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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to radiation
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Accession:GO:0071478 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an electromagnetic radiation stimulus. Electromagnetic radiation is a propagating wave in space with electric and magnetic components. These components oscillate at right angles to each other and to the direction of propagation.
Comment:Note that 'radiation' refers to electromagnetic radiation of any wavelength.
Synonyms:exact_synonym: cellular response to electromagnetic radiation stimulus;   cellular response to radiation stimulus



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cellular response to radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsf1 heat shock factor 1 involved_in ISO microwave RGD
MGI
PMID:21241601 GO_REF:0000096 MGI:4417868 RGD:10403031 NCBI chr15:76,361,562...76,385,355
Ensembl chr15:76,361,622...76,386,113
JBrowse link
G Irs1 insulin receptor substrate 1 ISO RGD PMID:17427956 RGD:10045897 NCBI chr 1:82,210,826...82,269,160
Ensembl chr 1:82,210,833...82,213,654
Ensembl chr 1:82,210,833...82,213,654
JBrowse link
G Mtch2 mitochondrial carrier 2 acts_upstream_of_or_within IMP (MGI:5662300|PMID:26219591) MGI PMID:26219591 MGI:5662300 NCBI chr 2:90,677,434...90,697,154
Ensembl chr 2:90,677,499...90,697,154
JBrowse link
G Nscme3l NSE3 homolog, SMC5-SMC6 complex component like involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr19:5,552,795...5,553,815
Ensembl chr19:5,552,795...5,553,815
JBrowse link
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:64,521,430...64,522,788
Ensembl chr 7:64,516,800...64,522,745
JBrowse link
adaptation of rhodopsin mediated signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rdh11 retinol dehydrogenase 11 acts_upstream_of_or_within IMP (MGI:3584215|PMID:15790565) MGI PMID:15790565 MGI:3584215 NCBI chr12:79,221,007...79,238,629
Ensembl chr12:79,221,111...79,239,067
JBrowse link
G Rs1 retinoschisis (X-linked, juvenile) 1 (human) acts_upstream_of_or_within IMP (MGI:3055638|PMID:15326152) MGI PMID:15326152 MGI:3055638 NCBI chr  X:159,548,815...159,584,800
Ensembl chr  X:159,551,009...159,582,659
JBrowse link
cellular response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ataxia telangiectasia mutated involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:53,348,422...53,448,125
Ensembl chr 9:53,350,449...53,448,040
JBrowse link
G Atr ataxia telangiectasia and Rad3 related involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:95,739,650...95,834,813
Ensembl chr 9:95,739,650...95,833,834
JBrowse link
G Bcl2l1 BCL2-like 1 acts_upstream_of_or_within IMP (MGI:3057092|PMID:15231831) MGI PMID:15231831 MGI:3057092 NCBI chr 2:152,600,652...152,675,723
Ensembl chr 2:152,622,588...152,673,648
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A (P21) acts_upstream_of_or_within IDA (MGI:1354114|PMID:10710310) MGI PMID:10710310 MGI:1354114 NCBI chr17:29,309,953...29,319,696
Ensembl chr17:29,309,950...29,319,701
JBrowse link
G Chek2 checkpoint kinase 2 acts_upstream_of_or_within IMP (MGI:1354114|PMID:10710310) MGI PMID:10710310 MGI:1354114 NCBI chr 5:110,987,668...111,022,006
Ensembl chr 5:110,987,845...111,022,011
JBrowse link
G Cryab crystallin, alpha B acts_upstream_of_or_within ISO (MGI:5484703|PMID:23542032) MGI PMID:23542032 MGI:5484703 NCBI chr 9:50,657,251...50,667,936
Ensembl chr 9:50,662,625...50,667,936
JBrowse link
G Cyba cytochrome b-245, alpha polypeptide ISO RGD PMID:18640264 RGD:2317861 NCBI chr 8:123,151,510...123,159,679
Ensembl chr 8:123,151,515...123,159,669
JBrowse link
G Ddias DNA damage-induced apoptosis suppressor acts_upstream_of_or_within IMP (MGI:3718924|PMID:17515607) MGI PMID:17515607 MGI:3718924 NCBI chr 7:92,506,734...92,523,455
Ensembl chr 7:92,506,733...92,523,455
JBrowse link
G Egr1 early growth response 1 involved_in IMP (MGI:3830454|PMID:19057511) BHF-UCL PMID:19057511 MGI:3830454 NCBI chr18:34,994,260...34,998,009
Ensembl chr18:34,992,876...34,998,037
JBrowse link
G Elk1 ELK1, member of ETS oncogene family involved_in ISO RGD
MGI
PMID:17949253 GO_REF:0000096 MGI:4417868 RGD:7488908 NCBI chr  X:20,799,634...20,816,847
Ensembl chr  X:20,799,634...20,816,847
JBrowse link
G Gtf2h5 general transcription factor IIH, polypeptide 5 acts_upstream_of_or_within IMP (MGI:5506835|PMID:23637614) MGI PMID:23637614 MGI:5506835 NCBI chr17:6,130,103...6,135,763
Ensembl chr17:6,130,061...6,136,792
JBrowse link
G H2ax H2A.X variant histone involved_in ISO RGD
MGI
PMID:17552875 GO_REF:0000096 MGI:4417868 RGD:8693710 NCBI chr 9:44,246,012...44,247,374
Ensembl chr 9:44,245,991...44,247,374
JBrowse link
G Hras Harvey rat sarcoma virus oncogene involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:140,769,847...140,773,938
Ensembl chr 7:140,769,018...140,773,918
JBrowse link
G Hsf1 heat shock factor 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:76,361,562...76,385,355
Ensembl chr15:76,361,622...76,386,113
JBrowse link
G Hspa5 heat shock protein 5 ISO RGD PMID:20470193 RGD:11354917 NCBI chr 2:34,662,102...34,666,541
Ensembl chr 2:34,661,982...34,667,559
JBrowse link
G Kdm1a lysine (K)-specific demethylase 1A acts_upstream_of_or_within ISO (MGI:5562615|PMID:24217620) MGI PMID:24217620 MGI:5562615 NCBI chr 4:136,277,844...136,330,127
Ensembl chr 4:136,277,851...136,330,034
JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:72,115,970...72,272,954
Ensembl chr 2:72,115,981...72,272,954
JBrowse link
G Mdm2 transformed mouse 3T3 cell double minute 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:117,524,780...117,546,663
Ensembl chr10:117,524,780...117,546,663
JBrowse link
G Mir21a microRNA 21a involved_in ISO (PMID:19826040) BHF-UCL PMID:19826040 NCBI chr11:86,474,893...86,474,984
Ensembl chr11:86,474,893...86,474,984
JBrowse link
G Nox4 NADPH oxidase 4 ISO RGD PMID:18640264 RGD:2317861 NCBI chr 7:86,893,638...87,047,918
Ensembl chr 7:86,895,304...87,047,918
JBrowse link
G Rad51 RAD51 recombinase ISO RGD PMID:9885240 RGD:9831175 NCBI chr 2:118,943,295...118,966,554
Ensembl chr 2:118,943,274...118,977,926
JBrowse link
G Rnf4 ring finger protein 4 involved_in ISO RGD
MGI
PMID:22661230 GO_REF:0000096 MGI:4417868 RGD:9480235 NCBI chr 5:34,493,594...34,510,789
Ensembl chr 5:34,493,633...34,512,973
