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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to fatty acid
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Accession:GO:0071398 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fatty acid stimulus.



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cellular response to fatty acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat2 acetyl-CoA acetyltransferase 2 IEP fish oil chylomicron remnants RGD PMID:11786296 RGD:1598704 NCBI chr 1:47,695,833...47,713,879
Ensembl chr 1:47,695,788...47,752,821
JBrowse link
G Adipor2 adiponectin receptor 2 IEP RGD PMID:21194380 RGD:24922202 NCBI chr 4:152,524,604...152,588,848
Ensembl chr 4:152,524,623...152,559,355
JBrowse link
G Ager advanced glycosylation end product-specific receptor IEP RGD PMID:22217518 RGD:7245568 NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
JBrowse link
G Aldh2 aldehyde dehydrogenase 2 family member IEP RGD PMID:11463352 RGD:2306342 NCBI chr12:34,949,549...34,982,527
Ensembl chr12:34,901,219...34,982,521
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 IEP leukotriene B4 RGD PMID:14656734 RGD:11526147 NCBI chr10:67,005,424...67,007,222
Ensembl chr10:67,005,424...67,007,226
JBrowse link
G Ccnb1 cyclin B1 IEP butyrate RGD PMID:14674679 RGD:2316349 NCBI chr 2:31,912,190...31,921,163
Ensembl chr 2:31,912,193...31,921,172
JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A IEP palmitate RGD PMID:19332540 RGD:7242708 NCBI chr 1:200,564,634...200,627,059
Ensembl chr 1:200,565,613...200,627,055
JBrowse link
G Creb1 cAMP responsive element binding protein 1 IEP RGD PMID:16382163 RGD:10059371 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
JBrowse link
G E2f1 E2F transcription factor 1 IEP RGD PMID:19180667 RGD:2316259 NCBI chr 3:143,064,535...143,075,362
Ensembl chr 3:143,049,478...143,075,361
JBrowse link
G Edn1 endothelin 1 IEP lysophosphatidic acid RGD PMID:9784597 RGD:8662270 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Fdps farnesyl diphosphate synthase IEP RGD PMID:15473864 RGD:2316296 NCBI chr 2:174,497,402...174,507,031
Ensembl chr 2:174,486,665...174,507,776
JBrowse link
G Ffar2 free fatty acid receptor 2 involved_in ISO
IBA
IDA
(PMID:12496283), (PMID:18801738), (PMID:23589301)
PMID:21873635
(MGI:4366644|PMID:19865172), (MGI:5572877|PMID:16123168), (MGI:5574283|PMID:23589301), (MGI:5575446|PMID:23665276)
RGD PMID:12496283 PMID:16123168 PMID:18801738 PMID:19865172 PMID:23589301 More... MGI:4366644 MGI:5572877 MGI:5574283 MGI:5575446, RGD:13792537, RGD:8693374 NCBI chr 1:86,071,860...86,075,049
Ensembl chr 1:86,072,184...86,075,033
JBrowse link
G Ffar3 free fatty acid receptor 3 involved_in ISO
IBA
IDA
(PMID:12496283), (PMID:14722361), (PMID:18801738)
PMID:21873635
(MGI:5429475|PMID:22673524), (MGI:5572885|PMID:14722361), (MGI:5575446|PMID:23665276)
RGD PMID:12496283 PMID:14722361 PMID:18801738 PMID:22673524 PMID:23665276 More... MGI:5429475 MGI:5572885 MGI:5575446, RGD:13792537, RGD:8693366 NCBI chr 1:86,105,388...86,106,728
Ensembl chr 1:86,104,920...86,106,849
JBrowse link
G Hes1 hes family bHLH transcription factor 1 IEP docosahexaenoic acid RGD PMID:19272428 RGD:9685381 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 IEP vaccenic acid, elaidic acid RGD PMID:20508999 RGD:2326106 NCBI chr 2:185,875,609...185,903,505
Ensembl chr 2:185,875,616...185,902,130
JBrowse link
G Il1b interleukin 1 beta IEP RGD PMID:23086551 RGD:7204439 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
JBrowse link
G Irs1 insulin receptor substrate 1 involved_in ISO (MGI:6282942|PMID:21986524) RGD PMID:21986524 MGI:6282942 NCBI chr 9:83,552,964...83,605,797
Ensembl chr 9:83,548,944...83,606,122
JBrowse link
G Kcnk4 potassium two pore domain channel subfamily K member 4 involved_in IDA
ISO
PMID:15677687
(PMID:22282805)
RGD PMID:22282805 PMID:15677687 RGD:10047327 NCBI chr 1:204,117,941...204,129,494
Ensembl chr 1:204,114,572...204,125,925
JBrowse link
G Ldlr low density lipoprotein receptor involved_in ISO RNAcentral:URS0000329B12_10090 (MGI:5659826|PMID:24255059) RGD PMID:24255059 MGI:5659826 NCBI chr 8:20,270,020...20,292,981
