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ONTOLOGY REPORT - ANNOTATIONS

Term:cellular response to vitamin
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Accession:GO:0071295 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin stimulus.

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cellular response to vitamin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRIP1 BRCA1 interacting helicase 1 ISO RGD PMID:16771696 RGD:2326085 NCBI chr16:32,909,226...33,085,551
Ensembl chr16:32,910,693...33,082,587 		JBrowse link
cellular response to folic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOLR1 folate receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:63,405,513...63,413,372
Ensembl chr 1:63,406,597...63,413,352 		JBrowse link
cellular response to L-ascorbic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELN elastin ISO RGD PMID:2859894 RGD:9585689 NCBI chr28:8,999,164...9,048,703 JBrowse link
G LEP leptin ISO RGD PMID:20400526 RGD:5128594 NCBI chr21:97,056,913...97,071,161
Ensembl chr21:97,057,529...97,071,220 		JBrowse link
cellular response to vitamin A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LTC4S leukotriene C4 synthase ISO RGD PMID:12767051 RGD:724432 NCBI chr23:81,523,784...81,526,297
Ensembl chr23:81,523,775...81,526,179 		JBrowse link
cellular response to vitamin B1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MDM2 MDM2 proto-oncogene ISO RGD PMID:15656374 RGD:2317394 NCBI chr11:64,434,203...64,465,490
Ensembl chr11:64,434,261...64,469,890 		JBrowse link
cellular response to vitamin B3 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIRT1 sirtuin 1 ISO RGD PMID:23555824 RGD:10047117 NCBI chr 9:63,463,059...63,497,893
Ensembl chr 9:63,462,389...63,497,867 		JBrowse link
cellular response to vitamin D term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif 1 ISO RGD PMID:11108265 RGD:9681746 NCBI chr 2:65,376,288...65,385,398
Ensembl chr 2:65,376,310...65,385,918 		JBrowse link
G ATP2B1 ATPase plasma membrane Ca2+ transporting 1 ISO RGD PMID:11277270 RGD:2317730 NCBI chr11:84,985,957...85,053,923
Ensembl chr11:84,989,169...85,103,957 		JBrowse link
G BGLAP bone gamma-carboxyglutamate protein ISO RGD PMID:3257212 PMID:6607920 RGD:2316174 RGD:6483560 NCBI chr20:7,623,716...7,626,353
Ensembl chr20:7,623,883...7,624,812 		JBrowse link
G CASR calcium sensing receptor ISO 1,25-dihydroxycholecalciferol (calcitriol) RGD PMID:21940515 RGD:7205697 NCBI chr22:58,579,640...58,612,142
Ensembl chr22:58,578,396...58,604,756 		JBrowse link
G CYP24A1 cytochrome P450 family 24 subfamily A member 1 ISO RGD PMID:28104492 RGD:151665513 NCBI chr 2:9,868,794...9,889,510
Ensembl chr 2:9,868,678...9,885,884 		JBrowse link
G FES FES proto-oncogene, tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:8,967,542...8,979,475
Ensembl chr29:8,965,997...8,979,361 		JBrowse link
G FGF23 fibroblast growth factor 23 ISO RGD PMID:23263654 RGD:10044209 NCBI chr11:4,398,318...4,408,415
Ensembl chr11:4,398,675...4,407,209 		JBrowse link
G FZD1 frizzled class receptor 1 ISO RGD PMID:1334084 RGD:61590 NCBI chr21:57,695,000...57,702,666
Ensembl chr21:57,699,468...57,701,417 		JBrowse link
G FZD2 frizzled class receptor 2 ISO RGD PMID:1334084 RGD:61590 NCBI chr16:61,837,202...61,839,126
Ensembl chr16:61,837,304...61,839,013 		JBrowse link
G GDAP1 ganglioside induced differentiation associated protein 1 ISO RGD PMID:25449168 RGD:12738378 NCBI chr 8:69,948,800...69,965,168
Ensembl chr 8:69,949,052...69,966,421 		JBrowse link
G IL15 interleukin 15 ISO RGD PMID:15637289 RGD:2311387 NCBI chr 7:88,548,773...88,644,977