JBrowse link
G Rpl13a ribosomal protein L13A ISO RGD PMID:10483362 RGD:11036101 NCBI chr 7:44,774,987...44,778,169
Ensembl chr 7:44,774,982...44,778,185
JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:68,792,392...68,795,360
Ensembl chr11:68,792,409...68,797,815
JBrowse link
G Tlk2 tousled-like kinase 2 (Arabidopsis) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:105,066,869...105,174,785
Ensembl chr11:105,069,633...105,174,785
JBrowse link
G Tmem109 transmembrane protein 109 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:5484703|PMID:23542032)
(MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:21873635 PMID:23542032 MGI:5484703 MGI:6201960 NCBI chr19:10,848,021...10,859,107
Ensembl chr19:10,848,024...10,859,365
JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within IMP (MGI:3818783|PMID:18045533) MGI PMID:18045533 MGI:3818783 NCBI chr 9:108,887,000...108,888,791
Ensembl chr 9:108,887,001...108,888,802
JBrowse link
G Trp53 transformation related protein 53 acts_upstream_of_or_within
involved_in
IDA
ISO
(MGI:1354114|PMID:10710310) MGI PMID:10710310 GO_REF:0000096 MGI:1354114 MGI:4834177 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699
JBrowse link
G Tspyl5 testis-specific protein, Y-encoded-like 5 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:33,684,021...33,688,029
Ensembl chr15:33,684,021...33,688,030
JBrowse link
G Wrn Werner syndrome RecQ like helicase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:33,724,400...33,875,591
Ensembl chr 8:33,724,412...33,875,555
JBrowse link
G Xrcc5 X-ray repair complementing defective repair in Chinese hamster cells 5 involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 1:72,346,576...72,434,112
Ensembl chr 1:72,346,586...72,434,111
JBrowse link
G Xrcc6 X-ray repair complementing defective repair in Chinese hamster cells 6 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr15:81,868,805...81,924,286
Ensembl chr15:81,872,036...81,924,286
JBrowse link
G Yap1 yes-associated protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:7,932,000...8,004,890
Ensembl chr 9:7,932,000...8,004,597
JBrowse link
G Zmpste24 zinc metallopeptidase, STE24 acts_upstream_of_or_within IMP (MGI:3583382|PMID:15980864) MGI PMID:15980864 MGI:3583382 NCBI chr 4:120,916,434...120,955,452
Ensembl chr 4:120,916,434...120,955,438
JBrowse link
cellular response to high light intensity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt2 thymoma viral proto-oncogene 2 acts_upstream_of_or_within IMP (MGI:3695811|PMID:17202487) MGI PMID:17202487 MGI:3695811 NCBI chr 7:27,290,977...27,340,251
Ensembl chr 7:27,290,977...27,340,251
JBrowse link
G Slc24a4 solute carrier family 24 (sodium/potassium/calcium exchanger), member 4 involved_in IMP (MGI:6116933|PMID:28650316) ARUK-UCL PMID:28650316 MGI:6116933 NCBI chr12:102,094,986...102,233,392
Ensembl chr12:102,094,992...102,233,350
JBrowse link
cellular response to ionizing radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Babam2 BRISC and BRCA1 A complex member 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:31,855,394...32,242,083
Ensembl chr 5:31,855,028...32,242,306
JBrowse link
G Bard1 BRCA1 associated RING domain 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:71,066,690...71,142,300
Ensembl chr 1:71,066,657...71,142,305
JBrowse link
G Bbc3 BCL2 binding component 3 acts_upstream_of_or_within IGI (MGI:3690827|PMID:16286009) MGI PMID:16286009 MGI:3690827 NCBI chr 7:16,042,307...16,052,259
Ensembl chr 7:16,042,318...16,052,130
JBrowse link
G Blm Bloom syndrome, RecQ like helicase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:80,104,741...80,184,896
Ensembl chr 7:80,104,481...80,184,867
JBrowse link
G Brca1 breast cancer 1, early onset involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:101,379,587...101,442,808
Ensembl chr11:101,379,590...101,442,781
JBrowse link
G Brca2 breast cancer 2, early onset involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:150,445,759...150,493,612
Ensembl chr 5:150,446,095...150,493,794
JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex, subunit 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:74,460,234...74,499,307
Ensembl chr  X:74,460,234...74,497,607
JBrowse link
G Brcc3dc BRCA1/BRCA2-containing complex, subunit 3, domain containing involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:108,534,905...108,536,021
Ensembl chr10:108,534,625...108,536,021
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A (P21) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:29,309,953...29,319,696
Ensembl chr17:29,309,950...29,319,701
JBrowse link
G Clock circadian locomotor output cycles kaput involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:76,357,715...76,452,675
Ensembl chr 5:76,357,715...76,452,639
JBrowse link
G Ect2 ect2 oncogene involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:27,151,371...27,208,402
Ensembl chr 3:27,151,371...27,208,027
JBrowse link
G Eef1d eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:75,766,645...75,781,430
Ensembl chr15:75,766,054...75,781,405
JBrowse link
G Fbxo4 F-box protein 4 acts_upstream_of_or_within IDA (MGI:5299398|PMID:21911473) MGI PMID:21911473 MGI:5299398 NCBI chr15:3,993,046...4,009,055
Ensembl chr15:3,994,927...4,009,055
JBrowse link
G Fignl1 fidgetin-like 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:11,750,288...11,758,983
Ensembl chr11:11,737,431...11,758,962
JBrowse link
G Gadd45a growth arrest and DNA-damage-inducible 45 alpha involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:67,012,080...67,014,391
Ensembl chr 6:67,012,080...67,014,441
JBrowse link
G Grb2 growth factor receptor bound protein 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:115,534,871...115,599,423
Ensembl chr11:115,534,871...115,599,423
JBrowse link
G Hus1 HUS1 checkpoint clamp component involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:8,943,137...8,961,240
Ensembl chr11:8,943,137...8,961,191
JBrowse link
G Ifi203 interferon activated gene 203 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:173,747,966...173,770,432
Ensembl chr 1:173,747,973...173,770,238
JBrowse link
G Ifi204 interferon activated gene 204 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:173,574,859...173,594,606
Ensembl chr 1:173,574,859...173,594,509
JBrowse link
