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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to oxygen levels
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Accession:GO:0071453 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of oxygen.
Synonyms:related_synonym: cellular response to oxygen



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cellular response to oxygen levels term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lpar1 lysophosphatidic acid receptor 1 IEP RGD PMID:18978343 RGD:2317687 NCBI chr 5:73,229,047...73,347,874
Ensembl chr 5:73,229,625...73,369,895
JBrowse link
G Myod1 myogenic differentiation 1 acts_upstream_of_or_within ISO (MGI:3840749|PMID:19319192) RGD PMID:19319192 MGI:3840749 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
JBrowse link
G Ndufs2 NADH:ubiquinone oxidoreductase core subunit S2 involved_in ISO
IMP
(PMID:30922174)
(MGI:6208149|PMID:29887397), (MGI:6220487|PMID:26437605), (MGI:6442705|PMID:30922174)
RGD PMID:26437605 PMID:29887397 PMID:30922174 PMID:30922174 MGI:6208149 MGI:6220487 MGI:6442705, RGD:42722001 NCBI chr13:83,654,402...83,671,474
Ensembl chr13:83,654,406...83,671,420
JBrowse link
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 acts_upstream_of_or_within ISO MGI:3527173 (MGI:6220487|PMID:26437605) RGD PMID:26437605 MGI:6220487 NCBI chr 2:45,951,327...46,061,829
Ensembl chr 2:45,951,313...46,061,846
JBrowse link
G Polr2a RNA polymerase II subunit A IEP RGD PMID:19095046 RGD:9681725 NCBI chr10:54,452,438...54,478,486
Ensembl chr10:54,452,441...54,478,455
JBrowse link
G Pou4f2 POU class 4 homeobox 2 involved_in IMP PMID:25356872 BHF-UCL PMID:25356872 RGD:13792547 NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
JBrowse link
G Uck2 uridine-cytidine kinase 2 IEP RGD PMID:2164139 RGD:2317209 NCBI chr13:79,380,807...79,438,352
Ensembl chr13:79,383,846...79,438,352
JBrowse link
cellular response to anoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cftr CF transmembrane conductance regulator IEP RGD PMID:14975182 RGD:1599599 NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756
JBrowse link
G Daxx death-domain associated protein IEP RGD PMID:17289031 RGD:9587773 NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
JBrowse link
G Eef2k eukaryotic elongation factor-2 kinase IEP RGD PMID:12194824 RGD:8553742 NCBI chr 1:175,393,119...175,454,452
Ensembl chr 1:175,393,154...175,455,164
JBrowse link
cellular response to decreased oxygen levels term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 acts_upstream_of_or_within ISO (MGI:5584033|PMID:24875179) RGD PMID:24875179 MGI:5584033 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921
JBrowse link
G Cpeb4 cytoplasmic polyadenylation element binding protein 4 involved_in IDA PMID:20937770 UniProt PMID:20937770 RGD:8553637 NCBI chr10:15,717,794...15,780,482
Ensembl chr10:15,717,794...15,780,603
JBrowse link
G Mir106a microRNA 106a acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr  X:132,422,584...132,422,661
Ensembl chr  X:132,422,584...132,422,661
JBrowse link
G Mir142 microRNA 142 acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr10:72,557,864...72,557,950
Ensembl chr10:72,557,857...72,557,967
JBrowse link
G Mir146a microRNA 146a acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr10:27,848,516...27,848,610
Ensembl chr10:27,848,516...27,848,610
JBrowse link
G Mir150 microRNA 150 acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr 1:95,605,024...95,605,108
Ensembl chr 1:95,605,024...95,605,108
JBrowse link
G Mir15b microRNA 15b acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr 2:153,245,200...153,245,297
Ensembl chr 2:153,245,200...153,245,297
JBrowse link
G Mir17 microRNA 17 acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr15:92,180,629...92,180,712
Ensembl chr15:92,180,629...92,180,712
JBrowse link
G Mir199a2 microRNA 199a-2 acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr13:74,582,954...74,583,063
Ensembl chr13:74,582,954...74,583,063
JBrowse link
G Mir204 microRNA 204 acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr 1:220,316,931...220,317,040
Ensembl chr 1:220,316,931...220,317,040
JBrowse link
G Mir20b microRNA 20b acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr  X:132,422,211...132,422,282
Ensembl chr  X:132,422,211...132,422,282
JBrowse link
G Mir21 microRNA 21 acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
JBrowse link
G Mir221 microRNA 221 acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr  X:3,429,465...3,429,573
Ensembl chr  X:3,429,465...3,429,573
JBrowse link
G Mir222 microRNA 222 acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr  X:3,428,904...3,429,006
Ensembl chr  X:3,428,904...3,429,006
JBrowse link
G Mir223 microRNA 223 acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr  X:61,141,887...61,141,996
Ensembl chr  X:61,141,887...61,141,996
JBrowse link
G Mir31 microRNA 31 acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr 5:103,599,038...103,599,143 JBrowse link
G Mir499a microRNA 499a acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr 3:144,110,469...144,110,533
Ensembl chr 3:144,110,469...144,110,533
JBrowse link
G Pick1 protein interacting with PRKCA 1 involved_in IMP PMID:23843614 UniProt PMID:23843614 RGD:8553949 NCBI chr 7:110,796,623...110,816,850
Ensembl chr 7:110,797,117...110,816,848
JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within ISO (MGI:5584033|PMID:24875179) RGD PMID:24875179 MGI:5584033 NCBI chr 1:230,631,303...230,696,754
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
cellular response to hyperoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg7 autophagy related 7 involved_in ISS
ISO
GO_REF:0000024
(PMID:20543840)
UniProt
RGD
PMID:20543840 GO_REF:0000024 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Cav1 caveolin 1 involved_in ISO (PMID:21382479) RGD PMID:21382479 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta IEP RGD PMID:23039253 RGD:9589076 NCBI chr 3:142,130,592...142,169,124
Ensembl chr 3:142,130,592...142,169,124
JBrowse link
G Egr1 early growth response 1 IEP RGD PMID:15734424 RGD:5131935 NCBI chr18:26,463,333...26,465,531
Ensembl chr18:26,462,981...26,466,766
JBrowse link
G Fas Fas cell surface death receptor involved_in ISO (PMID:21382479) RGD PMID:21382479 NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
JBrowse link
G Foxo1 forkhead box O1 involved_in ISS
ISO
GO_REF:0000024
(PMID:20543840)
UniProt
RGD
PMID:20543840 GO_REF:0000024 NCBI chr 2:136,312,168...136,390,603
Ensembl chr 2:136,312,168...136,387,790
JBrowse link
G Nox1 NADPH oxidase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3616995 (MGI:4881403|PMID:19661248)
Ensembl
RGD
PMID:19661248 GO_REF:0000107 MGI:4881403 NCBI chr  X:97,279,058...97,332,291
