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ONTOLOGY REPORT - ANNOTATIONS

Term:cellular response to vitamin
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Accession:GO:0071295 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin stimulus.


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cellular response to vitamin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRIP1 BRCA1 interacting helicase 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:16771696 GO_REF:0000107 RGD:2326085 NCBI chr17:61,679,139...61,863,528
Ensembl chr17:61,679,139...61,863,559 		JBrowse link
cellular response to folic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOLR1 folate receptor alpha involved_in IDA (PMID:14722620) BHF-UCL PMID:14722620 NCBI chr11:72,189,709...72,196,323
Ensembl chr11:72,189,558...72,196,323 		JBrowse link
G FOLR2 folate receptor beta involved_in IEA GOC GO_REF:0000108 NCBI chr11:72,216,794...72,221,950
Ensembl chr11:72,216,601...72,221,950 		JBrowse link
cellular response to L-ascorbic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELN elastin ISO RGD PMID:2859894 RGD:9585689 NCBI chr 7:74,028,173...74,069,907
Ensembl chr 7:74,027,789...74,069,907 		JBrowse link
G LEP leptin involved_in ISO
IEA		 RGD
Ensembl		 PMID:20400526 GO_REF:0000107 RGD:5128594 NCBI chr 7:128,241,278...128,257,629
Ensembl chr 7:128,241,278...128,257,629 		JBrowse link
cellular response to vitamin A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LTC4S leukotriene C4 synthase ISO RGD PMID:12767051 RGD:724432 NCBI chr 5:179,793,986...179,796,647
Ensembl chr 5:179,793,980...179,796,647 		JBrowse link
cellular response to vitamin B1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MDM2 MDM2 proto-oncogene involved_in ISO
IEA		 RGD
Ensembl		 PMID:15656374 GO_REF:0000107 RGD:2317394 NCBI chr12:68,808,172...68,850,686
Ensembl chr12:68,808,177...68,845,544 		JBrowse link
cellular response to vitamin B3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIRT1 sirtuin 1 ISO RGD PMID:23555824 RGD:10047117 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390 		JBrowse link
cellular response to vitamin D term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif 1 ISO RGD PMID:11108265 RGD:9681746 NCBI chr21:26,835,755...26,845,409
Ensembl chr21:26,835,755...26,845,409 		JBrowse link
G ATP2B1 ATPase plasma membrane Ca2+ transporting 1 ISO RGD PMID:11277270 RGD:2317730 NCBI chr12:89,588,049...89,709,366
Ensembl chr12:89,588,049...89,709,366 		JBrowse link
G BGLAP bone gamma-carboxyglutamate protein involved_in ISO
IEA		 RGD
Ensembl		 PMID:3257212 PMID:6607920 GO_REF:0000107 RGD:2316174 RGD:6483560 NCBI chr 1:156,242,184...156,243,317
Ensembl chr 1:156,242,184...156,243,317 		JBrowse link
G CASR calcium sensing receptor involved_in ISO
IEA		 1,25-dihydroxycholecalciferol (calcitriol) RGD
Ensembl		 PMID:21940515 GO_REF:0000107 RGD:7205697 NCBI chr 3:122,183,668...122,291,629
Ensembl chr 3:122,183,668...122,291,629 		JBrowse link
G CYP24A1 cytochrome P450 family 24 subfamily A member 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:28104492 GO_REF:0000107 RGD:151665513 NCBI chr20:54,143,538...54,173,986
Ensembl chr20:54,153,446...54,173,986 		JBrowse link
G FES FES proto-oncogene, tyrosine kinase involved_in IMP (PMID:28389358) ARUK-UCL PMID:28389358 NCBI chr15:90,884,504...90,895,776
Ensembl chr15:90,883,695...90,895,776 		JBrowse link
G FGF23 fibroblast growth factor 23 involved_in ISO
IEA		 RGD
Ensembl		 PMID:23263654 GO_REF:0000107 RGD:10044209 NCBI chr12:4,368,227...4,379,712
Ensembl chr12:4,368,227...4,379,712 		JBrowse link
G FZD1 frizzled class receptor 1 ISO RGD PMID:1334084 RGD:61590 NCBI chr 7:91,264,433...91,271,326
Ensembl chr 7:91,264,433...91,271,326 		JBrowse link
G FZD2 frizzled class receptor 2 ISO RGD PMID:1334084 RGD:61590 NCBI chr17:44,557,484...44,561,262
Ensembl chr17:44,557,484...44,561,262 		JBrowse link
G GDAP1 ganglioside induced differentiation associated protein 1 involved_in ISO
IEA		 RGD
Ensembl		 PMID:25449168 GO_REF:0000107 RGD:12738378 NCBI chr 8:74,350,403...74,488,872
Ensembl chr 8:74,320,613...74,518,007 		JBrowse link
