9,534,262
JBrowse link
G Ddb1 damage specific DNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:1,710,382...1,742,598
Ensembl chrNW_004936581:1,710,382...1,742,598
JBrowse link
G Ddb2 damage specific DNA binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:1,960,406...1,974,809
Ensembl chrNW_004936562:1,960,406...1,974,867
JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:4,374,802...4,478,894
Ensembl chrNW_004936471:4,375,395...4,478,899
JBrowse link
G LOC101961805 histone H2A type 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937135:43,069...44,926
Ensembl chrNW_004937135:44,456...44,848
JBrowse link
G Mc1r melanocortin 1 receptor involved_in ISO (PMID:18292087) BHF-UCL PMID:18292087 NCBI chrNW_004936641:193,885...198,730 JBrowse link
G Sirt1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:10,296,097...10,316,673
Ensembl chrNW_004936521:10,296,097...10,322,215
JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936602:118,173...139,884
Ensembl chrNW_004936602:118,188...139,675
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15022
    response to stimulus 8054
      response to abiotic stimulus 1423
        response to radiation 533
          cellular response to radiation 192
            cellular response to ionizing radiation + 86
            cellular response to light stimulus + 118
Path 2
Term Annotations click to browse term
  biological_process 15022
    cellular process 14055
      cellular response to stimulus 6710
        cellular response to environmental stimulus 389
          cellular response to abiotic stimulus 389
            cellular response to radiation 192
              cellular response to ionizing radiation + 86
              cellular response to light stimulus + 118
paths to the root