Ensembl chr  X:97,279,056...97,302,236
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma IEP RGD PMID:22444276 RGD:8553189 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Txn1 thioredoxin 1 IEP RGD PMID:21505996 RGD:5133704 NCBI chr 5:72,712,334...72,724,564
Ensembl chr 5:72,711,933...72,724,629
JBrowse link
G Txnrd1 thioredoxin reductase 1 IEP RGD PMID:21505996 RGD:5133704 NCBI chr 7:20,830,042...20,914,990
Ensembl chr 7:20,830,045...20,907,863
JBrowse link
cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaa2 acetyl-CoA acyltransferase 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:18371312)
Ensembl
RGD
PMID:18371312 GO_REF:0000107 NCBI chr18:68,345,136...68,373,246
Ensembl chr18:68,345,012...68,373,249
JBrowse link
G Adam8 ADAM metallopeptidase domain 8 involved_in ISO (PMID:18566576) RGD PMID:18566576 NCBI chr 1:194,776,559...194,789,330
Ensembl chr 1:194,770,060...194,788,801
JBrowse link
G Ado 2-aminoethanethiol dioxygenase involved_in ISO (PMID:31273118) RGD PMID:31273118 NCBI chr20:21,044,815...21,045,983
Ensembl chr20:21,044,555...21,049,235
JBrowse link
G Adrb2 adrenoceptor beta 2 IDA RGD PMID:19098126 RGD:8548506 NCBI chr18:55,642,459...55,644,501
Ensembl chr18:55,502,903...55,644,512
JBrowse link
G Ak4 adenylate kinase 4 involved_in
acts_upstream_of
ISO
ISS
(PMID:30696468)
(PMID:19130895), (PMID:23474458), (PMID:26980435)
GO_REF:0000024
RGD
UniProt
PMID:19130895 PMID:23474458 PMID:26980435 PMID:30696468 GO_REF:0000024 NCBI chr 5:116,039,222...116,099,064
Ensembl chr 5:116,039,616...116,098,618
JBrowse link
G Akt1 AKT serine/threonine kinase 1 IDA RGD PMID:20515660 RGD:5509097 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921
JBrowse link
G Angpt4 angiopoietin 4 involved_in ISO (PMID:12958144) RGD PMID:12958144 NCBI chr 3:140,420,389...140,454,213
Ensembl chr 3:140,420,389...140,453,583
JBrowse link
G Ankrd1 ankyrin repeat domain 1 IEP RGD PMID:19299913 RGD:5133278 NCBI chr 1:233,815,851...233,834,891
Ensembl chr 1:233,815,851...233,834,919
JBrowse link
G Aqp1 aquaporin 1 involved_in ISO
ISS
(PMID:18275976)
GO_REF:0000024
RGD
UniProt
PMID:18275976 GO_REF:0000024 NCBI chr 4:84,482,512...84,494,690
Ensembl chr 4:84,482,512...84,494,690
JBrowse link
G Aqp3 aquaporin 3 (Gill blood group) acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:24462679)
GO_REF:0000107
RGD
Ensembl
PMID:24462679 GO_REF:0000107 NCBI chr 5:56,239,200...56,244,718
Ensembl chr 5:56,239,201...56,244,720
JBrowse link
G Asl argininosuccinate lyase IEP RGD PMID:11097477 RGD:1599264 NCBI chr12:26,659,664...26,677,136
Ensembl chr12:26,659,565...26,679,662
JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b IEP RGD PMID:29300489 RGD:13792656 NCBI chr 2:193,424,138...193,435,418
Ensembl chr 2:193,424,047...193,435,418
JBrowse link
G Atp7a ATPase copper transporting alpha IEP RGD PMID:21346155 RGD:11341705 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354
JBrowse link
G B3gat1 beta-1,3-glucuronyltransferase 1 IEP RGD PMID:21400481 RGD:14390075 NCBI chr 8:25,087,123...25,114,692
Ensembl chr 8:25,087,547...25,113,395
JBrowse link
G Bad BCL2-associated agonist of cell death involved_in ISO
IBA
(PMID:20810912)
PMID:21873635
RGD PMID:20810912 PMID:21873635 RGD:13792537 NCBI chr 1:204,133,502...204,142,829
Ensembl chr 1:204,131,501...204,142,823
JBrowse link
G Bbc3 Bcl-2 binding component 3 involved_in ISO (PMID:20810912) RGD PMID:20810912 NCBI chr 1:77,013,281...77,022,509
Ensembl chr 1:77,014,543...77,022,509
JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within IEP
ISO
with serum deprivation
(MGI:77298|PMID:7595537)
RGD PMID:7595537 PMID:20669351 MGI:77298, RGD:11353793 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743
JBrowse link
G Bcl2l1 Bcl2-like 1 IEP with serum deprivation RGD PMID:20669351 RGD:11353793 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479
JBrowse link
G Bdkrb2 bradykinin receptor B2 IEP RGD PMID:19565561 RGD:4891057 NCBI chr 6:124,472,317...124,502,497
Ensembl chr 6:124,472,566...124,502,497
JBrowse link
G Bnip3 BCL2 interacting protein 3 acts_upstream_of_or_within
involved_in
IEP
ISO
UniProtKB:O60238 (PMID:19273585)
(PMID:20436456)
RGD PMID:19273585 PMID:20436456 PMID:17379825 RGD:9685412 NCBI chr 1:193,708,164...193,725,348
Ensembl chr 1:193,708,167...193,725,359
JBrowse link
G Bnip3l BCL2 interacting protein 3 like acts_upstream_of_or_within ISO UniProtKB:Q12983 (PMID:19273585) RGD PMID:19273585 NCBI chr15:41,174,594...41,197,730
Ensembl chr15:41,174,594...41,197,803
JBrowse link
G Brip1 BRCA1 interacting helicase 1 IEP RGD PMID:12511571 RGD:11251702 NCBI chr10:70,907,266...71,031,502
Ensembl chr10:70,907,371...71,030,324
JBrowse link
G Casr calcium-sensing receptor IEP RGD PMID:21073657 RGD:7206834 NCBI chr11:64,235,251...64,304,811
Ensembl chr11:64,235,251...64,304,811
JBrowse link
G Cav1 caveolin 1 IEP RGD PMID:29069575 RGD:151347449 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Cbs cystathionine beta synthase involved_in IDA PMID:20149843 UniProt PMID:20149843 RGD:8554341 NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764
JBrowse link
G Ccna2 cyclin A2 IEP RGD PMID:25289051 RGD:10054493 NCBI chr 2:119,427,239...119,433,645
Ensembl chr 2:119,426,089...119,433,577
JBrowse link
G Ccnb1 cyclin B1 IEP RGD PMID:12374461 RGD:2316579 NCBI chr 2:31,912,190...31,921,163
Ensembl chr 2:31,912,193...31,921,172
JBrowse link
G Cdkn1b cyclin-dependent kinase inhibitor 1B IEP RGD PMID:28854428 RGD:152025191 NCBI chr 4:167,760,067...167,765,177
Ensembl chr 4:167,760,181...167,764,982
JBrowse link
G Cflar CASP8 and FADD-like apoptosis regulator IEP RGD PMID:12031707 RGD:8663470 NCBI chr 9:60,185,338...60,236,173
Ensembl chr 9:60,185,452...60,237,034
JBrowse link
G Clca1 chloride channel accessory 1 IEP RGD PMID:18616988 RGD:4188872 NCBI chr 2:233,938,677...233,964,369
Ensembl chr 2:233,938,677...233,964,369
JBrowse link
G Cox4i2 cytochrome c oxidase subunit 4i2 IEP RGD PMID:23303788 RGD:11344908 NCBI chr 3:141,228,443...141,239,337
Ensembl chr 3:141,228,443...141,239,331
JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 involved_in ISO
ISS
(PMID:18752464)
(MGI:5543770|PMID:18752464)
GO_REF:0000024
RGD
UniProt
PMID:18752464 GO_REF:0000024 MGI:5543770 NCBI chr 1:135,300,048...135,407,688
Ensembl chr 1:135,300,461...135,409,760
JBrowse link
G Cpeb2 cytoplasmic polyadenylation element binding protein 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5543770|PMID:18752464)
(PMID:18752464)
UniProt
RGD
PMID:18752464 GO_REF:0000024 MGI:5543770 NCBI chr14:67,787,503...67,839,973
Ensembl chr14:67,787,507...67,840,743
JBrowse link
G Cr1l complement C3b/C4b receptor 1 like acts_upstream_of_or_within ISO (MGI:4821502|PMID:20675597) RGD PMID:20675597 MGI:4821502 NCBI chr13:106,606,952...106,660,442