G IL15 interleukin 15 ISO RGD PMID:15637289 RGD:2311387 NCBI chr 4:141,636,583...141,733,987
Ensembl chr 4:141,636,583...141,733,987 		JBrowse link
G ITGB1 integrin subunit beta 1 ISO calcitriol RGD PMID:20304064 RGD:2325261 NCBI chr10:32,900,318...32,958,230
Ensembl chr10:32,887,273...33,005,792 		JBrowse link
G KDM6A lysine demethylase 6A involved_in ISO
IEA		 RGD
Ensembl		 PMID:31907922 GO_REF:0000107 RGD:151665135 NCBI chr  X:44,873,188...45,112,779
Ensembl chr  X:44,873,188...45,112,779 		JBrowse link
G LTBP1 latent transforming growth factor beta binding protein 1 ISO RGD PMID:10025676 RGD:10412059 NCBI chr 2:32,946,953...33,399,509
Ensembl chr 2:32,946,953...33,399,509 		JBrowse link
G MIR125B1 microRNA 125b-1 involved_in IDA (PMID:28389358) ARUK-UCL PMID:28389358 NCBI chr11:122,099,757...122,099,844
Ensembl chr11:122,099,757...122,099,844 		JBrowse link
G MIR125B2 microRNA 125b-2 involved_in IDA (PMID:28389358) ARUK-UCL PMID:28389358 NCBI chr21:16,590,237...16,590,325
Ensembl chr21:16,590,237...16,590,325 		JBrowse link
G MMP1 matrix metallopeptidase 1 ISO RGD PMID:22064970 RGD:7207281 NCBI chr11:102,789,919...102,798,160
Ensembl chr11:102,789,401...102,798,160 		JBrowse link
G NOS2 nitric oxide synthase 2 ISO RGD PMID:18534083 RGD:4891908 NCBI chr17:27,756,766...27,800,529
Ensembl chr17:27,756,766...27,800,529 		JBrowse link
G PDIA3 protein disulfide isomerase family A member 3 ISO RGD PMID:15862831 RGD:9999173 NCBI chr15:43,746,438...43,773,278
Ensembl chr15:43,746,394...43,773,279 		JBrowse link
G PENK proenkephalin involved_in ISO
IEA		 RGD
Ensembl		 PMID:8584038 GO_REF:0000107 RGD:10003035 NCBI chr 8:56,440,957...56,446,641
Ensembl chr 8:56,436,674...56,446,671 		JBrowse link
G PHEX phosphate regulating endopeptidase X-linked involved_in ISO
IEA		 RGD
Ensembl		 PMID:15337762 GO_REF:0000107 RGD:11556251 NCBI chr  X:22,032,325...22,251,310
Ensembl chr  X:22,032,325...22,494,713 		JBrowse link
G PTN pleiotrophin ISO RGD PMID:21153232 RGD:9831436 NCBI chr 7:137,227,341...137,343,733
Ensembl chr 7:137,227,341...137,343,774 		JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in IEP (PMID:16149051) UniProt PMID:16149051 NCBI chr 8:41,261,962...41,309,473
Ensembl chr 8:41,261,962...41,309,473 		JBrowse link
G SULT2A1 sulfotransferase family 2A member 1 ISO RGD PMID:14978251 RGD:2317006 NCBI chr19:47,870,467...47,886,315
Ensembl chr19:47,870,467...47,886,315 		JBrowse link
G TNC tenascin C involved_in ISO
IEA		 RGD
Ensembl		 PMID:10502285 GO_REF:0000107 RGD:4889620 NCBI chr 9:115,019,575...115,118,157
Ensembl chr 9:115,019,575...115,118,207 		JBrowse link
G TREM1 triggering receptor expressed on myeloid cells 1 ISO RGD PMID:29331667 RGD:127284861 NCBI chr 6:41,267,385...41,286,682
Ensembl chr 6:41,267,926...41,286,682 		JBrowse link
G VDR vitamin D receptor ISO RGD PMID:9753201 RGD:8158092 NCBI chr12:47,841,537...47,904,994
Ensembl chr12:47,841,537...47,943,048 		JBrowse link
cellular response to vitamin E term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL1A1 collagen type I alpha 1 chain involved_in ISO
IEA		 RGD
Ensembl		 PMID:23722449 GO_REF:0000107 RGD:8552711 NCBI chr17:50,184,101...50,201,631
Ensembl chr17:50,184,101...50,201,632 		JBrowse link
G COL2A1 collagen type II alpha 1 chain ISO RGD PMID:23722449 RGD:8552711 NCBI chr12:47,972,967...48,006,212
Ensembl chr12:47,972,967...48,004,554 		JBrowse link
G PAWR pro-apoptotic WT1 regulator ISO RGD PMID:10428045 RGD:9835341 NCBI chr12:79,584,879...79,690,964
Ensembl chr12:79,574,979...79,690,964 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma involved_in ISO
IEA		 RGD
Ensembl		 PMID:11752099 GO_REF:0000107 RGD:8553036 NCBI chr 3:12,287,368...12,434,344
Ensembl chr 3:12,287,368...12,434,356 		JBrowse link
cellular response to vitamin K term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL5 C-C motif chemokine ligand 5 ISO menadione (K3) RGD PMID:19291322 RGD:4889997 NCBI chr17:35,871,491...35,880,360
Ensembl chr17:35,871,491...35,880,793 		JBrowse link
G GAS6 growth arrest specific 6 involved_in IDA (PMID:16359517) UniProt PMID:16359517 NCBI chr13:113,820,549...113,864,076
Ensembl chr13:113,820,549...113,864,076 		JBrowse link
