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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to pH
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Accession:GO:0071467 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus. pH is a measure of the acidity or basicity of an aqueous solution.



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cellular response to pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asic1 acid sensing ion channel subunit 1 involved_in ISO
ISS
(PMID:22760635)
GO_REF:0000024
RGD
UniProt
PMID:22760635 GO_REF:0000024 NCBI chr 7:130,798,317...130,828,535
Ensembl chr 7:130,799,917...130,828,541
JBrowse link
G Gja1 gap junction protein, alpha 1 involved_in ISO (MGI:5882903|PMID:14699011) RGD PMID:14699011 MGI:5882903 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582
JBrowse link
G Gna11 G protein subunit alpha 11 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5444590|PMID:22733973)
Ensembl
RGD
PMID:22733973 GO_REF:0000107 MGI:5444590 NCBI chr 7:8,163,752...8,177,636
Ensembl chr 7:8,162,750...8,179,812
JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 involved_in ISO
IEA
ISS
(PMID:17761367)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:17761367 GO_REF:0000024 GO_REF:0000107 NCBI chr17:40,084,427...40,132,035
Ensembl chr17:40,084,617...40,126,939
JBrowse link
G Gpr68 G protein-coupled receptor 68 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5445001 (MGI:5444590|PMID:22733973)
RGD PMID:22733973 PMID:21873635 MGI:5444590, RGD:13792537 NCBI chr 6:120,135,620...120,166,089
Ensembl chr 6:120,135,436...120,166,089
JBrowse link
G Hvcn1 hydrogen voltage-gated channel 1 involved_in ISO (PMID:22020278) RGD PMID:22020278 NCBI chr12:34,341,673...34,370,010
Ensembl chr12:34,335,190...34,370,141
JBrowse link
G Hyal1 hyaluronidase 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:19478093)
UniProt
RGD
PMID:19478093 GO_REF:0000024 NCBI chr 8:108,250,654...108,254,526
Ensembl chr 8:108,250,667...108,260,210
JBrowse link
G Kcnk18 potassium two pore domain channel subfamily K member 18 involved_in ISO (PMID:12754259) RGD PMID:12754259 NCBI chr 1:258,374,671...258,388,945
Ensembl chr 1:258,374,671...258,388,945
JBrowse link
G Mcoln1 mucolipin TRP cation channel 1 involved_in ISO (MGI:6103412|PMID:29019981) RGD PMID:29019981 MGI:6103412 NCBI chr12:1,560,341...1,574,252
Ensembl chr12:1,560,359...1,574,252
JBrowse link
G Pkd2l1 polycystin 2 like 1, transient receptor potential cation channel involved_in ISO (MGI:6245961|PMID:28904867) RGD PMID:28904867 MGI:6245961 NCBI chr 1:243,032,853...243,070,031
Ensembl chr 1:243,032,913...243,070,031
JBrowse link
cellular response to acidic pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp10 aquaporin 10 involved_in ISO (PMID:30420639) RGD PMID:30420639 NCBI chr 2:175,402,609...175,407,677
Ensembl chr 2:175,403,263...175,406,815
JBrowse link
G Asic2 acid sensing ion channel subunit 2 IDA RGD PMID:12736332 RGD:1298620 NCBI chr10:65,870,592...66,940,577
Ensembl chr10:65,870,594...66,940,424
JBrowse link
G Chp1 calcineurin-like EF-hand protein 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 3:106,536,009...106,571,255
Ensembl chr 3:106,536,004...106,571,251
JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEP RGD PMID:26033523 RGD:13204712 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
JBrowse link
G Impact impact RWD domain protein involved_in ISS
ISO
GO_REF:0000024
(MGI:5576818|PMID:24333428)
UniProt
RGD
PMID:24333428 GO_REF:0000024 MGI:5576818 NCBI chr18:4,108,872...4,147,571
Ensembl chr18:4,108,853...4,147,569
JBrowse link
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 IDA RGD PMID:8458414 RGD:7243874 NCBI chr11:31,580,951...31,594,116
Ensembl chr11:31,580,742...31,593,901
JBrowse link
G Pkd1l3 polycystin 1 like 3, transient receptor potential channel interacting involved_in
NOT|involved_in
ISO (MGI:5315344|PMID:16891422)
(MGI:4888566|PMID:20605874)
RGD PMID:16891422 PMID:20605874 MGI:4888566 MGI:5315344 NCBI chr19:37,585,564...37,650,083
Ensembl chr19:37,585,725...37,650,155
JBrowse link
