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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to oxygen levels
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Accession:GO:0071453 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of oxygen.
Synonyms:related_synonym: cellular response to oxygen


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cellular response to oxygen levels term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lpar1 lysophosphatidic acid receptor 1 IEP RGD PMID:18978343 RGD:2317687 NCBI chr 5:75,557,038...75,678,067
Ensembl chr 5:75,557,042...75,676,584
JBrowse link
G Myod1 myogenic differentiation 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3840749|PMID:19319192)
Ensembl
RGD
PMID:19319192 GO_REF:0000107 MGI:3840749 NCBI chr 1:102,396,538...102,399,248
Ensembl chr 1:102,396,538...102,399,248
JBrowse link
G Ndufs2 NADH:ubiquinone oxidoreductase core subunit S2 involved_in ISO
IMP
(PMID:30922174)
(MGI:6208149|PMID:29887397), (MGI:6220487|PMID:26437605), (MGI:6442705|PMID:30922174)
RGD PMID:26437605 PMID:29887397 PMID:30922174, PMID:30922174 MGI:6208149 MGI:6220487 MGI:6442705, RGD:42722001 NCBI chr13:89,606,848...89,623,506
Ensembl chr13:89,606,840...89,619,398
JBrowse link
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 acts_upstream_of_or_within ISO MGI:3527173 (MGI:6220487|PMID:26437605) RGD PMID:26437605 MGI:6220487 NCBI chr 2:46,372,488...46,476,162
Ensembl chr 2:46,372,518...46,476,203
JBrowse link
G Polr2a RNA polymerase II subunit A IEP RGD PMID:19095046 RGD:9681725 NCBI chr10:56,339,277...56,364,888
Ensembl chr10:56,339,284...56,365,084
JBrowse link
G Pou4f2 POU class 4 homeobox 2 involved_in IMP PMID:25356872 BHF-UCL PMID:25356872 RGD:13792547 NCBI chr19:33,160,180...33,163,821
Ensembl chr19:33,160,180...33,163,821
JBrowse link
G Uck2 uridine-cytidine kinase 2 IEP RGD PMID:2164139 RGD:2317209 NCBI chr13:85,376,716...85,443,976
Ensembl chr13:85,376,716...85,443,976
JBrowse link
cellular response to anoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cftr CF transmembrane conductance regulator IEP RGD PMID:14975182 RGD:1599599 NCBI chr 4:42,693,263...42,860,679
Ensembl chr 4:42,692,836...42,860,676
JBrowse link
G Daxx death-domain associated protein IEP RGD PMID:17289031 RGD:9587773 NCBI chr20:5,480,103...5,485,962
Ensembl chr20:5,480,103...5,485,926
JBrowse link
G Eef2k eukaryotic elongation factor-2 kinase IEP RGD PMID:12194824 RGD:8553742 NCBI chr 1:190,780,211...190,839,926
Ensembl chr 1:190,780,236...190,842,324
JBrowse link
cellular response to decreased oxygen levels term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 acts_upstream_of_or_within ISO (MGI:5584033|PMID:24875179) RGD PMID:24875179 MGI:5584033 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Cpeb4 cytoplasmic polyadenylation element binding protein 4 involved_in IDA PMID:20937770 UniProt PMID:20937770 RGD:8553637 NCBI chr10:15,984,520...16,047,209
Ensembl chr10:15,987,921...16,046,033
JBrowse link
G Mir106a microRNA 106a acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr  X:140,117,891...140,117,968
Ensembl chr  X:140,117,891...140,117,968
JBrowse link
G Mir142 microRNA 142 acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr10:75,050,839...75,050,925
Ensembl chr10:75,050,832...75,050,942
JBrowse link
G Mir146a microRNA 146a acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr10:28,962,476...28,962,570
Ensembl chr10:28,962,476...28,962,570
JBrowse link
G Mir150 microRNA 150 acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr 1:101,115,974...101,116,058
Ensembl chr 1:101,115,974...101,116,058
JBrowse link
G Mir15b microRNA 15b acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr 2:165,605,923...165,606,020
Ensembl chr 2:165,605,923...165,606,020
JBrowse link
G Mir17 microRNA 17 acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr15:100,179,879...100,179,962
Ensembl chr15:100,179,879...100,179,962
JBrowse link
G Mir199a2 microRNA 199a-2 acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr13:80,125,487...80,125,596
Ensembl chr13:80,125,487...80,125,596
JBrowse link
G Mir204 microRNA 204 acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr 1:240,403,000...240,403,109
Ensembl chr 1:240,403,000...240,403,109
JBrowse link
G Mir20b microRNA 20b acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr  X:140,117,518...140,117,589
Ensembl chr  X:140,117,518...140,117,589
JBrowse link
G Mir21 microRNA 21 acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr10:73,902,210...73,902,301
Ensembl chr10:73,902,210...73,902,301
JBrowse link
G Mir221 microRNA 221 acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr  X:3,684,480...3,684,588
Ensembl chr  X:3,684,480...3,684,588
JBrowse link
G Mir222 microRNA 222 acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr  X:3,683,919...3,684,021
Ensembl chr  X:3,683,919...3,684,021
JBrowse link
G Mir223 microRNA 223 acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr  X:65,367,812...65,367,921
Ensembl chr  X:65,367,812...65,367,921
JBrowse link
G Mir31 microRNA 31 acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr 5:107,206,515...107,206,620 JBrowse link
G Mir499a microRNA 499a acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr 3:151,138,862...151,138,926
Ensembl chr 3:151,138,862...151,138,926
JBrowse link
G Pick1 protein interacting with PRKCA 1 involved_in IMP PMID:23843614 UniProt PMID:23843614 RGD:8553949 NCBI chr 7:120,465,472...120,484,824
Ensembl chr 7:120,465,130...120,484,840
JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within ISO (MGI:5584033|PMID:24875179) RGD PMID:24875179 MGI:5584033 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
cellular response to hyperoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg7 autophagy related 7 involved_in ISS
ISO
GO_REF:0000024
(PMID:20543840)
UniProt
RGD
PMID:20543840 GO_REF:0000024 NCBI chr 4:146,570,113...146,777,093
Ensembl chr 4:146,598,413...146,777,124
JBrowse link
G Cav1 caveolin 1 involved_in ISO
IEA
(PMID:21382479)
GO_REF:0000107
RGD
Ensembl