G Ifi205 interferon activated gene 205 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:173,839,549...173,859,617
Ensembl chr 1:173,839,564...173,859,376
JBrowse link
G Ifi206 interferon activated gene 206 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:173,296,051...173,318,884
Ensembl chr 1:173,296,051...173,318,607
JBrowse link
G Ifi207 interferon activated gene 207 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:173,550,993...173,569,394
Ensembl chr 1:173,550,993...173,569,313
JBrowse link
G Ifi208 interferon activated gene 208 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:173,501,194...173,525,959
Ensembl chr 1:173,501,241...173,525,961
JBrowse link
G Ifi209 interferon activated gene 209 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:173,458,425...173,475,494
Ensembl chr 1:173,458,483...173,475,494
JBrowse link
G Ifi211 interferon activated gene 211 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:173,723,907...173,740,650
Ensembl chr 1:173,723,911...173,740,612
JBrowse link
G Ifi213 interferon activated gene 213 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:173,393,849...173,426,868
Ensembl chr 1:173,393,849...173,426,840
JBrowse link
G Ifi214 interferon activated gene 214 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:173,348,877...173,363,523
Ensembl chr 1:173,347,283...173,363,523
JBrowse link
G Ino80 INO80 complex subunit involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:119,203,523...119,308,168
Ensembl chr 2:119,203,523...119,308,168
JBrowse link
G Ints7 integrator complex subunit 7 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:191,307,652...191,355,802
Ensembl chr 1:191,307,748...191,355,800
JBrowse link
G Itgb1 integrin beta 1 (fibronectin receptor beta) ISO RGD PMID:19714308 RGD:2312872 NCBI chr 8:129,412,135...129,460,060
Ensembl chr 8:129,412,135...129,459,681
JBrowse link
G Itgb6 integrin beta 6 acts_upstream_of_or_within IDA (MGI:3842254|PMID:17916808) MGI PMID:17916808 MGI:3842254 NCBI chr 2:60,428,636...60,553,005
Ensembl chr 2:60,428,636...60,552,987
JBrowse link
G Kdm4d lysine (K)-specific demethylase 4D acts_upstream_of_or_within ISO (MGI:5552986|PMID:24550317) MGI PMID:24550317 MGI:5552986 NCBI chr 9:14,373,844...14,411,818
Ensembl chr 9:14,373,844...14,411,778
JBrowse link
G Lig4 ligase IV, DNA, ATP-dependent involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:10,020,020...10,027,680
Ensembl chr 8:10,019,049...10,027,686
JBrowse link
G Mapk14 mitogen-activated protein kinase 14 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:28,910,243...28,967,379
Ensembl chr17:28,910,303...28,967,380
JBrowse link
G Mfn2 mitofusin 2 ISO RGD PMID:26415228 RGD:13204741 NCBI chr 4:147,958,043...147,989,527
Ensembl chr 4:147,958,056...147,989,161
JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase ISO RGD PMID:9780001 RGD:2316946 NCBI chr 7:136,496,192...136,729,922
Ensembl chr 7:136,496,343...136,731,995
JBrowse link
G Mndal myeloid nuclear differentiation antigen like involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:173,684,786...173,708,035
Ensembl chr 1:173,676,692...173,708,447
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase ISO RGD PMID:27681750 RGD:13781886 NCBI chr12:32,870,334...32,903,368
Ensembl chr12:32,869,544...32,903,348
JBrowse link
G Net1 neuroepithelial cell transforming gene 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:3,932,018...3,968,220
Ensembl chr13:3,932,018...3,968,220
JBrowse link
G Rad1 RAD1 checkpoint DNA exonuclease involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:10,486,104...10,499,149
Ensembl chr15:10,486,104...10,499,149
JBrowse link
G Rad51 RAD51 recombinase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:118,943,295...118,966,554
Ensembl chr 2:118,943,274...118,977,926
JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:126,900,378...126,916,664
Ensembl chr 6:126,900,013...126,916,550
JBrowse link
G Rad9a RAD9 checkpoint clamp component A involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr19:4,245,195...4,251,710
Ensembl chr19:4,245,195...4,251,661
JBrowse link
G Rad9b RAD9 checkpoint clamp component B involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 5:122,461,286...122,492,297
Ensembl chr 5:122,461,286...122,492,296
JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:128,333,962...128,339,876
Ensembl chr 6:128,333,963...128,339,874
JBrowse link
G Rhob ras homolog family member B involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:8,547,661...8,550,009
Ensembl chr12:8,547,661...8,550,009
JBrowse link
G Rpl26 ribosomal protein L26 involved_in IMP (MGI:5882892|PMID:16213212) CAFA PMID:16213212 MGI:5882892 NCBI chr11:68,792,392...68,795,360
Ensembl chr11:68,792,409...68,797,815
JBrowse link
G Sirt1 sirtuin 1 involved_in IMP (MGI:5297784|PMID:17612497) UniProt PMID:17612497 MGI:5297784 NCBI chr10:63,154,784...63,174,814
Ensembl chr10:63,154,784...63,217,483
JBrowse link
G Snai2 snail family zinc finger 2 acts_upstream_of_or_within IGI (MGI:3690827|PMID:16286009) MGI PMID:16286009 MGI:3690827 NCBI chr16:14,523,716...14,527,259
Ensembl chr16:14,523,716...14,527,249
JBrowse link
G Spidr scaffolding protein involved in DNA repair involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:15,707,088...15,964,715
Ensembl chr16:15,707,088...15,964,715
JBrowse link
G Swi5 SWI5 recombination repair homolog (yeast) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:32,168,817...32,178,154
Ensembl chr 2:32,168,828...32,178,087
JBrowse link
G Tank TRAF family member-associated Nf-kappa B activator involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:61,408,901...61,484,515
Ensembl chr 2:61,408,929...61,484,515
JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within IMP
ISO
(MGI:3842254|PMID:17916808) MGI
RGD
PMID:17916808 PMID:25600523 MGI:3842254 RGD:11073671 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502
JBrowse link
G Tnks1bp1 tankyrase 1 binding protein 1 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 2:84,878,356...84,903,392
Ensembl chr 2:84,878,366...84,903,392
JBrowse link
G Trp53 transformation related protein 53 involved_in
acts_upstream_of_or_within
ISO
IGI
IDA
(MGI:3690827|PMID:16286009)
(MGI:5882892|PMID:16213212)
MGI
CAFA
PMID:16213212 PMID:16286009 GO_REF:0000096 MGI:3690827 MGI:4834177 MGI:5882892 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699
