Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:cellular response to vitamin
go back to main search page
Accession:GO:0071295 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin stimulus.


show annotations for term's descendants           Sort by:
cellular response to vitamin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting protein C-terminal helicase 1 ISO RGD PMID:16771696 RGD:2326085 NCBI chr11:85,948,957...86,092,041
Ensembl chr11:85,948,964...86,092,019 		JBrowse link
cellular response to folic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Folr1 folate receptor alpha involved_in
acts_upstream_of_or_within		 ISO
TAS		 (MGI:1928152|PMID:11111049) MGI
GOC		 PMID:11111049 GO_REF:0000119 MGI:1928152 MGI:4834177 NCBI chr 7:101,507,551...101,519,974
Ensembl chr 7:101,507,538...101,519,995 		JBrowse link
cellular response to L-ascorbic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eln elastin ISO RGD PMID:2859894 RGD:9585689 NCBI chr 5:134,731,449...134,776,300
Ensembl chr 5:134,731,447...134,776,177 		JBrowse link
G Lep leptin ISO RGD PMID:20400526 RGD:5128594 NCBI chr 6:29,060,220...29,073,875
Ensembl chr 6:29,060,219...29,073,876 		JBrowse link
cellular response to vitamin A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ltc4s leukotriene C4 synthase ISO RGD PMID:12767051 RGD:724432 NCBI chr11:50,127,288...50,129,378
Ensembl chr11:50,127,288...50,129,443 		JBrowse link
cellular response to vitamin B1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mdm2 transformed mouse 3T3 cell double minute 2 ISO RGD PMID:15656374 RGD:2317394 NCBI chr10:117,524,780...117,546,663
Ensembl chr10:117,524,780...117,546,663 		JBrowse link
cellular response to vitamin B3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sirt1 sirtuin 1 ISO RGD PMID:23555824 RGD:10047117 NCBI chr10:63,154,784...63,174,814
Ensembl chr10:63,154,784...63,217,483 		JBrowse link
cellular response to vitamin D term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif 1 ISO RGD PMID:11108265 RGD:9681746 NCBI chr16:85,590,715...85,600,001
Ensembl chr16:85,590,715...85,600,001 		JBrowse link
G Atp2b1 ATPase, Ca++ transporting, plasma membrane 1 ISO RGD PMID:11277270 RGD:2317730 NCBI chr10:98,750,243...98,862,005
Ensembl chr10:98,750,268...98,862,005 		JBrowse link
G Bglap bone gamma carboxyglutamate protein ISO RGD PMID:3257212 PMID:6607920 RGD:2316174 RGD:6483560 NCBI chr 3:88,290,802...88,291,773
Ensembl chr 3:88,290,808...88,291,771 		JBrowse link
G Casr calcium-sensing receptor ISO 1,25-dihydroxycholecalciferol (calcitriol) RGD PMID:21940515 RGD:7205697 NCBI chr16:36,310,947...36,382,605
Ensembl chr16:36,314,058...36,382,503 		JBrowse link
G Cyp24a1 cytochrome P450, family 24, subfamily a, polypeptide 1 ISO RGD PMID:28104492 RGD:151665513 NCBI chr 2:170,324,877...170,339,065
Ensembl chr 2:170,324,628...170,339,065 		JBrowse link
G Fes feline sarcoma oncogene involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:80,027,506...80,037,702
Ensembl chr 7:80,027,504...80,037,694 		JBrowse link
G Fgf23 fibroblast growth factor 23 ISO RGD PMID:23263654 RGD:10044209 NCBI chr 6:127,049,865...127,059,257
Ensembl chr 6:127,049,865...127,058,371 		JBrowse link
G Fzd1 frizzled class receptor 1 ISO RGD PMID:1334084 RGD:61590 NCBI chr 5:4,803,839...4,808,216
Ensembl chr 5:4,803,839...4,808,035 		JBrowse link
G Fzd2 frizzled class receptor 2 ISO RGD PMID:1334084 RGD:61590 NCBI chr11:102,495,257...102,498,884
Ensembl chr11:102,495,222...102,498,884 		JBrowse link
G Gdap1 ganglioside-induced differentiation-associated-protein 1 ISO RGD PMID:25449168 RGD:12738378 NCBI chr 1:17,202,028...17,234,513
Ensembl chr 1:17,215,586...17,234,495 		JBrowse link
