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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to vitamin
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Accession:GO:0071295 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin stimulus.



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cellular response to vitamin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRIP1 BRCA1 interacting helicase 1 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:16771696 GO_REF:0000107 RGD:2326085 NCBI chr17:61,679,139...61,863,528
Ensembl chr17:61,679,139...61,863,559
JBrowse link
cellular response to folic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOLR1 folate receptor alpha involved_in IDA
IEA
(PMID:14722620) BHF-UCL
BHF-UCL
GOC
PMID:14722620 GO_REF:0000108 NCBI chr11:72,189,709...72,196,323
Ensembl chr11:72,189,558...72,196,323
JBrowse link
G FOLR2 folate receptor beta involved_in IEA GOC
GOC
GO_REF:0000108 NCBI chr11:72,216,794...72,221,950
Ensembl chr11:72,216,601...72,221,950
JBrowse link
cellular response to L-ascorbic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELN elastin ISO RGD PMID:2859894 RGD:9585689 NCBI chr 7:74,028,173...74,069,907
Ensembl chr 7:74,027,789...74,069,907
JBrowse link
G LEP leptin involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:20400526 GO_REF:0000107 RGD:5128594 NCBI chr 7:128,241,278...128,257,629
Ensembl chr 7:128,241,278...128,257,629
JBrowse link
cellular response to menadione term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCPS decapping enzyme, scavenger involved_in IDA (PMID:16140270) UniProt
UniProt
PMID:16140270 NCBI chr11:126,304,060...126,350,005
Ensembl chr11:126,304,060...126,350,005
JBrowse link
G NDOR1 NADPH dependent diflavin oxidoreductase 1 involved_in IDA (PMID:16140270) UniProt
UniProt
PMID:16140270 NCBI chr 9:137,205,700...137,219,361
Ensembl chr 9:137,205,685...137,219,361
JBrowse link
cellular response to vitamin A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LTC4S leukotriene C4 synthase ISO RGD PMID:12767051 RGD:724432 NCBI chr 5:179,793,986...179,796,647
Ensembl chr 5:179,793,980...179,796,647
JBrowse link
cellular response to vitamin B1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MDM2 MDM2 proto-oncogene ISO RGD PMID:15656374 RGD:2317394 NCBI chr12:68,808,172...68,850,686
Ensembl chr12:68,808,177...68,845,544
JBrowse link
cellular response to vitamin B3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIRT1 sirtuin 1 ISO RGD PMID:23555824 RGD:10047117 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390
JBrowse link
cellular response to vitamin D term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif 1 ISO RGD PMID:11108265 RGD:9681746 NCBI chr21:26,835,755...26,845,409
Ensembl chr21:26,835,755...26,845,409
JBrowse link
G ATP2B1 ATPase plasma membrane Ca2+ transporting 1 involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:11277270 GO_REF:0000107 RGD:2317730 NCBI chr12:89,588,049...89,709,366
Ensembl chr12:89,588,049...89,709,300
JBrowse link
G BGLAP bone gamma-carboxyglutamate protein involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:3257212 PMID:6607920 GO_REF:0000107 RGD:2316174 RGD:6483560 NCBI chr 1:156,242,184...156,243,317
Ensembl chr 1:156,242,184...156,243,317
JBrowse link
G CASR calcium sensing receptor involved_in ISO
IEA
1,25-dihydroxycholecalciferol (calcitriol) RGD
Ensembl
Ensembl
PMID:21940515 GO_REF:0000107 RGD:7205697 NCBI chr 3:122,183,668...122,291,629
