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ONTOLOGY REPORT - ANNOTATIONS

Term:cellular response to type II interferon
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Accession:GO:0071346 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon gamma is the only member of the type II interferon found so far.
Synonyms:exact_synonym: cellular response to immune interferon;   cellular response to type II IFN
 related_synonym: cellular response to gamma-interferon


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cellular response to type II interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOD1 aconitate decarboxylase 1 involved_in ISO (MGI:5489057|PMID:19014335) UniProt PMID:19014335 MGI:5489057 NCBI chr11:49,077,152...49,088,218
Ensembl chr11:49,077,492...49,087,104 		JBrowse link
G ACTG1 actin gamma 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr12:1,320,355...1,323,219
Ensembl chr12:1,313,641...1,323,217 		JBrowse link
G ACTR2 actin related protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr 3:76,691,275...76,729,269
Ensembl chr 3:76,691,280...76,729,252 		JBrowse link
G ACTR3 actin related protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr15:20,104,808...20,171,721
Ensembl chr15:20,104,812...20,167,421 		JBrowse link
G ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ISO RGD PMID:18433458 RGD:2315954 NCBI chr 1:273,022,014...273,066,916
Ensembl chr 1:273,024,009...273,056,039 		JBrowse link
G AIF1 allograft inflammatory factor 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:23,711,752...23,731,191
Ensembl chr 7:23,726,787...23,731,671 		JBrowse link
G AQP4 aquaporin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:111,407,632...111,422,169
Ensembl chr 6:111,407,639...111,422,109 		JBrowse link
G ARG2 arginase 2 ISO RGD PMID:11250887 RGD:4144048 NCBI chr 7:91,343,987...91,385,911
Ensembl chr 7:91,343,988...91,385,909 		JBrowse link
G ASL argininosuccinate lyase ISO with TNFalpha RGD PMID:11072090 RGD:4139899 NCBI chr 3:16,637,481...16,646,869
Ensembl chr 3:16,637,481...16,646,867 		JBrowse link
G ASS1 argininosuccinate synthase 1 ISO with TNFalpha RGD PMID:11072090 PMID:12589771 RGD:1599307 RGD:4139899 NCBI chr 1:270,531,434...270,586,364
Ensembl chr 1:270,531,589...270,586,364 		JBrowse link
G CALM1 calmodulin 1 involved_in ISO (PMID:11972023) UniProt PMID:11972023 NCBI chr 7:112,160,823...112,171,754
Ensembl chr 7:112,160,806...112,171,744 		JBrowse link
G CALM2 calmodulin 2 involved_in ISO (PMID:11972023) UniProt PMID:11972023 NCBI chr 3:93,371,765...93,386,378
Ensembl chr 3:93,372,045...93,386,218 		JBrowse link
G CALM3 calmodulin 3 involved_in ISO (PMID:11972023) UniProt PMID:11972023 NCBI chr 6:52,506,979...52,516,704
Ensembl chr 6:52,506,674...52,516,703 		JBrowse link
G CAMK2A calcium/calmodulin dependent protein kinase II alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:151,248,356...151,353,907
Ensembl chr 2:151,248,358...151,308,706 		JBrowse link
G CAPG capping actin protein, gelsolin like acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 3:59,335,483...59,366,855
Ensembl chr 3:59,339,966...59,366,846 		JBrowse link
G CASP1 caspase 1, apoptosis-related cysteine peptidase involved_in ISO (PMID:11536016) UniProt PMID:11536016 NCBI chr 9:35,188,066...35,199,364
Ensembl chr 9:35,186,420...35,200,328 		JBrowse link
G CCL1 C-C motif chemokine ligand 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:40,728,014...40,731,411
Ensembl chr12:40,728,014...40,731,411 		JBrowse link
G CCL17 C-C motif chemokine ligand 17 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:19,345,929...19,372,972
Ensembl chr 6:19,345,941...19,348,926 		JBrowse link
G CCL2 chemokine (C-C motif) ligand 2 involved_in ISO
IBA
IEA		 RGD
GO_Central
Ensembl		 PMID:14512159 GO_REF:0000033 GO_REF:0000107 RGD:8548859 NCBI chr12:40,798,109...40,800,013
Ensembl chr12:40,798,109...40,800,026 		JBrowse link
G CCL21 C-C motif chemokine ligand 21 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:32,093,783...32,094,482