Ensembl chr 8:20,270,041...20,294,580
JBrowse link
G Lpl lipoprotein lipase involved_in ISO (MGI:6282942|PMID:21986524) RGD PMID:21986524 MGI:6282942 NCBI chr16:20,830,055...20,853,855
Ensembl chr16:20,829,465...20,855,249
JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 IEP palmitate RGD PMID:19367376 RGD:5132883 NCBI chr10:78,907,036...78,929,659
Ensembl chr10:78,906,083...78,916,408
JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 IEP palmitate RGD PMID:19367376 RGD:5132883 NCBI chr10:78,898,097...78,903,600
Ensembl chr10:78,897,770...78,903,538
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in ISO
IEA
(PMID:20447400)
GO_REF:0000107
RGD
Ensembl
PMID:20447400 GO_REF:0000107 NCBI chr 7:23,846,122...23,942,085
Ensembl chr 7:23,846,122...23,942,047
JBrowse link
G Olr59 olfactory receptor 59 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5574287|PMID:23401498)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23401498 GO_REF:0000024 GO_REF:0000107 MGI:5574287 NCBI chr 1:157,193,051...157,227,707
Ensembl chr 1:157,193,080...157,211,179
JBrowse link
G Pdk3 pyruvate dehydrogenase kinase 3 involved_in ISO (PMID:20715114) RGD PMID:20715114 NCBI chr  X:58,477,471...58,553,932
Ensembl chr  X:58,486,554...58,553,557
JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 involved_in ISO
ISS
(PMID:20715114)
GO_REF:0000024
RGD
UniProt
PMID:20715114 GO_REF:0000024 NCBI chr 4:33,591,796...33,601,798
Ensembl chr 4:33,589,799...33,601,850
JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 involved_in ISO (MGI:5308004|PMID:19894142) RGD PMID:19894142 MGI:5308004 NCBI chr 9:85,284,335...85,503,035
Ensembl chr 9:85,284,335...85,503,044
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 IEP linoleic acid RGD PMID:17593346 RGD:4108505 NCBI chr 2:32,878,942...32,963,611
Ensembl chr 2:32,882,032...32,963,631
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:22676303 RGD:7242169 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
JBrowse link
G Ptafr platelet-activating factor receptor IEP arachidonic acid, docosahexaenoic acid RGD PMID:17515866 RGD:9999208 NCBI chr 5:144,765,770...144,795,057
Ensembl chr 5:144,765,976...144,795,251
JBrowse link
G Slc2a2 solute carrier family 2 member 2 IDA 20-HETE (20-Hydroxyeicosatetraenoic acid) RGD PMID:27568038 RGD:151347627 NCBI chr 2:111,609,798...111,639,930
Ensembl chr 2:111,611,774...111,639,933
JBrowse link
G Smarcd1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 IEP RGD PMID:24615205 RGD:9586357 NCBI chr 7:130,829,783...130,840,323
Ensembl chr 7:130,829,768...130,840,323
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase IEP butyrate RGD PMID:20149623 RGD:2325014 NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 IEP palmitate RGD PMID:19332540 RGD:7242708 NCBI chr10:45,007,637...45,029,650
Ensembl chr10:45,007,637...45,029,650
JBrowse link
G Ucp1 uncoupling protein 1 involved_in IDA
ISO
PMID:22952235
(MGI:5444314|PMID:23063128)
RGD PMID:23063128 PMID:22952235 MGI:5444314, RGD:11541104 NCBI chr19:24,808,782...24,816,853
Ensembl chr19:24,808,783...24,816,852
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 IEP RGD PMID:19180667 RGD:2316259 NCBI chr 9:73,955,220...74,044,020
Ensembl chr 9:73,955,216...74,044,018
JBrowse link
cellular response to butyrate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn1 claudin 1 IEP RGD PMID:22684624 RGD:11341733 NCBI chr11:74,421,569...74,436,728
Ensembl chr11:74,421,569...74,436,724
JBrowse link
G Hspb1 heat shock protein family B (small) member 1 IEP RGD PMID:11522747 RGD:10402752 NCBI chr12:20,794,014...20,795,675
Ensembl chr12:20,794,028...20,795,743
JBrowse link
cellular response to ionomycin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk4 cyclin-dependent kinase 4 acts_upstream_of_or_within ISO (MGI:78049|PMID:8543804) RGD PMID:8543804 MGI:78049 NCBI chr 7:62,885,647...62,889,562
Ensembl chr 7:62,883,105...62,942,403
JBrowse link
G Foxp1 forkhead box P1 IDA RGD PMID:21606195 RGD:11561924 NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
JBrowse link
G Nfatc4 nuclear factor of activated T-cells 4 IDA RGD PMID:21606195 RGD:11561924 NCBI chr15:29,286,998...29,314,610
