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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to dsRNA
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Accession:GO:0071359 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a double-stranded RNA stimulus.
Synonyms:exact_synonym: cellular response to double-stranded RNA



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cellular response to dsRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 IEP miR-132 RGD PMID:19958814 RGD:2325933 NCBI chr10:41,210,713...41,527,283
Ensembl chr10:41,210,713...41,527,283
JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IEP miR-132 RGD PMID:19958814 RGD:2325933 NCBI chr10:5,630,684...6,043,341
Ensembl chr10:5,631,369...6,044,637
JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B IEP miR-132 RGD PMID:19958814 RGD:2325933 NCBI chr 4:168,580,824...169,044,110
Ensembl chr 4:168,599,546...169,042,279
JBrowse link
G Ifnb1 interferon beta 1 involved_in ISO (MGI:3814787|PMID:18596219) RGD PMID:18596219 MGI:3814787 NCBI chr 5:103,020,969...103,021,523
Ensembl chr 5:103,020,969...103,021,523
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1857225 (MGI:5604160|PMID:24114535)
GO_REF:0000107
RGD
Ensembl
PMID:24114535 GO_REF:0000107 MGI:5604160 NCBI chr 2:224,016,214...224,132,135
Ensembl chr 2:224,016,214...224,110,404
JBrowse link
G P2rx7 purinergic receptor P2X 7 acts_upstream_of_or_within ISO MGI:2386080 (MGI:5604160|PMID:24114535) RGD PMID:24114535 MGI:5604160 NCBI chr12:33,889,709...33,934,168
Ensembl chr12:33,879,745...33,934,619
JBrowse link
G Pde12 phosphodiesterase 12 involved_in IEA
ISO
GO_REF:0000107
(PMID:15231837)
Ensembl
RGD
PMID:15231837 GO_REF:0000107 NCBI chr16:1,915,386...1,925,427
Ensembl chr16:1,915,386...1,925,887
JBrowse link
G Riok3 RIO kinase 3 involved_in ISO (PMID:24807708) RGD PMID:24807708 NCBI chr18:3,327,776...3,353,350
Ensembl chr18:3,327,776...3,353,343
JBrowse link
cellular response to exogenous dsRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in ISO
IEA
(PMID:25204797)
GO_REF:0000107
RGD
Ensembl
PMID:25204797 GO_REF:0000107 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Cgas cyclic GMP-AMP synthase involved_in ISO
IBA
(MGI:5487472|PMID:23258413), (MGI:5897489|PMID:28363908), (MGI:5897502|PMID:28214358), (MGI:5908326|PMID:24077100)
PMID:21873635
RGD PMID:23258413 PMID:24077100 PMID:28214358 PMID:28363908 PMID:21873635 MGI:5487472 MGI:5897489 MGI:5897502 MGI:5908326, RGD:13792537 NCBI chr 8:79,292,282...79,306,998
Ensembl chr 8:79,294,511...79,305,496
JBrowse link
G Ciita class II, major histocompatibility complex, transactivator IEP RGD PMID:10051633 RGD:7242894 NCBI chr10:5,139,947...5,187,493
Ensembl chr10:5,140,178...5,187,440
JBrowse link
G Colec12 collectin sub-family member 12 involved_in
NOT|involved_in
ISO (PMID:25204797) RGD PMID:25204797 NCBI chr18:732,950...920,620
Ensembl chr18:732,950...920,618
JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:21957149) RGD PMID:21957149 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
JBrowse link
G Flot1 flotillin 1 involved_in ISO (PMID:25204797) RGD PMID:25204797 NCBI chr20:2,917,864...2,927,993
Ensembl chr20:2,917,137...2,927,978
JBrowse link
G Ifih1 interferon induced with helicase C domain 1 involved_in ISO (PMID:21957149) RGD PMID:21957149 NCBI chr 3:47,228,980...47,275,403