Ensembl chr10:32,093,763...32,096,224 		JBrowse link
G CCL22 C-C motif chemokine ligand 22 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:19,296,726...19,301,506
Ensembl chr 6:19,296,637...19,302,737 		JBrowse link
G CCL24 C-C motif chemokine ligand 24 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:10,347,397...10,361,500 JBrowse link
G CCL25 C-C motif chemokine ligand 25 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:71,175,066...71,206,950
Ensembl chr 2:71,175,075...71,206,950 		JBrowse link
G CCL26 C-C motif chemokine ligand 26 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:10,381,306...10,385,677
Ensembl chr 3:10,381,306...10,385,677 		JBrowse link
G CCL3L1 chemokine (C-C motif) ligand 3-like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:39,491,999...39,493,345
Ensembl chr12:39,491,914...39,493,774 		JBrowse link
G CCL4 C-C motif chemokine ligand 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:39,479,190...39,480,511
Ensembl chr12:39,478,882...39,481,082 		JBrowse link
G CCL5 C-C motif chemokine ligand 5 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr12:39,652,731...39,659,121
Ensembl chr12:39,648,598...39,659,118 		JBrowse link
G CCL8 chemokine (C-C motif) ligand 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:40,740,468...40,741,970
Ensembl chr12:40,740,023...40,742,022 		JBrowse link
G CD47 CD47 molecule involved_in ISO PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chr13:151,427,933...151,488,064
Ensembl chr13:151,429,288...151,488,544 		JBrowse link
G CD58 CD58 molecule involved_in ISO (PMID:19109405) UniProt PMID:19109405 NCBI chr 4:104,170,827...104,225,029
Ensembl chr 4:104,169,883...104,227,917 		JBrowse link
G CDC42 cell division cycle 42 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr 6:80,035,034...80,089,243
Ensembl chr 6:80,035,123...80,089,233 		JBrowse link
G CDC42EP2 CDC42 effector protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr 2:6,897,497...6,904,040
Ensembl chr 2:6,895,847...6,904,040 		JBrowse link
G CDC42EP4 CDC42 effector protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr12:7,637,797...7,660,189
Ensembl chr12:7,638,085...7,660,186 		JBrowse link
G CFH complement factor H ISO RGD PMID:12121434 RGD:632369
G CIITA class II major histocompatibility complex transactivator ISO RGD PMID:11071855 RGD:632488 NCBI chr 3:32,171,706...32,230,775
Ensembl chr 3:32,172,214...32,230,780 		JBrowse link
G CLDN1 claudin 1 ISO RGD PMID:18768927 RGD:11344890 NCBI chr13:127,714,857...127,730,628
Ensembl chr13:127,712,777...127,730,657 		JBrowse link
G CRIPTO cripto, EGF-CFC family member involved_in ISO (PMID:17720976) UniProt PMID:17720976 NCBI chr13:29,537,874...29,544,686
Ensembl chr13:29,540,314...29,543,893 		JBrowse link
G DAPK1 death associated protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:27,724,644...27,954,708
Ensembl chr10:27,724,648...27,954,350 		JBrowse link
G DAPK3 death associated protein kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:74,758,962...74,776,355
Ensembl chr 2:74,759,004...74,775,330 		JBrowse link
G DAXX death domain associated protein ISO RGD PMID:21572393 RGD:9587767 NCBI chr 7:29,676,854...29,681,145
Ensembl chr 7:29,676,856...29,681,110 		JBrowse link
G EDN1 endothelin 1 ISO RGD PMID:22301113 RGD:8662301 NCBI chr 7:8,752,018...8,758,354
Ensembl chr 7:8,751,695...8,758,348 		JBrowse link
G EPRS1 glutamyl-prolyl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:9,579,301...9,648,416
Ensembl chr10:9,579,304...9,648,414 		JBrowse link
G EVL Enah/Vasp-like acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 7:120,911,814...121,056,556
Ensembl chr 7:120,911,648...121,056,555 		JBrowse link
G FAS Fas cell surface death receptor ISO RGD PMID:10029626 RGD:14700709 NCBI chr14:100,927,305...100,954,781
Ensembl chr14:100,927,089...100,956,716 		JBrowse link
G FASLG Fas ligand ISO RGD PMID:10029626 RGD:14700709 NCBI chr 9:115,068,314...115,075,147
Ensembl chr 9:115,068,090...115,076,464 		JBrowse link
