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ONTOLOGY REPORT - ANNOTATIONS

Term:skeletal muscle acetylcholine-gated channel clustering
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Accession:GO:0071340 term browser browse the term
Definition:The accumulation of acetylcholine-gated cation channels in a narrow, central region of muscle fibers, in apposition to nerve terminals.
Synonyms:exact_synonym: skeletal muscle AChR clustering;   skeletal muscle nicotinic acetylcholine receptor clustering


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skeletal muscle acetylcholine-gated channel clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin involved_in IDA
IMP		 PMID:18957220
PMID:22302937		 UniProt PMID:18957220 PMID:22302937 RGD:10047261, RGD:8553690 NCBI chr 5:166,749,306...166,782,212
Ensembl chr 5:166,749,310...166,786,003 		JBrowse link
G Colq collagen like tail subunit of asymmetric acetylcholinesterase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857733 (PMID:20053883)		 Ensembl
RGD		 PMID:20053883 GO_REF:0000107 NCBI chr16:6,731,850...6,824,973
Ensembl chr16:6,731,858...6,787,107 		JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 involved_in ISO (PMID:19038220) RGD PMID:19038220 NCBI chr10:10,854,732...10,880,171
Ensembl chr10:10,854,732...10,880,161 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within ISO MGI:2137230 (PMID:19020093) RGD PMID:19020093 NCBI chr 5:171,738,911...171,750,967
Ensembl chr 5:166,456,686...166,468,664 		JBrowse link
G Etv5 ETS variant transcription factor 5 acts_upstream_of_or_within ISO MGI:3589421 (PMID:17785180) RGD PMID:17785180 NCBI chr11:78,608,618...78,666,221
Ensembl chr11:78,608,710...78,666,215 		JBrowse link
G Fnta farnesyltransferase, CAAX box, subunit alpha involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr16:66,065,131...66,083,460
Ensembl chr16:66,065,132...66,083,460 		JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISS
ISO		 GO_REF:0000024
(PMID:22038977), (PMID:22854782)		 UniProt
RGD		 PMID:22038977 PMID:22854782 GO_REF:0000024 NCBI chr 3:77,429,600...77,483,593
Ensembl chr 3:77,429,798...77,483,593 		JBrowse link
G Musk muscle associated receptor tyrosine kinase involved_in ISO (PMID:11323662) RGD PMID:11323662 NCBI chr 5:73,058,427...73,169,696
Ensembl chr 5:73,058,121...73,171,932 		JBrowse link
G Rapsn receptor-associated protein of the synapse involved_in ISO (PMID:18420419) RGD PMID:18420419 NCBI chr 3:77,015,073...77,024,378
Ensembl chr 3:76,983,471...77,024,373 		JBrowse link
G Rer1 retention in endoplasmic reticulum sorting receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4329578 (PMID:21187406)		 Ensembl
RGD		 PMID:21187406 GO_REF:0000107 NCBI chr 5:165,634,567...165,646,643
Ensembl chr 5:165,634,300...165,646,750 		JBrowse link
negative regulation of skeletal muscle acetylcholine-gated channel clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzd9 frizzled class receptor 9 involved_in ISS
ISO		 GO_REF:0000024
(PMID:24860427)		 UniProt
RGD		 PMID:24860427 GO_REF:0000024 NCBI chr12:27,063,640...27,065,954
Ensembl chr12:21,427,084...21,429,398 		JBrowse link
positive regulation of skeletal muscle acetylcholine-gated channel clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin involved_in ISO MGI:103581 (PMID:14622576), (PMID:18848351), (PMID:18957220), (PMID:8653787) RGD PMID:8653787 PMID:14622576 PMID:18848351 PMID:18957220 NCBI chr 5:166,749,306...166,782,212
Ensembl chr 5:166,749,310...166,786,003 		JBrowse link
G Crk CRK proto-oncogene, adaptor protein involved_in ISO MGI:103581 (PMID:14622576), (PMID:18848351), (PMID:18957220), (PMID:8653787) RGD PMID:8653787 PMID:14622576 PMID:18848351 PMID:18957220 NCBI chr10:61,028,736...61,054,971
Ensembl chr10:60,530,464...60,553,406 		JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein involved_in ISO MGI:103581 (PMID:14622576), (PMID:18848351), (PMID:18957220), (PMID:8653787) RGD PMID:8653787 PMID:14622576 PMID:18848351 PMID:18957220 NCBI chr11:97,033,033...97,067,457
Ensembl chr11:83,526,530...83,563,238 		JBrowse link
G Dok7 docking protein 7 involved_in ISO MGI:103581 (PMID:14622576), (PMID:18848351), (PMID:18957220), (PMID:8653787) RGD PMID:8653787 PMID:14622576 PMID:18848351 PMID:18957220 NCBI chr14:75,665,444...75,699,413