Ensembl chr13:106,574,858...106,660,445
JBrowse link
G Cybb cytochrome b-245 beta chain IEP RGD PMID:21302291 RGD:11040609 NCBI chr  X:13,360,583...13,392,517
Ensembl chr  X:13,359,430...13,392,586
JBrowse link
G Daxx death-domain associated protein IEP RGD PMID:17289031 RGD:9587773 NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 IEP RGD PMID:18664364 RGD:150429768 NCBI chr13:82,193,623...82,318,229
Ensembl chr13:82,195,463...82,317,363
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha IEP RGD PMID:24282625 RGD:9589039 NCBI chr 6:26,791,517...26,902,161
Ensembl chr 6:26,822,609...26,896,687
JBrowse link
G Drd1 dopamine receptor D1 IEP RGD PMID:20969567 RGD:7248614 NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002
JBrowse link
G E2f1 E2F transcription factor 1 IEP RGD PMID:19088195 RGD:2316261 NCBI chr 3:143,064,535...143,075,362
Ensembl chr 3:143,049,478...143,075,361
JBrowse link
G Edn1 endothelin 1 IEP RGD PMID:9551744 RGD:8662285 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Egln1 egl-9 family hypoxia-inducible factor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:52,867,914...52,907,169
Ensembl chr19:52,869,486...52,907,777
JBrowse link
G Egln2 egl-9 family hypoxia-inducible factor 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:82,451,554...82,459,809
Ensembl chr 1:82,451,555...82,459,751
JBrowse link
G Egln3 egl-9 family hypoxia-inducible factor 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:71,650,297...71,675,766
Ensembl chr 6:71,650,297...71,675,766
JBrowse link
G Egr1 early growth response 1 IEP RGD PMID:21220915 RGD:5131857 NCBI chr18:26,463,333...26,465,531
Ensembl chr18:26,462,981...26,466,766
JBrowse link
G Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 IDA RGD PMID:10100614 RGD:10401146 NCBI chr16:64,792,595...64,805,984
Ensembl chr16:64,790,226...64,805,984
JBrowse link
G Eln elastin IEP RGD PMID:16055482 RGD:9585727 NCBI chr12:21,968,544...22,011,929
Ensembl chr12:21,968,544...22,011,928
JBrowse link
G Endog endonuclease G IEP RGD PMID:17379825 RGD:9685412 NCBI chr 3:13,449,113...13,451,715
Ensembl chr 3:13,449,086...13,451,932
JBrowse link
G Eno1 enolase 1 involved_in IDA PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chr 5:160,719,951...160,731,337
Ensembl chr 5:160,719,951...160,731,336
JBrowse link
G Epas1 endothelial PAS domain protein 1 involved_in IEP
IBA
ISO
IEA
ISS
PMID:21873635
(PMID:11573933)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:11573933 PMID:12099714 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:11041576, RGD:13792537 NCBI chr 6:7,790,236...7,871,246
Ensembl chr 6:7,790,647...7,871,228
JBrowse link
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha IEP RGD PMID:12752442 RGD:10401130 NCBI chr15:18,495,037...18,530,440
Ensembl chr15:18,492,945...18,530,478
JBrowse link
G Fabp1 fatty acid binding protein 1 involved_in ISO (PMID:16175609) RGD PMID:16175609 NCBI chr 4:103,191,015...103,194,791
Ensembl chr 4:103,191,006...103,194,788
JBrowse link
G Fam162a family with sequence similarity 162, member A involved_in ISO
IBA
(PMID:15082785)
(MGI:5319611|PMID:17316997)
PMID:21873635
RGD PMID:15082785 PMID:17316997 PMID:21873635 MGI:5319611, RGD:13792537 NCBI chr11:64,680,937...64,711,239
Ensembl chr11:64,680,323...64,711,239
JBrowse link
G Fas Fas cell surface death receptor IEP RGD PMID:12031707 RGD:8663470 NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 IEP RGD PMID:11981751 RGD:634296 NCBI chr12:7,296,899...7,468,626
Ensembl chr12:7,297,292...7,468,626
JBrowse link
G Fmn2 formin 2 involved_in ISO (PMID:23375502) RGD PMID:23375502 NCBI chr13:86,454,256...86,771,437
Ensembl chr13:86,453,926...86,771,411
JBrowse link
G Fndc1 fibronectin type III domain containing 1 acts_upstream_of_or_within IMP PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chr 1:47,281,839...47,364,247
Ensembl chr 1:47,281,844...47,364,259
JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit IEP RGD PMID:8593588 RGD:151347626 NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036
JBrowse link
G Foxo3 forkhead box O3 IEP RGD PMID:24278276 RGD:10402204 NCBI chr20:45,669,708...45,764,606
Ensembl chr20:45,672,995...45,764,561
JBrowse link
G Gata6 GATA binding protein 6 involved_in IEA
ISO
GO_REF:0000107
(PMID:21127043)
Ensembl
RGD
PMID:21127043 GO_REF:0000107 NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
JBrowse link
G Gnb1 G protein subunit beta 1 acts_upstream_of_or_within IDA PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chr 5:166,075,508...166,142,223
Ensembl chr 5:166,075,629...166,142,124
JBrowse link
G Gngt1 G protein subunit gamma transducin 1 acts_upstream_of_or_within IDA PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chr 4:32,006,267...32,009,252
Ensembl chr 4:32,006,267...32,009,252
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within
involved_in
IEP
ISO
ISS
IBA
IMP
MGI:101884|MGI:2676890|MGI:3618742 (MGI:5528778|PMID:24011070)
GO_REF:0000024
(PMID:11573933), (PMID:19528298), (PMID:19782034), (PMID:20810912), (PMID:20889502)
PMID:21873635
RGD
UniProt
PMID:11573933 PMID:19528298 PMID:19782034 PMID:20810912 PMID:20889502 More... GO_REF:0000024 MGI:5528778, RGD:9068456, RGD:13792537, RGD:9068884 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Hif3a hypoxia inducible factor 3 subunit alpha NOT|involved_in ISO
IBA
(PMID:11573933)
PMID:21873635
RGD PMID:11573933 PMID:21873635 RGD:13792537 NCBI chr 1:77,718,110...77,750,448
Ensembl chr 1:77,722,471...77,749,758
JBrowse link
G Higd1a HIG1 hypoxia inducible domain family, member 1A acts_upstream_of_or_within ISO (MGI:3654896|PMID:16815968), (MGI:5306879|PMID:21856340), (MGI:5643884|PMID:25683712) RGD PMID:16815968 PMID:21856340 PMID:25683712 MGI:3654896 MGI:5306879 MGI:5643884 NCBI chr 8:121,514,152...121,523,382
Ensembl chr 8:121,514,156...121,523,443
JBrowse link
G Hilpda hypoxia inducible lipid droplet-associated involved_in ISO (PMID:10690527) RGD PMID:10690527 NCBI chr 4:57,871,076...57,875,206
Ensembl chr 4:57,871,110...57,874,557
JBrowse link
G Hmox1 heme oxygenase 1 involved_in ISO (PMID:12511571) RGD PMID:12511571 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IEP RGD PMID:24177414 RGD:10445837 NCBI chr 3:152,186,787...152,248,320
Ensembl chr 3:152,186,787...152,248,320
JBrowse link
G Hp1bp3 heterochromatin protein 1, binding protein 3 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:25100860)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:25100860 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:150,435,781...150,463,004
Ensembl chr 5:150,433,740...150,463,000
JBrowse link
G Hyou1 hypoxia up-regulated 1 involved_in ISO
IBA
(PMID:10837345), (PMID:9020069)
PMID:21873635