G FCAR Fc alpha receptor involved_in ISO (PMID:25339672) CAFA PMID:25339672 NCBI chr 6:59,074,979...59,084,798
Ensembl chr 6:59,074,996...59,084,788 		JBrowse link
G FLNB filamin B acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr13:39,789,259...39,938,751
Ensembl chr13:39,789,739...39,938,746 		JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:64,129,678...64,135,194
Ensembl chr 5:64,129,679...64,133,991 		JBrowse link
G GBP1 guanylate binding protein 1, interferon-inducible involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18025219) Ensembl
MGI		 PMID:18025219 GO_REF:0000107 NCBI chr 4:127,425,699...127,442,132
Ensembl chr 4:127,425,200...127,442,127 		JBrowse link
G GBP2 guanylate binding protein 2, interferon-inducible involved_in
acts_upstream_of_or_within		 IBA
ISO		 (PMID:18025219) GO_Central
MGI		 PMID:18025219 GO_REF:0000033 NCBI chr 4:127,387,222...127,408,729
Ensembl chr 4:127,379,740...127,408,699 		JBrowse link
G GSN gelsolin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr 1:261,295,711...261,372,848
Ensembl chr 1:261,307,008...261,372,848 		JBrowse link
G ICAM1 intercellular adhesion molecule 1 ISO RGD PMID:7865494 RGD:11520781 NCBI chr 2:69,097,136...69,107,722
Ensembl chr 2:69,097,122...69,108,205 		JBrowse link
G IL12B interleukin 12B acts_upstream_of_or_within ISO (PMID:18025219) MGI PMID:18025219 NCBI chr16:64,143,268...64,158,929
Ensembl chr16:64,143,268...64,158,929 		JBrowse link
G IL12RB1 interleukin 12 receptor subunit beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:59,707,958...59,736,282
Ensembl chr 2:59,707,961...59,736,282 		JBrowse link
G IL18 interleukin 18 ISO RGD PMID:18547159 RGD:4889457 NCBI chr 9:39,839,959...39,861,258
Ensembl chr 9:39,834,973...39,861,219 		JBrowse link
G IRF1 interferon regulatory factor 1 ISO RGD PMID:21261980 RGD:5128727 NCBI chr 2:134,776,122...134,783,646
Ensembl chr 2:134,776,129...134,783,801 		JBrowse link
G IRF8 interferon regulatory factor 8 involved_in IEA
ISO		 Ensembl
RGD		 PMID:21261980 GO_REF:0000107 RGD:5128727 NCBI chr 6:3,041,617...3,060,685
Ensembl chr 6:3,041,645...3,097,406 		JBrowse link
G KIF16B kinesin family member 16B acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr17:24,882,139...25,188,990
Ensembl chr17:24,882,142...25,186,703 		JBrowse link
G KIF5B kinesin family member 5B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr10:42,637,105...42,693,551
Ensembl chr10:42,637,109...42,693,491 		JBrowse link
G LGALS9 galectin 9 involved_in ISO (PMID:23817958) UniProt PMID:23817958 NCBI chr12:44,155,079...44,173,634 JBrowse link
G LOC100155195 guanylate-binding protein 7 acts_upstream_of_or_within ISO (PMID:18025219) MGI PMID:18025219 NCBI chr 4:127,356,794...127,376,858 JBrowse link
G LOC100516039 C-C motif chemokine 23 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:39,591,521...39,595,639 JBrowse link
G LOC100523310 guanylate-binding protein 6 acts_upstream_of_or_within ISO (PMID:18025219) MGI PMID:18025219 NCBI chr 4:127,177,337...127,201,984 JBrowse link
G LOC100523492 guanylate-binding protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:127,289,938...127,303,065
Ensembl chr 4:127,289,956...127,303,011 		JBrowse link
G LOC100523668 guanylate-binding protein 2-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:127,290,026...127,345,677 JBrowse link
G LOC102161784 guanylate-binding protein 6-like involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:127,222,665...127,261,718 JBrowse link
G MRC1 mannose receptor C-type 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22832163) Ensembl
MGI		 PMID:22832163 GO_REF:0000107 NCBI chr10:44,107,926...44,226,734
Ensembl chr10:44,107,072...44,226,733 		JBrowse link
G MST1 macrophage stimulating 1 ISO RGD PMID:21572393 RGD:9587767 NCBI chr13:32,214,934...32,220,045
Ensembl chr13:32,214,937...32,219,902 		JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:7524476 RGD:10059620 NCBI chr 4:12,455,141...12,460,360
Ensembl chr 4:12,455,122...12,461,078 		JBrowse link
G MYO1C myosin IC involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr12:47,691,252...47,715,670