Ensembl chr 3:47,227,364...47,275,456
JBrowse link
G Irf1 interferon regulatory factor 1 IEP RGD PMID:11694343 RGD:5128789 NCBI chr10:37,917,155...37,924,166
Ensembl chr10:37,916,670...37,924,166
JBrowse link
G Irf3 interferon regulatory factor 3 IEP RGD PMID:18223009 RGD:5128810 NCBI chr 1:95,479,966...95,484,926
Ensembl chr 1:95,479,821...95,484,935
JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISS
ISO
GO_REF:0000024
(PMID:16127453), (PMID:21957149)
UniProt
RGD
PMID:16127453 PMID:21957149 GO_REF:0000024 NCBI chr 3:118,451,650...118,466,094
Ensembl chr 3:118,451,743...118,466,094
JBrowse link
G Mul1 mitochondrial E3 ubiquitin protein ligase 1 involved_in ISO (PMID:23399697) RGD PMID:23399697 NCBI chr 5:150,652,812...150,661,863
Ensembl chr 5:150,652,812...150,661,863
JBrowse link
G Pqbp1 polyglutamine binding protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:26046437)
UniProt
RGD
PMID:26046437 GO_REF:0000024 NCBI chr  X:14,603,516...14,608,091
Ensembl chr  X:14,603,539...14,608,087
JBrowse link
G Ralb RAS like proto-oncogene B involved_in ISO
IEA
(PMID:24056301)
GO_REF:0000107
RGD
Ensembl
PMID:24056301 GO_REF:0000107 NCBI chr13:30,588,036...30,624,199
Ensembl chr13:30,588,033...30,624,202
JBrowse link
G Rig1 RNA sensor RIG-1 involved_in ISO (PMID:21957149) RGD PMID:21957149 NCBI chr 5:55,321,229...55,369,947
Ensembl chr 5:55,321,235...55,370,819
JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISO
IEA
(PMID:18818105)
GO_REF:0000107
RGD
Ensembl
PMID:18818105 GO_REF:0000107 NCBI chr18:27,332,119...27,338,371
Ensembl chr18:27,332,119...27,338,335
JBrowse link
G Tlr3 toll-like receptor 3 IEP
IMP
RGD PMID:20937230 PMID:15920723 RGD:5128701, RGD:2301737 NCBI chr16:46,821,980...46,837,900
Ensembl chr16:46,822,039...46,836,545
JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 acts_upstream_of_or_within ISO (MGI:4868308|PMID:21102435) RGD PMID:21102435 MGI:4868308 NCBI chr 4:67,012,151...67,062,406
Ensembl chr 4:67,012,185...67,062,428
JBrowse link
G Zcchc3 zinc finger CCHC-type containing 3 involved_in ISO
IBA
(PMID:30193849)
(MGI:6271678|PMID:30193849)
PMID:21873635
RGD PMID:30193849 PMID:21873635 MGI:6271678, RGD:13792537 NCBI chr 3:140,872,460...140,875,851
Ensembl chr 3:140,872,460...140,882,408
JBrowse link
regulation of eIF2 alpha phosphorylation by dsRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Npm1 nucleophosmin 1 involved_in ISO
ISS
(PMID:12882984)
GO_REF:0000024
RGD
UniProt
PMID:12882984 GO_REF:0000024 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19818
    response to stimulus 10522
      cellular response to stimulus 8857
        cellular response to chemical stimulus 3240
          cellular response to nitrogen compound 964
            cellular response to dsRNA 27
              cellular response to exogenous dsRNA 18
              regulation of eIF2 alpha phosphorylation by dsRNA 1
Path 2
Term Annotations click to browse term
  biological_process 19818
    response to stimulus 10522
      response to chemical 6069
        response to organic substance 3748
          response to organic cyclic compound 1489
            response to dsRNA 54
              cellular response to dsRNA 27
                cellular response to exogenous dsRNA 18
                regulation of eIF2 alpha phosphorylation by dsRNA 1
paths to the root