RGD PMID:9020069 PMID:10837345 PMID:21873635 RGD:13792537 NCBI chr 8:44,706,073...44,718,189
Ensembl chr 8:44,706,263...44,718,186
JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP RGD PMID:20631551 RGD:8662392 NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438
JBrowse link
G Il7 interleukin 7 IEP RGD PMID:19055876 RGD:10402937 NCBI chr 2:94,235,219...94,280,075
Ensembl chr 2:94,234,766...94,280,075
JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 IEP RGD PMID:15793310 RGD:1579809 NCBI chr  X:151,768,621...151,778,521
Ensembl chr  X:151,768,777...151,778,521
JBrowse link
G Ireb2 iron responsive element binding protein 2 IEP RGD PMID:22159112 RGD:6893269 NCBI chr 8:55,228,080...55,311,613
Ensembl chr 8:55,228,085...55,311,611
JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor, type 1 IEP RGD PMID:17285299 RGD:6482794 NCBI chr 4:141,187,377...141,554,240
Ensembl chr 4:141,187,418...141,510,491
JBrowse link
G Itpr2 inositol 1,4,5-trisphosphate receptor, type 2 IEP RGD PMID:17285299 RGD:6482794 NCBI chr 4:179,028,594...179,434,657
Ensembl chr 4:179,027,281...179,404,164
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit IEP RGD PMID:8593588 RGD:151347626 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit IEP RGD PMID:8593588 RGD:151347626 NCBI chr19:23,176,265...23,178,049
Ensembl chr19:23,176,294...23,178,035
JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit IEP RGD PMID:8593588 RGD:151347626 NCBI chr16:18,734,121...18,735,799
Ensembl chr16:18,734,122...18,735,799
JBrowse link
G Kcnd2 potassium voltage-gated channel subfamily D member 2 involved_in IDA PMID:25352783 UniProt PMID:25352783 RGD:10047379 NCBI chr 4:49,775,812...50,277,746
Ensembl chr 4:49,776,246...50,277,728
JBrowse link
G Kcnk2 potassium two pore domain channel subfamily K member 2 IEP RGD PMID:24705172 RGD:9831164 NCBI chr13:100,766,101...100,963,435
Ensembl chr13:100,766,113...100,963,435
JBrowse link
G Kcnk3 potassium two pore domain channel subfamily K member 3 IMP RGD PMID:12215606 RGD:2316539 NCBI chr 6:25,761,487...25,799,153
Ensembl chr 6:25,763,228...25,799,153
JBrowse link
G Kcnmb1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 IEP RGD PMID:19461047 RGD:10412041 NCBI chr10:18,557,510...18,614,824
Ensembl chr10:18,557,904...18,565,798
JBrowse link
G Kdm6a lysine demethylase 6A IEP RGD PMID:30887465 RGD:151665136 NCBI chr  X:4,337,466...4,477,100
Ensembl chr  X:4,337,750...4,477,062
JBrowse link
G Lmna lamin A/C involved_in ISO
IEA
(PMID:20810912)
GO_REF:0000107
RGD
Ensembl
PMID:20810912 GO_REF:0000107 NCBI chr 2:173,939,751...173,960,423
Ensembl chr 2:173,939,751...173,960,423
JBrowse link
G LOC120095320 protein FAM162A-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:36,389,447...36,391,357
Ensembl chr10:36,390,113...36,390,613
JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:20810912) RGD PMID:20810912 NCBI chr 7:53,290,660...53,315,205
Ensembl chr 7:53,290,664...53,314,915
JBrowse link
G Mdm4 MDM4 regulator of p53 involved_in ISO (PMID:20810912) RGD PMID:20810912 NCBI chr13:44,432,596...44,516,165
Ensembl chr13:44,406,213...44,474,226
JBrowse link
G Mfn1 mitofusin 1 IEP RGD PMID:27833818 RGD:12910766 NCBI chr 2:115,313,380...115,359,651
Ensembl chr 2:115,313,401...115,359,640
JBrowse link
G Mfn2 mitofusin 2 IEP RGD PMID:28478070 RGD:12910733 NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
JBrowse link
G Mgarp mitochondria-localized glutamic acid-rich protein involved_in ISO (MGI:3850758|PMID:19528298) RGD PMID:19528298 MGI:3850758 NCBI chr 2:135,431,283...135,439,425
Ensembl chr 2:135,431,283...135,439,612
JBrowse link
G Mief1 mitochondrial elongation factor 1 IEP RGD PMID:25911325 RGD:12880381 NCBI chr 7:111,786,630...111,802,220
Ensembl chr 7:111,786,709...111,802,220
JBrowse link
G Mif macrophage migration inhibitory factor IEP RGD PMID:19462902 RGD:4890975 NCBI chr20:12,790,919...12,791,784
Ensembl chr20:12,790,902...12,799,504
JBrowse link
G Mir126b microRNA 126b involved_in ISO (PMID:28578351) RGD PMID:28578351 NCBI chr 3:9,415,087...9,415,159 JBrowse link
G Mir140 microRNA 140 involved_in ISO (PMID:27021683) RGD PMID:27021683 NCBI chr19:35,465,577...35,465,675
Ensembl chr19:35,465,577...35,465,675
JBrowse link
G Mir146a microRNA 146a involved_in ISO (PMID:18801740) RGD PMID:18801740 NCBI chr10:27,848,516...27,848,610
Ensembl chr10:27,848,516...27,848,610
JBrowse link
G Mir17 microRNA 17 involved_in ISO (PMID:27640178) RGD PMID:27640178 NCBI chr15:92,180,629...92,180,712
Ensembl chr15:92,180,629...92,180,712
JBrowse link
G Mir199a2 microRNA 199a-2 acts_upstream_of_or_within ISO MGI:101884|MGI:106918|MGI:2676890 (MGI:5528778|PMID:24011070) RGD PMID:24011070 MGI:5528778 NCBI chr13:74,582,954...74,583,063
Ensembl chr13:74,582,954...74,583,063
JBrowse link
G Mir214 microRNA 214 acts_upstream_of_or_within
involved_in
ISO MGI:101884|MGI:106918|MGI:3618742 (MGI:5528778|PMID:24011070)
(PMID:27144530)
RGD PMID:24011070 PMID:27144530 MGI:5528778 NCBI chr13:74,588,374...74,588,481
Ensembl chr13:74,588,372...74,588,481
JBrowse link
G Mir222 microRNA 222 IEP RGD PMID:28854428 RGD:152025191 NCBI chr  X:3,428,904...3,429,006
Ensembl chr  X:3,428,904...3,429,006
JBrowse link
G Mir223 microRNA 223 IEP RGD PMID:29608885 RGD:21408565 NCBI chr  X:61,141,887...61,141,996
Ensembl chr  X:61,141,887...61,141,996
JBrowse link
G Mir34a microRNA 34a involved_in ISO (PMID:27302634) RGD PMID:27302634 NCBI chr 5:160,533,002...160,533,103
Ensembl chr 5:160,533,002...160,533,103
JBrowse link
G Mir448 microRNA 448 involved_in ISO (PMID:33108349) RGD PMID:33108349 NCBI chr  X:110,829,918...110,830,029
Ensembl chr  X:110,829,918...110,830,029
JBrowse link
G Mpl MPL proto-oncogene, thrombopoietin receptor IEP RGD PMID:15642952 RGD:10449018 NCBI chr 5:131,973,897...131,987,472
Ensembl chr 5:131,973,895...131,986,797
JBrowse link
G Mst1 macrophage stimulating 1 IEP RGD PMID:23647599 RGD:10448278 NCBI chr 8:108,767,886...108,773,425
Ensembl chr 8:108,768,839...108,773,416
JBrowse link
G Mt3 metallothionein 3 involved_in ISO (PMID:18206644) RGD PMID:18206644 NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISS
ISO
GO_REF:0000024
(MGI:3654795|PMID:16915281)
UniProt
RGD
PMID:16915281 GO_REF:0000024 MGI:3654795 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISO (PMID:15459207) RGD PMID:15459207 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Myocd myocardin IEP RGD PMID:20621093 RGD:5132874 NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
JBrowse link
G Ndnf neuron-derived neurotrophic factor involved_in ISO (PMID:24706764) RGD PMID:24706764 NCBI chr 4:94,944,749...94,987,414
Ensembl chr 4:94,944,360...94,981,873
JBrowse link
G Ndrg1 N-myc downstream regulated 1 involved_in ISO
IEA
(PMID:20810912)
