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ONTOLOGY REPORT - ANNOTATIONS

Term:cellular response to lipoprotein particle stimulus
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Accession:GO:0071402 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipoprotein particle stimulus.

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cellular response to high density lipoprotein particle stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 NOT|involved_in ISO (MGI:3047008|PMID:15210959) BHF-UCL PMID:15210959 MGI:3047008 NCBI chrNW_004955419:21,553,863...21,681,626
Ensembl chrNW_004955419:21,553,835...21,681,619 		JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO (MGI:3047008|PMID:15210959) BHF-UCL PMID:15210959 MGI:3047008 NCBI chrNW_004955407:39,410,262...39,459,383
Ensembl chrNW_004955407:39,410,262...39,459,383 		JBrowse link
G Abcg4 ATP binding cassette subfamily G member 4 involved_in ISO (MGI:3047008|PMID:15210959) BHF-UCL PMID:15210959 MGI:3047008 NCBI chrNW_004955412:20,256,467...20,270,172
Ensembl chrNW_004955412:20,256,293...20,271,278 		JBrowse link
G Adam17 ADAM metallopeptidase domain 17 involved_in ISO (PMID:17786981) BHF-UCL PMID:17786981 NCBI chrNW_004955487:5,180,241...5,218,298
Ensembl chrNW_004955487:5,180,252...5,218,216 		JBrowse link
G Ccl5 C-C motif chemokine ligand 5 ISO oxidized HDL RGD PMID:20623482 RGD:4889888 NCBI chrNW_004955481:10,293,758...10,301,118
Ensembl chrNW_004955481:10,293,399...10,301,143 		JBrowse link
G Nos3 nitric oxide synthase 3 ISO RGD PMID:17918268 RGD:2292126 NCBI chrNW_004955491:5,438,228...5,457,308
Ensembl chrNW_004955491:5,438,010...5,460,814 		JBrowse link
cellular response to low-density lipoprotein particle stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casr calcium sensing receptor ISO oxidized LDL RGD PMID:22083546 RGD:7205681 NCBI chrNW_004955427:21,486,608...21,574,017
Ensembl chrNW_004955427:21,486,427...21,575,210 		JBrowse link
G Cd36 CD36 molecule (CD36 blood group) involved_in ISO (MGI:5700288|PMID:23395392) UniProt PMID:23395392 MGI:5700288 NCBI chrNW_004955410:5,003,720...5,120,903
Ensembl chrNW_004955410:5,003,668...5,075,313 		JBrowse link
G Cd81 CD81 molecule involved_in ISO (MGI:5700288|PMID:23395392) UniProt PMID:23395392 MGI:5700288 NCBI chrNW_004955422:14,155,682...14,175,181
Ensembl chrNW_004955422:14,155,682...14,175,181 		JBrowse link
G Cd9 CD9 molecule involved_in ISO (MGI:5700288|PMID:23395392) UniProt PMID:23395392 MGI:5700288 NCBI chrNW_004955413:3,891,874...3,924,065
Ensembl chrNW_004955413:3,891,874...3,928,119 		JBrowse link
G F3 coagulation factor III, tissue factor ISO RGD PMID:10190887 RGD:2313771 NCBI chrNW_004955423:254,060...264,448
Ensembl chrNW_004955423:254,189...264,159 		JBrowse link
G Fcer1g Fc fragment of IgE receptor Ig involved_in ISO (MGI:5700288|PMID:23395392) UniProt PMID:23395392 MGI:5700288 NCBI chrNW_004955468:12,971,931...12,975,206
Ensembl chrNW_004955468:12,971,931...12,975,206 		JBrowse link
G Fgf21 fibroblast growth factor 21 ISO RGD PMID:22166524 RGD:10401877 NCBI chrNW_004955559:1,818,400...1,821,423
Ensembl chrNW_004955559:1,817,110...1,820,417 		JBrowse link
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 ISO RGD PMID:16260 RGD:2302235 NCBI chrNW_004955446:18,978,261...18,996,794