Ensembl chr12:47,691,256...47,718,337 		JBrowse link
G NOS2 nitric oxide synthase 2 acts_upstream_of_or_within ISO (PMID:18025219) MGI PMID:18025219 NCBI chr12:44,174,944...44,219,875
Ensembl chr12:44,174,948...44,218,146 		JBrowse link
G PDE12 phosphodiesterase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:39,395,517...39,402,653
Ensembl chr13:39,395,541...39,402,650 		JBrowse link
G PECAM1 platelet and endothelial cell adhesion molecule 1 ISO RGD PMID:18466611 RGD:2311658 NCBI chr12:14,667,643...14,723,296
Ensembl chr12:14,649,044...14,723,293 		JBrowse link
G PIM1 Pim-1 proto-oncogene, serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:32,788,246...32,793,882
Ensembl chr 7:32,788,291...32,793,878 		JBrowse link
G PRPF38B pre-mRNA processing factor 38B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:111,338,988...111,347,505
Ensembl chr 4:111,233,281...111,347,501 		JBrowse link
G RAB11FIP5 RAB11 family interacting protein 5 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 3:69,656,660...69,699,542
Ensembl chr 3:69,657,696...69,699,541 		JBrowse link
G RAB12 RAB12, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 6:99,216,225...99,244,627
Ensembl chr 6:99,216,228...99,244,868 		JBrowse link
G RAB20 RAB20, member RAS oncogene family involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr11:77,167,052...77,188,893
Ensembl chr11:77,167,059...77,188,898 		JBrowse link
G RAB43 RAB43, member RAS oncogene family involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr13:71,564,250...71,596,318
Ensembl chr13:71,562,350...71,596,249 		JBrowse link
G RAB7B RAB7B, member RAS oncogene family involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr 9:66,635,636...66,666,034
Ensembl chr 9:66,635,638...66,666,036 		JBrowse link
G RPL13A ribosomal protein L13a involved_in ISO (PMID:15479637)
(MGI:5466658|PMID:23071094)		 UniProt PMID:15479637 PMID:23071094 MGI:5466658 NCBI chr 6:54,551,772...54,568,752
Ensembl chr 6:54,551,533...54,561,489 		JBrowse link
G RPS6KB1 ribosomal protein S6 kinase B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:36,111,584...36,159,287
Ensembl chr12:36,111,653...36,160,376 		JBrowse link
G SERPINA3-2 alpha-1-antichymotrypsin 2 ISO RGD PMID:7619083 RGD:5147424 NCBI chr 7:115,978,453...115,987,392
Ensembl chr 7:115,976,397...115,987,453 		JBrowse link
G SIRPA signal regulatory protein alpha involved_in ISO PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chr17:33,566,270...33,611,375 JBrowse link
G SLA-DQB1 SLA-DQ beta1 domain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:24,969,034...24,977,238
Ensembl chr 7:24,963,208...24,977,386 		JBrowse link
G SLC26A6 solute carrier family 26 member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:31,319,287...31,330,649
Ensembl chr13:31,317,877...31,330,580 		JBrowse link
G SLK STE20 like kinase ISO RGD PMID:21572393 RGD:9587767 NCBI chr14:114,898,963...114,957,494
Ensembl chr14:114,899,147...114,955,070 		JBrowse link
G SOCS1 suppressor of cytokine signaling 1 ISO RGD PMID:10707961 RGD:151232287 NCBI chr 3:31,879,143...31,883,041
Ensembl chr 3:31,881,225...31,884,967 		JBrowse link
G SOCS3 suppressor of cytokine signaling 3 ISO RGD PMID:10707961 RGD:151232287 NCBI chr12:3,643,832...3,647,015
Ensembl chr12:3,643,929...3,647,009 		JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:9564825 RGD:4891971 NCBI chr15:48,377,597...48,385,398
Ensembl chr15:48,377,521...48,385,462 		JBrowse link
G STAT1 signal transducer and activator of transcription 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:95,593,201...95,646,324
Ensembl chr15:95,593,211...95,646,260 		JBrowse link
G STX11 syntaxin 11 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 1:21,127,871...21,170,321
Ensembl chr 1:21,127,564...21,159,694 		JBrowse link
G STX4 syntaxin 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr 3:17,422,266...17,431,377
Ensembl chr 3:17,416,842...17,431,053 		JBrowse link