GO_REF:0000107
RGD
Ensembl
PMID:20810912 GO_REF:0000107 NCBI chr 7:98,684,487...98,725,869
Ensembl chr 7:98,684,487...98,725,880
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 IEP RGD PMID:23904790 RGD:10412703 NCBI chr 3:60,594,239...60,621,785
Ensembl chr 3:60,594,242...60,621,737
JBrowse link
G Nkx3-1 NK3 homeobox 1 involved_in ISO (PMID:21056661) RGD PMID:21056661 NCBI chr15:44,473,851...44,476,443
Ensembl chr15:44,473,851...44,476,441
JBrowse link
G Nog noggin IEP RGD PMID:25740156 RGD:12801489 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
JBrowse link
G Nol3 nucleolar protein 3 involved_in IDA PMID:22082675 UniProt PMID:22082675 RGD:10047303 NCBI chr19:33,154,061...33,158,250
Ensembl chr19:33,154,062...33,158,250
JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:22522597) RGD PMID:22522597 NCBI chr 1:76,629,084...76,636,902
Ensembl chr 1:76,629,069...76,636,902
JBrowse link
G Notch1 notch receptor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5319604|PMID:18299578)
UniProt
RGD
PMID:18299578 GO_REF:0000024 MGI:5319604 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Npepps aminopeptidase puromycin sensitive involved_in ISO (PMID:21056661) RGD PMID:21056661 NCBI chr10:82,191,454...82,273,967
Ensembl chr10:82,191,456...82,273,967
JBrowse link
G Npm1 nucleophosmin 1 IEP RGD PMID:21444791 RGD:11535018 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
JBrowse link
G Opa1 OPA1, mitochondrial dynamin like GTPase IEP RGD PMID:27833818 RGD:12910766 NCBI chr11:71,108,100...71,185,170
Ensembl chr11:71,109,873...71,185,109
JBrowse link
G Oprd1 opioid receptor, delta 1 involved_in ISO (PMID:24613828) RGD PMID:24613828 NCBI chr 5:144,306,188...144,340,960
Ensembl chr 5:144,306,188...144,340,960
JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta involved_in ISO (PMID:12095988) RGD PMID:12095988 NCBI chr10:105,836,972...105,848,583
Ensembl chr10:105,836,982...105,848,500
JBrowse link
G Palld palladin, cytoskeletal associated protein IEP RGD PMID:16481593 RGD:2325785 NCBI chr16:28,228,006...28,621,349
Ensembl chr16:27,981,354...28,621,337
JBrowse link
G Park7 Parkinsonism associated deglycase IEP RGD PMID:29069575 RGD:151347449 NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970
JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 IEP RGD PMID:24177414 RGD:10445837 NCBI chr 3:161,930,256...161,936,205
Ensembl chr 3:161,930,256...161,936,191
JBrowse link
G Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 IEP RGD PMID:23647599 RGD:10448278 NCBI chr 1:2,111,756...2,160,354
Ensembl chr 1:2,111,763...2,159,201
JBrowse link
G Pgk1 phosphoglycerate kinase 1 involved_in ISO (PMID:11130727) RGD PMID:11130727 NCBI chr  X:71,271,454...71,287,429
Ensembl chr  X:71,271,440...71,287,418
JBrowse link
G Phb2 prohibitin 2 IEP RGD PMID:25031298 RGD:12903263 NCBI chr 4:157,517,662...157,522,268
Ensembl chr 4:157,517,577...157,522,272
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:24553947)
(MGI:5558956|PMID:24553947)
RGD PMID:24553947 MGI:5558956 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
JBrowse link
G Plau plasminogen activator, urokinase IEP RGD PMID:19490965 RGD:7241802 NCBI chr15:3,456,230...3,462,732
Ensembl chr15:3,456,232...3,462,775
JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in ISO (PMID:14699081), (PMID:20810912) RGD PMID:14699081 PMID:20810912 NCBI chr18:59,986,187...59,990,174
Ensembl chr18:59,986,017...59,992,429
JBrowse link
G Ppard peroxisome proliferator-activated receptor delta acts_upstream_of_or_within ISO MGI:106918|MGI:2676890|MGI:3618742 (MGI:5528778|PMID:24011070) RGD PMID:24011070 MGI:5528778 NCBI chr20:6,298,785...6,363,970
Ensembl chr20:6,298,785...6,363,968
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma involved_in IDA PMID:29695452 BHF-UCL PMID:29695452 RGD:150521636 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:22527940 RGD:7242177 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 IEP RGD PMID:17720864 RGD:2316813 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Prkce protein kinase C, epsilon acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3776183|PMID:18070622)
GO_REF:0000107
RGD
Ensembl
PMID:18070622 GO_REF:0000107 MGI:3776183 NCBI chr 6:7,965,048...8,451,966
Ensembl chr 6:7,965,048...8,451,719
JBrowse link
G Prl prolactin involved_in ISO (PMID:24530842) RGD PMID:24530842 NCBI chr17:37,859,999...37,870,062
Ensembl chr17:37,860,007...37,870,062
JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within ISO (MGI:5584033|PMID:24875179) RGD PMID:24875179 MGI:5584033 NCBI chr 1:230,631,303...230,696,754
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
G Ptgis prostaglandin I2 synthase involved_in ISS
ISO
GO_REF:0000024
(PMID:21296955)
UniProt
RGD
PMID:21296955 GO_REF:0000024 NCBI chr 3:155,928,564...155,964,228
Ensembl chr 3:155,916,412...155,965,451
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in ISO (PMID:21296955) RGD PMID:21296955 NCBI chr13:62,164,080...62,169,770
Ensembl chr13:62,163,932...62,172,188
JBrowse link
G Ptn pleiotrophin IEP RGD PMID:16226713 PMID:17925408 RGD:9834996, RGD:10044023 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
JBrowse link
G Rgcc regulator of cell cycle involved_in ISO (PMID:19652095) RGD PMID:19652095 NCBI chr15:54,662,483...54,675,320
Ensembl chr15:54,662,483...54,681,141
JBrowse link
G Rnf146 ring finger protein 146 IEP RGD PMID:26218637 RGD:13524866 NCBI chr 1:28,458,864...28,475,758
Ensembl chr 1:28,458,887...28,475,923
JBrowse link
G Rora RAR-related orphan receptor A involved_in ISO (PMID:18658046) RGD PMID:18658046 NCBI chr 8:69,301,635...70,034,741
Ensembl chr 8:69,301,733...70,025,931
JBrowse link
G Rtn4 reticulon 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:6274961|PMID:27763637)
UniProt
RGD
PMID:27763637 GO_REF:0000024 MGI:6274961 NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
JBrowse link
G S100b S100 calcium binding protein B IEP RGD PMID:19910580 RGD:2325647 NCBI chr20:12,372,866...12,381,619
Ensembl chr20:12,372,881...12,394,743
JBrowse link
G Scn2a sodium voltage-gated channel alpha subunit 2 involved_in IDA PMID:28029095 UniProt PMID:28029095 RGD:14390052 NCBI chr 3:50,302,781...50,437,504
Ensembl chr 3:50,302,877...50,437,214
JBrowse link
G Sdhd succinate dehydrogenase complex subunit D acts_upstream_of_or_within ISO MGI:3526521 (MGI:3525749|PMID:15572694) RGD PMID:15572694 MGI:3525749 NCBI chr 8:50,944,717...50,954,298
Ensembl chr 8:50,944,704...50,954,238
JBrowse link
G Serpine1 serpin family E member 1 IEP RGD PMID:10590062 RGD:8547811 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in ISO
IEA
(PMID:11932307)
GO_REF:0000107
RGD
Ensembl
PMID:11932307 GO_REF:0000107 NCBI chr16:68,575,763...68,613,905
Ensembl chr16:68,575,763...68,614,286