Ensembl chr 7:88,548,671...88,645,488 		JBrowse link
G ITGB1 integrin subunit beta 1 ISO calcitriol RGD PMID:20304064 RGD:2325261 NCBI chr 9:32,201,030...32,258,247
Ensembl chr 9:32,202,204...32,258,154 		JBrowse link
G KDM6A lysine demethylase 6A ISO RGD PMID:31907922 RGD:151665135 NCBI chr  X:42,053,272...42,291,013
Ensembl chr  X:42,053,336...42,290,526 		JBrowse link
G LTBP1 latent transforming growth factor beta binding protein 1 ISO RGD PMID:10025676 RGD:10412059 NCBI chr14:74,063,258...74,441,042
Ensembl chr14:74,064,087...74,548,825 		JBrowse link
G MMP1 matrix metallopeptidase 1 ISO RGD PMID:22064970 RGD:7207281 NCBI chr 1:94,167,507...94,177,357
Ensembl chr 1:94,167,219...94,176,767 		JBrowse link
G NOS2 nitric oxide synthase 2 ISO RGD PMID:18534083 RGD:4891908 NCBI chr16:21,533,011...21,576,645
Ensembl chr16:21,533,484...21,574,257 		JBrowse link
G PDIA3 protein disulfide isomerase family A member 3 ISO RGD PMID:15862831 RGD:9999173 NCBI chr26:39,273,982...39,300,170
Ensembl chr26:39,272,997...39,349,966 		JBrowse link
G PENK proenkephalin ISO RGD PMID:8584038 RGD:10003035 NCBI chr 8:52,458,113...52,463,933
Ensembl chr 8:52,457,904...52,463,859 		JBrowse link
G PHEX phosphate regulating endopeptidase X-linked ISO RGD PMID:15337762 RGD:11556251 NCBI chr  X:20,507,619...20,733,367
Ensembl chr  X:20,522,498...20,734,599 		JBrowse link
G PTN pleiotrophin ISO RGD PMID:21153232 RGD:9831436 NCBI chr21:105,911,171...106,027,108
Ensembl chr21:105,911,120...106,027,215 		JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:39,243,775...39,289,050
Ensembl chr 8:39,243,780...39,288,984 		JBrowse link
G SULT2A1 sulfotransferase family 2A member 1 ISO RGD PMID:14978251 RGD:2317006 NCBI chr 6:41,160,707...41,175,382
Ensembl chr 6:41,159,978...41,175,300 		JBrowse link
G TNC tenascin C ISO RGD PMID:10502285 RGD:4889620 NCBI chr12:24,457,616...24,556,194
Ensembl chr12:24,457,738...24,556,451 		JBrowse link
G TREM1 triggering receptor expressed on myeloid cells 1 ISO RGD PMID:29331667 RGD:127284861 NCBI chr17:30,873,647...30,885,292
Ensembl chr17:30,873,666...30,886,967 		JBrowse link
G VDR vitamin D receptor ISO RGD PMID:9753201 RGD:8158092 NCBI chr11:44,062,198...44,126,295
Ensembl chr11:44,065,457...44,166,684 		JBrowse link
cellular response to vitamin E term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COL1A1 collagen type I alpha 1 chain ISO RGD PMID:23722449 RGD:8552711 NCBI chr16:43,134,648...43,152,313
Ensembl chr16:43,134,779...43,150,930 		JBrowse link
G COL2A1 collagen type II alpha 1 chain ISO RGD PMID:23722449 RGD:8552711 NCBI chr11:44,196,213...44,227,718
Ensembl chr11:44,196,094...44,227,468 		JBrowse link
G PAWR pro-apoptotic WT1 regulator ISO RGD PMID:10428045 RGD:9835341 NCBI chr11:75,132,547...75,219,633
Ensembl chr11:75,133,186...75,219,072 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma ISO RGD PMID:11752099 RGD:8553036 NCBI chr22:48,262,743...48,407,415
Ensembl chr22:48,275,600...48,407,418 		JBrowse link
cellular response to vitamin K term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL5 C-C motif chemokine ligand 5 ISO menadione (K3) RGD PMID:19291322 RGD:4889997 NCBI chr16:29,351,214...29,361,317 JBrowse link
G GAS6 growth arrest specific 6 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 3:91,720,882...91,738,069 JBrowse link
G LOC103214855 growth arrest-specific protein 6 involved_in ISO (PMID:16359517) UniProt PMID:16359517 NCBI chr 3:91,720,871...91,762,712 JBrowse link
G POSTN periostin involved_in ISO (MGI:3804342|PMID:18450759)
