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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to lipoprotein particle stimulus
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Accession:GO:0071402 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipoprotein particle stimulus.


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cellular response to lipoprotein particle stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl2 C-C motif chemokine ligand 2 IEP lipoprotein-X RGD PMID:11473635 RGD:8549581 NCBI chr10:69,412,065...69,413,863
Ensembl chr10:69,412,017...69,413,870
JBrowse link
cellular response to high density lipoprotein particle stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 NOT|involved_in ISO (MGI:3047008|PMID:15210959) RGD PMID:15210959 MGI:3047008 NCBI chr 5:69,857,717...69,983,042
Ensembl chr 5:69,857,771...69,983,015
JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO (MGI:3047008|PMID:15210959) RGD PMID:15210959 MGI:3047008 NCBI chr20:9,743,269...9,842,735
Ensembl chr20:9,743,269...9,840,489
JBrowse link
G Adam17 ADAM metallopeptidase domain 17 involved_in IEA
ISO
GO_REF:0000107
(PMID:17786981)
Ensembl
RGD
PMID:17786981 GO_REF:0000107 NCBI chr 6:43,400,525...43,448,280
Ensembl chr 6:43,400,528...43,448,280
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 IEP thrombin-stimulated vascular smooth muscle cells RGD PMID:18483405 RGD:8549650 NCBI chr10:69,412,065...69,413,863
Ensembl chr10:69,412,017...69,413,870
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 IEP oxidized HDL RGD PMID:20623482 RGD:4889888 NCBI chr10:70,739,764...70,744,303
Ensembl chr10:70,739,800...70,744,315
JBrowse link
G Nos3 nitric oxide synthase 3 IEP RGD PMID:17918268 RGD:2292126 NCBI chr 4:7,321,908...7,342,404
Ensembl chr 4:7,320,668...7,342,410
JBrowse link
cellular response to low-density lipoprotein particle stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casr calcium-sensing receptor IEP oxidized LDL RGD PMID:22083546 RGD:7205681 NCBI chr11:67,188,204...67,262,261
Ensembl chr11:67,188,630...67,258,771
JBrowse link
G Cd36 CD36 molecule involved_in ISS
ISO
GO_REF:0000024
(MGI:5700288|PMID:23395392)
UniProt
RGD
PMID:23395392 GO_REF:0000024 MGI:5700288 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Cd81 Cd81 molecule involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5700288|PMID:23395392)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23395392 GO_REF:0000024 GO_REF:0000107 MGI:5700288 NCBI chr 1:216,237,663...216,253,460
Ensembl chr 1:216,237,697...216,253,311
JBrowse link
G Cd9 CD9 molecule involved_in ISS
ISO
GO_REF:0000024
(MGI:5700288|PMID:23395392)
UniProt
RGD
PMID:23395392 GO_REF:0000024 MGI:5700288 NCBI chr 4:157,977,163...158,010,091
Ensembl chr 4:157,977,162...158,010,166
JBrowse link
G Ces1d carboxylesterase 1D involved_in ISO (PMID:18762277) RGD PMID:18762277 NCBI chr19:15,195,514...15,239,827
Ensembl chr19:15,033,108...15,239,821
JBrowse link
G F3 coagulation factor III, tissue factor IEP RGD PMID:10190887 RGD:2313771 NCBI chr 2:225,310,686...225,322,281
Ensembl chr 2:225,310,624...225,322,272
JBrowse link
G Fcer1g Fc fragment of IgE receptor Ig involved_in ISS
ISO
GO_REF:0000024
(MGI:5700288|PMID:23395392)
UniProt
RGD
PMID:23395392 GO_REF:0000024 MGI:5700288 NCBI chr13:89,601,894...89,606,326
Ensembl chr13:89,601,896...89,606,326
JBrowse link
G Fgf21 fibroblast growth factor 21 IEP RGD PMID:22166524 RGD:10401877 NCBI chr 1:101,595,579...101,596,822
Ensembl chr 1:101,595,579...101,596,822
JBrowse link
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 IDA RGD PMID:16260 RGD:2302235 NCBI chr 2:52,427,351...52,445,082
Ensembl chr 2:52,431,601...52,445,055
JBrowse link
G Itgb1 integrin subunit beta 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5700288|PMID:23395392)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23395392 GO_REF:0000024 GO_REF:0000107 MGI:5700288 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
G Itgb2 integrin subunit beta 2 involved_in ISO (MGI:5700288|PMID:23395392) RGD PMID:23395392 MGI:5700288 NCBI chr20:11,777,773...11,815,647
Ensembl chr20:11,777,783...11,815,647
JBrowse link
G Ldlr low density lipoprotein receptor involved_in ISO (PMID:6299582) RGD PMID:6299582 NCBI chr 8:22,750,425...22,773,305
Ensembl chr 8:22,750,336...22,774,903
JBrowse link
G Mfn2 mitofusin 2 IEP RGD PMID:26062420 RGD:13204747 NCBI chr 5:164,684,244...164,715,414