PMID:21382479 GO_REF:0000107 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta IEP RGD PMID:23039253 RGD:9589076 NCBI chr 3:149,131,541...149,170,061
Ensembl chr 3:149,131,785...149,208,786
JBrowse link
G Egr1 early growth response 1 IEP RGD PMID:15734424 RGD:5131935 NCBI chr18:27,657,903...27,660,101
Ensembl chr18:27,657,628...27,661,429
JBrowse link
G Fas Fas cell surface death receptor involved_in ISO (PMID:21382479) RGD PMID:21382479 NCBI chr 1:252,589,785...252,624,790
Ensembl chr 1:252,589,785...252,624,790
JBrowse link
G Foxo1 forkhead box O1 involved_in ISS
ISO
GO_REF:0000024
(PMID:20543840)
UniProt
RGD
PMID:20543840 GO_REF:0000024 NCBI chr 2:141,451,234...141,527,016
Ensembl chr 2:141,451,234...141,527,016
JBrowse link
G Nox1 NADPH oxidase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3616995 (MGI:4881403|PMID:19661248)
Ensembl
RGD
PMID:19661248 GO_REF:0000107 MGI:4881403 NCBI chr  X:104,909,328...104,932,508
Ensembl chr  X:104,909,326...104,932,508
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma IEP RGD PMID:22444276 RGD:8553189 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link
G Txn1 thioredoxin 1 IEP RGD PMID:21505996 RGD:5133704 NCBI chr 5:75,049,735...75,057,731
Ensembl chr 5:75,049,747...75,057,752
JBrowse link
G Txnrd1 thioredoxin reductase 1 IEP RGD PMID:21505996 RGD:5133704 NCBI chr 7:26,946,124...26,984,400
Ensembl chr 7:26,946,125...26,984,400
JBrowse link
cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07004992.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:173,275,336...173,284,941 JBrowse link
G AABR07060833.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr 4:96,562,725...96,564,611 JBrowse link
G AC130253.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:37,582,706...37,583,167 JBrowse link
G Acaa2 acetyl-CoA acyltransferase 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:18371312)
Ensembl
RGD
PMID:18371312 GO_REF:0000107 NCBI chr18:70,733,872...70,762,395
Ensembl chr18:70,733,872...70,762,395
JBrowse link
G Adam8 ADAM metallopeptidase domain 8 involved_in ISO (PMID:18566576) RGD PMID:18566576 NCBI chr 1:212,317,510...212,332,895
Ensembl chr 1:212,317,848...212,330,349
JBrowse link
G Adrb2 adrenoceptor beta 2 IDA RGD PMID:19098126 RGD:8548506 NCBI chr18:57,513,792...57,515,834
Ensembl chr18:57,513,793...57,515,834
JBrowse link
G Ak4 adenylate kinase 4 involved_in
acts_upstream_of
ISO
ISS
(PMID:30696468)
GO_REF:0000024
(PMID:19130895), (PMID:23474458), (PMID:26980435)
RGD
UniProt
PMID:19130895 PMID:23474458 PMID:26980435 PMID:30696468 GO_REF:0000024 NCBI chr 5:120,250,318...120,309,153
Ensembl chr 5:120,250,616...120,305,897
JBrowse link
G Akt1 AKT serine/threonine kinase 1 IDA RGD PMID:20515660 RGD:5509097 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Angpt4 angiopoietin 4 involved_in ISO (PMID:12958144) RGD PMID:12958144 NCBI chr 3:147,421,724...147,455,670
Ensembl chr 3:147,422,095...147,455,670
JBrowse link
G Ankrd1 ankyrin repeat domain 1 IEP RGD PMID:19299913 RGD:5133278 NCBI chr 1:254,726,985...254,745,673
Ensembl chr 1:254,726,969...254,735,548
JBrowse link
G Aqp1 aquaporin 1 involved_in ISO
ISS
(PMID:18275976)
GO_REF:0000024
RGD
UniProt
PMID:18275976 GO_REF:0000024 NCBI chr 4:85,551,503...85,563,683
Ensembl chr 4:85,551,502...85,569,360
JBrowse link
G Aqp3 aquaporin 3 (Gill blood group) acts_upstream_of_or_within ISO (PMID:24462679) RGD PMID:24462679 NCBI chr 5:57,423,735...57,429,252
Ensembl chr 5:57,423,734...57,429,245
JBrowse link
G Asl argininosuccinate lyase IEP RGD PMID:11097477 RGD:1599264 NCBI chr12:30,160,922...30,178,348
Ensembl chr12:30,165,694...30,178,341
JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b IEP RGD PMID:29300489 RGD:13792656 NCBI chr 2:208,566,385...208,577,147
Ensembl chr 2:208,566,385...208,577,146
Ensembl chr 2:208,566,385...208,577,146
JBrowse link
G Atp7a ATPase copper transporting alpha IEP RGD PMID:21346155 RGD:11341705 NCBI chr  X:77,076,085...77,193,644
Ensembl chr  X:77,076,106...77,193,644
JBrowse link
G B3gat1 beta-1,3-glucuronyltransferase 1 IEP RGD PMID:21400481 RGD:14390075 NCBI chr 8:27,777,024...27,804,368
Ensembl chr 8:27,777,179...27,804,515
JBrowse link
G Bad BCL2-associated agonist of cell death involved_in ISO
IBA
(PMID:20810912)
PMID:21873635
RGD PMID:20810912, PMID:21873635 RGD:13792537 NCBI chr 1:222,198,516...222,207,459
Ensembl chr 1:222,198,534...222,207,453
JBrowse link
G Bbc3 Bcl-2 binding component 3 involved_in ISO (PMID:20810912) RGD PMID:20810912 NCBI chr 1:78,261,491...78,267,802 JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within
involved_in
IEP
ISO
IEA
with serum deprivation
(MGI:77298|PMID:7595537)
GO_REF:0000107
RGD
Ensembl
PMID:7595537, PMID:20669351 GO_REF:0000107 MGI:77298, RGD:11353793 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Bcl2l1 Bcl2-like 1 IEP with serum deprivation RGD PMID:20669351 RGD:11353793 NCBI chr 3:148,259,594...148,314,191
Ensembl chr 3:148,259,596...148,313,810
JBrowse link
G Bdkrb2 bradykinin receptor B2 IEP RGD PMID:19565561 RGD:4891057 NCBI chr 6:129,399,468...129,429,676
Ensembl chr 6:129,399,468...129,429,676
JBrowse link
G Bnip3 BCL2 interacting protein 3 acts_upstream_of_or_within
involved_in
IEP
ISO
UniProtKB:O60238 (PMID:19273585)
(PMID:20436456)
RGD PMID:19273585 PMID:20436456, PMID:17379825 RGD:9685412 NCBI chr 1:211,248,098...211,265,282
Ensembl chr 1:211,248,098...211,265,282
JBrowse link
G Bnip3l BCL2 interacting protein 3 like acts_upstream_of_or_within ISO UniProtKB:Q12983 (PMID:19273585) RGD PMID:19273585 NCBI chr15:43,643,897...43,667,123
Ensembl chr15:43,643,897...43,667,029
JBrowse link
G Brip1 BRCA1 interacting helicase 1 IEP RGD PMID:12511571 RGD:11251702 NCBI chr10:73,507,009...73,632,742
Ensembl chr10:73,507,100...73,629,581
JBrowse link
G Casr calcium-sensing receptor IEP RGD PMID:21073657 RGD:7206834 NCBI chr11:67,188,204...67,262,261
Ensembl chr11:67,188,630...67,258,771
JBrowse link
G Cbs cystathionine beta synthase involved_in IDA PMID:20149843 UniProt PMID:20149843 RGD:8554341 NCBI chr20:10,361,987...10,386,663
Ensembl chr20:10,361,988...10,386,751
JBrowse link
G Ccna2 cyclin A2 IEP RGD PMID:25289051 RGD:10054493 NCBI chr 2:123,274,727...123,282,266