JBrowse link
cellular response to light stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crb1 crumbs family member 1, photoreceptor morphogenesis associated acts_upstream_of_or_within IMP (MGI:3696487|PMID:17234588) MGI PMID:17234588 MGI:3696487 NCBI chr 1:139,101,288...139,307,262
Ensembl chr 1:139,124,794...139,304,838
JBrowse link
G Gpr52 G protein-coupled receptor 52 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 1:160,402,287...160,407,274
Ensembl chr 1:160,403,908...160,405,544
JBrowse link
G Gpr88 G-protein coupled receptor 88 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:116,043,303...116,047,229
Ensembl chr 3:116,043,303...116,047,152
JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit ISO RGD PMID:17475674 RGD:9068879 NCBI chr12:73,948,098...73,994,328
Ensembl chr12:73,948,149...73,994,304
JBrowse link
G Kcne1 potassium voltage-gated channel, Isk-related subfamily, member 1 ISO RGD PMID:24202060 RGD:12910722 NCBI chr16:92,142,889...92,156,356
Ensembl chr16:92,142,870...92,156,356
JBrowse link
G Opn1mw opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan) involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:73,171,072...73,194,362
Ensembl chr  X:73,171,070...73,194,366
JBrowse link
G Opn1sw opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan) involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 6:29,376,670...29,380,512
Ensembl chr 6:29,376,670...29,388,467
JBrowse link
G Opn3 opsin 3 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 1:175,489,987...175,520,465
Ensembl chr 1:175,489,987...175,520,342
JBrowse link
G Opn4 opsin 4 (melanopsin) involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr14:34,312,575...34,322,099
Ensembl chr14:34,312,575...34,322,099
JBrowse link
G Opn5 opsin 5 involved_in IMP
IBA
(MGI:6376341|PMID:31607531)
(MGI:6201960|PMID:21873635)
UniProt
GO_Central
PMID:21873635 PMID:31607531 MGI:6201960 MGI:6376341 NCBI chr17:42,867,670...42,922,321
Ensembl chr17:42,867,674...42,922,286
JBrowse link
G Rgr retinal G protein coupled receptor involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr14:36,756,866...36,770,971
Ensembl chr14:36,756,866...36,770,921
JBrowse link
G Rho rhodopsin involved_in
acts_upstream_of_or_within
IBA
IMP
(MGI:6201960|PMID:21873635)
(MGI:4849309|PMID:21052544)
GO_Central
MGI
PMID:21052544 PMID:21873635 MGI:4849309 MGI:6201960 NCBI chr 6:115,903,741...115,916,999
Ensembl chr 6:115,908,709...115,916,997
JBrowse link
G Rp1 retinitis pigmentosa 1 (human) acts_upstream_of_or_within IMP (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chr 1:4,185,896...4,479,489
Ensembl chr 1:4,069,780...4,479,464
JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator acts_upstream_of_or_within IMP (MGI:1354839|PMID:10725384) MGI PMID:10725384 MGI:1354839 NCBI chr  X:10,024,455...10,083,034
Ensembl chr  X:9,939,860...10,083,159
JBrowse link
G Rrh retinal pigment epithelium derived rhodopsin homolog involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:129,602,223...129,618,140
Ensembl chr 3:129,598,057...129,616,236
JBrowse link
G Trpm1 transient receptor potential cation channel, subfamily M, member 1 involved_in
acts_upstream_of_or_within
IMP
ISO
(MGI:4398796|PMID:19861548)
(MGI:4849309|PMID:21052544)
(MGI:4420740|PMID:19966281)
UniProt
MGI
PMID:19861548 PMID:19966281 PMID:21052544 GO_REF:0000096 MGI:4398796 MGI:4420740 MGI:4834177 MGI:4849309 NCBI chr 7:63,803,583...63,923,630
Ensembl chr 7:63,803,583...63,919,523
JBrowse link
cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agap3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 acts_upstream_of_or_within ISO (MGI:3616374|PMID:16461359) MGI PMID:16461359 MGI:3616374 NCBI chr 5:24,657,175...24,707,045
Ensembl chr 5:24,657,175...24,707,045
JBrowse link
G Aqp1 aquaporin 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:55,313,284...55,325,540
Ensembl chr 6:55,313,417...55,325,540
JBrowse link
G Atr ataxia telangiectasia and Rad3 related involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:95,739,650...95,834,813
Ensembl chr 9:95,739,650...95,833,834
JBrowse link
G Aurkb aurora kinase B involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:68,936,450...68,942,490
Ensembl chr11:68,936,473...68,942,490
JBrowse link
G Bak1 BCL2-antagonist/killer 1 involved_in IMP
ISO
(MGI:3689797|PMID:15901672) UniProt
MGI
PMID:15901672 GO_REF:0000096 MGI:3689797 MGI:4834177 NCBI chr17:27,238,786...27,247,601
Ensembl chr17:27,238,784...27,247,983
JBrowse link
G Bax BCL2-associated X protein acts_upstream_of_or_within IGI (MGI:3042308|PMID:14963330) MGI PMID:14963330 MGI:3042308 NCBI chr 7:45,111,119...45,116,344
Ensembl chr 7:45,111,121...45,116,322
JBrowse link
G Bmf BCL2 modifying factor involved_in IDA
ISO
(MGI:5490676|PMID:23629966) CAFA
MGI
PMID:23629966 GO_REF:0000096 MGI:4834177 MGI:5490676 NCBI chr 2:118,359,238...118,385,280
Ensembl chr 2:118,359,238...118,380,168
JBrowse link
G Casp9 caspase 9 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:141,520,923...141,543,289
Ensembl chr 4:141,520,923...141,543,287
JBrowse link
G Cdc25a cell division cycle 25A involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:109,704,545...109,722,963
Ensembl chr 9:109,704,647...109,722,963
JBrowse link
G Cops9 COP9 signalosome subunit 9 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:92,564,867...92,569,707
Ensembl chr 1:92,564,867...92,569,707
JBrowse link
G Crebbp CREB binding protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:3,899,198...4,031,864
Ensembl chr16:3,899,192...4,031,861
JBrowse link
G Cul4a cullin 4A involved_in IC (MGI:6867266|PMID:22118460) ComplexPortal PMID:22118460 MGI:6867266 NCBI chr 8:13,155,623...13,197,940
Ensembl chr 8:13,155,621...13,197,940
JBrowse link
G Ddb1 damage specific DNA binding protein 1 involved_in IC (MGI:6867266|PMID:22118460) ComplexPortal PMID:22118460 MGI:6867266 NCBI chr19:10,582,932...10,607,192
Ensembl chr19:10,582,691...10,607,183
JBrowse link
G Ddb2 damage specific DNA binding protein 2 involved_in IC (MGI:6867266|PMID:22118460) ComplexPortal PMID:22118460 MGI:6867266 NCBI chr 2:91,041,924...91,067,465
Ensembl chr 2:91,041,917...91,067,327
JBrowse link
G Ddias DNA damage-induced apoptosis suppressor acts_upstream_of_or_within IMP (MGI:3718924|PMID:17515607) MGI PMID:17515607 MGI:3718924 NCBI chr 7:92,506,734...92,523,455