Ensembl chr15:29,305,535...29,314,610
JBrowse link
G Plcb1 phospholipase C beta 1 IDA RGD PMID:11377826 RGD:8554253 NCBI chr 3:122,059,968...122,772,896
Ensembl chr 3:122,060,031...122,772,869
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:17516843 RGD:10059651 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISS
ISO
GO_REF:0000024
(MGI:5706909|PMID:23185455)
UniProt
RGD
PMID:23185455 GO_REF:0000024 MGI:5706909 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
JBrowse link
G Zfp683 zinc finger protein 683 involved_in ISO (PMID:26179882) RGD PMID:26179882 NCBI chr 5:146,277,972...146,285,856
Ensembl chr 5:146,278,978...146,285,000
JBrowse link
cellular response to jasmonic acid stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1c1 aldo-keto reductase family 1, member C1 involved_in ISO (PMID:19487289) RGD PMID:19487289 NCBI chr17:65,810,474...65,837,385
Ensembl chr17:65,810,475...65,837,326
JBrowse link
G Akr1c2 aldo-keto reductase family 1, member C2 involved_in ISO (PMID:19487289) RGD PMID:19487289 NCBI chr17:65,759,778...65,808,013
Ensembl chr17:65,759,788...65,775,764
JBrowse link
G Akr1c3 aldo-keto reductase family 1, member C3 involved_in ISO (PMID:19487289) RGD PMID:19487289 NCBI chr17:66,110,970...66,127,867
Ensembl chr17:66,110,963...66,127,873
JBrowse link
cellular response to leptomycin B term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Id3 inhibitor of DNA binding 3, HLH protein acts_upstream_of_or_within ISO (MGI:5512805|PMID:23523789) RGD PMID:23523789 MGI:5512805 NCBI chr 5:148,372,784...148,374,353
Ensembl chr 5:148,372,762...148,374,349
JBrowse link
G Ranbp1 RAN binding protein 1 IDA RGD PMID:10421839 RGD:9834999 NCBI chr11:82,742,603...82,750,836
Ensembl chr11:82,742,600...82,750,838
JBrowse link
cellular response to oleic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ass1 argininosuccinate synthase 1 IEP dexamethasone-stimulated hepatocytes RGD PMID:8985169 RGD:2303518 NCBI chr 3:14,747,355...14,796,909
Ensembl chr 3:14,747,368...14,796,903
JBrowse link
G Cps1 carbamoyl-phosphate synthase 1 IEP dexamethasone-stimulated hepatocytes RGD PMID:8985169 RGD:2303518 NCBI chr 9:68,614,153...68,737,037
Ensembl chr 9:68,614,153...68,737,033
JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 involved_in ISO (MGI:5293272|PMID:21680734) RGD PMID:21680734 MGI:5293272 NCBI chr 1:153,454,078...153,484,432
Ensembl chr 1:153,454,080...153,484,428
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18877
    response to stimulus 10238
      cellular response to stimulus 8676
        cellular response to chemical stimulus 3594
          cellular response to oxygen-containing compound 1650
            cellular response to fatty acid 52
              cellular response to arachidonic acid 0
              cellular response to butyrate 2
              cellular response to ionomycin 7
              cellular response to jasmonic acid stimulus + 3
              cellular response to leptomycin B 2
              cellular response to leukotriene B4 0
              cellular response to linoleic acid 0
              cellular response to lipoic acid 0
              cellular response to oleic acid 3
              cellular response to palmitoleic acid 0
Path 2
Term Annotations click to browse term
  biological_process 18877
    response to stimulus 10238
      response to chemical 6178
        response to organic substance 3915
          response to lipid 1433
            response to fatty acid 105
              cellular response to fatty acid 52
                cellular response to arachidonic acid 0
                cellular response to butyrate 2
                cellular response to ionomycin 7
                cellular response to jasmonic acid stimulus + 3
                cellular response to leptomycin B 2
                cellular response to leukotriene B4 0
                cellular response to linoleic acid 0
                cellular response to lipoic acid 0
                cellular response to oleic acid 3
                cellular response to palmitoleic acid 0
paths to the root