Ensembl chr 3:122,183,668...122,291,629
JBrowse link
G CYP24A1 cytochrome P450 family 24 subfamily A member 1 involved_in ISO
IEA
RGD
Ensembl
PMID:28104492 GO_REF:0000107 RGD:151665513 NCBI chr20:54,143,538...54,173,986
Ensembl chr20:54,153,446...54,173,986
JBrowse link
G FES FES proto-oncogene, tyrosine kinase involved_in IMP (PMID:28389358) ARUK-UCL
ARUK-UCL
PMID:28389358 NCBI chr15:90,884,504...90,895,776
Ensembl chr15:90,883,695...90,895,776
JBrowse link
G FGF23 fibroblast growth factor 23 involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:23263654 GO_REF:0000107 RGD:10044209 NCBI chr12:4,368,227...4,379,712
Ensembl chr12:4,368,227...4,379,712
JBrowse link
G FZD1 frizzled class receptor 1 ISO RGD PMID:1334084 RGD:61590 NCBI chr 7:91,264,433...91,271,326
Ensembl chr 7:91,264,433...91,271,326
JBrowse link
G FZD2 frizzled class receptor 2 ISO RGD PMID:1334084 RGD:61590 NCBI chr17:44,557,484...44,561,262
Ensembl chr17:44,557,484...44,561,262
JBrowse link
G GDAP1 ganglioside induced differentiation associated protein 1 involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:25449168 GO_REF:0000107 RGD:12738378 NCBI chr 8:74,350,403...74,488,872
Ensembl chr 8:74,320,613...74,518,007
JBrowse link
G IL15 interleukin 15 involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:15637289 GO_REF:0000107 RGD:2311387 NCBI chr 4:141,636,583...141,733,987
Ensembl chr 4:141,636,583...141,733,987
JBrowse link
G ITGB1 integrin subunit beta 1 ISO calcitriol RGD PMID:20304064 RGD:2325261 NCBI chr10:32,900,318...32,958,230
Ensembl chr10:32,887,273...33,005,792
JBrowse link
G KDM6A lysine demethylase 6A ISO RGD PMID:31907922 RGD:151665135 NCBI chr  X:44,873,188...45,112,779
Ensembl chr  X:44,873,188...45,112,779
JBrowse link
G LTBP1 latent transforming growth factor beta binding protein 1 ISO RGD PMID:10025676 RGD:10412059 NCBI chr 2:32,946,953...33,399,509
Ensembl chr 2:32,946,953...33,399,509
JBrowse link
G MIR125B1 microRNA 125b-1 involved_in IDA (PMID:28389358) ARUK-UCL PMID:28389358 NCBI chr11:122,099,757...122,099,844
Ensembl chr11:122,099,757...122,099,844
JBrowse link
G MIR125B2 microRNA 125b-2 involved_in IDA (PMID:28389358) ARUK-UCL PMID:28389358 NCBI chr21:16,590,237...16,590,325
Ensembl chr21:16,590,237...16,590,325
JBrowse link
G MMP1 matrix metallopeptidase 1 ISO RGD PMID:22064970 RGD:7207281 NCBI chr11:102,789,919...102,798,160
Ensembl chr11:102,789,401...102,798,160
JBrowse link
G NOS2 nitric oxide synthase 2 ISO RGD PMID:18534083 RGD:4891908 NCBI chr17:27,756,766...27,800,529
Ensembl chr17:27,756,766...27,800,529
JBrowse link
G PDIA3 protein disulfide isomerase family A member 3 ISO RGD PMID:15862831 RGD:9999173 NCBI chr15:43,746,438...43,773,278
Ensembl chr15:43,746,394...43,773,279
JBrowse link
G PENK proenkephalin involved_in ISO
IEA
RGD
Ensembl
Ensembl
PMID:8584038 GO_REF:0000107 RGD:10003035 NCBI chr 8:56,440,957...56,446,641
Ensembl chr 8:56,436,674...56,446,671
JBrowse link
G PHEX phosphate regulating endopeptidase X-linked involved_in IEA
ISO
Ensembl
Ensembl
RGD
PMID:15337762 GO_REF:0000107 RGD:11556251 NCBI chr  X:22,032,325...22,251,310
Ensembl chr  X:22,032,325...22,494,713
JBrowse link
G PTN pleiotrophin ISO RGD PMID:21153232 RGD:9831436 NCBI chr 7:137,227,341...137,343,733
Ensembl chr 7:137,227,341...137,343,774
JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in IEP (PMID:16149051) UniProt
UniProt
PMID:16149051 NCBI chr 8:41,261,962...41,309,473
Ensembl chr 8:41,261,962...41,309,473
JBrowse link
