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ONTOLOGY REPORT - ANNOTATIONS


Term:skeletal muscle acetylcholine-gated channel clustering
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Accession:GO:0071340 term browser browse the term
Definition:The accumulation of acetylcholine-gated cation channels in a narrow, central region of muscle fibers, in apposition to nerve terminals.
Synonyms:exact_synonym: skeletal muscle AChR clustering;   skeletal muscle nicotinic acetylcholine receptor clustering


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skeletal muscle acetylcholine-gated channel clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin involved_in IDA
IMP
PMID:18957220
PMID:22302937
UniProt PMID:18957220 PMID:22302937 RGD:10047261, RGD:8553690 NCBI chr 5:166,749,306...166,782,212
Ensembl chr 5:166,749,310...166,786,003
JBrowse link
G Colq collagen like tail subunit of asymmetric acetylcholinesterase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857733 (MGI:4431306|PMID:20053883)
Ensembl
RGD
PMID:20053883 GO_REF:0000107 MGI:4431306 NCBI chr16:6,731,850...6,824,973
Ensembl chr16:6,731,858...6,787,107
JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 involved_in ISO (MGI:3835221|PMID:19038220) RGD PMID:19038220 MGI:3835221 NCBI chr10:10,855,510...10,880,175
Ensembl chr10:10,854,732...10,880,161
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within ISO MGI:2137230 (MGI:3821410|PMID:19020093) RGD PMID:19020093 MGI:3821410 NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664
JBrowse link
G Etv5 ETS variant transcription factor 5 acts_upstream_of_or_within ISO MGI:3589421 (MGI:3762055|PMID:17785180) RGD PMID:17785180 MGI:3762055 NCBI chr11:78,608,618...78,666,221
Ensembl chr11:78,608,710...78,666,215
JBrowse link
G Fnta farnesyltransferase, CAAX box, alpha involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr16:66,065,131...66,083,460
Ensembl chr16:66,065,132...66,083,460
JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:5295488|PMID:22038977), (MGI:5439235|PMID:22854782)
UniProt
RGD
PMID:22038977 PMID:22854782 GO_REF:0000024 MGI:5295488 MGI:5439235 NCBI chr 3:77,429,600...77,483,593
Ensembl chr 3:77,429,798...77,483,593
JBrowse link
G Musk muscle associated receptor tyrosine kinase involved_in ISO (MGI:2663717|PMID:11323662) RGD PMID:11323662 MGI:2663717 NCBI chr 5:73,058,427...73,169,696
Ensembl chr 5:73,058,121...73,171,932
JBrowse link
G Rer1 retention in endoplasmic reticulum sorting receptor 1 acts_upstream_of_or_within ISO MGI:4329578 (MGI:4940949|PMID:21187406) RGD PMID:21187406 MGI:4940949 NCBI chr 5:165,634,567...165,646,643
Ensembl chr 5:165,634,300...165,646,750
JBrowse link
negative regulation of skeletal muscle acetylcholine-gated channel clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd9 frizzled class receptor 9 involved_in ISS
ISO
GO_REF:0000024
(MGI:5805361|PMID:24860427)
UniProt
RGD
PMID:24860427 GO_REF:0000024 MGI:5805361 NCBI chr12:21,427,084...21,429,398
Ensembl chr12:21,427,084...21,429,398
JBrowse link
positive regulation of skeletal muscle acetylcholine-gated channel clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp4 LDL receptor related protein 4 involved_in ISO (MGI:3829843|PMID:18957220) RGD PMID:18957220 MGI:3829843 NCBI chr 3:77,429,600...77,483,593
Ensembl chr 3:77,429,798...77,483,593
JBrowse link
G Lrp5 LDL receptor related protein 5 NOT|involved_in ISO (MGI:3829843|PMID:18957220) RGD PMID:18957220 MGI:3829843 NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581
JBrowse link
G Mesd mesoderm development LRP chaperone involved_in ISS
ISO
GO_REF:0000024
(MGI:5521402|PMID:24140340)
UniProt
RGD
PMID:24140340 GO_REF:0000024 MGI:5521402 NCBI chr 1:137,866,707...137,879,999
Ensembl chr 1:137,874,242...137,879,999
JBrowse link
G Musk muscle associated receptor tyrosine kinase involved_in ISO (MGI:3829843|PMID:18957220) RGD PMID:18957220 MGI:3829843 NCBI chr 5:73,058,427...73,169,696
Ensembl chr 5:73,058,121...73,171,932
JBrowse link
G Ptn pleiotrophin IDA RGD PMID:7722643 RGD:9834945 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
JBrowse link
regulation of skeletal muscle acetylcholine-gated channel clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:1924574|MGI:700014 (MGI:5803938|PMID:26527617) RGD PMID:26527617 MGI:5803938 NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238
JBrowse link
G Fzd9 frizzled class receptor 9 involved_in ISS
ISO
GO_REF:0000024
(MGI:5805361|PMID:24860427)
UniProt
RGD
PMID:24860427 GO_REF:0000024 MGI:5805361 NCBI chr12:21,427,084...21,429,398
Ensembl chr12:21,427,084...21,429,398
JBrowse link
G Sorbs1 sorbin and SH3 domain containing 1 acts_upstream_of_or_within ISO MGI:104686|MGI:1924574 (MGI:5803938|PMID:26527617) RGD PMID:26527617 MGI:5803938 NCBI chr 1:239,107,882...239,330,276
Ensembl chr 1:239,108,777...239,330,169
JBrowse link
G Sorbs2 sorbin and SH3 domain containing 2 acts_upstream_of_or_within ISO MGI:104686|MGI:700014 (MGI:5803938|PMID:26527617) RGD PMID:26527617 MGI:5803938 NCBI chr16:46,435,220...46,748,743
Ensembl chr16:46,435,237...46,626,514
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    cellular process 18340
      cellular component organization or biogenesis 6481
        cellular component organization 6235
          membrane organization 871
            postsynaptic membrane organization 48
              skeletal muscle acetylcholine-gated channel clustering 16
                negative regulation of skeletal muscle acetylcholine-gated channel clustering 1
                positive regulation of skeletal muscle acetylcholine-gated channel clustering 5
                regulation of skeletal muscle acetylcholine-gated channel clustering + 9
Path 2
Term Annotations click to browse term
  biological_process 19492
    cellular process 18340
      cellular component organization or biogenesis 6481
        cellular component organization 6235
          cell junction organization 798
            synapse organization 512
              postsynapse organization 223
                postsynaptic membrane organization 48
                  skeletal muscle acetylcholine-gated channel clustering 16
                    negative regulation of skeletal muscle acetylcholine-gated channel clustering 1
                    positive regulation of skeletal muscle acetylcholine-gated channel clustering 5
                    regulation of skeletal muscle acetylcholine-gated channel clustering + 9
paths to the root