Ensembl chr 2:123,275,881...123,282,214
JBrowse link
G Ccnb1 cyclin B1 IEP RGD PMID:12374461 RGD:2316579 NCBI chr 2:30,782,133...30,791,106
Ensembl chr 2:30,783,915...30,791,221
JBrowse link
G Cflar CASP8 and FADD-like apoptosis regulator IEP RGD PMID:12031707 RGD:8663470 NCBI chr 9:65,534,608...65,586,395
Ensembl chr 9:65,534,704...65,587,251
JBrowse link
G Clca1 chloride channel accessory 1 IEP RGD PMID:18616988 RGD:4188872 NCBI chr 2:250,897,980...250,923,711
Ensembl chr 2:250,897,969...250,923,744
JBrowse link
G Cox4i2 cytochrome c oxidase subunit 4i2 IEP RGD PMID:23303788 RGD:11344908 NCBI chr 3:148,234,546...148,245,424
Ensembl chr 3:148,234,193...148,245,416
JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 involved_in ISO
ISS
(PMID:18752464)
(MGI:5543770|PMID:18752464)
GO_REF:0000024
RGD
UniProt
PMID:18752464 GO_REF:0000024 MGI:5543770 NCBI chr 1:143,171,457...143,278,485
Ensembl chr 1:143,171,264...143,278,485
JBrowse link
G Cpeb2 cytoplasmic polyadenylation element binding protein 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5543770|PMID:18752464)
(PMID:18752464)
UniProt
RGD
PMID:18752464 GO_REF:0000024 MGI:5543770 NCBI chr14:72,327,929...72,382,519
Ensembl chr14:72,331,705...72,380,330
JBrowse link
G Cr1l complement C3b/C4b receptor 1 like acts_upstream_of_or_within ISO (MGI:4821502|PMID:20675597) RGD PMID:20675597 MGI:4821502 NCBI chr13:113,824,886...113,872,097
Ensembl chr13:113,824,892...113,872,097
JBrowse link
G Cybb cytochrome b-245 beta chain IEP RGD PMID:21302291 RGD:11040609 NCBI chr  X:14,578,330...14,610,049
Ensembl chr  X:14,578,264...14,612,547
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha IEP RGD PMID:24282625 RGD:9589039 NCBI chr 6:28,205,375...28,346,052
Ensembl chr 6:28,235,695...28,340,577
JBrowse link
G Drd1 dopamine receptor D1 IEP RGD PMID:20969567 RGD:7248614 NCBI chr17:11,099,736...11,104,352
Ensembl chr17:11,101,306...11,103,541
JBrowse link
G E2f1 E2F transcription factor 1 IEP RGD PMID:19088195 RGD:2316261 NCBI chr 3:150,062,895...150,073,721
Ensembl chr 3:150,047,826...150,073,721
JBrowse link
G Edn1 endothelin 1 IEP RGD PMID:9551744 RGD:8662285 NCBI chr17:22,136,814...22,143,745
Ensembl chr17:22,137,324...22,143,324
JBrowse link
G Egln1 egl-9 family hypoxia-inducible factor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:57,660,194...57,701,158
Ensembl chr19:57,662,278...57,699,113
JBrowse link
G Egln2 egl-9 family hypoxia-inducible factor 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:83,969,456...83,977,665
Ensembl chr 1:83,969,457...83,977,236
JBrowse link
G Egln3 egl-9 family hypoxia-inducible factor 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:75,050,329...75,075,795
Ensembl chr 6:75,050,329...75,075,795
JBrowse link
G Egr1 early growth response 1 IEP RGD PMID:21220915 RGD:5131857 NCBI chr18:27,657,903...27,660,101
Ensembl chr18:27,657,628...27,661,429
JBrowse link
G Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 IDA RGD PMID:10100614 RGD:10401146 NCBI chr16:68,954,860...68,968,248
Ensembl chr16:68,954,875...68,968,248
JBrowse link
G Eln elastin IEP RGD PMID:16055482 RGD:9585727 NCBI chr12:24,978,478...25,021,864
Ensembl chr12:24,978,483...25,021,863
JBrowse link
G Endog endonuclease G IEP RGD PMID:17379825 RGD:9685412 NCBI chr 3:8,741,833...8,744,414
Ensembl chr 3:8,741,766...8,744,592
JBrowse link
G Eno1 enolase 1 involved_in IDA PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chr 5:167,288,223...167,299,610
Ensembl chr 5:167,288,223...167,299,609
JBrowse link
G Epas1 endothelial PAS domain protein 1 involved_in IEP
IBA
ISO
IEA
ISS
PMID:21873635
(PMID:11573933)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:11573933, PMID:12099714, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:11041576, RGD:13792537 NCBI chr 6:10,306,508...10,385,239
Ensembl chr 6:10,306,405...10,387,265
JBrowse link
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha IEP RGD PMID:12752442 RGD:10401130 NCBI chr15:19,619,947...19,655,381
Ensembl chr15:19,619,973...19,655,381
JBrowse link
G Fabp1 fatty acid binding protein 1 involved_in ISO (PMID:16175609) RGD PMID:16175609 NCBI chr 4:99,063,181...99,066,957
Ensembl chr 4:99,063,181...99,066,954
JBrowse link
G Fam162a family with sequence similarity 162, member A involved_in ISO
IBA
(PMID:15082785)
(MGI:5319611|PMID:17316997)
PMID:21873635
RGD PMID:15082785 PMID:17316997, PMID:21873635 MGI:5319611, RGD:13792537 NCBI chr11:67,618,683...67,646,253
Ensembl chr11:67,618,625...67,646,253
JBrowse link
G Fas Fas cell surface death receptor IEP RGD PMID:12031707 RGD:8663470 NCBI chr 1:252,589,785...252,624,790
Ensembl chr 1:252,589,785...252,624,790
JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 IEP RGD PMID:11981751 RGD:634296 NCBI chr12:9,033,993...9,205,886
Ensembl chr12:9,034,308...9,205,905
JBrowse link
G Fmn2 formin 2 involved_in ISO (PMID:23375502) RGD PMID:23375502 NCBI chr13:92,569,256...92,887,302 JBrowse link
G Foxo3 forkhead box O3 IEP RGD PMID:24278276 RGD:10402204 NCBI chr20:46,428,078...46,519,156
Ensembl chr20:46,428,124...46,519,144
JBrowse link
G Gata6 GATA binding protein 6 involved_in IEA
ISO
GO_REF:0000107
(PMID:21127043)
Ensembl
RGD
PMID:21127043 GO_REF:0000107 NCBI chr18:2,415,821...2,447,087
Ensembl chr18:2,416,552...2,446,338
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within
involved_in
IEP
ISO
ISS
IBA
IMP
MGI:101884|MGI:2676890|MGI:3618742 (MGI:5528778|PMID:24011070)
GO_REF:0000024
(PMID:11573933), (PMID:19528298), (PMID:19782034), (PMID:20810912), (PMID:20889502)
PMID:21873635
RGD
UniProt
PMID:11573933 PMID:19528298 PMID:19782034 PMID:20810912 PMID:20889502 PMID:24011070, PMID:19220706, PMID:21873635, PMID:18248612 GO_REF:0000024 MGI:5528778, RGD:9068456, RGD:13792537, RGD:9068884 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Hif3a hypoxia inducible factor 3 subunit alpha NOT|involved_in ISO
IBA
(PMID:11573933)
PMID:21873635
RGD PMID:11573933, PMID:21873635 RGD:13792537 NCBI chr 1:78,976,318...78,997,869
Ensembl chr 1:78,976,318...78,997,869
JBrowse link
