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ONTOLOGY REPORT - ANNOTATIONS


Term:translocon complex
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Accession:GO:0071256 term browser browse the term
Definition:A protein complex that constitutes a specific site of protein translocation across the endoplasmic reticulum, which involves the signal recognition particle receptor. The complex contains a core heterotrimer of alpha, beta and gamma subunits, and may contain additional proteins.
Synonyms:narrow_synonym: Sec complex-associated translocon complex
 alt_id: GO:0031206


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Sec61 translocon complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl6ip1 ADP-ribosylation factor like GTPase 6 interacting protein 1 part_of IBA
ISO
PMID:21873635
(MGI:1858942|PMID:10508919)
RGD PMID:10508919, PMID:21873635 MGI:1858942, RGD:13792537 NCBI chr 1:187,770,160...187,779,675
Ensembl chr 1:187,770,160...187,779,675
JBrowse link
G Sec61a1 SEC61 translocon subunit alpha 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:120,453,577...120,467,932
Ensembl chr 4:120,453,581...120,467,932
JBrowse link
G Sec61a2 SEC61 translocon subunit alpha 2 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:76,358,947...76,385,860
Ensembl chr17:76,358,944...76,385,103
JBrowse link
G Sec61b SEC61 translocon subunit beta part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:63,192,322...63,200,532
Ensembl chr 5:63,192,298...63,200,508
JBrowse link
G Ssr3 signal sequence receptor subunit 3 NAS RGD PMID:7916687 RGD:61758 NCBI chr 2:156,010,997...156,023,853
Ensembl chr 2:156,011,002...156,014,527
JBrowse link
G Ssr4 signal sequence receptor subunit 4 IDA RGD PMID:7916687 RGD:61758 NCBI chr  X:156,995,763...156,999,702
Ensembl chr  X:156,995,779...156,999,650
JBrowse link
Ssh1 translocon complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07028668.1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr17:79,829,305...79,829,511 JBrowse link
G AABR07041141.1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:120,521,665...120,521,871 JBrowse link
G AABR07048012.1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:56,751,657...56,753,832 JBrowse link
G AABR07048013.1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:56,769,347...56,771,522 JBrowse link
G LOC100362376 LRRGT00025-like part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:120,521,595...120,521,921 JBrowse link
G LOC108348617 protein transport protein Sec61 subunit gamma pseudogene part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:79,829,305...79,829,511 JBrowse link
G LOC499136 LRRGT00021 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:97,783,806...97,785,490
Ensembl chr 1:97,783,806...97,785,490
JBrowse link
G Sec61g SEC61 translocon subunit gamma part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:99,774,589...99,780,964
Ensembl chr14:99,774,589...99,780,964
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20011
    protein-containing complex 6011
      endoplasmic reticulum protein-containing complex 139
        translocon complex 14
          Sec61 translocon complex 6
          Ssh1 translocon complex 8
Path 2
Term Annotations click to browse term
  cellular_component 20011
    cellular anatomical entity 19715
      intracellular anatomical structure 14392
        intracellular organelle 12747
          intracellular membrane-bounded organelle 11193
            endoplasmic reticulum 1757
              endoplasmic reticulum subcompartment 961
                endoplasmic reticulum membrane 951
                  rough endoplasmic reticulum membrane 53
                    translocon complex 14
                      Sec61 translocon complex 6
                      Ssh1 translocon complex 8
paths to the root