G SULT2A1 sulfotransferase family 2A member 1 ISO RGD PMID:14978251 RGD:2317006 NCBI chr19:47,870,467...47,886,315
Ensembl chr19:47,870,467...47,886,315
JBrowse link
G TNC tenascin C ISO RGD PMID:10502285 RGD:4889620 NCBI chr 9:115,019,575...115,118,157
Ensembl chr 9:115,019,575...115,118,257
JBrowse link
G TREM1 triggering receptor expressed on myeloid cells 1 ISO RGD PMID:29331667 RGD:127284861 NCBI chr 6:41,267,385...41,286,682
Ensembl chr 6:41,267,926...41,286,682
JBrowse link
G VDR vitamin D receptor ISO RGD PMID:9753201 RGD:8158092 NCBI chr12:47,841,537...47,904,994
Ensembl chr12:47,841,537...47,943,048
JBrowse link
cellular response to vitamin E term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL1A1 collagen type I alpha 1 chain involved_in IEA
ISO
Ensembl
RGD
Ensembl
PMID:23722449 GO_REF:0000107 RGD:8552711 NCBI chr17:50,184,101...50,201,631
Ensembl chr17:50,184,101...50,201,632
JBrowse link
G COL2A1 collagen type II alpha 1 chain ISO RGD PMID:23722449 RGD:8552711 NCBI chr12:47,972,967...48,006,212
Ensembl chr12:47,972,967...48,004,554
JBrowse link
G PAWR pro-apoptotic WT1 regulator ISO RGD PMID:10428045 RGD:9835341 NCBI chr12:79,584,879...79,690,964
Ensembl chr12:79,574,979...79,690,964
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma involved_in IEA
ISO
Ensembl
RGD
Ensembl
PMID:11752099 GO_REF:0000107 RGD:8553036 NCBI chr 3:12,287,368...12,434,344
Ensembl chr 3:12,287,368...12,434,356
JBrowse link
cellular response to vitamin K term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL5 C-C motif chemokine ligand 5 ISO menadione (K3) RGD PMID:19291322 RGD:4889997 NCBI chr17:35,871,491...35,880,360
Ensembl chr17:35,871,491...35,880,793
JBrowse link
G GAS6 growth arrest specific 6 involved_in IDA (PMID:16359517) UniProt
UniProt
PMID:16359517 NCBI chr13:113,820,549...113,864,076
Ensembl chr13:113,820,549...113,864,076
JBrowse link
G POSTN periostin involved_in IDA
IEA
(PMID:18450759) UniProt
Ensembl
UniProt
PMID:18450759 GO_REF:0000107 NCBI chr13:37,562,585...37,598,768
Ensembl chr13:37,562,583...37,598,844
JBrowse link
negative regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KANK2 KN motif and ankyrin repeat domains 2 involved_in IMP
IBA
(PMID:24671081)
(PMID:21873635)
UniProt
UniProt
GO_Central
GO_Central
PMID:21873635 PMID:24671081 NCBI chr19:11,164,270...11,197,865
Ensembl chr19:11,164,270...11,197,791
JBrowse link
G SNAI2 snail family transcriptional repressor 2 involved_in IDA (PMID:19502595) BHF-UCL
BHF-UCL
PMID:19502595 NCBI chr 8:48,917,598...48,921,429
Ensembl chr 8:48,917,598...48,921,740
JBrowse link
positive regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP27B1 cytochrome P450 family 27 subfamily B member 1 involved_in IDA (PMID:16549446) BHF-UCL
BHF-UCL
PMID:16549446 NCBI chr12:57,762,334...57,767,078
Ensembl chr12:57,762,334...57,768,986
JBrowse link
G MN1 MN1 proto-oncogene, transcriptional regulator involved_in IDA (PMID:15890672) UniProt
UniProt
PMID:15890672 NCBI chr22:27,748,277...27,801,756
Ensembl chr22:27,748,277...27,801,756
JBrowse link
G RXRA retinoid X receptor alpha involved_in IDA (PMID:20171278) ComplexPortal
ComplexPortal
PMID:20171278 NCBI chr 9:134,326,455...134,440,585
Ensembl chr 9:134,317,098...134,440,585
JBrowse link
G RXRB retinoid X receptor beta involved_in IC ComplexPortal GO_REF:0000114 NCBI chr 6:33,193,588...33,200,853
Ensembl chr 6:33,193,588...33,200,665
JBrowse link
G SNW1 SNW domain containing 1 involved_in IDA (PMID:11514567), (PMID:9632709) UniProt
UniProt