G Pkd2l1 polycystin 2 like 1, transient receptor potential cation channel involved_in ISO (MGI:5315344|PMID:16891422), (MGI:6149416|PMID:29567962) RGD PMID:16891422 PMID:29567962 MGI:5315344 MGI:6149416 NCBI chr 1:243,032,853...243,070,031
Ensembl chr 1:243,032,913...243,070,031
JBrowse link
G Rab11b RAB11B, member RAS oncogene family involved_in ISO
ISS
(PMID:20717956)
GO_REF:0000024
RGD
UniProt
PMID:20717956 GO_REF:0000024 NCBI chr 7:14,521,448...14,534,589
Ensembl chr 7:14,521,368...14,534,593
JBrowse link
G Rab11fip5 RAB11 family interacting protein 5 involved_in ISO (PMID:20717956) RGD PMID:20717956 NCBI chr 4:117,871,301...117,908,819
Ensembl chr 4:117,871,308...117,908,741
JBrowse link
G Scnn1a sodium channel epithelial 1 subunit alpha involved_in ISO
IEA
(PMID:16423824)
GO_REF:0000107
RGD
Ensembl
PMID:16423824 GO_REF:0000107 NCBI chr 4:158,122,962...158,146,184
Ensembl chr 4:158,122,962...158,146,181
JBrowse link
G Scnn1b sodium channel epithelial 1 subunit beta involved_in ISO
IEA
(PMID:16423824)
GO_REF:0000107
RGD
Ensembl
PMID:16423824 GO_REF:0000107 NCBI chr 1:176,430,063...176,484,451
Ensembl chr 1:176,430,103...176,484,451
JBrowse link
G Scnn1g sodium channel epithelial 1 subunit gamma involved_in ISO
IEA
(PMID:16423824)
GO_REF:0000107
RGD
Ensembl
PMID:16423824 GO_REF:0000107 NCBI chr 1:176,304,942...176,338,816
Ensembl chr 1:176,304,942...176,338,816
JBrowse link
G Slc9a1 solute carrier family 9 member A1 involved_in ISS
ISO
GO_REF:0000024
(PMID:24840010)
UniProt
RGD
PMID:24840010 GO_REF:0000024 NCBI chr 5:145,576,341...145,629,630
Ensembl chr 5:145,576,334...145,629,624
JBrowse link
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 involved_in ISO
IDA
(PMID:11226139) RGD PMID:11226139 PMID:11226139 RGD:11535102 NCBI chr10:57,851,428...57,876,513
Ensembl chr10:57,851,428...57,876,513
JBrowse link
cellular response to alkaline pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gh1 growth hormone 1 IEP RGD PMID:23639351 RGD:10003149 NCBI chr10:91,228,102...91,230,079
Ensembl chr10:91,228,103...91,230,078
JBrowse link
G Insrr insulin receptor-related receptor involved_in ISO (PMID:21641549)
(MGI:5288297|PMID:21641549)
RGD PMID:21641549 MGI:5288297 NCBI chr 2:173,255,335...173,274,800
Ensembl chr 2:173,255,414...173,274,800
JBrowse link
G Kcnk4 potassium two pore domain channel subfamily K member 4 involved_in IDA PMID:15677687 UniProt PMID:15677687 RGD:10047327 NCBI chr 1:204,117,941...204,129,494
Ensembl chr 1:204,114,572...204,125,925
JBrowse link
cellular stress response to acidic pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nox1 NADPH oxidase 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:10615049)
Ensembl
RGD
PMID:10615049 GO_REF:0000107 NCBI chr  X:97,279,058...97,332,291
Ensembl chr  X:97,279,056...97,302,236
JBrowse link
positive regulation of transcription from RNA polymerase II promoter in response to acidic pH term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pck1 phosphoenolpyruvate carboxykinase 1 acts_upstream_of_or_within ISO (MGI:3851650|PMID:19458124) RGD PMID:19458124 MGI:3851650 NCBI chr 3:161,930,256...161,936,205
Ensembl chr 3:161,930,256...161,936,191
JBrowse link
G Slc38a3 solute carrier family 38, member 3 acts_upstream_of_or_within ISO (MGI:3851650|PMID:19458124) RGD PMID:19458124 MGI:3851650 NCBI chr 8:108,323,889...108,339,959
Ensembl chr 8:108,323,894...108,339,988
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19874
    response to stimulus 10557
      response to abiotic stimulus 1584
        response to pH 60
          cellular response to pH 30
            cellular response to acidic pH + 18
            cellular response to alkaline pH + 3
            cellular response to neutral pH 0
Path 2
Term Annotations click to browse term
  biological_process 19874
    cellular process 18551
      cellular response to stimulus 8936
        cellular response to environmental stimulus 440
          cellular response to abiotic stimulus 440
            cellular response to pH 30
              cellular response to acidic pH + 18
              cellular response to alkaline pH + 3
              cellular response to neutral pH 0
paths to the root