Ensembl chr 7:92,506,733...92,523,455
JBrowse link
G Dhx36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:62,375,436...62,414,464
Ensembl chr 3:62,375,434...62,414,425
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in IDA (MGI:5700311|PMID:12176355) UniProt PMID:12176355 MGI:5700311 NCBI chr 2:118,219,065...118,305,715
Ensembl chr 2:118,219,099...118,305,715
JBrowse link
G Eif2s1 eukaryotic translation initiation factor 2, subunit 1 alpha involved_in IDA (MGI:5700311|PMID:12176355) UniProt PMID:12176355 MGI:5700311 NCBI chr12:78,908,846...78,933,784
Ensembl chr12:78,908,593...78,933,784
JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:81,470,329...81,536,278
Ensembl chr15:81,469,552...81,536,278
JBrowse link
G Ercc4 excision repair cross-complementing rodent repair deficiency, complementation group 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:12,927,230...12,969,873
Ensembl chr16:12,927,548...12,968,481
JBrowse link
G Fbxw7 F-box and WD-40 domain protein 7 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:84,721,901...84,886,505
Ensembl chr 3:84,722,575...84,886,505
JBrowse link
G Ino80 INO80 complex subunit involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:119,203,523...119,308,168
Ensembl chr 2:119,203,523...119,308,168
JBrowse link
G Kdm1a lysine (K)-specific demethylase 1A acts_upstream_of_or_within ISO (MGI:5562615|PMID:24217620) MGI PMID:24217620 MGI:5562615 NCBI chr 4:136,277,844...136,330,127
Ensembl chr 4:136,277,851...136,330,034
JBrowse link
G Mapk13 mitogen-activated protein kinase 13 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:28,988,260...28,997,678
Ensembl chr17:28,988,271...28,999,207
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in ISO RGD
MGI
PMID:8875991 GO_REF:0000096 MGI:4417868 RGD:2304246 NCBI chr11:49,737,558...49,777,248
Ensembl chr11:49,737,578...49,777,248
JBrowse link
G Mettl3 methyltransferase like 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr14:52,532,298...52,548,555
Ensembl chr14:52,532,298...52,542,585
JBrowse link
G Myc myelocytomatosis oncogene involved_in ISO (PMID:17873522) UniProt PMID:17873522 NCBI chr15:61,857,190...61,862,210
Ensembl chr15:61,857,240...61,862,223
JBrowse link
G N4bp1 NEDD4 binding protein 1 involved_in ISO
IMP
(MGI:3829128|PMID:17592138) MGI
BHF-UCL
PMID:17592138 GO_REF:0000096 MGI:3829128 MGI:4834177 NCBI chr 8:87,567,764...87,612,489
Ensembl chr 8:87,534,788...87,611,886
JBrowse link
G Nedd4 neural precursor cell expressed, developmentally down-regulated 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:72,569,613...72,657,133
Ensembl chr 9:72,569,628...72,657,134
JBrowse link
G Nfatc4 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 4 acts_upstream_of_or_within IGI (MGI:3709926|PMID:17242187) MGI PMID:17242187 MGI:3709926 NCBI chr14:56,062,252...56,071,400
Ensembl chr14:56,060,601...56,071,400
JBrowse link
G Noc2l NOC2 like nucleolar associated transcriptional repressor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:156,319,112...156,332,073
Ensembl chr 4:156,320,376...156,332,073
JBrowse link
G Npm1 nucleophosmin 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:33,102,498...33,114,143
Ensembl chr11:33,102,287...33,113,206
JBrowse link
G Nscme3l NSE3 homolog, SMC5-SMC6 complex component like involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr19:5,552,795...5,553,815
Ensembl chr19:5,552,795...5,553,815
JBrowse link
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:64,521,430...64,522,788
Ensembl chr 7:64,516,800...64,522,745
JBrowse link
G Parp1 poly (ADP-ribose) polymerase family, member 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:180,396,456...180,428,564
Ensembl chr 1:180,396,489...180,428,819
JBrowse link
G Pbk PDZ binding kinase acts_upstream_of_or_within IMP (MGI:5293269|PMID:21715333) MGI PMID:21715333 MGI:5293269 NCBI chr14:66,043,360...66,055,271
Ensembl chr14:66,043,286...66,055,271
JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO MGI
RGD
PMID:8905661 GO_REF:0000096 MGI:4834177 RGD:10448977 NCBI chr 2:132,091,206...132,095,100
Ensembl chr 2:132,091,082...132,095,234
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 acts_upstream_of_or_within IMP
IGI
(MGI:3709926|PMID:17242187) MGI PMID:17242187 MGI:3709926 NCBI chr13:101,817,269...101,904,725
Ensembl chr13:101,817,071...101,904,725
JBrowse link
G Pold1 polymerase (DNA directed), delta 1, catalytic subunit involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:44,182,168...44,198,239
Ensembl chr 7:44,182,170...44,198,273
JBrowse link
G Polk polymerase (DNA directed), kappa involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:96,617,195...96,679,087
Ensembl chr13:96,617,198...96,679,087
JBrowse link
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A ISO RGD PMID:9811446 RGD:9999409 NCBI chr 7:45,172,341...45,175,692
Ensembl chr 7:45,172,340...45,175,692
JBrowse link
G Prkcd protein kinase C, delta involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr14:30,317,310...30,348,637
Ensembl chr14:30,317,311...30,348,167
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:22306367 RGD:5688265 NCBI chr 1:149,975,782...149,983,985
Ensembl chr 1:149,975,782...149,983,978
JBrowse link
G Ptn pleiotrophin ISO RGD PMID:17925408 RGD:10044023 NCBI chr 6:36,691,859...36,787,114
Ensembl chr 6:36,691,864...36,787,155
JBrowse link
G Ptprk protein tyrosine phosphatase, receptor type, K involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:27,950,406...28,473,393
Ensembl chr10:27,950,816...28,473,393
JBrowse link
G Rbx1 ring-box 1 involved_in IC (MGI:6867266|PMID:22118460) ComplexPortal PMID:22118460 MGI:6867266 NCBI chr15:81,350,517...81,360,570
Ensembl chr15:81,350,497...81,360,570
JBrowse link
G Rhbdd1 rhomboid domain containing 1 involved_in IDA (MGI:5430884|PMID:19358743) UniProt PMID:19358743 MGI:5430884 NCBI chr 1:82,294,178...82,423,087
Ensembl chr 1:82,294,173...82,423,087
JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:128,333,962...128,339,876
Ensembl chr 6:128,333,963...128,339,874
JBrowse link
G Rnf168 ring finger protein 168 acts_upstream_of_or_within IDA (MGI:5562615|PMID:24217620) MGI PMID:24217620 MGI:5562615 NCBI chr16:32,096,279...32,120,260
Ensembl chr16:32,096,277...32,120,252
JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:68,792,392...68,795,360