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:20620956) RGD PMID:20620956 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Sirt2 sirtuin 2 involved_in ISO
ISS
(PMID:24681946)
GO_REF:0000024
RGD
UniProt
PMID:24681946 GO_REF:0000024 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
JBrowse link
G Sirt4 sirtuin 4 IEP RGD PMID:24029877 RGD:9586053 NCBI chr12:41,125,533...41,139,440
Ensembl chr12:41,131,262...41,139,439
JBrowse link
G Slc11a2 solute carrier family 11 member 2 IEP RGD PMID:21325818 RGD:5688411 NCBI chr 7:131,503,076...131,540,246
Ensembl chr 7:131,503,081...131,540,145
JBrowse link
G Slc29a1 solute carrier family 29 member 1 IEP RGD PMID:10646513 RGD:1598899 NCBI chr 9:15,399,661...15,414,203
Ensembl chr 9:15,399,612...15,414,203
JBrowse link
G Slc2a4 solute carrier family 2 member 4 IDA RGD PMID:20868366 RGD:7349316 NCBI chr10:54,666,015...54,671,581
Ensembl chr10:54,666,015...54,671,565
JBrowse link
G Slc8a1 solute carrier family 8 member A1 IEP RGD PMID:17394575 RGD:1642726 NCBI chr 6:13,194,609...13,547,369
Ensembl chr 6:13,194,662...13,535,628
JBrowse link
G Slc8a3 solute carrier family 8 member A3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5693358|PMID:24101730)
UniProt
RGD
PMID:24101730 GO_REF:0000024 MGI:5693358 NCBI chr 6:100,874,359...101,007,989
Ensembl chr 6:100,874,369...101,007,508
JBrowse link
G Slc9a1 solute carrier family 9 member A1 IDA RGD PMID:20868366 RGD:7349316 NCBI chr 5:145,576,341...145,629,630
Ensembl chr 5:145,576,334...145,629,624
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase IEP RGD PMID:20380727 RGD:2324980 NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
JBrowse link
G Stc1 stanniocalcin 1 IEP RGD PMID:15485913 RGD:2324700 NCBI chr15:44,299,591...44,311,695
Ensembl chr15:44,299,621...44,310,264
JBrowse link
G Stc2 stanniocalcin 2 IEP RGD PMID:15485913 RGD:2324700 NCBI chr10:16,251,046...16,260,815
Ensembl chr10:16,250,853...16,262,973
JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in IDA PMID:19953350 ARUK-UCL PMID:19953350 RGD:13507303 NCBI chr10:14,850,765...14,853,046
Ensembl chr10:14,850,765...14,853,046
JBrowse link
G Sumo1 small ubiquitin-like modifier 1 IEP RGD PMID:17289031 RGD:9587773 NCBI chr 9:61,078,790...61,108,697
Ensembl chr 9:61,077,435...61,108,761
JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase acts_upstream_of_or_within ISO (PMID:21402781) RGD PMID:21402781 NCBI chr  X:14,421,028...14,434,216
Ensembl chr  X:14,421,109...14,433,982
JBrowse link
G Suv39h1-ps1 SUV39H1 histone lysine methyltransferase, pseudogene 1 acts_upstream_of_or_within ISO (PMID:21402781) RGD PMID:21402781 NCBI chr  X:141,793,695...141,795,558 JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase acts_upstream_of_or_within ISO (PMID:21402781) RGD PMID:21402781 NCBI chr17:74,756,290...74,775,332
Ensembl chr17:74,756,306...74,775,332
JBrowse link
G Tbl2 transducin (beta)-like 2 involved_in ISO (PMID:25393282) RGD PMID:25393282 NCBI chr12:21,517,600...21,532,114
Ensembl chr12:21,520,682...21,531,896
JBrowse link
G Terc telomerase RNA component involved_in ISO (PMID:11313459) RGD PMID:11313459 NCBI chr 2:112,815,654...112,816,041 JBrowse link
G Tert telomerase reverse transcriptase involved_in IEP
ISO
(PMID:11313459) RGD PMID:11313459 PMID:24376652 RGD:11038675 NCBI chr 1:29,637,213...29,659,509
Ensembl chr 1:29,637,506...29,659,561
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase involved_in ISO (PMID:23185017) RGD PMID:23185017 NCBI chr 4:159,927,138...159,946,094
Ensembl chr 4:159,927,139...159,946,029
JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 IEP RGD PMID:28854428 RGD:152025191 NCBI chr 7:17,520,827...17,571,871
Ensembl chr 7:17,521,919...17,571,839
JBrowse link
G Tp53 tumor protein p53 involved_in ISO
IEP
(PMID:20810912) RGD PMID:20810912 PMID:17289031 RGD:9587773 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IEP PMID:31900229 ARUK-UCL PMID:31900229 RGD:126781734 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
JBrowse link
G Trpc1 transient receptor potential cation channel, subfamily C, member 1 IEP RGD PMID:19889962 RGD:7247600 NCBI chr 8:96,263,322...96,314,197
Ensembl chr 8:96,263,329...96,314,276
JBrowse link
G Trpc6 transient receptor potential cation channel, subfamily C, member 6 IEP RGD PMID:19889962 RGD:7247600 NCBI chr 8:5,759,387...5,864,000
Ensembl chr 8:5,758,935...5,828,092
JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (PMID:18297062)
(MGI:5284765|PMID:18297062)
RGD PMID:18297062 MGI:5284765 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
JBrowse link
G Ubqln1 ubiquilin 1 involved_in ISO
ISS
IEA
(PMID:12095988)
GO_REF:0000024
GO_REF:0000107
RGD
HGNC
Ensembl
PMID:12095988 GO_REF:0000024 GO_REF:0000107 NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090
JBrowse link
G Ucn2 urocortin 2 IEP RGD PMID:14519439 RGD:2306174 NCBI chr 8:109,637,624...109,639,173
Ensembl chr 8:109,638,285...109,639,172
JBrowse link
G Ucn3 urocortin 3 IEP RGD PMID:14519439 RGD:2306174 NCBI chr17:66,309,952...66,315,571
Ensembl chr17:66,309,371...66,315,990
JBrowse link
G Vasn vasorin acts_upstream_of_or_within ISO MGI:5140849 (MGI:5014460|PMID:21658601) RGD PMID:21658601 MGI:5014460 NCBI chr10:10,917,750...10,928,259
Ensembl chr10:10,917,605...10,928,357
JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO (PMID:10575000) RGD PMID:10575000 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
G Vldlr very low density lipoprotein receptor IDA RGD PMID:19233325 RGD:2324641 NCBI chr 1:224,813,539...224,850,400
Ensembl chr 1:224,814,377...224,845,920
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 involved_in ISO
ISS
(PMID:21832157)
GO_REF:0000024
RGD
UniProt
PMID:21832157 GO_REF:0000024 NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
JBrowse link
cellular response to increased oxygen levels term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap1 ATPase H+ transporting accessory protein 1 involved_in ISO
ISS
IEA
(PMID:28296633)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:28296633 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:152,079,954...152,087,034
Ensembl chr  X:152,079,865...152,087,034
JBrowse link
G Atp6v0a2 ATPase H+ transporting V0 subunit a2 involved_in ISO (PMID:28296633) RGD PMID:28296633 NCBI chr12:31,949,863...31,979,777
Ensembl chr12:31,822,733...32,007,069
JBrowse link
G Atp6v0d1 ATPase H+ transporting V0 subunit D1 involved_in ISO (PMID:28296633) RGD PMID:28296633 NCBI chr19:33,403,352...33,447,357
Ensembl chr19:33,403,355...33,447,450
JBrowse link
G Atp6v1a ATPase H+ transporting V1 subunit A involved_in ISO (PMID:28296633) RGD PMID:28296633 NCBI chr11:56,561,444...56,614,694
Ensembl chr11:56,560,974...56,614,694
JBrowse link