G STX8 syntaxin 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr12:54,296,988...54,544,668
Ensembl chr12:54,296,995...54,544,646 		JBrowse link
G STXBP1 syntaxin binding protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr 1:268,116,124...268,205,805
Ensembl chr 1:268,116,120...268,205,778 		JBrowse link
G STXBP2 syntaxin binding protein 2 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 2:71,504,575...71,513,446
Ensembl chr 2:71,504,569...71,513,422 		JBrowse link
G STXBP3 syntaxin binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr 4:111,234,154...111,294,067
Ensembl chr 4:111,233,991...111,293,964 		JBrowse link
G STXBP4 syntaxin binding protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr12:31,277,116...31,478,828
Ensembl chr12:31,277,487...31,472,792 		JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:54,563,112...54,598,408
Ensembl chr 1:54,563,114...54,598,407 		JBrowse link
G TLR2 toll like receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:75,416,257...75,428,370
Ensembl chr 8:75,411,993...75,428,330 		JBrowse link
G TLR3 toll like receptor 3 NOT ISO thyrocytes
intestinal epithelial cells		 RGD PMID:15661832 PMID:16638093 RGD:5128794 RGD:5128798 NCBI chr15:46,966,262...46,977,774
Ensembl chr15:46,969,006...46,979,291 		JBrowse link
G TLR4 toll like receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:258,044,610...258,054,641
Ensembl chr 1:258,044,610...258,058,970 		JBrowse link
G TNF tumor necrosis factor involved_in ISO
IEA		 RGD
Ensembl		 PMID:16525716 GO_REF:0000107 RGD:14985246 NCBI chr 7:23,699,635...23,702,393
Ensembl chr 7:23,699,628...23,702,416 		JBrowse link
G VAMP3 vesicle associated membrane protein 3 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 6:68,473,921...68,482,438 JBrowse link
G VAMP4 vesicle associated membrane protein 4 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 9:114,138,350...114,174,996
Ensembl chr 9:114,138,330...114,174,979 		JBrowse link
G VAMP8 vesicle associated membrane protein 8 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 3:59,187,900...59,193,165
Ensembl chr 3:59,185,735...59,193,128 		JBrowse link
G VIM vimentin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr10:43,516,441...43,526,172
Ensembl chr10:43,517,307...43,526,170 		JBrowse link
G VPS26B VPS26, retromer complex component B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr 9:60,786,192...60,802,507
Ensembl chr 9:60,785,998...60,805,193 		JBrowse link
G WAS WASP actin nucleation promoting factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr  X:42,774,597...42,793,055
Ensembl chr  X:42,774,588...42,793,055 		JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:37,344,684...37,367,215
Ensembl chr13:37,344,699...37,367,207 		JBrowse link
G XCL1 chemokine (C motif) ligand 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:82,432,845...82,436,150
Ensembl chr 4:82,432,204...82,436,180 		JBrowse link
G ZYX zyxin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chr18:6,861,072...6,870,256
Ensembl chr18:6,861,077...6,870,265 		JBrowse link
negative regulation of type II interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARG1 arginase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:32,006,035...32,028,983
Ensembl chr 1:32,006,046...32,028,988 		JBrowse link
G DNAJA3 DnaJ heat shock protein family (Hsp40) member A3 involved_in ISO (PMID:11679576) UniProt PMID:11679576 NCBI chr 3:37,883,233...37,919,141
Ensembl chr 3:37,883,244...37,919,324 		JBrowse link
G OTOP1 otopetrin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:6,127,837...6,164,421
Ensembl chr 8:6,127,965...6,163,061 		JBrowse link
G PARP14 poly(ADP-ribose) polymerase family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:137,809,499...137,865,383
Ensembl chr13:137,809,510...137,865,106 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma involved_in ISO (PMID:21268089) BHF-UCL PMID:21268089 NCBI chr13:68,301,566...68,433,951
Ensembl chr13:68,302,322...68,433,944 		JBrowse link