G POSTN periostin involved_in IEA
IDA		 (PMID:18450759) Ensembl
UniProt		 PMID:18450759 GO_REF:0000107 NCBI chr13:37,562,585...37,598,768
Ensembl chr13:37,562,583...37,598,844 		JBrowse link
negative regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KANK2 KN motif and ankyrin repeat domains 2 involved_in IMP
IBA		 (PMID:24671081) UniProt
GO_Central		 PMID:24671081 GO_REF:0000033 NCBI chr19:11,164,270...11,197,865
Ensembl chr19:11,164,270...11,197,791 		JBrowse link
G SNAI2 snail family transcriptional repressor 2 involved_in IDA (PMID:19502595) BHF-UCL PMID:19502595 NCBI chr 8:48,917,598...48,921,429
Ensembl chr 8:48,917,598...48,921,740 		JBrowse link
positive regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP27B1 cytochrome P450 family 27 subfamily B member 1 involved_in IDA (PMID:16549446) BHF-UCL PMID:16549446 NCBI chr12:57,762,334...57,767,078
Ensembl chr12:57,762,334...57,768,986 		JBrowse link
G MN1 MN1 proto-oncogene, transcriptional regulator involved_in IDA (PMID:15890672) UniProt PMID:15890672 NCBI chr22:27,748,277...27,801,756
Ensembl chr22:27,748,277...27,801,756 		JBrowse link
G RXRA retinoid X receptor alpha involved_in IDA (PMID:20171278) ComplexPortal PMID:20171278 NCBI chr 9:134,326,455...134,440,585
Ensembl chr 9:134,317,098...134,440,585 		JBrowse link
G RXRB retinoid X receptor beta involved_in ISS ComplexPortal GO_REF:0000114 NCBI chr 6:33,193,588...33,200,853
Ensembl chr 6:33,193,588...33,200,665 		JBrowse link
G SNW1 SNW domain containing 1 involved_in IDA (PMID:11514567), (PMID:9632709) UniProt PMID:9632709 PMID:11514567 NCBI chr14:77,717,599...77,761,156
Ensembl chr14:77,717,599...77,761,207 		JBrowse link
G VDR vitamin D receptor involved_in IDA
ISS		 (PMID:20171278) ComplexPortal PMID:20171278 GO_REF:0000114 NCBI chr12:47,841,537...47,904,994
Ensembl chr12:47,841,537...47,943,048 		JBrowse link
regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16324150) Ensembl
MGI		 PMID:16324150 GO_REF:0000107 NCBI chr17:39,404,285...39,451,263
Ensembl chr17:39,404,285...39,451,272 		JBrowse link
G SNW1 SNW domain containing 1 involved_in IDA (PMID:14985122) UniProt PMID:14985122 NCBI chr14:77,717,599...77,761,156
Ensembl chr14:77,717,599...77,761,207 		JBrowse link
G TRIM24 tripartite motif containing 24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18287084) Ensembl
MGI		 PMID:18287084 GO_REF:0000107 NCBI chr 7:138,460,259...138,589,996
Ensembl chr 7:138,460,259...138,589,996 		JBrowse link
vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP24A1 cytochrome P450 family 24 subfamily A member 1 involved_in NAS (PMID:16720713) BHF-UCL PMID:16720713 NCBI chr20:54,143,538...54,173,986
Ensembl chr20:54,153,446...54,173,986 		JBrowse link
G NCOA3 nuclear receptor coactivator 3 involved_in IDA (PMID:9267036) UniProt PMID:9267036 NCBI chr20:47,501,887...47,656,872
Ensembl chr20:47,501,887...47,656,877 		JBrowse link
G PIM1 Pim-1 proto-oncogene, serine/threonine kinase involved_in IMP (PMID:22720752) CACAO PMID:22720752 NCBI chr 6:37,170,152...37,175,428
Ensembl chr 6:37,170,152...37,175,428 		JBrowse link
G VDR vitamin D receptor involved_in IDA
IMP		 (PMID:16549446)
(PMID:28698609)		 BHF-UCL
UniProt		 PMID:16549446 PMID:28698609 NCBI chr12:47,841,537...47,904,994
Ensembl chr12:47,841,537...47,943,048 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19777
    response to stimulus 10157
      response to nutrient levels 815
        response to nutrient 356
          cellular response to nutrient 84
            cellular response to vitamin 53
              cellular response to L-ascorbic acid 2
              cellular response to biotin 0
              cellular response to cobalamin 0
              cellular response to folic acid 2
              cellular response to vitamin A 1
              cellular response to vitamin B1 1
              cellular response to vitamin B2 0
              cellular response to vitamin B3 1
              cellular response to vitamin B6 0
              cellular response to vitamin D + 38
              cellular response to vitamin E 4
              cellular response to vitamin K + 3
paths to the root