G Il15 interleukin 15 ISO RGD PMID:15637289 RGD:2311387 NCBI chr 8:83,058,253...83,129,883
Ensembl chr 8:83,058,261...83,129,851 		JBrowse link
G Itgb1 integrin beta 1 (fibronectin receptor beta) ISO calcitriol RGD PMID:20304064 RGD:2325261 NCBI chr 8:129,412,135...129,460,060
Ensembl chr 8:129,412,135...129,459,681 		JBrowse link
G Kdm6a lysine (K)-specific demethylase 6A involved_in ISO RGD
MGI		 PMID:31907922 GO_REF:0000096 MGI:4417868 RGD:151665135 NCBI chr  X:18,027,101...18,147,061
Ensembl chr  X:18,028,814...18,146,175 		JBrowse link
G Ltbp1 latent transforming growth factor beta binding protein 1 ISO RGD PMID:10025676 RGD:10412059 NCBI chr17:75,312,475...75,699,507
Ensembl chr17:75,312,563...75,699,507 		JBrowse link
G Mir125b-1 microRNA 125b-1 involved_in ISO (PMID:28389358) ARUK-UCL PMID:28389358 NCBI chr 9:41,493,222...41,493,298
Ensembl chr 9:41,493,222...41,493,298 		JBrowse link
G Mir125b-2 microRNA 125b-2 involved_in ISO (PMID:28389358) ARUK-UCL PMID:28389358 NCBI chr16:77,443,161...77,443,231
Ensembl chr16:77,443,161...77,443,231 		JBrowse link
G Mmp1b matrix metallopeptidase 1b (interstitial collagenase) ISO RGD PMID:22064970 RGD:7207281 NCBI chr 9:7,367,670...7,388,026
Ensembl chr 9:7,368,239...7,388,047 		JBrowse link
G Nos2 nitric oxide synthase 2, inducible ISO RGD PMID:18534083 RGD:4891908 NCBI chr11:78,811,613...78,851,052
Ensembl chr11:78,811,613...78,851,080 		JBrowse link
G Pdia3 protein disulfide isomerase associated 3 involved_in ISO RGD
MGI		 PMID:15862831 GO_REF:0000096 MGI:4417868 RGD:9999173 NCBI chr 2:121,244,383...121,269,168
Ensembl chr 2:121,244,256...121,269,168 		JBrowse link
G Penk preproenkephalin ISO RGD PMID:8584038 RGD:10003035 NCBI chr 4:4,133,536...4,138,815
Ensembl chr 4:4,133,531...4,138,819 		JBrowse link
G Phex phosphate regulating endopeptidase homolog, X-linked ISO RGD PMID:15337762 RGD:11556251 NCBI chr  X:155,945,071...156,198,282
Ensembl chr  X:155,945,071...156,198,308 		JBrowse link
G Ptn pleiotrophin ISO RGD PMID:21153232 RGD:9831436 NCBI chr 6:36,691,863...36,787,114
Ensembl chr 6:36,691,864...36,787,155 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in ISO (PMID:16149051) UniProt PMID:16149051 NCBI chr 8:23,901,401...23,939,648
Ensembl chr 8:23,901,518...23,939,648 		JBrowse link
G Sult2a1 sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 1 ISO RGD PMID:14978251 RGD:2317006 NCBI chr 7:13,530,171...13,571,335
Ensembl chr 7:13,530,171...13,571,334 		JBrowse link
G Tnc tenascin C ISO RGD PMID:10502285 RGD:4889620 NCBI chr 4:63,878,022...63,965,554
Ensembl chr 4:63,878,022...63,965,252 		JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 ISO RGD PMID:29331667 RGD:127284861 NCBI chr17:48,539,763...48,553,955
Ensembl chr17:48,539,796...48,553,952 		JBrowse link
G Vdr vitamin D (1,25-dihydroxyvitamin D3) receptor ISO RGD PMID:9753201 RGD:8158092 NCBI chr15:97,752,308...97,806,177
Ensembl chr15:97,752,306...97,808,511 		JBrowse link
cellular response to vitamin E term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col1a1 collagen, type I, alpha 1 ISO RGD PMID:23722449 RGD:8552711 NCBI chr11:94,827,050...94,843,868
Ensembl chr11:94,827,050...94,843,868 		JBrowse link
G Col2a1 collagen, type II, alpha 1 ISO RGD PMID:23722449 RGD:8552711 NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576 		JBrowse link
G Pawr PRKC, apoptosis, WT1, regulator ISO RGD PMID:10428045 RGD:9835341 NCBI chr10:108,168,050...108,250,708
Ensembl chr10:108,167,982...108,250,101 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma ISO RGD PMID:11752099 RGD:8553036 NCBI chr 6:115,337,828...115,467,365
Ensembl chr 6:115,337,912...115,467,360 		JBrowse link