G Higd1a HIG1 hypoxia inducible domain family, member 1A acts_upstream_of_or_within ISO (MGI:3654896|PMID:16815968), (MGI:5306879|PMID:21856340), (MGI:5643884|PMID:25683712) RGD PMID:16815968 PMID:21856340 PMID:25683712 MGI:3654896 MGI:5306879 MGI:5643884 NCBI chr 8:130,482,492...130,491,888
Ensembl chr 8:130,482,493...130,491,998
JBrowse link
G Hilpda hypoxia inducible lipid droplet-associated involved_in ISO (PMID:10690527) RGD PMID:10690527 NCBI chr 4:56,547,600...56,550,584
Ensembl chr 4:56,549,739...56,549,993
JBrowse link
G Hmox1 heme oxygenase 1 involved_in ISO (PMID:12511571) RGD PMID:12511571 NCBI chr19:14,508,634...14,515,455
Ensembl chr19:14,508,616...14,515,456
JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IEP RGD PMID:24177414 RGD:10445837 NCBI chr 3:159,902,441...159,965,003
Ensembl chr 3:159,902,441...159,965,003
JBrowse link
G Hp1bp3 heterochromatin protein 1, binding protein 3 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:25100860)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:25100860 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:156,581,732...156,609,059
Ensembl chr 5:156,581,732...156,609,059
JBrowse link
G Hyou1 hypoxia up-regulated 1 involved_in ISO
IEA
IBA
(PMID:10837345), (PMID:9020069)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:9020069 PMID:10837345, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:48,699,796...48,711,912
Ensembl chr 8:48,699,769...48,711,910
JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP RGD PMID:20631551 RGD:8662392 NCBI chr 8:22,035,287...22,047,049
Ensembl chr 8:22,035,256...22,047,059
JBrowse link
G Il7 interleukin 7 IEP RGD PMID:19055876 RGD:10402937 NCBI chr 2:96,427,884...96,474,979
Ensembl chr 2:96,439,286...96,474,977
JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 IEP RGD PMID:15793310 RGD:1579809 NCBI chr  X:156,716,469...156,726,367
Ensembl chr  X:156,716,604...156,725,977
JBrowse link
G Ireb2 iron responsive element binding protein 2 IEP RGD PMID:22159112 RGD:6893269 NCBI chr 8:59,450,974...59,503,634
Ensembl chr 8:59,420,123...59,501,118
JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor, type 1 IEP RGD PMID:17285299 RGD:6482794 NCBI chr 4:140,247,297...140,580,749
Ensembl chr 4:140,247,313...140,580,748
JBrowse link
G Itpr2 inositol 1,4,5-trisphosphate receptor, type 2 IEP RGD PMID:17285299 RGD:6482794 NCBI chr 4:180,423,452...180,800,088
Ensembl chr 4:180,538,389...180,722,358
JBrowse link
G Kcnd2 potassium voltage-gated channel subfamily D member 2 involved_in IDA PMID:25352783 UniProt PMID:25352783 RGD:10047379 NCBI chr 4:48,309,283...48,816,804 JBrowse link
G Kcnk2 potassium two pore domain channel subfamily K member 2 IEP RGD PMID:24705172 RGD:9831164 NCBI chr13:107,690,111...107,886,476
Ensembl chr13:107,690,087...107,886,476
JBrowse link
G Kcnk3 potassium two pore domain channel subfamily K member 3 IMP RGD PMID:12215606 RGD:2316539 NCBI chr 6:27,154,274...27,190,209
Ensembl chr 6:27,151,612...27,190,132
JBrowse link
G Kcnmb1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 IEP RGD PMID:19461047 RGD:10412041 NCBI chr10:18,910,586...18,922,856
Ensembl chr10:18,906,010...18,919,639
JBrowse link
G Lmna lamin A/C involved_in ISO
IEA
(PMID:20810912)
GO_REF:0000107
RGD
Ensembl
PMID:20810912 GO_REF:0000107 NCBI chr 2:187,842,884...187,863,552
Ensembl chr 2:187,842,885...187,863,516
JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:20810912) RGD PMID:20810912 NCBI chr 7:60,719,060...60,743,618
Ensembl chr 7:60,719,066...60,743,328
JBrowse link
G Mdm4 MDM4 regulator of p53 involved_in ISO (PMID:20810912) RGD PMID:20810912 NCBI chr13:49,786,776...49,828,780
Ensembl chr13:49,792,794...49,828,720
JBrowse link
G Mfn1 mitofusin 1 IEP RGD PMID:27833818 RGD:12910766 NCBI chr 2:118,929,738...118,971,689
Ensembl chr 2:118,929,738...118,973,698
JBrowse link
G Mfn2 mitofusin 2 IEP RGD PMID:28478070 RGD:12910733 NCBI chr 5:164,684,244...164,715,414
Ensembl chr 5:164,684,509...164,714,145
JBrowse link
G Mgarp mitochondria-localized glutamic acid-rich protein involved_in ISO (MGI:3850758|PMID:19528298) RGD PMID:19528298 MGI:3850758 NCBI chr 2:140,444,963...140,453,719
Ensembl chr 2:140,444,965...140,453,107
JBrowse link
G Mief1 mitochondrial elongation factor 1 IEP RGD PMID:25911325 RGD:12880381 NCBI chr 7:121,462,962...121,478,545
Ensembl chr 7:121,462,966...121,478,546
JBrowse link
G Mif macrophage migration inhibitory factor IEP RGD PMID:19462902 RGD:4890975 NCBI chr20:13,715,219...13,732,980
Ensembl chr20:13,732,198...13,732,859
JBrowse link
G Mir199a2 microRNA 199a-2 acts_upstream_of_or_within ISO MGI:101884|MGI:106918|MGI:2676890 (MGI:5528778|PMID:24011070) RGD PMID:24011070 MGI:5528778 NCBI chr13:80,125,487...80,125,596
Ensembl chr13:80,125,487...80,125,596
JBrowse link
G Mir223 microRNA 223 IEP RGD PMID:29608885 RGD:21408565 NCBI chr  X:65,367,812...65,367,921
Ensembl chr  X:65,367,812...65,367,921
JBrowse link
G Mpl MPL proto-oncogene, thrombopoietin receptor IEP RGD PMID:15642952 RGD:10449018 NCBI chr 5:137,268,412...137,282,032
Ensembl chr 5:137,269,480...137,281,298
JBrowse link
G Mst1 macrophage stimulating 1 IEP RGD PMID:23647599 RGD:10448278 NCBI chr 8:116,857,716...116,862,286
Ensembl chr 8:116,857,684...116,862,423
JBrowse link
G Mt3 metallothionein 3 involved_in ISO (PMID:18206644) RGD PMID:18206644 NCBI chr19:11,324,708...11,326,112
Ensembl chr19:11,324,698...11,326,139
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISS
ISO
GO_REF:0000024
(MGI:3654795|PMID:16915281)
UniProt
RGD
PMID:16915281 GO_REF:0000024 MGI:3654795 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISO (PMID:15459207) RGD PMID:15459207 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Myocd myocardin IEP RGD PMID:20621093 RGD:5132874 NCBI chr10:51,682,053...51,781,458
Ensembl chr10:51,683,540...51,778,986
JBrowse link
G Ndnf neuron-derived neurotrophic factor involved_in ISO (PMID:24706764) RGD PMID:24706764 NCBI chr 4:96,528,830...96,565,780 JBrowse link
G Ndrg1 N-myc downstream regulated 1 involved_in ISO (PMID:20810912) RGD PMID:20810912 NCBI chr 7:107,734,326...107,775,701
Ensembl chr 7:107,734,323...107,775,714
JBrowse link