Ensembl chrNW_004955446:18,978,102...18,998,951 		JBrowse link
G Itgb1 integrin subunit beta 1 involved_in ISO (MGI:5700288|PMID:23395392) UniProt PMID:23395392 MGI:5700288 NCBI chrNW_004955462:4,454,809...4,483,227
Ensembl chrNW_004955462:4,454,809...4,484,842 		JBrowse link
G Itgb2 integrin subunit beta 2 involved_in ISO (MGI:5700288|PMID:23395392) UniProt PMID:23395392 MGI:5700288 NCBI chrNW_004955407:41,779,849...41,805,637
Ensembl chrNW_004955407:41,777,777...41,800,201 		JBrowse link
G Ldlr low density lipoprotein receptor involved_in ISO (PMID:6299582) BHF-UCL PMID:6299582 NCBI chrNW_004955495:2,114,702...2,135,584
Ensembl chrNW_004955495:2,114,434...2,138,056 		JBrowse link
G Mfn2 mitofusin 2 ISO RGD PMID:26062420 RGD:13204747 NCBI chrNW_004955486:1,937,873...1,962,577
Ensembl chrNW_004955486:1,937,802...1,962,772 		JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO RGD PMID:19554388 RGD:2325827 NCBI chrNW_004955445:11,295,500...11,303,322
Ensembl chrNW_004955445:11,295,448...11,303,288 		JBrowse link
G Nos3 nitric oxide synthase 3 ISO RGD PMID:29161690 RGD:13504739 NCBI chrNW_004955491:5,438,228...5,457,308
Ensembl chrNW_004955491:5,438,010...5,460,814 		JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 acts_upstream_of_or_within ISO (PMID:10787428) MGI PMID:10787428 NCBI chrNW_004955402:11,699,434...11,742,899
Ensembl chrNW_004955402:11,699,434...11,742,899 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (PMID:9568716) BHF-UCL PMID:9568716 NCBI chrNW_004955429:14,814,690...14,936,869
Ensembl chrNW_004955429:14,873,908...14,937,387 		JBrowse link
G Serpine1 serpin family E member 1 ISO RGD PMID:11057874 RGD:8547812 NCBI chrNW_004955456:16,147,523...16,157,040
Ensembl chrNW_004955456:16,145,944...16,157,142 		JBrowse link
G Socs5 suppressor of cytokine signaling 5 involved_in ISO (MGI:5659826|PMID:24255059) BHF-UCL PMID:24255059 MGI:5659826 NCBI chrNW_004955441:13,593,342...13,657,389
Ensembl chrNW_004955441:13,593,342...13,657,389 		JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 involved_in ISO (PMID:15358760) BHF-UCL PMID:15358760 NCBI chrNW_004955413:27,271,717...27,326,655
Ensembl chrNW_004955413:27,271,953...27,326,759 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in ISO (MGI:5700288|PMID:23395392) UniProt PMID:23395392 MGI:5700288 NCBI chrNW_004955515:1,328,793...1,400,206
Ensembl chrNW_004955515:1,328,630...1,380,581 		JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISO (PMID:32141990) BHF-UCL PMID:32141990 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441 		JBrowse link
cellular response to oxidised low-density lipoprotein particle stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adtrp androgen dependent TFPI regulating protein involved_in ISO (PMID:28341552) BHF-UCL PMID:28341552 NCBI chrNW_004955465:2,721,171...2,823,368
Ensembl chrNW_004955465:2,742,169...2,809,790 		JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:28341552) BHF-UCL PMID:28341552 NCBI chrNW_004955538:3,208,711...3,224,386
Ensembl chrNW_004955538:3,208,710...3,229,904 		JBrowse link
G Cd36 CD36 molecule (CD36 blood group) involved_in ISO (PMID:27607416) ARUK-UCL PMID:27607416 NCBI chrNW_004955410:5,003,720...5,120,903
Ensembl chrNW_004955410:5,003,668...5,075,313 		JBrowse link
