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ONTOLOGY REPORT - ANNOTATIONS


Term:protein localization to chromosome, centromeric region
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Accession:GO:0071459 term browser browse the term
Definition:Any process in which a protein is transported to, or maintained at, the centromeric region of a chromosome.
Synonyms:exact_synonym: protein localisation to chromosome, centromeric region;   protein localization to centromere;   protein localization to chromosome, centric region


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protein localization to chromosome, centromeric region term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BOD1 biorientation of chromosomes in cell division 1 involved_in ISO (PMID:17938248), (PMID:24157919) UniProt PMID:17938248 PMID:24157919 NCBI chr 4:38,888,096...38,895,539 JBrowse link
G BUB1B BUB1 mitotic checkpoint serine/threonine kinase B acts_upstream_of_or_within ISO (MGI:3839184|PMID:19283064) MGI PMID:19283064 MGI:3839184 NCBI chr30:7,361,982...7,410,162
Ensembl chr30:7,322,912...7,438,052
JBrowse link
G CENPA centromere protein A involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:20,808,320...20,833,747
Ensembl chr17:20,811,663...20,819,568
JBrowse link
G CTCF CCCTC-binding factor involved_in ISO (PMID:26321640) UniProt PMID:26321640 NCBI chr 5:81,808,512...81,863,811
Ensembl chr 5:81,809,393...81,858,655
JBrowse link
G HASPIN histone H3 associated protein kinase involved_in ISO (PMID:20705812) UniProt PMID:20705812 NCBI chr 9:47,540,417...47,542,953
Ensembl chr 9:47,540,446...47,542,791
JBrowse link
G RB1 RB transcriptional corepressor 1 involved_in ISO (PMID:20551165) BHF-UCL PMID:20551165 NCBI chr22:3,061,621...3,204,625
Ensembl chr22:3,063,239...3,257,726
JBrowse link
G SMC5 structural maintenance of chromosomes 5 acts_upstream_of_or_within ISO (MGI:5882483|PMID:26919979) MGI PMID:26919979 MGI:5882483 NCBI chr 1:87,192,988...87,285,678
Ensembl chr 1:87,194,867...87,285,606
JBrowse link
chromosome passenger complex localization to kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RCC2 regulator of chromosome condensation 2 involved_in ISO (PMID:12919680) UniProt PMID:12919680 NCBI chr 2:80,865,091...80,887,819
Ensembl chr 2:80,869,369...80,885,928
JBrowse link
histone H3-T3 phosphorylation involved in chromosome passenger complex localization to kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HASPIN histone H3 associated protein kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:47,540,417...47,542,953
Ensembl chr 9:47,540,446...47,542,791
JBrowse link
negative regulation of protein localization to kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDT1 chromatin licensing and DNA replication factor 1 involved_in ISO (PMID:22581055) CAFA PMID:22581055 NCBI chr 5:64,566,035...64,570,361
Ensembl chr 5:64,566,043...64,570,748
JBrowse link
positive regulation of protein localization to kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDT1 chromatin licensing and DNA replication factor 1 involved_in ISO (PMID:22581055) CAFA PMID:22581055 NCBI chr 5:64,566,035...64,570,361
Ensembl chr 5:64,566,043...64,570,748
JBrowse link
G CENPQ centromere protein Q involved_in ISO (PMID:25395579) UniProt PMID:25395579 NCBI chr12:17,339,914...17,355,921
Ensembl chr12:17,340,001...17,355,937
JBrowse link
G NDC80 NDC80 kinetochore complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:69,268,218...69,317,126
Ensembl chr 7:69,268,242...69,317,072
JBrowse link
G TRAPPC12 trafficking protein particle complex subunit 12 involved_in ISO (PMID:25918224) UniProt PMID:25918224 NCBI chr17:1,988,952...2,072,854
Ensembl chr17:1,999,613...2,072,502
JBrowse link
protein localization to kinetochore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AURKB aurora kinase B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:33,014,098...33,028,951
Ensembl chr 5:33,014,102...33,033,948
JBrowse link
G BUB3 BUB3 mitotic checkpoint protein involved_in ISO (PMID:9660858) UniProt PMID:9660858 NCBI chr28:32,693,104...32,703,293
Ensembl chr28:32,679,421...32,703,023
JBrowse link
G CDK1 cyclin dependent kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:12,884,106...12,899,203
Ensembl chr 4:12,883,385...12,899,197
JBrowse link
G CHAMP1 chromosome alignment maintaining phosphoprotein 1 involved_in ISO (PMID:21063390) UniProt PMID:21063390 NCBI chr22:61,367,007...61,378,111
Ensembl chr22:61,368,049...61,378,111
JBrowse link
G IK IK cytokine involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:35,805,631...35,818,205
Ensembl chr 2:35,805,689...35,818,050
JBrowse link
G KNL1 kinetochore scaffold 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(PMID:22331848)
GO_Central
MGI
PMID:21873635 PMID:22331848 NCBI chr30:7,753,515...7,825,019
Ensembl chr30:7,753,432...7,821,588
JBrowse link
G LOC102154136 protein MIS12 homolog involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:42,965,045...42,966,881 JBrowse link
G MIS12 MIS12 kinetochore complex component involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:31,314,067...31,319,392 JBrowse link
G MTBP MDM2 binding protein involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(PMID:21274008)
GO_Central
MGI
PMID:21274008 PMID:21873635 NCBI chr13:19,313,884...19,385,370
Ensembl chr13:19,313,973...19,384,621
JBrowse link
G SPDL1 spindle apparatus coiled-coil protein 1 involved_in ISO (PMID:19468067) UniProt PMID:19468067 NCBI chr 4:42,214,997...42,235,282
Ensembl chr 4:41,780,436...42,235,177
JBrowse link
G TTK TTK protein kinase involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5049806|PMID:21558374)
GO_Central
MGI
PMID:21558374 PMID:21873635 MGI:5049806 NCBI chr12:40,915,733...40,959,423
Ensembl chr12:40,915,439...40,957,279
JBrowse link
G ZW10 zw10 kinetochore protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:19,496,531...19,527,205
Ensembl chr 5:19,496,611...19,527,200
JBrowse link
G ZWILCH zwilch kinetochore protein involved_in ISO (PMID:15824131) UniProt PMID:15824131 NCBI chr30:30,772,219...30,811,055
Ensembl chr30:30,772,057...30,809,040
JBrowse link
protein localization to pericentric heterochromatin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JARID2 jumonji and AT-rich interaction domain containing 2 acts_upstream_of_or_within ISO (MGI:5888829|PMID:27892467) MGI PMID:27892467 MGI:5888829 NCBI chr35:14,476,656...14,737,535
Ensembl chr35:14,445,914...14,736,158
JBrowse link

Term paths to the root
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Term Annotations click to browse term
  biological_process 13863
    localization 5399
      macromolecule localization 2515
        protein localization 2157
          cellular protein localization 1549
            protein localization to organelle 848
              protein localization to chromosome 97
                protein localization to chromosome, centromeric region 26
                  protein localization to CENP-A containing chromatin 0
                  protein localization to kinetochore + 19
                  protein localization to pericentric heterochromatin 1
paths to the root