G Nfe2l2 nuclear factor, erythroid 2-like 2 IEP RGD PMID:23904790 RGD:10412703 NCBI chr 3:62,497,568...62,525,146
Ensembl chr 3:62,497,571...62,524,996
JBrowse link
G Nkx3-1 NK3 homeobox 1 involved_in ISO (PMID:21056661) RGD PMID:21056661 NCBI chr15:51,065,316...51,067,908
Ensembl chr15:51,065,316...51,068,421
JBrowse link
G Nog noggin IEP RGD PMID:25740156 RGD:12801489 NCBI chr10:76,811,759...76,813,386
Ensembl chr10:76,811,759...76,813,386
JBrowse link
G Nol3 nucleolar protein 3 involved_in IDA PMID:22082675 UniProt PMID:22082675 RGD:10047303 NCBI chr19:37,232,567...37,236,668
Ensembl chr19:37,235,001...37,236,649
JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:22522597) RGD PMID:22522597 NCBI chr 1:77,836,522...77,843,991
Ensembl chr 1:77,836,196...77,844,189
JBrowse link
G Npepps aminopeptidase puromycin sensitive involved_in ISO (PMID:21056661) RGD PMID:21056661 NCBI chr10:85,140,368...85,222,861
Ensembl chr10:85,140,370...85,222,861
JBrowse link
G Npm1 nucleophosmin 1 IEP RGD PMID:21444791 RGD:11535018 NCBI chr10:18,080,949...18,091,062
Ensembl chr10:18,080,950...18,090,950
JBrowse link
G Opa1 OPA1, mitochondrial dynamin like GTPase IEP RGD PMID:27833818 RGD:12910766 NCBI chr11:74,717,600...74,793,902
Ensembl chr11:74,720,254...74,793,803
JBrowse link
G Oprd1 opioid receptor, delta 1 involved_in ISO (PMID:24613828) RGD PMID:24613828 NCBI chr 5:150,288,126...150,323,063
Ensembl chr 5:150,288,126...150,323,063
JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta involved_in ISO (PMID:12095988) RGD PMID:12095988 NCBI chr10:109,736,459...109,748,070
Ensembl chr10:109,736,458...109,747,987
JBrowse link
G Palld palladin, cytoskeletal associated protein IEP RGD PMID:16481593 RGD:2325785 NCBI chr16:31,865,712...31,948,168 JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 IEP RGD PMID:24177414 RGD:10445837 NCBI chr 3:171,213,936...171,219,885
Ensembl chr 3:171,213,936...171,219,871
JBrowse link
G Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 IEP RGD PMID:23647599 RGD:10448278 NCBI chr 1:1,734,863...1,767,759
Ensembl chr 1:1,736,276...1,767,618
JBrowse link
G Pgk1 phosphoglycerate kinase 1 involved_in ISO (PMID:11130727) RGD PMID:11130727 NCBI chr  X:77,263,399...77,279,373
Ensembl chr  X:77,263,359...77,279,367
JBrowse link
G Phb2 prohibitin 2 IEP RGD PMID:25031298 RGD:12903263 NCBI chr 4:157,230,769...157,235,375
Ensembl chr 4:157,230,769...157,235,367
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:24553947)
(MGI:5558956|PMID:24553947)
RGD PMID:24553947 MGI:5558956 NCBI chr 5:156,677,146...156,689,258
Ensembl chr 5:156,677,146...156,689,415
JBrowse link
G Plau plasminogen activator, urokinase IEP RGD PMID:19490965 RGD:7241802 NCBI chr15:3,644,296...3,650,765
Ensembl chr15:3,644,769...3,650,819
JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in ISO (PMID:14699081), (PMID:20810912) RGD PMID:14699081 PMID:20810912 NCBI chr18:62,159,128...62,179,635
Ensembl chr18:62,174,670...62,181,102
JBrowse link
G Ppard peroxisome proliferator-activated receptor delta acts_upstream_of_or_within ISO MGI:106918|MGI:2676890|MGI:3618742 (MGI:5528778|PMID:24011070) RGD PMID:24011070 MGI:5528778 NCBI chr20:7,818,289...7,883,482
Ensembl chr20:7,818,289...7,885,333
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:22527940 RGD:7242177 NCBI chr14:63,095,291...63,190,688
Ensembl chr14:63,095,720...63,187,009
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 IEP RGD PMID:17720864 RGD:2316813 NCBI chr 2:54,857,688...54,893,404
Ensembl chr 2:54,857,688...54,893,404
JBrowse link
G Prkce protein kinase C, epsilon acts_upstream_of_or_within ISO (MGI:3776183|PMID:18070622) RGD PMID:18070622 MGI:3776183 NCBI chr 6:9,483,400...9,973,396
Ensembl chr 6:9,790,422...9,973,396
JBrowse link
G Pten phosphatase and tensin homolog acts_upstream_of_or_within ISO (MGI:5584033|PMID:24875179) RGD PMID:24875179 MGI:5584033 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Ptgis prostaglandin I2 synthase involved_in ISS
ISO
GO_REF:0000024
(PMID:21296955)
UniProt
RGD
PMID:21296955 GO_REF:0000024 NCBI chr 3:163,950,746...163,986,129 JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in ISO (PMID:21296955) RGD PMID:21296955 NCBI chr13:67,351,230...67,356,920
Ensembl chr13:67,351,087...67,359,335
JBrowse link
G Ptn pleiotrophin IEP RGD PMID:16226713, PMID:17925408 RGD:9834996, RGD:10044023 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Rgcc regulator of cell cycle involved_in ISO (PMID:19652095) RGD PMID:19652095 NCBI chr15:61,551,861...61,564,695
Ensembl chr15:61,551,861...61,564,695
JBrowse link
G RGD1306484 similar to growth and transformation-dependent protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:37,582,678...37,583,232 JBrowse link
G Rnf146 ring finger protein 146 IEP RGD PMID:26218637 RGD:13524866 NCBI chr 1:30,856,923...30,873,814
Ensembl chr 1:30,863,217...30,873,808
JBrowse link
G Rora RAR-related orphan receptor A involved_in ISO (PMID:18658046) RGD PMID:18658046 NCBI chr 8:75,515,886...75,616,477
Ensembl chr 8:75,516,904...75,607,212
JBrowse link
G Rtn4 reticulon 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:6274961|PMID:27763637)
UniProt
RGD
PMID:27763637 GO_REF:0000024 MGI:6274961 NCBI chr14:114,126,931...114,174,459
Ensembl chr14:114,126,943...114,174,458
JBrowse link
G S100b S100 calcium binding protein B IEP RGD PMID:19910580 RGD:2325647 NCBI chr20:13,130,633...13,142,856
Ensembl chr20:13,130,636...13,142,856
JBrowse link
G Scn2a sodium voltage-gated channel alpha subunit 2 involved_in IDA PMID:28029095 UniProt PMID:28029095 RGD:14390052 NCBI chr 3:51,687,910...51,822,008
Ensembl chr 3:51,687,809...51,822,250
JBrowse link
G Sdhd succinate dehydrogenase complex subunit D acts_upstream_of_or_within ISO MGI:3526521 (MGI:3525749|PMID:15572694) RGD PMID:15572694 MGI:3525749 NCBI chr 8:55,028,125...55,037,604
Ensembl chr 8:55,028,125...55,037,604
JBrowse link
G Serpine1 serpin family E member 1 IEP RGD PMID:10590062 RGD:8547811 NCBI chr12:22,641,104...22,651,482
Ensembl chr12:22,641,104...22,651,482
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in ISO
IEA
(PMID:11932307)
GO_REF:0000107
RGD
Ensembl
