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ONTOLOGY REPORT - ANNOTATIONS

Term:cellular response to dsRNA
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Accession:GO:0071359 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a double-stranded RNA stimulus.
Synonyms:exact_synonym: cellular response to double-stranded RNA

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cellular response to dsRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 IEP miR-132 RGD PMID:19958814 RGD:2325933 NCBI chr10:42,441,723...42,760,200
Ensembl chr10:42,614,713...42,760,200 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A IEP miR-132 RGD PMID:19958814 RGD:2325933 NCBI chr10:5,707,806...6,123,568
Ensembl chr10:5,930,298...6,119,990 		JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B IEP miR-132 RGD PMID:19958814 RGD:2325933 NCBI chr 4:169,541,620...170,000,216
Ensembl chr 4:169,560,387...169,999,873 		JBrowse link
G Ifnb1 interferon beta 1 ISO (PMID:18596219) RGD PMID:18596219 NCBI chr 5:106,865,192...106,865,746
Ensembl chr 5:106,865,192...106,865,746 		JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 IEA
ISO		 GO_REF:0000107
MGI:1857225 (MGI:5604160|PMID:24114535)		 Ensembl
RGD		 PMID:24114535 GO_REF:0000107 MGI:5604160 NCBI chr 2:240,773,520...240,890,053
Ensembl chr 2:240,773,456...240,866,689 		JBrowse link
G P2rx7 purinergic receptor P2X 7 ISO MGI:2386080 (MGI:5604160|PMID:24114535) RGD PMID:24114535 MGI:5604160 NCBI chr12:39,353,613...39,396,042
Ensembl chr12:39,353,613...39,396,042 		JBrowse link
G Pde12 phosphodiesterase 12 IEA
ISO		 GO_REF:0000107
(PMID:15231837)		 Ensembl
RGD		 PMID:15231837 GO_REF:0000107 NCBI chr16:2,357,028...2,367,069
Ensembl chr16:2,357,028...2,367,253 		JBrowse link
G Riok3 RIO kinase 3 ISO (PMID:24807708) RGD PMID:24807708 NCBI chr18:3,565,166...3,590,739
Ensembl chr18:3,565,166...3,590,739 		JBrowse link
cellular response to exogenous dsRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 IEA
ISO		 GO_REF:0000107
(PMID:25204797)		 Ensembl
RGD		 PMID:25204797 GO_REF:0000107 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200 		JBrowse link
G Cgas cyclic GMP-AMP synthase ISO
IBA		 (PMID:23258413), (PMID:24077100), (PMID:28214358), (PMID:28363908)
(MGI:5487472|PMID:23258413), (MGI:5897489|PMID:28363908), (MGI:5897502|PMID:28214358), (MGI:5908326|PMID:24077100)
PMID:21873635		 RGD PMID:23258413 PMID:24077100 PMID:28214358 PMID:28363908, PMID:21873635 MGI:5487472 MGI:5897489 MGI:5897502 MGI:5908326, RGD:13792537 NCBI chr 8:85,789,515...85,804,008
Ensembl chr 8:85,789,763...85,803,433 		JBrowse link
G Ciita class II, major histocompatibility complex, transactivator IEP RGD PMID:10051633 RGD:7242894 NCBI chr10:5,212,621...5,260,641
Ensembl chr10:5,213,350...5,260,608 		JBrowse link
G Colec12 collectin sub-family member 12 NOT ISO (PMID:25204797) RGD PMID:25204797 NCBI chr18:867,048...1,054,047
Ensembl chr18:867,048...1,052,606 		JBrowse link
G Ddx58 DEXD/H-box helicase 58 ISO (PMID:21957149) RGD PMID:21957149 NCBI chr 5:56,486,584...56,536,898
Ensembl chr 5:56,500,734...56,536,772 		JBrowse link
G Dhx9 DExH-box helicase 9 ISO (PMID:21957149) RGD PMID:21957149 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245 		JBrowse link
G Flot1 flotillin 1 ISO (PMID:25204797) RGD PMID:25204797 NCBI chr20:3,427,890...3,438,418
Ensembl chr20:3,427,880...3,438,396 		JBrowse link