Ensembl chr11:68,792,409...68,797,815
JBrowse link
G Ruvbl2 RuvB-like protein 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:45,071,320...45,084,810
Ensembl chr 7:45,071,184...45,087,520
JBrowse link
G Sde2 SDE2 telomere maintenance homolog (S. pombe) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:180,678,716...180,695,678
Ensembl chr 1:180,678,692...180,695,678
JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1, acid lysosomal involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:105,203,567...105,207,596
Ensembl chr 7:105,203,567...105,207,596
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:24289924) ParkinsonsUK-UCL PMID:24289924 NCBI chr  X:100,576,335...100,645,395
Ensembl chr  X:100,576,340...100,645,395
JBrowse link
G Tmem161a transmembrane protein 161A involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:70,624,979...70,636,331
Ensembl chr 8:70,625,006...70,636,331
JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within IDA (MGI:5014018|PMID:20511593) MGI PMID:20511593 MGI:5014018 NCBI chr 9:108,887,000...108,888,791
Ensembl chr 9:108,887,001...108,888,802
JBrowse link
G Triap1 TP53 regulated inhibitor of apoptosis 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:115,479,290...115,481,612
Ensembl chr 5:115,479,284...115,481,628
JBrowse link
G Trp53 transformation related protein 53 acts_upstream_of_or_within
involved_in
IGI
IDA
ISO
(MGI:3042308|PMID:14963330)
(MGI:5490676|PMID:23629966)
MGI
CAFA
PMID:14963330 PMID:23629966 GO_REF:0000096 MGI:3042308 MGI:4834177 MGI:5490676 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699
JBrowse link
G Trp53inp1 transformation related protein 53 inducible nuclear protein 1 acts_upstream_of_or_within IDA (MGI:2153600|PMID:11557757) MGI PMID:11557757 MGI:2153600 NCBI chr 4:11,156,441...11,174,379
Ensembl chr 4:11,156,431...11,174,379
JBrowse link
G Usp28 ubiquitin specific peptidase 28 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:48,896,577...48,953,817
Ensembl chr 9:48,896,675...48,953,817
JBrowse link
G Usp47 ubiquitin specific peptidase 47 involved_in IMP (MGI:4839431|PMID:19966869) UniProt PMID:19966869 MGI:4839431 NCBI chr 7:111,621,846...111,710,593
Ensembl chr 7:111,622,711...111,710,868
JBrowse link
G Yy1 YY1 transcription factor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:108,758,841...108,786,074
Ensembl chr12:108,758,899...108,786,074
JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:76,416,825...76,443,729
Ensembl chr12:76,417,040...76,443,724
JBrowse link
cellular response to UV-A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cers1 ceramide synthase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:70,768,425...70,784,238
Ensembl chr 8:70,768,425...70,784,242
JBrowse link
G Mme membrane metallo endopeptidase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:63,202,632...63,291,134
Ensembl chr 3:63,148,958...63,293,451
JBrowse link
G Mmp1b matrix metallopeptidase 1b (interstitial collagenase) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:7,367,670...7,388,026
Ensembl chr 9:7,368,239...7,388,047
JBrowse link
G Mmp2 matrix metallopeptidase 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:93,553,920...93,580,049
Ensembl chr 8:93,553,919...93,580,048
JBrowse link
G Mmp3 matrix metallopeptidase 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:7,445,822...7,455,975
Ensembl chr 9:7,445,822...7,455,975
JBrowse link
G Mmp9 matrix metallopeptidase 9 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:164,782,246...164,797,770
Ensembl chr 2:164,782,700...164,797,770
JBrowse link
G Opn1sw opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:29,376,670...29,380,512
Ensembl chr 6:29,376,670...29,388,467
JBrowse link
G Opn3 opsin 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:175,489,987...175,520,465
Ensembl chr 1:175,489,987...175,520,342
JBrowse link
G Opn5 opsin 5 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:42,867,670...42,922,321
Ensembl chr17:42,867,674...42,922,286
JBrowse link
G Ppid peptidylprolyl isomerase D (cyclophilin D) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:79,498,644...79,511,117
Ensembl chr 3:79,498,649...79,510,957
JBrowse link
G Timp1 tissue inhibitor of metalloproteinase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:20,736,405...20,740,976
Ensembl chr  X:20,736,405...20,740,974
JBrowse link
cellular response to UV-B term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn1a cyclin-dependent kinase inhibitor 1A (P21) involved_in IDA (MGI:5613877|PMID:25329316) UniProt PMID:25329316 MGI:5613877 NCBI chr17:29,309,953...29,319,696
Ensembl chr17:29,309,950...29,319,701
JBrowse link
G Crip1 cysteine-rich protein 1 (intestinal) involved_in ISO
ISS
(MGI:5315680|PMID:20415737) MGI
UniProt
PMID:20415737 GO_REF:0000096 MGI:4834177 MGI:5315680 NCBI chr12:113,115,632...113,117,499
Ensembl chr12:113,109,936...113,117,499
JBrowse link
G Hyal1 hyaluronoglucosaminidase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:107,454,149...107,458,898
Ensembl chr 9:107,454,126...107,458,909
JBrowse link
G Hyal2 hyaluronoglucosaminidase 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:107,445,085...107,449,977
Ensembl chr 9:107,445,144...107,449,978
JBrowse link
G Hyal3 hyaluronoglucosaminidase 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:107,458,495...107,464,558
Ensembl chr 9:107,458,017...107,464,558
JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:72,115,970...72,272,954
Ensembl chr 2:72,115,981...72,272,954
JBrowse link
G Mapk11 mitogen-activated protein kinase 11 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:89,026,685...89,033,809
Ensembl chr15:89,026,689...89,033,831
JBrowse link
G Mapk14 mitogen-activated protein kinase 14 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:28,910,243...28,967,379
Ensembl chr17:28,910,303...28,967,380
JBrowse link
G Mfap4 microfibrillar-associated protein 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:61,376,257...61,379,536
Ensembl chr11:61,376,257...61,379,726
JBrowse link
G Mme membrane metallo endopeptidase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:63,202,632...63,291,134
Ensembl chr 3:63,148,958...63,293,451
JBrowse link
G Nlrp1a NLR family, pyrin domain containing 1A involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:70,982,023...71,035,780