PMID:11932307 GO_REF:0000107 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
G Sirt1 sirtuin 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:20620956)
Ensembl
RGD
PMID:20620956 GO_REF:0000107 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
G Sirt2 sirtuin 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:24681946)
UniProt
RGD
PMID:24681946 GO_REF:0000024 NCBI chr 1:86,948,866...86,971,954
Ensembl chr 1:86,948,918...86,971,952
JBrowse link
G Sirt4 sirtuin 4 IEP RGD PMID:24029877 RGD:9586053 NCBI chr12:46,862,358...46,876,593
Ensembl chr12:46,868,416...46,876,592
JBrowse link
G Slc11a2 solute carrier family 11 member 2 IEP RGD PMID:21325818 RGD:5688411 NCBI chr 7:142,025,812...142,062,892
Ensembl chr 7:142,025,815...142,063,212
JBrowse link
G Slc29a1 solute carrier family 29 member 1 IEP RGD PMID:10646513 RGD:1598899 NCBI chr 9:17,784,468...17,799,008
Ensembl chr 9:17,784,468...17,799,005
JBrowse link
G Slc2a4 solute carrier family 2 member 4 IDA RGD PMID:20868366 RGD:7349316 NCBI chr10:56,552,921...56,558,562
Ensembl chr10:56,552,983...56,558,487
JBrowse link
G Slc8a1 solute carrier family 8 member A1 IEP RGD PMID:17394575 RGD:1642726 NCBI chr 6:4,244,076...4,564,262
Ensembl chr 6:4,258,991...4,520,604
JBrowse link
G Slc8a3 solute carrier family 8 member A3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5693358|PMID:24101730)
UniProt
RGD
PMID:24101730 GO_REF:0000024 MGI:5693358 NCBI chr 6:104,889,500...105,099,408
Ensembl chr 6:104,891,376...105,097,054
JBrowse link
G Slc9a1 solute carrier family 9 member A1 IDA RGD PMID:20868366 RGD:7349316 NCBI chr 5:151,573,122...151,626,360
Ensembl chr 5:151,573,092...151,627,316
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase IEP RGD PMID:20380727 RGD:2324980 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Stc1 stanniocalcin 1 IEP RGD PMID:15485913 RGD:2324700 NCBI chr15:50,891,137...50,901,791
Ensembl chr15:50,891,127...50,903,162
JBrowse link
G Stc2 stanniocalcin 2 IEP RGD PMID:15485913 RGD:2324700 NCBI chr10:16,542,909...16,552,675
Ensembl chr10:16,542,882...16,553,295
JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in IDA PMID:19953350 ARUK-UCL PMID:19953350 RGD:13507303 NCBI chr10:15,197,754...15,200,035
Ensembl chr10:15,197,803...15,200,117
JBrowse link
G Suv39h1 suppressor of variegation 3-9 homolog 1 acts_upstream_of_or_within ISO (PMID:21402781) RGD PMID:21402781 NCBI chr  X:146,532,002...146,533,538 JBrowse link
G Suv39h2 suppressor of variegation 3-9 homolog 2 acts_upstream_of_or_within ISO (PMID:21402781) RGD PMID:21402781 NCBI chr17:78,762,897...78,782,016
Ensembl chr17:78,762,991...78,782,016
JBrowse link
G Tbl2 transducin (beta)-like 2 involved_in ISO (PMID:25393282) RGD PMID:25393282 NCBI chr12:24,565,843...24,578,855
Ensembl chr12:24,565,849...24,578,786
JBrowse link
G Tert telomerase reverse transcriptase involved_in IEP
ISO
(PMID:11313459) RGD PMID:11313459, PMID:24376652 RGD:11038675 NCBI chr 1:32,250,876...32,275,330
Ensembl chr 1:32,251,714...32,272,476
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase involved_in ISO (PMID:23185017) RGD PMID:23185017 NCBI chr 4:159,635,145...159,654,108
Ensembl chr 4:159,635,153...159,654,063
JBrowse link
G Tp53 tumor protein p53 involved_in ISO (PMID:20810912) RGD PMID:20810912 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IEP PMID:31900229 ARUK-UCL PMID:31900229 RGD:126781734 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013
JBrowse link
G Trpc1 transient receptor potential cation channel, subfamily C, member 1 IEP RGD PMID:19889962 RGD:7247600 NCBI chr 8:103,503,982...103,554,905
Ensembl chr 8:103,503,985...103,554,468
JBrowse link
G Trpc6 transient receptor potential cation channel, subfamily C, member 6 IEP RGD PMID:19889962 RGD:7247600 NCBI chr 8:6,811,543...6,917,534
Ensembl chr 8:6,811,543...6,917,535
JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (PMID:18297062)
(MGI:5284765|PMID:18297062)
RGD PMID:18297062 MGI:5284765 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
G Ubqln1 ubiquilin 1 involved_in ISO
ISS
IEA
(PMID:12095988)
GO_REF:0000024
GO_REF:0000107
RGD
HGNC
Ensembl
PMID:12095988 GO_REF:0000024 GO_REF:0000107 NCBI chr17:6,840,441...6,878,842
Ensembl chr17:6,840,463...6,878,844
JBrowse link
G Ucn2 urocortin 2 IEP RGD PMID:14519439 RGD:2306174 NCBI chr 8:117,727,216...117,728,765
Ensembl chr 8:117,727,877...117,728,764
JBrowse link
G Ucn3 urocortin 3 IEP RGD PMID:14519439 RGD:2306174 NCBI chr17:69,959,879...69,966,532
Ensembl chr17:69,960,160...69,966,099
JBrowse link
G Vasn vasorin acts_upstream_of_or_within ISO MGI:5140849 (MGI:5014460|PMID:21658601) RGD PMID:21658601 MGI:5014460 NCBI chr10:11,121,041...11,131,548
Ensembl chr10:11,121,041...11,131,548
JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO (PMID:10575000) RGD PMID:10575000 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Vldlr very low density lipoprotein receptor IDA RGD PMID:19233325 RGD:2324641 NCBI chr 1:245,236,819...245,273,688
Ensembl chr 1:245,237,736...245,269,205
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 involved_in ISO
ISS
(PMID:21832157)
GO_REF:0000024
RGD
UniProt
PMID:21832157 GO_REF:0000024 NCBI chr 6:103,308,032...103,313,074
Ensembl chr 6:103,308,045...103,313,074
JBrowse link
cellular response to increased oxygen levels term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap1 ATPase H+ transporting accessory protein 1 involved_in ISO
ISS
IEA
(PMID:28296633)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:28296633 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:156,407,973...156,415,053
Ensembl chr  X:156,407,937...156,415,145
JBrowse link
G Atp6v0a2 ATPase H+ transporting V0 subunit a2 involved_in ISO (PMID:28296633) RGD PMID:28296633 NCBI chr12:37,368,321...37,398,233
Ensembl chr12:37,363,906...37,425,596
JBrowse link
G Atp6v0d1 ATPase H+ transporting V0 subunit D1 involved_in ISO (PMID:28296633) RGD PMID:28296633 NCBI chr19:37,481,782...37,525,762
Ensembl chr19:37,481,782...37,525,762
JBrowse link
G Atp6v1a ATPase H+ transporting V1 subunit A involved_in ISO (PMID:28296633) RGD PMID:28296633 NCBI chr11:61,531,386...61,584,634
Ensembl chr11:61,531,416...61,584,634