G Atp6v1g1 ATPase H+ transporting V1 subunit G1 involved_in ISO (PMID:28296633) RGD PMID:28296633 NCBI chr 5:76,961,462...76,967,642
Ensembl chr 5:76,961,499...76,969,463
JBrowse link
G Ccdc115 coiled-coil domain containing 115 involved_in ISO (PMID:28296633) RGD PMID:28296633 NCBI chr 9:36,650,384...36,654,348
Ensembl chr 9:36,649,271...36,653,946
JBrowse link
G Lcn2 lipocalin 2 IEP RGD PMID:24916903 RGD:126790489 NCBI chr 3:15,680,688...15,684,033
Ensembl chr 3:15,680,687...15,684,095
JBrowse link
G Tmem199 transmembrane protein 199 involved_in ISO
ISS
(PMID:28296633)
GO_REF:0000024
RGD
UniProt
PMID:28296633 GO_REF:0000024 NCBI chr10:63,402,493...63,407,065
Ensembl chr10:63,402,494...63,407,108
JBrowse link
cellular response to oxygen-glucose deprivation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aifm1 apoptosis inducing factor, mitochondria associated 1 IEP RGD PMID:14526224 RGD:10047409 NCBI chr  X:127,650,223...127,689,356
Ensembl chr  X:127,650,226...127,689,256
JBrowse link
G Aqp3 aquaporin 3 (Gill blood group) involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5551666|PMID:24462679)
Ensembl
RGD
PMID:24462679 GO_REF:0000107 MGI:5551666 NCBI chr 5:56,239,200...56,244,718
Ensembl chr 5:56,239,201...56,244,720
JBrowse link
G Atf4 activating transcription factor 4 IEP RGD PMID:20444431 RGD:13464322 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
JBrowse link
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 IEP RGD PMID:23421680 RGD:13514095 NCBI chr 7:129,784,799...129,797,074
Ensembl chr 7:129,783,674...129,797,074
JBrowse link
G Cbl Cbl proto-oncogene IEP RGD PMID:24229686 RGD:11038824 NCBI chr 8:44,487,824...44,571,620
Ensembl chr 8:44,489,410...44,571,176
JBrowse link
G Dicer1 dicer 1 ribonuclease III IEP RGD PMID:26294080 RGD:11553310 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Dnm1l dynamin 1-like IEP RGD PMID:23658809 RGD:12738215 NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482
JBrowse link
G Ireb2 iron responsive element binding protein 2 IDA RGD PMID:16135072 RGD:12904046 NCBI chr 8:55,228,080...55,311,613
Ensembl chr 8:55,228,085...55,311,611
JBrowse link
G Lcn2 lipocalin 2 IEP RGD PMID:24916903 RGD:126790489 NCBI chr 3:15,680,688...15,684,033
Ensembl chr 3:15,680,687...15,684,095
JBrowse link
G Mfn1 mitofusin 1 IEP RGD PMID:23658809 RGD:12738215 NCBI chr 2:115,313,380...115,359,651
Ensembl chr 2:115,313,401...115,359,640
JBrowse link
G Mfn2 mitofusin 2 IEP RGD PMID:23658809 RGD:12738215 NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
JBrowse link
G Mir107 microRNA 107 IEP RGD PMID:26294080 RGD:11553310 NCBI chr 1:232,337,767...232,337,853
Ensembl chr 1:232,337,767...232,337,853
JBrowse link
G Mir874 microRNA 874 acts_upstream_of_or_within ISO (MGI:5551666|PMID:24462679) RGD PMID:24462679 MGI:5551666 NCBI chr17:6,620,649...6,620,724
Ensembl chr17:6,620,649...6,620,724
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase IEP RGD PMID:28528966 RGD:13781879 NCBI chr 6:49,425,316...49,462,109
Ensembl chr 6:49,424,332...49,462,100
JBrowse link
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A IEP RGD PMID:21525936 RGD:10054236 NCBI chr 1:96,000,053...96,003,128
Ensembl chr 1:96,000,058...96,003,171
JBrowse link
G Tsc1 TSC complex subunit 1 involved_in IMP PMID:23435171 ParkinsonsUK-UCL PMID:23435171 RGD:10448950 NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
JBrowse link
hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cybb cytochrome b-245 beta chain IMP RGD PMID:21302291 RGD:11040609 NCBI chr  X:13,360,583...13,392,517
Ensembl chr  X:13,359,430...13,392,586
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:60478|PMID:8470821)
Ensembl
RGD
PMID:8470821 GO_REF:0000107 MGI:60478 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Mir210 microRNA 210 involved_in ISO (PMID:19782034) RGD PMID:19782034 NCBI chr 1:196,326,343...196,326,452
Ensembl chr 1:196,326,337...196,326,454
JBrowse link
G Pdk1 pyruvate dehydrogenase kinase 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:21763680)
UniProt
Ensembl
RGD
PMID:21763680 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:56,705,824...56,733,040
Ensembl chr 3:56,705,871...56,733,038
JBrowse link
G Pdk3 pyruvate dehydrogenase kinase 3 involved_in ISO (PMID:18718909) RGD PMID:18718909 NCBI chr  X:58,477,471...58,553,932
Ensembl chr  X:58,486,554...58,553,557
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of ISO MGI:2136645|MGI:3608931 (MGI:5618205|PMID:25186293) RGD PMID:25186293 MGI:5618205 NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
JBrowse link
intrinsic apoptotic signaling pathway in response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in ISO MGI:1857283 (MGI:3700897|PMID:17189429) RGD PMID:17189429 MGI:3700897 NCBI chr 3:58,718,323...58,795,280
Ensembl chr 3:58,718,332...58,795,236
JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in ISO (PMID:20436456) RGD PMID:20436456 NCBI chr 1:193,708,164...193,725,348
Ensembl chr 1:193,708,167...193,725,359
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:4867601|PMID:20935145) RGD PMID:20935145 MGI:4867601 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
negative regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd34 CD34 molecule involved_in ISO
ISS
(PMID:17505307)
GO_REF:0000024
RGD
UniProt
PMID:17505307 GO_REF:0000024 NCBI chr13:106,480,074...106,499,462
Ensembl chr13:106,480,043...106,499,832
JBrowse link
G Ddah1 dimethylarginine dimethylaminohydrolase 1 involved_in ISO (PMID:24895913) RGD PMID:24895913 NCBI chr 2:234,667,499...234,800,322
Ensembl chr 2:234,667,491...234,799,339
JBrowse link
G Epha4 Eph receptor A4 acts_upstream_of_or_within ISO (PMID:31150684) RGD PMID:31150684 NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase IMP RGD PMID:18539296 RGD:9590185 NCBI chr  X:66,771,278...66,816,148
Ensembl chr  X:66,771,349...66,816,146
JBrowse link
negative regulation of hypoxia-induced intrinsic apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eno1 enolase 1 involved_in ISO UniProtKB:Q01986 (PMID:15459207) RGD PMID:15459207 NCBI chr 5:160,719,951...160,731,337
Ensembl chr 5:160,719,951...160,731,336
JBrowse link
G Hyou1 hypoxia up-regulated 1 involved_in IBA
ISO
IDA
PMID:21873635
(PMID:10037731)
PMID:11231630
RGD PMID:10037731 PMID:21873635 PMID:11231630 RGD:13792537, RGD:10047348 NCBI chr 8:44,706,073...44,718,189
Ensembl chr 8:44,706,263...44,718,186
JBrowse link
G Kdm6a lysine demethylase 6A IMP RGD PMID:30887465 RGD:151665136 NCBI chr  X:4,337,466...4,477,100
Ensembl chr  X:4,337,750...4,477,062
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in IGI
IMP
PMID:15459207 CAFA PMID:15459207 PMID:15459207 RGD:12793039, RGD:12793039 NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
JBrowse link