(PMID:18450759)		 UniProt PMID:18450759 MGI:3804342 NCBI chr 3:16,060,013...16,095,867
Ensembl chr 3:16,059,965...16,095,791 		JBrowse link
negative regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KANK2 KN motif and ankyrin repeat domains 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:10,095,319...10,131,985
Ensembl chr 6:10,095,246...10,131,946 		JBrowse link
G SNAI2 snail family transcriptional repressor 2 involved_in ISO (PMID:19502595) BHF-UCL PMID:19502595 NCBI chr 8:45,043,381...45,047,054
Ensembl chr 8:45,043,393...45,046,978 		JBrowse link
positive regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP27B1 cytochrome P450 family 27 subfamily B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:53,675,704...53,681,372
Ensembl chr11:53,675,226...53,680,443 		JBrowse link
G MN1 MN1 proto-oncogene, transcriptional regulator involved_in ISO (PMID:15890672) UniProt PMID:15890672 NCBI chr19:10,652,940...10,706,989
Ensembl chr19:10,652,939...10,706,762 		JBrowse link
G RXRA retinoid X receptor alpha involved_in ISO (PMID:20171278) ComplexPortal PMID:20171278 NCBI chr12:3,704,129...3,814,707
Ensembl chr12:3,699,923...3,814,678 		JBrowse link
G SNW1 SNW domain containing 1 involved_in ISO (PMID:11514567), (PMID:9632709) UniProt PMID:9632709 PMID:11514567 NCBI chr24:54,976,597...55,020,051
Ensembl chr24:54,977,083...55,019,988 		JBrowse link
G VDR vitamin D receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:44,062,198...44,126,295
Ensembl chr11:44,065,457...44,166,684 		JBrowse link
regulation of vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MED1 mediator complex subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16324150) Ensembl
MGI		 PMID:16324150 GO_REF:0000107 NCBI chr16:66,719,393...66,764,902
Ensembl chr16:66,719,423...66,762,896 		JBrowse link
G SNW1 SNW domain containing 1 involved_in ISO (PMID:14985122) UniProt PMID:14985122 NCBI chr24:54,976,597...55,020,051
Ensembl chr24:54,977,083...55,019,988 		JBrowse link
G TRIM24 tripartite motif containing 24 acts_upstream_of_or_within ISO (PMID:18287084) MGI PMID:18287084 NCBI chr21:107,166,180...107,291,897
Ensembl chr21:107,166,395...107,295,736 		JBrowse link
vitamin D receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NCOA3 nuclear receptor coactivator 3 involved_in ISO (PMID:9267036) UniProt PMID:9267036 NCBI chr 2:16,270,218...16,423,381
Ensembl chr 2:16,273,717...16,423,318 		JBrowse link
G PIM1 Pim-1 proto-oncogene, serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:34,968,661...34,973,920
Ensembl chr17:34,968,429...34,973,760 		JBrowse link
G VDR vitamin D receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:44,062,198...44,126,295
Ensembl chr11:44,065,457...44,166,684 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17080
    response to stimulus 8697
      response to nutrient levels 780
        response to nutrient 334
          cellular response to nutrient 80
            cellular response to vitamin 50
              cellular response to L-ascorbic acid 2
              cellular response to biotin 0
              cellular response to cobalamin 0
              cellular response to folic acid 1
              cellular response to vitamin A 1
              cellular response to vitamin B1 1
              cellular response to vitamin B2 0
              cellular response to vitamin B3 1
              cellular response to vitamin B6 0
              cellular response to vitamin D + 35
              cellular response to vitamin E 4
              cellular response to vitamin K + 4
paths to the root