JBrowse link
G Atp6v1g1 ATPase H+ transporting V1 subunit G1 involved_in ISO (PMID:28296633) RGD PMID:28296633 NCBI chr 5:79,367,663...79,373,843
Ensembl chr 5:79,367,663...79,373,843
JBrowse link
G Ccdc115 coiled-coil domain containing 115 involved_in ISO (PMID:28296633) RGD PMID:28296633 NCBI chr 9:37,774,876...37,778,839
Ensembl chr 9:37,775,311...37,779,967
JBrowse link
G Lcn2 lipocalin 2 IEP RGD PMID:24916903 RGD:126790489 NCBI chr 3:11,414,189...11,417,534
Ensembl chr 3:11,414,186...11,417,546
JBrowse link
G Tmem199 transmembrane protein 199 involved_in ISO
ISS
(PMID:28296633)
GO_REF:0000024
RGD
UniProt
PMID:28296633 GO_REF:0000024 NCBI chr10:65,775,721...65,780,293
Ensembl chr10:65,775,715...65,780,349
JBrowse link
cellular response to oxygen-glucose deprivation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aifm1 apoptosis inducing factor, mitochondria associated 1 IEP RGD PMID:14526224 RGD:10047409 NCBI chr  X:135,304,063...135,343,062
Ensembl chr  X:135,304,066...135,343,087
JBrowse link
G Aqp3 aquaporin 3 (Gill blood group) involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5551666|PMID:24462679)
Ensembl
RGD
PMID:24462679 GO_REF:0000107 MGI:5551666 NCBI chr 5:57,423,735...57,429,252
Ensembl chr 5:57,423,734...57,429,245
JBrowse link
G Atf4 activating transcription factor 4 IEP RGD PMID:20444431 RGD:13464322 NCBI chr 7:121,480,723...121,482,781
Ensembl chr 7:121,480,723...121,482,772
JBrowse link
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 IEP RGD PMID:23421680 RGD:13514095 NCBI chr 7:140,311,120...140,324,902
Ensembl chr 7:140,315,368...140,324,902
JBrowse link
G Cbl Cbl proto-oncogene IEP RGD PMID:24229686 RGD:11038824 NCBI chr 8:48,481,256...48,564,775
Ensembl chr 8:48,489,036...48,564,722
JBrowse link
G Dnm1l dynamin 1-like IEP RGD PMID:23658809 RGD:12738215 NCBI chr11:88,830,968...88,882,271
Ensembl chr11:88,830,957...88,880,198
JBrowse link
G Ireb2 iron responsive element binding protein 2 IDA RGD PMID:16135072 RGD:12904046 NCBI chr 8:59,450,974...59,503,634
Ensembl chr 8:59,420,123...59,501,118
JBrowse link
G Lcn2 lipocalin 2 IEP RGD PMID:24916903 RGD:126790489 NCBI chr 3:11,414,189...11,417,534
Ensembl chr 3:11,414,186...11,417,546
JBrowse link
G Mfn1 mitofusin 1 IEP RGD PMID:23658809 RGD:12738215 NCBI chr 2:118,929,738...118,971,689
Ensembl chr 2:118,929,738...118,973,698
JBrowse link
G Mfn2 mitofusin 2 IEP RGD PMID:23658809 RGD:12738215 NCBI chr 5:164,684,244...164,715,414
Ensembl chr 5:164,684,509...164,714,145
JBrowse link
G Mir874 microRNA 874 acts_upstream_of_or_within ISO (MGI:5551666|PMID:24462679) RGD PMID:24462679 MGI:5551666 NCBI chr17:7,025,014...7,025,089
Ensembl chr17:7,025,014...7,025,089
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase IEP RGD PMID:28528966 RGD:13781879 NCBI chr 6:52,122,085...52,156,473
Ensembl chr 6:52,122,085...52,156,472
JBrowse link
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A IEP RGD PMID:21525936 RGD:10054236 NCBI chr 1:101,511,899...101,515,043
Ensembl chr 1:101,511,901...101,514,974
JBrowse link
G Tsc1 TSC complex subunit 1 involved_in IMP PMID:23435171 ParkinsonsUK-UCL PMID:23435171 RGD:10448950 NCBI chr 3:7,219,955...7,269,063
Ensembl chr 3:7,237,192...7,265,145
JBrowse link
hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cybb cytochrome b-245 beta chain IMP RGD PMID:21302291 RGD:11040609 NCBI chr  X:14,578,330...14,610,049
Ensembl chr  X:14,578,264...14,612,547
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:60478|PMID:8470821)
Ensembl
RGD
PMID:8470821 GO_REF:0000107 MGI:60478 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Pdk1 pyruvate dehydrogenase kinase 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:21763680)
UniProt
Ensembl
RGD
PMID:21763680 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:58,530,870...58,561,494
Ensembl chr 3:58,530,870...58,558,027
JBrowse link
G Pdk3 pyruvate dehydrogenase kinase 3 involved_in ISO (PMID:18718909) RGD PMID:18718909 NCBI chr  X:62,836,131...62,904,114
Ensembl chr  X:62,836,131...62,903,554
JBrowse link
intrinsic apoptotic signaling pathway in response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bnip3 BCL2 interacting protein 3 involved_in ISO (PMID:20436456) RGD PMID:20436456 NCBI chr 1:211,248,098...211,265,282
Ensembl chr 1:211,248,098...211,265,282
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:4867601|PMID:20935145) RGD PMID:20935145 MGI:4867601 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
negative regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd34 CD34 molecule involved_in ISO
ISS
(PMID:17505307)
GO_REF:0000024
RGD
UniProt
PMID:17505307 GO_REF:0000024 NCBI chr13:113,691,842...113,711,259
Ensembl chr13:113,691,932...113,711,647
JBrowse link
G Ddah1 dimethylarginine dimethylaminohydrolase 1 involved_in ISO (PMID:24895913) RGD PMID:24895913 NCBI chr 2:251,634,368...251,766,009
Ensembl chr 2:251,634,431...251,766,014
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase IMP RGD PMID:18539296 RGD:9590185 NCBI chr  X:71,540,870...71,585,906
Ensembl chr  X:71,528,988...71,585,908
JBrowse link
negative regulation of hypoxia-induced intrinsic apoptotic signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eno1 enolase 1 involved_in ISO UniProtKB:Q01986 (PMID:15459207) RGD PMID:15459207 NCBI chr 5:167,288,223...167,299,610
Ensembl chr 5:167,288,223...167,299,609
JBrowse link
G Hyou1 hypoxia up-regulated 1 involved_in IBA
IEA
ISO
IDA
PMID:21873635
GO_REF:0000107
(PMID:10037731)
PMID:11231630
Ensembl
RGD
PMID:10037731, PMID:21873635, PMID:11231630 GO_REF:0000107, RGD:13792537, RGD:10047348 NCBI chr 8:48,699,796...48,711,912
Ensembl chr 8:48,699,769...48,711,910
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in IGI
IMP
PMID:15459207 CAFA PMID:15459207, PMID:15459207 RGD:12793039, RGD:12793039 NCBI chr 8:69,134,218...69,722,573
Ensembl chr 8:69,134,223...69,164,758
JBrowse link
G Nol3 nucleolar protein 3 involved_in IDA PMID:10590251 UniProt PMID:10590251 RGD:10047155 NCBI chr19:37,232,567...37,236,668
Ensembl chr19:37,235,001...37,236,649
JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta involved_in IEA