PMID:9632709 PMID:11514567 NCBI chr14:77,717,599...77,761,156
Ensembl chr14:77,717,599...77,761,207
JBrowse link
G VDR vitamin D receptor involved_in IDA
IC
(PMID:20171278) ComplexPortal
ComplexPortal
PMID:20171278 GO_REF:0000114 NCBI chr12:47,841,537...47,904,994
Ensembl chr12:47,841,537...47,943,048
JBrowse link
regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3655015|PMID:16324150) Ensembl
Ensembl
MGI
PMID:16324150 GO_REF:0000107 MGI:3655015 NCBI chr17:39,404,285...39,451,263
Ensembl chr17:39,404,285...39,451,272
JBrowse link
G SNW1 SNW domain containing 1 involved_in IDA (PMID:14985122) UniProt
UniProt
PMID:14985122 NCBI chr14:77,717,599...77,761,156
Ensembl chr14:77,717,599...77,761,207
JBrowse link
G TRIM24 tripartite motif containing 24 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3776949|PMID:18287084) Ensembl
Ensembl
MGI
PMID:18287084 GO_REF:0000107 MGI:3776949 NCBI chr 7:138,460,259...138,589,996
Ensembl chr 7:138,460,259...138,589,996
JBrowse link
vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP24A1 cytochrome P450 family 24 subfamily A member 1 involved_in NAS (PMID:16720713) BHF-UCL
BHF-UCL
PMID:16720713 NCBI chr20:54,143,538...54,173,986
Ensembl chr20:54,153,446...54,173,986
JBrowse link
G PIM1 Pim-1 proto-oncogene, serine/threonine kinase involved_in IMP (PMID:22720752) CACAO
CACAO
PMID:22720752 NCBI chr 6:37,170,152...37,175,428
Ensembl chr 6:37,170,152...37,175,428
JBrowse link
G VDR vitamin D receptor involved_in IDA
IMP
(PMID:16549446)
(PMID:28698609)
BHF-UCL
UniProt
BHF-UCL
UniProt
PMID:16549446 PMID:28698609 NCBI chr12:47,841,537...47,904,994
Ensembl chr12:47,841,537...47,943,048
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19751
    response to stimulus 10172
      response to chemical 5237
        response to nutrient 325
          response to vitamin 190
            cellular response to vitamin 54
              cellular response to L-ascorbic acid 2
              cellular response to biotin 0
              cellular response to cobalamin 0
              cellular response to folic acid 2
              cellular response to vitamin A 1
              cellular response to vitamin B1 1
              cellular response to vitamin B2 0
              cellular response to vitamin B3 1
              cellular response to vitamin B6 0
              cellular response to vitamin D + 37
              cellular response to vitamin E 4
              cellular response to vitamin K + 5
Path 2
Term Annotations click to browse term
  biological_process 19751
    response to stimulus 10172
      response to external stimulus 3582
        cellular response to external stimulus 475
          cellular response to extracellular stimulus 343
            cellular response to nutrient levels 303
              cellular response to nutrient 72
                cellular response to vitamin 54
                  cellular response to L-ascorbic acid 2
                  cellular response to biotin 0
                  cellular response to cobalamin 0
                  cellular response to folic acid 2
                  cellular response to vitamin A 1
                  cellular response to vitamin B1 1
                  cellular response to vitamin B2 0
                  cellular response to vitamin B3 1
                  cellular response to vitamin B6 0
                  cellular response to vitamin D + 37
                  cellular response to vitamin E 4
                  cellular response to vitamin K + 5
paths to the root