Ensembl chr 5:164,684,509...164,714,145
JBrowse link
G Mmp9 matrix metallopeptidase 9 IEP RGD PMID:19554388 RGD:2325827 NCBI chr 3:161,413,410...161,421,473
Ensembl chr 3:161,413,298...161,421,520
JBrowse link
G Nos3 nitric oxide synthase 3 IEP RGD PMID:29161690 RGD:13504739 NCBI chr 4:7,321,908...7,342,404
Ensembl chr 4:7,320,668...7,342,410
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 acts_upstream_of_or_within ISO (MGI:3706740|PMID:10787428) RGD PMID:10787428 MGI:3706740 NCBI chr18:3,616,878...3,662,656
Ensembl chr18:3,616,878...3,662,683
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma involved_in ISO (PMID:9568716) RGD PMID:9568716 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link
G Serpine1 serpin family E member 1 IEP RGD PMID:11057874 RGD:8547812 NCBI chr12:22,641,104...22,651,482
Ensembl chr12:22,641,104...22,651,482
JBrowse link
G Socs5 suppressor of cytokine signaling 5 involved_in ISO (MGI:5659826|PMID:24255059) RGD PMID:24255059 MGI:5659826 NCBI chr 6:10,671,311...10,705,610
Ensembl chr 6:10,674,371...10,704,977
JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 involved_in ISO
IEA
(PMID:15358760)
GO_REF:0000107
RGD
Ensembl
PMID:15358760 GO_REF:0000107 NCBI chr 7:123,381,082...123,438,605
Ensembl chr 7:123,381,077...123,438,603
JBrowse link
G Syk spleen associated tyrosine kinase involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5700288|PMID:23395392)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23395392 GO_REF:0000024 GO_REF:0000107 MGI:5700288 NCBI chr17:12,614,311...12,669,568
Ensembl chr17:12,614,311...12,669,573
JBrowse link
cellular response to oxidised low-density lipoprotein particle stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adtrp androgen-dependent TFPI-regulating protein involved_in ISO
IEA
(PMID:28341552)
GO_REF:0000107
RGD
Ensembl
PMID:28341552 GO_REF:0000107 NCBI chr17:22,619,913...22,688,296
Ensembl chr17:22,619,891...22,688,307
JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:28341552) RGD PMID:28341552 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Cd36 CD36 molecule involved_in ISO (PMID:27607416) RGD PMID:27607416 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Cd68 Cd68 molecule involved_in ISO (MGI:6274946|PMID:16157452) RGD PMID:16157452 MGI:6274946 NCBI chr10:56,268,726...56,270,605
Ensembl chr10:56,268,720...56,270,640
JBrowse link
G Mia3 MIA SH3 domain ER export factor 3 involved_in ISO (PMID:28341552) RGD PMID:28341552 NCBI chr13:101,727,434...101,770,127
Ensembl chr13:101,727,935...101,761,541
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor involved_in ISO (MGI:4438693|PMID:20037584) RGD PMID:20037584 MGI:4438693 NCBI chr 8:128,022,512...128,027,462
Ensembl chr 8:128,022,473...128,026,841
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856877 (MGI:4440357|PMID:20352118)
Ensembl
RGD
PMID:20352118 GO_REF:0000107 MGI:4440357 NCBI chr19:38,237,963...38,321,572
Ensembl chr19:38,237,965...38,321,528
JBrowse link
G Ticam1 toll-like receptor adaptor molecule 1 involved_in ISO (MGI:4438693|PMID:20037584) RGD PMID:20037584 MGI:4438693 NCBI chr 9:10,780,185...10,790,280 JBrowse link
G Tlr4 toll-like receptor 4 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:Q9Y2C9 (MGI:4438693|PMID:20037584)
Ensembl
RGD
PMID:20037584 GO_REF:0000107 MGI:4438693 NCBI chr 5:82,587,424...82,601,056
Ensembl chr 5:82,587,420...82,601,052
JBrowse link
G Tlr6 toll-like receptor 6 involved_in ISO UniProtKB:O00206 (MGI:4438693|PMID:20037584) RGD PMID:20037584 MGI:4438693 NCBI chr14:45,024,351...45,041,188
Ensembl chr14:45,024,351...45,046,446
JBrowse link
low-density lipoprotein particle mediated signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule involved_in ISO (MGI:4850200|PMID:20978343) RGD PMID:20978343 MGI:4850200 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Cdh13 cadherin 13 involved_in ISO (PMID:16013438) RGD PMID:16013438 NCBI chr19:50,848,793...51,971,618
Ensembl chr19:50,848,736...51,972,103
JBrowse link
G Lpl lipoprotein lipase involved_in ISO (PMID:25149060) RGD PMID:25149060 NCBI chr16:22,537,687...22,561,487
Ensembl chr16:22,537,056...22,561,496
JBrowse link
regulation of cellular response to very-low-density lipoprotein particle stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO
IEA
(PMID:7592957)
GO_REF:0000107
RGD
Ensembl
PMID:7592957 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link

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