ISO
GO_REF:0000107
(MGI:6444553|PMID:30496354)
Ensembl
RGD
PMID:30496354 GO_REF:0000107 MGI:6444553 NCBI chr 8:107,275,849...107,381,088
Ensembl chr 8:107,275,725...107,380,933
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (MGI:5558956|PMID:24553947) RGD PMID:24553947 MGI:5558956 NCBI chr 5:156,677,146...156,689,258
Ensembl chr 5:156,677,146...156,689,415
JBrowse link
G Tmbim6 transmembrane BAX inhibitor motif containing 6 involved_in ISO (PMID:21075086) RGD PMID:21075086 NCBI chr 7:141,039,433...141,070,269
Ensembl chr 7:141,034,982...141,069,989
JBrowse link
negative regulation of hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Commd1 copper metabolism domain containing 1 acts_upstream_of_or_within ISO MGI:3714157 (MGI:3713589|PMID:17371845) RGD PMID:17371845 MGI:3713589 NCBI chr14:107,664,321...107,759,974
Ensembl chr14:107,664,255...107,760,191
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO MGI:2136645|MGI:3608931 (MGI:5618205|PMID:25186293) RGD PMID:25186293 MGI:5618205 NCBI chr 4:145,580,869...145,587,835
Ensembl chr 4:145,580,799...145,587,845
JBrowse link
negative regulation of transcription from RNA polymerase II promoter in response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in ISO (PMID:22735262) RGD PMID:22735262 NCBI chr 1:12,823,363...12,825,806
Ensembl chr 1:12,823,363...12,825,786
JBrowse link
G Hif1an hypoxia inducible factor 1 subunit alpha inhibitor involved_in IBA
ISO
PMID:21873635
(PMID:11641274)
RGD PMID:11641274, PMID:21873635 RGD:13792537 NCBI chr 1:264,309,214...264,319,269
Ensembl chr 1:264,309,214...264,319,267
JBrowse link
G Sirt2 sirtuin 2 involved_in ISO
ISS
(PMID:24681946)
GO_REF:0000024
RGD
UniProt
PMID:24681946 GO_REF:0000024 NCBI chr 1:86,948,866...86,971,954
Ensembl chr 1:86,948,918...86,971,952
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor involved_in ISO (PMID:11641274) RGD PMID:11641274 NCBI chr 4:145,580,869...145,587,835
Ensembl chr 4:145,580,799...145,587,845
JBrowse link
positive regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnk2 potassium two pore domain channel subfamily K member 2 IMP RGD PMID:24705172 RGD:9831164 NCBI chr13:107,690,111...107,886,476
Ensembl chr13:107,690,087...107,886,476
JBrowse link
positive regulation of hypoxia-inducible factor-1alpha signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rwdd3 RWD domain containing 3 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(MGI:5569907|PMID:22009797)
(PMID:23469069)
UniProt
RGD
PMID:22009797 PMID:23469069 GO_REF:0000024 MGI:5569907 NCBI chr 2:224,710,351...224,723,136
Ensembl chr 2:224,710,348...224,723,112
JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plk3 polo-like kinase 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:20889502)
UniProt
RGD
PMID:20889502 GO_REF:0000024 NCBI chr 5:135,997,725...136,002,900
Ensembl chr 5:135,997,725...136,002,900
JBrowse link
G Sirt2 sirtuin 2 involved_in ISO
ISS
(PMID:24681946)
GO_REF:0000024
RGD
UniProt
PMID:24681946 GO_REF:0000024 NCBI chr 1:86,948,866...86,971,954
Ensembl chr 1:86,948,918...86,971,952
JBrowse link
positive regulation of transcription from RNA polymerase II promoter in response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:19652095), (PMID:22735262), (PMID:24681946)
UniProt
Ensembl
RGD
PMID:19652095 PMID:22735262 PMID:24681946 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Nfe2l2 nuclear factor, erythroid 2-like 2 involved_in ISO (PMID:24844779) RGD PMID:24844779 NCBI chr 3:62,497,568...62,525,146
Ensembl chr 3:62,497,571...62,524,996
JBrowse link
G Notch1 notch receptor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5319604|PMID:18299578)
UniProt
RGD
PMID:18299578 GO_REF:0000024 MGI:5319604 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in ISO (PMID:23303788) RGD PMID:23303788 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:4867601|PMID:20935145) RGD PMID:20935145 MGI:4867601 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO (PMID:19652095) RGD PMID:19652095 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
regulation of cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ajuba ajuba LIM protein involved_in ISO (PMID:22286099) RGD PMID:22286099 NCBI chr15:33,208,210...33,218,456
Ensembl chr15:33,208,216...33,218,456
JBrowse link
G Chchd2 coiled-coil-helix-coiled-coil-helix domain containing 2 involved_in ISO (PMID:23303788) RGD PMID:23303788 NCBI chr 9:101,388,148...101,388,819
Ensembl chr 9:101,388,151...101,388,833
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEP RGD PMID:18054269 RGD:9068899 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in ISO (MGI:6271078|PMID:29353861) RGD PMID:29353861 MGI:6271078 NCBI chr 6:42,180,864...42,289,910
Ensembl chr 6:42,180,894...42,289,908
JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in ISO
IEA
ISS
(PMID:22128162)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:22128162 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:117,280,690...117,291,729
Ensembl chr 8:117,280,705...117,291,351
JBrowse link
regulation of transcription from RNA polymerase II promoter in response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bach1 BTB domain and CNC homolog 1 involved_in ISO (PMID:12511571) RGD PMID:12511571 NCBI chr11:27,364,913...27,398,713
Ensembl chr11:27,364,916...27,398,842
Ensembl chr11:27,364,916...27,398,842
JBrowse link
G Egr1 early growth response 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3847400|PMID:18323529)
Ensembl
RGD
PMID:18323529 GO_REF:0000107 MGI:3847400 NCBI chr18:27,657,903...27,660,101
Ensembl chr18:27,657,628...27,661,429
JBrowse link
G Stox1 storkhead box 1 involved_in ISO (PMID:24738702) RGD PMID:24738702 NCBI chr20:32,276,857...32,353,677
Ensembl chr20:32,276,658...32,353,677
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19599
    response to stimulus 10423
      response to abiotic stimulus 1524
        response to oxygen levels 537
          cellular response to oxygen levels 230
            cellular response to decreased oxygen levels + 208
            cellular response to increased oxygen levels + 18
paths to the root