Ensembl chr11:70,983,062...71,035,530
JBrowse link
G Nlrp1b NLR family, pyrin domain containing 1B involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:71,043,400...71,133,340
Ensembl chr11:71,043,928...71,121,559
JBrowse link
G Rpl13a ribosomal protein L13A ISO RGD PMID:10483362 RGD:11036101 NCBI chr 7:44,774,987...44,778,169
Ensembl chr 7:44,774,982...44,778,185
JBrowse link
G Rpl35 ribosomal protein L35 ISO RGD PMID:10483362 RGD:11036101 NCBI chr 2:38,891,593...38,895,143
Ensembl chr 2:38,891,592...38,895,636
JBrowse link
G Stk11 serine/threonine kinase 11 involved_in IDA
ISO
(MGI:5613877|PMID:25329316) UniProt
MGI
PMID:25329316 GO_REF:0000096 MGI:4834177 MGI:5613877 NCBI chr10:79,951,602...79,966,513
Ensembl chr10:79,951,637...79,966,516
JBrowse link
cellular response to UV-C term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ei24 etoposide induced 2.4 mRNA acts_upstream_of_or_within IGI (MGI:5543725|PMID:24014029) MGI PMID:24014029 MGI:5543725 NCBI chr 9:36,690,449...36,708,630
Ensembl chr 9:36,690,455...36,708,689
JBrowse link
G Impact impact, RWD domain protein involved_in IDA (MGI:5576818|PMID:24333428) UniProt PMID:24333428 MGI:5576818 NCBI chr18:13,087,747...13,126,007
Ensembl chr18:13,088,909...13,126,007
JBrowse link
G Mdm2 transformed mouse 3T3 cell double minute 2 ISO RGD PMID:14558917 RGD:2317408 NCBI chr10:117,524,780...117,546,663
Ensembl chr10:117,524,780...117,546,663
JBrowse link
G Pierce1 piercer of microtubule wall 1 acts_upstream_of_or_within IMP (MGI:4868626|PMID:21159655) MGI PMID:21159655 MGI:4868626 NCBI chr 2:28,352,013...28,356,336
Ensembl chr 2:28,352,013...28,356,344
JBrowse link
G Polh polymerase (DNA directed), eta (RAD 30 related) acts_upstream_of_or_within IGI
IMP
(MGI:3695544|PMID:17114294) MGI PMID:17114294 MGI:3695544 NCBI chr17:46,482,281...46,513,567
Ensembl chr17:46,482,281...46,513,571
JBrowse link
G Poli polymerase (DNA directed), iota acts_upstream_of_or_within IGI
IMP
(MGI:3695544|PMID:17114294) MGI PMID:17114294 MGI:3695544 NCBI chr18:70,641,751...70,668,021
Ensembl chr18:70,641,751...70,663,691
JBrowse link
G Trp53 transformation related protein 53 acts_upstream_of_or_within IGI (MGI:5543725|PMID:24014029) MGI PMID:24014029 MGI:5543725 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699
JBrowse link
cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ataxia telangiectasia mutated involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:53,348,422...53,448,125
Ensembl chr 9:53,350,449...53,448,040
JBrowse link
G Ccnd2 cyclin D2 acts_upstream_of_or_within IMP (MGI:5500853|PMID:23714078) MGI PMID:23714078 MGI:5500853 NCBI chr 6:127,102,125...127,131,913
Ensembl chr 6:127,102,125...127,129,156
JBrowse link
G Dbn1 drebrin 1 ISO RGD PMID:23578130 RGD:10398817 NCBI chr13:55,621,241...55,635,959
Ensembl chr13:55,621,242...55,635,924
JBrowse link
G Dnm2 dynamin 2 ISO RGD PMID:15994918 RGD:9685147 NCBI chr 9:21,336,167...21,419,055
Ensembl chr 9:21,336,204...21,419,055
JBrowse link
G Hamp hepcidin antimicrobial peptide ISO RGD PMID:17090718 RGD:11041722 NCBI chr 7:30,641,793...30,643,454
Ensembl chr 7:30,641,793...30,643,457
JBrowse link
G Kat5 K(lysine) acetyltransferase 5 ISO RGD PMID:15985650 RGD:2316135 NCBI chr19:5,653,042...5,661,584
Ensembl chr19:5,653,042...5,660,265
JBrowse link
G Lcn2 lipocalin 2 ISO RGD PMID:23331620 RGD:126790570 NCBI chr 2:32,274,649...32,277,751
Ensembl chr 2:32,274,645...32,278,264
JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:8,319,308...8,494,799
Ensembl chr15:8,320,101...8,473,947
JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:131,838,196...131,864,059
Ensembl chr 1:131,838,272...131,864,059
JBrowse link
G Prap1 proline-rich acidic protein 1 involved_in IMP (MGI:6694360|PMID:32629119) UniProt PMID:32629119 MGI:6694360 NCBI chr 7:139,673,309...139,677,116
Ensembl chr 7:139,673,308...139,677,113
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in IDA (MGI:4835111|PMID:19778523) UniProt PMID:19778523 MGI:4835111 NCBI chr 8:23,901,401...23,939,648
Ensembl chr 8:23,901,518...23,939,648
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 involved_in IDA (MGI:4835111|PMID:19778523) UniProt PMID:19778523 MGI:4835111 NCBI chr 3:83,673,628...83,681,621
Ensembl chr 3:83,673,628...83,681,623
JBrowse link
G Trp53bp1 transformation related protein 53 binding protein 1 ISO RGD PMID:21915754 RGD:9586753 NCBI chr 2:121,025,316...121,126,830
Ensembl chr 2:121,023,762...121,101,888
JBrowse link
G Xrcc5 X-ray repair complementing defective repair in Chinese hamster cells 5 involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
RGD
PMID:11966321 PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:6201960 RGD:727219 NCBI chr 1:72,346,576...72,434,112
Ensembl chr 1:72,346,586...72,434,111
JBrowse link
G Xrcc6 X-ray repair complementing defective repair in Chinese hamster cells 6 involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
RGD
PMID:11175667 PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:6201960 RGD:2317102 NCBI chr15:81,868,805...81,924,286
Ensembl chr15:81,872,036...81,924,286
JBrowse link
dark adaptation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnb5 guanine nucleotide binding protein (G protein), beta 5 acts_upstream_of_or_within IDA (MGI:5507748|PMID:23555598) MGI PMID:23555598 MGI:5507748 NCBI chr 9:75,213,570...75,253,205
Ensembl chr 9:75,213,570...75,253,158
JBrowse link
G Rgs9 regulator of G-protein signaling 9 acts_upstream_of_or_within IDA (MGI:5507748|PMID:23555598) MGI PMID:23555598 MGI:5507748 NCBI chr11:109,116,174...109,189,013
Ensembl chr11:109,116,181...109,188,955
JBrowse link
G Tent2 terminal nucleotidyltransferase 2 ISO RGD PMID:23700402 RGD:11041783 NCBI chr13:93,282,363...93,330,662
Ensembl chr13:93,282,790...93,328,893
JBrowse link
DNA synthesis involved in UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pola1 polymerase (DNA directed), alpha 1 NOT|involved_in ISO (PMID:1730053) UniProt PMID:1730053 NCBI chr  X:92,348,372...92,675,993
Ensembl chr  X:92,348,373...92,675,761
JBrowse link
G Pold3 polymerase (DNA-directed), delta 3, accessory subunit involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 7:99,731,317...99,770,709
Ensembl chr 7:99,731,318...99,770,772
JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within IMP (MGI:5562498|PMID:23993650) MGI PMID:23993650 MGI:5562498 NCBI chr 9:108,887,000...108,888,791
