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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to low-density lipoprotein particle stimulus
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Accession:GO:0071404 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low-density lipoprotein particle stimulus.
Synonyms:broad_synonym: response to low density lipoprotein particle;   response to low-density lipoprotein particle stimulus
 alt_id: GO:0055098



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cellular response to low-density lipoprotein particle stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casr calcium-sensing receptor IEP oxidized LDL RGD PMID:22083546 RGD:7205681 NCBI chr11:64,235,251...64,304,811
Ensembl chr11:64,235,251...64,304,811
JBrowse link
G Cd36 CD36 molecule involved_in ISS
ISO
GO_REF:0000024
(MGI:5700288|PMID:23395392)
UniProt
RGD
PMID:23395392 GO_REF:0000024 MGI:5700288 NCBI chr 4:17,317,343...17,410,084
Ensembl chr 4:17,354,466...17,513,903
JBrowse link
G Cd81 Cd81 molecule involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5700288|PMID:23395392)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23395392 GO_REF:0000024 GO_REF:0000107 MGI:5700288 NCBI chr 1:198,235,861...198,251,660
Ensembl chr 1:198,241,484...198,251,660
JBrowse link
G Cd9 CD9 molecule involved_in ISS
ISO
GO_REF:0000024
(MGI:5700288|PMID:23395392)
UniProt
RGD
PMID:23395392 GO_REF:0000024 MGI:5700288 NCBI chr 4:158,256,328...158,289,136
Ensembl chr 4:158,256,328...158,289,222
JBrowse link
G Ces1d carboxylesterase 1D involved_in ISO (PMID:18762277) RGD PMID:18762277 NCBI chr19:13,873,490...13,912,035
Ensembl chr19:13,796,623...13,912,035
JBrowse link
G F3 coagulation factor III, tissue factor IEP RGD PMID:10190887 RGD:2313771 NCBI chr 2:209,827,061...209,838,666
Ensembl chr 2:209,826,959...209,838,668
JBrowse link
G Fcer1g Fc epsilon receptor Ig involved_in ISS
ISO
GO_REF:0000024
(MGI:5700288|PMID:23395392)
UniProt
RGD
PMID:23395392 GO_REF:0000024 MGI:5700288 NCBI chr13:83,649,447...83,654,215
Ensembl chr13:83,649,449...83,671,443
JBrowse link
G Fgf21 fibroblast growth factor 21 IEP RGD PMID:22166524 RGD:10401877 NCBI chr 1:96,083,495...96,084,738
Ensembl chr 1:96,083,441...96,090,454
JBrowse link
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 IDA RGD PMID:16260 RGD:2302235 NCBI chr 2:51,649,368...51,667,100
Ensembl chr 2:51,649,497...51,667,100
JBrowse link
G Itgb1 integrin subunit beta 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5700288|PMID:23395392)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23395392 GO_REF:0000024 GO_REF:0000107 MGI:5700288 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Itgb2 integrin subunit beta 2 involved_in ISO (MGI:5700288|PMID:23395392) RGD PMID:23395392 MGI:5700288 NCBI chr20:11,061,394...11,097,656
Ensembl chr20:11,061,430...11,097,600
JBrowse link
G Ldlr low density lipoprotein receptor involved_in ISO
IEA
(PMID:6299582)
GO_REF:0000107
RGD
Ensembl
PMID:6299582 GO_REF:0000107 NCBI chr 8:20,270,020...20,292,981
Ensembl chr 8:20,270,041...20,294,580
JBrowse link
G Mfn2 mitofusin 2 IEP RGD PMID:26062420 RGD:13204747 NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
JBrowse link
G Mmp9 matrix metallopeptidase 9 IEP RGD PMID:19554388 RGD:2325827 NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
JBrowse link
G Nos3 nitric oxide synthase 3 IEP RGD PMID:29161690 RGD:13504739 NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 acts_upstream_of_or_within ISO (MGI:3706740|PMID:10787428) RGD PMID:10787428 MGI:3706740 NCBI chr18:3,379,482...3,425,100
Ensembl chr18:3,379,482...3,425,049
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma involved_in ISO (PMID:9568716) RGD PMID:9568716 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Serpine1 serpin family E member 1 IEP RGD PMID:11057874 RGD:8547812 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
JBrowse link
G Socs5 suppressor of cytokine signaling 5 involved_in ISO (MGI:5659826|PMID:24255059) RGD PMID:24255059 MGI:5659826 NCBI chr 6:7,481,039...7,512,644
Ensembl chr 6:7,481,095...7,514,834
JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 involved_in ISO
IEA
(PMID:15358760)
GO_REF:0000107
RGD
Ensembl
PMID:15358760 GO_REF:0000107 NCBI chr 7:113,663,202...113,720,850
Ensembl chr 7:113,663,202...113,720,848
JBrowse link
G Syk spleen associated tyrosine kinase involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5700288|PMID:23395392)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23395392 GO_REF:0000024 GO_REF:0000107 MGI:5700288 NCBI chr17:12,604,615...12,678,437
Ensembl chr17:12,604,619...12,661,410
JBrowse link
low-density lipoprotein particle mediated signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule involved_in ISO
IEA
(MGI:4850200|PMID:20978343)
GO_REF:0000107
RGD
Ensembl
PMID:20978343 GO_REF:0000107 MGI:4850200 NCBI chr 4:17,317,343...17,410,084
Ensembl chr 4:17,354,466...17,513,903
JBrowse link
G Cdh13 cadherin 13 involved_in ISO (PMID:16013438) RGD PMID:16013438 NCBI chr19:46,349,562...47,387,462
Ensembl chr19:46,349,430...47,387,459
JBrowse link
G Lpl lipoprotein lipase involved_in ISO (PMID:25149060) RGD PMID:25149060 NCBI chr16:20,830,055...20,853,855
Ensembl chr16:20,829,465...20,855,249
JBrowse link
G RGD1565355 similar to fatty acid translocase/CD36 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:17,424,749...17,465,808
Ensembl chr 4:17,354,466...17,513,903
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19834
    cellular process 18637
      cellular response to stimulus 8889
        cellular response to lipoprotein particle stimulus 41
          cellular response to low-density lipoprotein particle stimulus 24
            low-density lipoprotein particle mediated signaling 4
Path 2
Term Annotations click to browse term
  biological_process 19834
    response to stimulus 10556
      response to chemical 6262
        response to nitrogen compound 1590
          response to organonitrogen compound 1492
            response to lipoprotein particle 35
              cellular response to low-density lipoprotein particle stimulus 24
                low-density lipoprotein particle mediated signaling 4
paths to the root