G PTPN2 protein tyrosine phosphatase non-receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:96,769,862...96,847,136
Ensembl chr 6:96,770,253...96,847,125 		JBrowse link
positive regulation of type II interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HPX hemopexin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18641331) Ensembl
MGI		 PMID:18641331 GO_REF:0000107 NCBI chr 9:3,288,288...3,297,051
Ensembl chr 9:3,288,172...3,297,047 		JBrowse link
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18339625) Ensembl
MGI		 PMID:18339625 GO_REF:0000107 NCBI chr12:22,830,405...22,872,420
Ensembl chr12:22,841,205...22,872,409 		JBrowse link
G NLRC5 NLR family CARD domain containing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:18,933,179...19,036,288
Ensembl chr 6:18,937,677...19,036,820 		JBrowse link
G PARP9 poly(ADP-ribose) polymerase family member 9 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr13:137,960,987...138,000,862
Ensembl chr13:137,966,562...138,000,846 		JBrowse link
G TXK TXK tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:37,977,222...38,047,876
Ensembl chr 8:37,977,986...38,046,933 		JBrowse link
regulation of type II interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDC37 cell division cycle 37, HSP90 cochaperone acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16280321) MGI
Ensembl		 PMID:16280321 GO_REF:0000107 NCBI chr 2:69,202,695...69,212,909
Ensembl chr 2:69,201,579...69,225,994 		JBrowse link
type II interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HPX hemopexin involved_in
acts_upstream_of		 IEA
ISO		 (PMID:18641331) Ensembl
MGI		 PMID:18641331 GO_REF:0000107 NCBI chr 9:3,288,288...3,297,051
Ensembl chr 9:3,288,172...3,297,047 		JBrowse link
G IFNG interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,477,906...32,482,670
Ensembl chr 5:32,477,906...32,482,670 		JBrowse link
G IFNGR1 interferon gamma receptor 1 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr 1:27,037,151...27,061,095
Ensembl chr 1:27,037,165...27,061,093 		JBrowse link
G IFNGR2 interferon gamma receptor 2 involved_in IEA GOC GO_REF:0000108 NCBI chr13:197,007,303...197,035,604
Ensembl chr13:197,007,303...197,035,604 		JBrowse link
G IRF1 interferon regulatory factor 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:134,776,122...134,783,646
Ensembl chr 2:134,776,129...134,783,801 		JBrowse link
G JAK1 Janus kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:147,320,288...147,567,188
Ensembl chr 6:147,429,056...147,567,182 		JBrowse link
G JAK2 Janus kinase 2 involved_in ISO PMID:11536325 BHF-UCL PMID:11536325 RGD:8553830 NCBI chr 1:216,849,744...217,002,310
Ensembl chr 1:216,848,689...217,002,148 		JBrowse link
G STAT1 signal transducer and activator of transcription 1 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:95,593,201...95,646,324
Ensembl chr15:95,593,211...95,646,260 		JBrowse link
G TP53 tumor protein p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:52,939,643...52,953,786
Ensembl chr12:52,939,644...52,953,818 		JBrowse link
G TYK2 tyrosine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:69,157,774...69,183,555
Ensembl chr 2:69,157,811...69,183,456 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17813
    response to stimulus 10058
      immune response 1609
        innate immune response 845
          response to type II interferon 160
            cellular response to type II interferon 131
              type II interferon-mediated signaling pathway + 21
Path 2
Term Annotations click to browse term
  biological_process 17813
    response to stimulus 10058
      response to biotic stimulus 1710
        response to external biotic stimulus 1669
          response to other organism 1665
            defense response to other organism 1147
              defense response to symbiont 1031
                innate immune response 845
                  response to type II interferon 160
                    cellular response to type II interferon 131
                      type II interferon-mediated signaling pathway + 21
paths to the root