Ensembl chr 9:108,887,001...108,888,802
JBrowse link
negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nedd4 neural precursor cell expressed, developmentally down-regulated 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:72,569,613...72,657,133
Ensembl chr 9:72,569,628...72,657,134
JBrowse link
phototransduction, UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Opn5 opsin 5 involved_in ISO
IMP
(MGI:6230806|PMID:22043319) MGI
UniProt
PMID:22043319 GO_REF:0000096 MGI:4834177 MGI:6230806 NCBI chr17:42,867,670...42,922,321
Ensembl chr17:42,867,674...42,922,286
JBrowse link
positive regulation of cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmga2 high mobility group AT-hook 2 involved_in ISO (PMID:16061642) UniProt PMID:16061642 NCBI chr10:120,197,173...120,312,374
Ensembl chr10:120,197,180...120,312,374
JBrowse link
red, far-red light phototransduction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rho rhodopsin involved_in ISO RGD
MGI
PMID:2525480 GO_REF:0000096 MGI:4417868 RGD:6893558 NCBI chr 6:115,903,741...115,916,999
Ensembl chr 6:115,908,709...115,916,997
JBrowse link
regulation of cellular response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ataxia telangiectasia mutated involved_in ISO RGD
MGI
PMID:28007901 GO_REF:0000096 MGI:4417868 RGD:12879399 NCBI chr 9:53,348,422...53,448,125
Ensembl chr 9:53,350,449...53,448,040
JBrowse link
regulation of cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:9,861,889...9,892,762
Ensembl chr 2:9,861,889...9,894,845
JBrowse link
regulation of mRNA stability involved in cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Npm1 nucleophosmin 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:33,102,498...33,114,143
Ensembl chr11:33,102,287...33,113,206
JBrowse link
regulation of rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 acts_upstream_of_or_within IMP (MGI:3054118|PMID:15365173)
(MGI:3054134|PMID:15365178)
MGI PMID:15365173 PMID:15365178 MGI:3054118 MGI:3054134 NCBI chr11:71,919,527...71,933,184
Ensembl chr11:71,918,789...71,928,335
JBrowse link
G Grk1 G protein-coupled receptor kinase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:13,455,081...13,471,951
Ensembl chr 8:13,455,081...13,471,951
JBrowse link
regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chek1 checkpoint kinase 1 involved_in IMP (MGI:5294291|PMID:18243098) UniProt PMID:18243098 MGI:5294291 NCBI chr 9:36,619,778...36,637,954
Ensembl chr 9:36,619,778...36,638,361
JBrowse link
regulation of translation involved in cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpl26 ribosomal protein L26 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:68,792,392...68,795,360
Ensembl chr11:68,792,409...68,797,815
JBrowse link
rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnat1 G protein subunit alpha transducin 1 involved_in ISO RGD
MGI
PMID:11931744 GO_REF:0000096 MGI:4417868 RGD:1599009 NCBI chr 9:107,551,636...107,556,833
Ensembl chr 9:107,551,673...107,556,911
JBrowse link
G Opn4 opsin 4 (melanopsin) acts_upstream_of_or_within IDA (MGI:4438311|PMID:19793992) MGI PMID:19793992 MGI:4438311 NCBI chr14:34,312,575...34,322,099
Ensembl chr14:34,312,575...34,322,099
JBrowse link
G Pcp2 Purkinje cell protein 2 (L7) acts_upstream_of_or_within IMP (MGI:3817370|PMID:18768681) MGI PMID:18768681 MGI:3817370 NCBI chr 8:3,673,369...3,675,547
Ensembl chr 8:3,673,371...3,675,545
JBrowse link
G Rho rhodopsin involved_in ISO RGD
MGI
PMID:8814134 GO_REF:0000096 MGI:4417868 RGD:6893595 NCBI chr 6:115,903,741...115,916,999
Ensembl chr 6:115,908,709...115,916,997
JBrowse link
UV-damage excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr5 ARP5 actin-related protein 5 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:158,466,800...158,481,131
Ensembl chr 2:158,466,808...158,481,131
JBrowse link
G Cul4b cullin 4B involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:37,620,493...37,665,073
Ensembl chr  X:37,622,151...37,665,073
JBrowse link
G Ddb1 damage specific DNA binding protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr19:10,582,932...10,607,192
Ensembl chr19:10,582,691...10,607,183
JBrowse link
G Ddb2 damage specific DNA binding protein 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:91,041,924...91,067,465
Ensembl chr 2:91,041,917...91,067,327
JBrowse link
G Ercc1 excision repair cross-complementing rodent repair deficiency, complementation group 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 7:19,075,769...19,090,449
Ensembl chr 7:19,078,703...19,090,449
JBrowse link
G H2ac25 H2A clustered histone 25 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:58,845,511...58,846,018
Ensembl chr11:58,845,511...58,847,656
JBrowse link
G Ino80 INO80 complex subunit involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:119,203,523...119,308,168
Ensembl chr 2:119,203,523...119,308,168
JBrowse link
G Mc1r melanocortin 1 receptor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:124,133,821...124,137,483
Ensembl chr 8:124,133,846...124,137,483
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:63,154,784...63,174,814
Ensembl chr10:63,154,784...63,217,483
JBrowse link
G Xpa xeroderma pigmentosum, complementation group A involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 4:46,175,222...46,196,345
Ensembl chr 4:46,155,347...46,196,311
JBrowse link
G Xpc xeroderma pigmentosum, complementation group C involved_in ISO
IDA
(MGI:5427285|PMID:22431748) MGI PMID:22431748 GO_REF:0000096 MGI:4834177 MGI:5427285 NCBI chr 6:91,466,287...91,492,870
Ensembl chr 6:91,466,287...91,492,870
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28732
    response to stimulus 10809
      response to abiotic stimulus 1643
        response to radiation 578
          cellular response to radiation 216
            cellular response to ionizing radiation + 99
            cellular response to light stimulus + 129
Path 2
Term Annotations click to browse term
  biological_process 28732
    cellular process 17708
      cellular response to stimulus 8808
        cellular response to environmental stimulus 476
          cellular response to abiotic stimulus 476
            cellular response to radiation 216
              cellular response to ionizing radiation + 99
              cellular response to light stimulus + 129
paths to the root