cellular response to vitamin K term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl5 C-C motif chemokine ligand 5 ISO menadione (K3) RGD PMID:19291322 RGD:4889997 NCBI chr11:83,416,604...83,421,344
Ensembl chr11:83,416,604...83,421,344 		JBrowse link
G Gas6 growth arrest specific 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:13,515,374...13,544,535
Ensembl chr 8:13,515,374...13,544,490 		JBrowse link
G Postn periostin, osteoblast specific factor involved_in IDA
ISO		 (MGI:3804342|PMID:18450759) UniProt
MGI		 PMID:18450759 GO_REF:0000119 MGI:3804342 MGI:4834177 NCBI chr 3:54,266,688...54,298,462
Ensembl chr 3:54,268,530...54,298,458 		JBrowse link
negative regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kank2 KN motif and ankyrin repeat domains 2 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 9:21,678,069...21,709,842
Ensembl chr 9:21,678,080...21,710,040 		JBrowse link
G Snai2 snail family zinc finger 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:14,523,716...14,527,259
Ensembl chr16:14,523,716...14,527,249 		JBrowse link
positive regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:126,884,115...126,891,897
Ensembl chr10:126,884,119...126,888,875 		JBrowse link
G Mn1 meningioma 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:111,565,145...111,604,890
Ensembl chr 5:111,565,228...111,604,899 		JBrowse link
G Rxra retinoid X receptor alpha involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:27,566,457...27,653,331
Ensembl chr 2:27,566,452...27,652,969 		JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:87,496,680...87,519,069
Ensembl chr12:87,495,845...87,519,044 		JBrowse link
G Vdr vitamin D (1,25-dihydroxyvitamin D3) receptor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:97,752,308...97,806,177
Ensembl chr15:97,752,306...97,808,511 		JBrowse link
regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Med1 mediator complex subunit 1 acts_upstream_of_or_within IMP (PMID:16324150) MGI PMID:16324150 NCBI chr11:98,042,980...98,084,121
Ensembl chr11:98,042,980...98,084,119 		JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:87,496,680...87,519,069
Ensembl chr12:87,495,845...87,519,044 		JBrowse link
G Trim24 tripartite motif-containing 24 acts_upstream_of_or_within IMP (PMID:18287084) MGI PMID:18287084 NCBI chr 6:37,846,816...37,945,380
Ensembl chr 6:37,847,746...37,943,231 		JBrowse link
vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncoa3 nuclear receptor coactivator 3 involved_in ISO (PMID:9267036) UniProt PMID:9267036 NCBI chr 2:165,834,557...165,915,162
Ensembl chr 2:165,834,545...165,915,162 		JBrowse link
G Pim1 proviral integration site 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:29,709,759...29,715,085
Ensembl chr17:29,709,727...29,715,086 		JBrowse link
G Vdr vitamin D (1,25-dihydroxyvitamin D3) receptor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:97,752,308...97,806,177
Ensembl chr15:97,752,306...97,808,511 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28697
    response to stimulus 10828
      response to nutrient levels 830
        response to nutrient 352
          cellular response to nutrient 83
            cellular response to vitamin 51
              cellular response to L-ascorbic acid 2
              cellular response to biotin 0
              cellular response to cobalamin 0
              cellular response to folic acid 1
              cellular response to vitamin A 1
              cellular response to vitamin B1 1
              cellular response to vitamin B2 0
              cellular response to vitamin B3 1
              cellular response to vitamin B6 0
              cellular response to vitamin D + 37
              cellular response to vitamin E 4
              cellular response to vitamin K + 3
paths to the root