Ensembl chr14:75,666,744...75,699,386 		JBrowse link
G Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 involved_in ISO MGI:104683 (PMID:14622576) RGD PMID:14622576 NCBI chr15:98,124,304...98,363,299
Ensembl chr15:98,182,329...98,363,299 		JBrowse link
G Fnta farnesyltransferase, CAAX box, subunit alpha involved_in IEA
ISO		 GO_REF:0000107
MGI:103581 (PMID:14622576), (PMID:18848351), (PMID:18957220), (PMID:8653787)		 Ensembl
RGD		 PMID:8653787 PMID:14622576 PMID:18848351 PMID:18957220 GO_REF:0000107 NCBI chr16:66,065,131...66,083,460
Ensembl chr16:66,065,132...66,083,460 		JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISO MGI:103581 (PMID:14622576), (PMID:18848351), (PMID:18957220), (PMID:8653787) RGD PMID:8653787 PMID:14622576 PMID:18848351 PMID:18957220 NCBI chr 3:77,429,600...77,483,593
Ensembl chr 3:77,429,798...77,483,593 		JBrowse link
G Lrp5 LDL receptor related protein 5 NOT|involved_in ISO (PMID:18957220) RGD PMID:18957220 NCBI chr 1:210,243,499...210,346,886
Ensembl chr 1:200,814,250...200,917,581 		JBrowse link
G Mesd mesoderm development LRP chaperone involved_in ISS
ISO		 GO_REF:0000024
(PMID:24140340)		 UniProt
RGD		 PMID:24140340 GO_REF:0000024 NCBI chr 1:137,866,707...137,879,999
Ensembl chr 1:137,874,242...137,879,999 		JBrowse link
G Musk muscle associated receptor tyrosine kinase involved_in ISO MGI:103581 (PMID:14622576), (PMID:18848351), (PMID:18957220), (PMID:8653787) RGD PMID:8653787 PMID:14622576 PMID:18848351 PMID:18957220 NCBI chr 5:73,058,427...73,169,696
Ensembl chr 5:73,058,121...73,171,932 		JBrowse link
G Ptn pleiotrophin IDA RGD PMID:7722643 RGD:9834945 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456 		JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO MGI:104683 (PMID:14622576) RGD PMID:14622576 NCBI chr12:16,150,411...16,170,864
Ensembl chr12:11,036,698...11,057,251 		JBrowse link
regulation of skeletal muscle acetylcholine-gated channel clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:1924574|MGI:700014 (PMID:26527617) RGD PMID:26527617 NCBI chr11:97,033,033...97,067,457
Ensembl chr11:83,526,530...83,563,238 		JBrowse link
G Fzd9 frizzled class receptor 9 involved_in ISS
ISO		 GO_REF:0000024
(PMID:24860427)		 UniProt
RGD		 PMID:24860427 GO_REF:0000024 NCBI chr12:27,063,640...27,065,954
Ensembl chr12:21,427,084...21,429,398 		JBrowse link
G Sorbs1 sorbin and SH3 domain containing 1 acts_upstream_of_or_within ISO MGI:104686|MGI:1924574 (PMID:26527617) RGD PMID:26527617 NCBI chr 1:249,057,324...249,279,703
Ensembl chr 1:239,108,777...239,330,169 		JBrowse link
G Sorbs2 sorbin and SH3 domain containing 2 acts_upstream_of_or_within ISO MGI:104686|MGI:700014 (PMID:26527617) RGD PMID:26527617 NCBI chr16:46,435,220...46,748,743
Ensembl chr16:46,435,237...46,626,514 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20546
    cellular process 19536
      cellular localization 3682
        localization within membrane 763
          protein localization to membrane 668
            receptor clustering 82
              skeletal muscle acetylcholine-gated channel clustering 21
                negative regulation of skeletal muscle acetylcholine-gated channel clustering 1
                positive regulation of skeletal muscle acetylcholine-gated channel clustering 12
                regulation of skeletal muscle acetylcholine-gated channel clustering + 15
Path 2
Term Annotations click to browse term
  biological_process 20546
    cellular process 19536
      cellular component organization or biogenesis 7196
        cellular component organization 6911
          cell junction organization 988
            synapse organization 708
              postsynapse organization 338
                postsynaptic membrane organization 55
                  skeletal muscle acetylcholine-gated channel clustering 21
                    negative regulation of skeletal muscle acetylcholine-gated channel clustering 1
                    positive regulation of skeletal muscle acetylcholine-gated channel clustering 12
                    regulation of skeletal muscle acetylcholine-gated channel clustering + 15
paths to the root