G Cd68 CD68 molecule involved_in ISO (MGI:6274946|PMID:16157452) ARUK-UCL PMID:16157452 MGI:6274946 NCBI chrNW_004955467:9,340,490...9,343,912
Ensembl chrNW_004955467:9,341,364...9,343,836 		JBrowse link
G Mia3 MIA SH3 domain ER export factor 3 involved_in ISO (PMID:28341552) BHF-UCL PMID:28341552 NCBI chrNW_004955520:1,853,145...1,890,338
Ensembl chrNW_004955520:1,850,942...1,890,390 		JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in ISO (MGI:4438693|PMID:20037584) ARUK-UCL PMID:20037584 MGI:4438693 NCBI chrNW_004955427:25,553,589...25,557,654
Ensembl chrNW_004955427:25,553,589...25,559,138 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 acts_upstream_of_or_within ISO (PMID:20352118) MGI PMID:20352118 NCBI chrNW_004955484:8,207,686...8,298,164
Ensembl chrNW_004955484:8,272,572...8,298,144 		JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 involved_in ISO (MGI:4438693|PMID:20037584) ARUK-UCL PMID:20037584 MGI:4438693 NCBI chrNW_004955495:4,197,083...4,204,999
Ensembl chrNW_004955495:4,202,372...4,204,513 		JBrowse link
G Tlr4 toll like receptor 4 involved_in ISO (MGI:4438693|PMID:20037584)
(PMID:20037584)		 ARUK-UCL
ComplexPortal		 PMID:20037584 MGI:4438693 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135 		JBrowse link
G Tlr6 toll like receptor 6 involved_in ISO (MGI:4438693|PMID:20037584)
(PMID:20037584)		 ARUK-UCL
ComplexPortal		 PMID:20037584 MGI:4438693 NCBI chrNW_004955443:8,401,461...8,427,175
Ensembl chrNW_004955443:8,422,534...8,424,942 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:31902528) ARUK-UCL PMID:31902528 NCBI chrNW_004955437:7,780,886...7,785,597
Ensembl chrNW_004955437:7,780,679...7,785,697 		JBrowse link
low-density lipoprotein particle mediated signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in ISO (PMID:26005850) ARUK-UCL PMID:26005850 NCBI chrNW_004955407:25,725,259...25,973,582
Ensembl chrNW_004955407:25,722,849...25,974,268 		JBrowse link
G Cd36 CD36 molecule (CD36 blood group) involved_in ISO (MGI:4850200|PMID:20978343) BHF-UCL PMID:20978343 MGI:4850200 NCBI chrNW_004955410:5,003,720...5,120,903
Ensembl chrNW_004955410:5,003,668...5,075,313 		JBrowse link
G Cdh13 cadherin 13 involved_in ISO (PMID:16013438) BHF-UCL PMID:16013438 NCBI chrNW_004955564:407,120...1,549,880
Ensembl chrNW_004955564:408,730...1,426,841 		JBrowse link
G Lpl lipoprotein lipase involved_in ISO (PMID:25149060) BHF-UCL PMID:25149060 NCBI chrNW_004955403:43,646,084...43,672,116
Ensembl chrNW_004955403:43,646,084...43,673,967 		JBrowse link
regulation of cellular response to very-low-density lipoprotein particle stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO (PMID:7592957) ARUK-UCL PMID:7592957 NCBI chrNW_004955555:1,998,170...2,002,003
Ensembl chrNW_004955555:1,999,711...2,001,888 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12346
    response to stimulus 6681
      cellular response to stimulus 5381
        cellular response to lipoprotein particle stimulus 40
          cellular response to high density lipoprotein particle stimulus + 6
          cellular response to low-density lipoprotein particle stimulus + 34
          cellular response to very-low-density lipoprotein particle stimulus + 1
          lipoprotein particle mediated signaling + 4
paths to the root