G Nol3 nucleolar protein 3 involved_in IDA PMID:10590251 UniProt PMID:10590251 RGD:10047155 NCBI chr19:33,154,061...33,158,250
Ensembl chr19:33,154,062...33,158,250
JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta involved_in IEA
ISO
GO_REF:0000107
(MGI:6444553|PMID:30496354)
Ensembl
RGD
PMID:30496354 GO_REF:0000107 MGI:6444553 NCBI chr 8:99,594,600...99,699,772
Ensembl chr 8:99,594,644...99,699,663
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (MGI:5558956|PMID:24553947) RGD PMID:24553947 MGI:5558956 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 involved_in ISO (PMID:21075086) RGD PMID:21075086 NCBI chr 7:130,512,428...130,543,637
Ensembl chr 7:130,527,316...130,543,633
JBrowse link
negative regulation of hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Commd1 copper metabolism domain containing 1 acts_upstream_of_or_within ISO MGI:3714157 (MGI:3713589|PMID:17371845) RGD PMID:17371845 MGI:3713589 NCBI chr14:96,880,463...96,984,494
Ensembl chr14:96,880,463...96,984,501
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO MGI:2136645|MGI:3608931 (MGI:5618205|PMID:25186293) RGD PMID:25186293 MGI:5618205 NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
JBrowse link
negative regulation of transcription from RNA polymerase II promoter in response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in ISO (PMID:22735262) RGD PMID:22735262 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
JBrowse link
G Hif1an hypoxia inducible factor 1 subunit alpha inhibitor involved_in IBA
ISO
PMID:21873635
(PMID:11641274)
RGD PMID:11641274 PMID:21873635 RGD:13792537 NCBI chr 1:243,419,175...243,440,464
Ensembl chr 1:243,419,194...243,434,327
JBrowse link
G Sirt2 sirtuin 2 involved_in ISO
ISS
(PMID:24681946)
GO_REF:0000024
RGD
UniProt
PMID:24681946 GO_REF:0000024 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor involved_in ISO (PMID:11641274) RGD PMID:11641274 NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
JBrowse link
positive regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ep300 E1A binding protein p300 IMP reduced metabolism in hypoxia-treated PC12 cells
reduced metabolism in hypoxia mimic CoCl2-treated PC12 cells
RGD PMID:19103185 PMID:18586071 RGD:2311713, RGD:2311718 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088
JBrowse link
G Kcnk2 potassium two pore domain channel subfamily K member 2 IMP RGD PMID:24705172 RGD:9831164 NCBI chr13:100,766,101...100,963,435
Ensembl chr13:100,766,113...100,963,435
JBrowse link
G Mir145 microRNA 145 acts_upstream_of_or_within ISO (PMID:31150684) RGD PMID:31150684 NCBI chr18:55,099,640...55,099,727
Ensembl chr18:55,099,640...55,099,727
JBrowse link
positive regulation of hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rwdd3 RWD domain containing 3 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000002
(MGI:5569907|PMID:22009797)
(PMID:23469069)
UniProt
InterPro
RGD
PMID:22009797 PMID:23469069 GO_REF:0000002 GO_REF:0000024 MGI:5569907 NCBI chr 2:209,233,622...209,254,842
Ensembl chr 2:209,233,622...209,248,853
JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plk3 polo-like kinase 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:20889502)
UniProt
RGD
PMID:20889502 GO_REF:0000024 NCBI chr 5:130,607,142...130,612,317
Ensembl chr 5:130,607,142...130,612,317
JBrowse link
G Sirt2 sirtuin 2 involved_in ISO
ISS
(PMID:24681946)
GO_REF:0000024
RGD
UniProt
PMID:24681946 GO_REF:0000024 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
JBrowse link
positive regulation of transcription from RNA polymerase II promoter in response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:19652095), (PMID:22735262), (PMID:24681946)
UniProt
Ensembl
RGD
PMID:19652095 PMID:22735262 PMID:24681946 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in ISO (PMID:24844779) RGD PMID:24844779 NCBI chr 3:60,594,239...60,621,785
Ensembl chr 3:60,594,242...60,621,737
JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:5319604|PMID:18299578) RGD PMID:18299578 MGI:5319604 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in ISO (PMID:23303788) RGD PMID:23303788 NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:4867601|PMID:20935145) RGD PMID:20935145 MGI:4867601 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO (PMID:19652095) RGD PMID:19652095 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ajuba ajuba LIM protein involved_in ISO (PMID:22286099) RGD PMID:22286099 NCBI chr15:28,019,775...28,031,537
Ensembl chr15:28,019,778...28,030,021
JBrowse link
G Chchd2l3 coiled-coil-helix-coiled-coil-helix domain containing protein 2-like 3 involved_in ISO (PMID:23303788) RGD PMID:23303788 NCBI chr 9:94,500,439...94,501,110
NCBI chr 9:94,500,629...94,501,122
Ensembl chr 9:94,500,432...94,501,128
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEP RGD PMID:18054269 RGD:9068899 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Mir210 microRNA 210 involved_in ISO (PMID:20436681), (PMID:26780211) RGD PMID:20436681 PMID:26780211 NCBI chr 1:196,326,343...196,326,452
Ensembl chr 1:196,326,337...196,326,454
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in ISO (MGI:6271078|PMID:29353861) RGD PMID:29353861 MGI:6271078 NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031
JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in ISO
IEA
ISS
(PMID:22128162)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:22128162 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:109,190,727...109,201,761
Ensembl chr 8:109,190,724...109,201,741
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor involved_in ISO (PMID:10205047) RGD PMID:10205047 NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
JBrowse link
regulation of transcription from RNA polymerase II promoter in response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bach1 BTB domain and CNC homolog 1 involved_in ISO (PMID:12511571) RGD PMID:12511571 NCBI chr11:26,939,429...26,974,876
Ensembl chr11:26,939,480...26,972,447
JBrowse link
G Egr1 early growth response 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3847400|PMID:18323529)
Ensembl
RGD
PMID:18323529 GO_REF:0000107 MGI:3847400 NCBI chr18:26,463,333...26,465,531
Ensembl chr18:26,462,981...26,466,766
JBrowse link
G Stox1 storkhead box 1 involved_in ISO (PMID:24738702) RGD PMID:24738702 NCBI chr20:30,598,656...30,666,371
Ensembl chr20:30,598,168...30,666,939
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20094
    response to stimulus 10534
      response to abiotic stimulus 1572
        response to oxygen levels 564
          cellular response to oxygen levels 256
            cellular response to decreased oxygen levels + 236
            cellular response to increased oxygen levels + 18
paths to the root