G Ifih1 interferon induced with helicase C domain 1 ISO (PMID:21957149) RGD PMID:21957149 NCBI chr 3:48,557,696...48,604,097
Ensembl chr 3:48,557,696...48,604,097 		JBrowse link
G Ifit1bl interferon-induced protein with tetratricopeptide repeats 1B-like IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:252,914,684...252,959,348
Ensembl chr 1:252,914,684...252,922,486 		JBrowse link
G Irf1 interferon regulatory factor 1 IEP RGD PMID:11694343 RGD:5128789 NCBI chr10:39,109,530...39,116,532
Ensembl chr10:39,109,522...39,116,531 		JBrowse link
G Irf3 interferon regulatory factor 3 IEP RGD PMID:18223009 RGD:5128810 NCBI chr 1:100,992,244...100,997,202
Ensembl chr 1:100,992,405...100,997,198 		JBrowse link
G Mavs mitochondrial antiviral signaling protein ISS
ISO		 GO_REF:0000024
(PMID:16127453), (PMID:21957149)		 UniProt
RGD		 PMID:16127453 PMID:21957149 GO_REF:0000024 NCBI chr 3:123,776,147...123,790,572
Ensembl chr 3:123,776,181...123,790,567 		JBrowse link
G Mul1 mitochondrial E3 ubiquitin protein ligase 1 ISO (PMID:23399697) RGD PMID:23399697 NCBI chr 5:156,855,105...156,864,517
Ensembl chr 5:156,850,206...156,864,517 		JBrowse link
G Pqbp1 polyglutamine binding protein 1 ISO
IEA
ISS		 (PMID:26046437)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:26046437 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:15,448,570...15,453,130
Ensembl chr  X:15,348,138...15,453,130 		JBrowse link
G Ralb RAS like proto-oncogene B IEA
ISO		 GO_REF:0000107
(PMID:24056301)		 Ensembl
RGD		 PMID:24056301 GO_REF:0000107 NCBI chr13:35,494,716...35,531,503
Ensembl chr13:35,494,721...35,511,020 		JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 ISO (PMID:18818105) RGD PMID:18818105 NCBI chr18:28,529,537...28,535,828
Ensembl chr18:28,529,576...28,535,828 		JBrowse link
G Tlr3 toll-like receptor 3 IEP
IMP		 RGD PMID:20937230, PMID:15920723 RGD:5128701, RGD:2301737 NCBI chr16:50,016,466...50,031,011
Ensembl chr16:50,016,857...50,031,214 		JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 ISO (MGI:4868308|PMID:21102435) RGD PMID:21102435 MGI:4868308 NCBI chr 4:66,012,111...66,062,160
Ensembl chr 4:66,011,915...66,062,089 		JBrowse link
G Zcchc3 zinc finger CCHC-type containing 3 ISO (PMID:30193849)
(MGI:6271678|PMID:30193849)		 RGD PMID:30193849 MGI:6271678 NCBI chr 3:147,877,321...147,881,434
Ensembl chr 3:147,878,936...147,880,138 		JBrowse link
regulation of eIF2 alpha phosphorylation by dsRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Npm1 nucleophosmin 1 ISO
ISS		 (PMID:12882984)
GO_REF:0000024		 RGD
UniProt		 PMID:12882984 GO_REF:0000024 NCBI chr10:18,080,949...18,091,062
Ensembl chr10:18,080,950...18,090,950 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20045
    response to stimulus 10557
      cellular response to stimulus 8896
        cellular response to chemical stimulus 3513
          cellular response to nitrogen compound 922
            cellular response to dsRNA 28
              cellular response to exogenous dsRNA 19
              regulation of eIF2 alpha phosphorylation by dsRNA 1
Path 2
Term Annotations click to browse term
  biological_process 20045
    response to stimulus 10557
      response to chemical 6329
        response to organic substance 3874
          response to organic cyclic compound 1456
            response to dsRNA 60
              cellular response to dsRNA 28
                cellular response to exogenous dsRNA 19
                regulation of eIF2 alpha phosphorylation by dsRNA 1
paths to the root